cluster # 5699

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Anopheles gambiae
cluster # 5699 cluster # 5699 Sequences # 4 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5699#0 length = 1072 sequences # 2

consensus_5699#1 length = 613 sequences # 2

consensusID : consensus_5699#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1072
fasta sequence

                              [CCGCGGACGCGTGGGGTTCGCCAACCTGGACGTGTGGAAGTCGGTGCCGGAGCAGGACCGGCGCGACATCTACGAGGACTGCATCTTCAACCTGGCCAAGCGGGAAAAGGAGGAGGCGCGGGTGATGAAGAAGCGTAACATGCGCGTGTTGGGCGAGCTGCTCGAGGCGATGACGACCGTCACGTACCAGACGACCTGGTCCGAGGCGCAGGTAATGCTGCTGGACAATGCGTCGTTCAAGAACGACGTCAACCTGCTCGGCATGGACAAGGAGGACGCACTGATCGTGTTCGAGGAGCACATCCGCGGGCTGGAGCGCGAGGAGGACGAGGAGAAGGAGCGCGAGAAGAAGCGGCTCAAGCGGCAGCAGCGCAAAAACCGCGACCAATTCCTCGCCCTGCTCGACACGCTGCACGAGGAGGGCAAGCTGACGTCGATGTCGCTGTGGGTGGAGCTGTACCCGCTCATATCGGCCGACCTGCGCTTCTCCGCCATGCTCGGGCAGCCCGGCTCGACGCCGCTGGATCTGTTCAAGTTCTACGTGGAAAACCTGAAGGCCCGGTTCCACGACGAGAAGAAAATCATCAAGGAAATACTGAAGGAGAAAGAGTTCATCGTGGTGCGGACGACCACGTTCGAGGACTTTGCGACCGTCGTGTGCGAGGACAAGCGGTCGGCAACGCTGGACGCGGGCAACGTGAAGCTGACGTACAACTCGCTGCTGGAGAAGGCAGTCGCGGCCGAGAAGGAGCGGCTGAAGGAGGAAACGCGCCGCATCCGCAAGCTCGAGAACGAGCTGAAGGGTGTGTGGATCGAGGCGGGCCTGTCCGGTGTCGACAGCTGGGAGACGGCCCAGAAGCTCGTCATGGACCGGGAGGTGTACGACCTGTACGAGAAGGAGGATAAGGTCGAGCGGCTGTGGGAAGACTTTGTGAAGGAGACGGAAGATTCCTGCAGCCACCATCATTCGCGTTCGAAAAAGTCGAAAAAGAGTCGAAAGCACAAGAAAAAATCGCGCTCCTCGTCCAAATCGCTCTCGGAAGCATCGGAAGTGGAGTATGAAAAGCCTTCG]

[+] EMBL BM608676             [CCGCGGACGCGTGGGGTTCGCCAACCTGGACGTGTGGAAGTCGGTGCCGGAGCAGGACCGGCGCGACATCTACGAGGACTGCATCTTCAACCTGGCCAAGCGGGAAAAGGAGGAGGCGCGGGTGATGAAGAAGCGTAACATGCGCGTGTTGGGCGAGCTGCTCGAGGCGATGACGACCGTCACGTACCAGACGACCTGGTCCGAGGCGCAGGTAATGCTGCTGGACAATGCGTCGTTCAAGAACGACGTCAACCTGCTCGGCATGGACAAGGAGGACGCACTGATCGTGTTCGAGGAGCACATCCGCGGGCTGGAGCGCGAGGAGGACGAGGAGAAGGAGCGCGAGAAGAAGCGGCTCAAGCGGCAGCAGCGCAAAAACCGCGACCAATTCCTCGCCCTGCTCGACACGCTGCACGAGGAGGGCAAGCTGACGTCGATGTCGCTGTGGGTGGAGCTGTACCCGCTCATATCGGCCGACCTGCGCTTCTCCGCCATGCTCGGGCAGCCCGGCTCGACGCCGCTGGATCTGTTCAAGTTCTACGTGGAAAACCTGAAGGCCCGGTTCCACGACGAGAAGAAAATCATCAAGGAAATACTGAAGGAGAAAGAGTTCATCGTGGTGCGGACGACCACGTTCGAGGACTTTGCGACCGTCGTGTGCGAGGACAAGCGGTCGGCAACGCTGGACGCG                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM653792             [                                                                                                                                                                                                                                                                                                                                                                                             ccgCCAATTCCTCGCCCTGCTCGACACGCTGCACGAGGAGGGCAAGCTGACGTCGATGTCGCTGTGGGTGGAGCTGTACCCGCTCATATCGGCCGACCTGCGCTTCTCCGCCATGCTCGGGCAGCCCGGCTCGACGCCGCTGGATCTGTTCAAGTTCTACGTGGAAAACCTGAAGGCCCGGTTCCACGACGAGAAGAAAATCATCAAGGAAATACTGAAGGAGAAAGAGTTCATCGTGGTGCGGACGACCACGTTCGAGGACTTTGCGACCGTCGTGTGCGAGGACAAGCGGTCGGCAACGCTGGACGCGGGCAACGTGAAGCTGACGTACAACTCGCTGCTGGAGAAGGCAGTCGCGGCCGAGAAGGAGCGGCTGAAGGAGGAAACGCGCCGCATCCGCAAGCTCGAGAACGAGCTGAAGGGTGTGTGGATCGAGGCGGGCCTGTCCGGTGTCGACAGCTGGGAGACGGCCCAGAAGCTCGTCATGGACCGGGAGGTGTACGACCTGTACGAGAAGGAGGATAAGGTCGAGCGGCTGTGGGAAGACTTTGTGAAGGAGACGGAAGATTCCTGCAGCCACCATCATTCGCGTTCGAAAAAGTCGAAAAAGAGTCGAAAGCACAAGAAAAAATCGCGCTCCTCGTCCAAATCGCTCTCGGAAGCATCGGAAGTGGAGTATGAAAAGCCTTCG]




>consensus_5699#0
CCGCGGACGCGTGGGGTTCGCCAACCTGGACGTGTGGAAGTCGGTGCCGGAGCAGGACCG
GCGCGACATCTACGAGGACTGCATCTTCAACCTGGCCAAGCGGGAAAAGGAGGAGGCGCG
GGTGATGAAGAAGCGTAACATGCGCGTGTTGGGCGAGCTGCTCGAGGCGATGACGACCGT
CACGTACCAGACGACCTGGTCCGAGGCGCAGGTAATGCTGCTGGACAATGCGTCGTTCAA
GAACGACGTCAACCTGCTCGGCATGGACAAGGAGGACGCACTGATCGTGTTCGAGGAGCA
CATCCGCGGGCTGGAGCGCGAGGAGGACGAGGAGAAGGAGCGCGAGAAGAAGCGGCTCAA
GCGGCAGCAGCGCAAAAACCGCGACCAATTCCTCGCCCTGCTCGACACGCTGCACGAGGA
GGGCAAGCTGACGTCGATGTCGCTGTGGGTGGAGCTGTACCCGCTCATATCGGCCGACCT
GCGCTTCTCCGCCATGCTCGGGCAGCCCGGCTCGACGCCGCTGGATCTGTTCAAGTTCTA
CGTGGAAAACCTGAAGGCCCGGTTCCACGACGAGAAGAAAATCATCAAGGAAATACTGAA
GGAGAAAGAGTTCATCGTGGTGCGGACGACCACGTTCGAGGACTTTGCGACCGTCGTGTG
CGAGGACAAGCGGTCGGCAACGCTGGACGCGGGCAACGTGAAGCTGACGTACAACTCGCT
GCTGGAGAAGGCAGTCGCGGCCGAGAAGGAGCGGCTGAAGGAGGAAACGCGCCGCATCCG
CAAGCTCGAGAACGAGCTGAAGGGTGTGTGGATCGAGGCGGGCCTGTCCGGTGTCGACAG
CTGGGAGACGGCCCAGAAGCTCGTCATGGACCGGGAGGTGTACGACCTGTACGAGAAGGA
GGATAAGGTCGAGCGGCTGTGGGAAGACTTTGTGAAGGAGACGGAAGATTCCTGCAGCCA
CCATCATTCGCGTTCGAAAAAGTCGAAAAAGAGTCGAAAGCACAAGAAAAAATCGCGCTC
CTCGTCCAAATCGCTCTCGGAAGCATCGGAAGTGGAGTATGAAAAGCCTTCG

consensusID : consensus_5699#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 613
fasta sequence

                              [CCGGAGGAATCCCAGCCGGGCCAAACGGACGAGGAGCCGGCCATGGAGTTTAAGGACAAAAAGGAAGCGATCGAAGCGTTCAAGGAGTTCCTGAAGGAGCGCAACATCCCCTCGAGCTCGTCCTGGGAGCAGTGCGTAAAGATCATCCAGAAGGATCCGAAGTTTAACGTGTTCAAGAAGCTGAGCGAAAAGAAGCAAGCGTTCAACGCGTACAAAACGCAGAAGCTAAAG---GAGCGCGAGGAGCAGCGGCTGAAGGCGAAGCGGTCGAAGGAGGAGCTGGAAAAGTTCCTCATGTCCTCGGACAAGATGAACTCGGCGCTCAAGTTTTACCGGTGCGACGAGCTGTTCGCCAACCTGGACGTGTGGAAGTCGGTGCCGGAGCAGGACCGGCGCGACATCTACGAGGACTGCATCTTCAACCTGGCCAAGCGGGAAAAGGAGGAGGCGCGGGTGATGAAGGAGCGTAACATGCGCGTGTTGGGCGAGCTGCTCGAGGCGATGACGACCGTCACGTACCAGACGACCTGGTCCGAGGCGCAGGTAATGCTGCTGGACAATGCGTCGTTCAAGAACGACGTCAACCTGCTCGGCATGGACAAGGAGGACGCACTGA]

[+] EMBL BM595978             [CCGGAGGAATCCCAGCCGGGCCAAACGGACGAGGAGCCGGCCATGGAGTTTAAGGACAAAAAGGAAGCGATCGAAGCGTTCAAGGAGTTCCTGAAGGAGCGCAACATCCCCTCGAGCTCGTCCTGGGAGCAGTGCGTAAAGATCATCCAGAAGGATCCGAAGTTTAACGTGTTCAAGAAGCTGAGCGAAAAGAAGCAAGCGTTCAACGCGTACAAAACGCAGAAGCTAAAG   GAGCGCGAGGAGCAGCGGCTGAAGGCGAAGCGGTCGAAGGAGGAGCTGGAAAAGTTCCTCATGTCCTCGGACAAGATGAACTCGGCGCTCAAGTTTTACCGGTGCGACGAGCTGTTCGCCAACCTGGACGTGTGGAAGTCGGTGCCGGAGCAGGACCGGCGCGACATCTACGAGGACTGCATCTTCAACCTGGCCAAGCGGGAAAAGGAGGAGGCGCGGGTGATGAAGGAGCGTAACATGCGCGTGTTGGGCGAGCTGCTCGAGGCGATGACGACCGTCACGTACCAGACGACCTGGTCCGAGGCGCAGGTAATGCTGCTGGACAAT                                                       ]
[+] EMBL BM644128             [                                                                 ccgGATCGAAGCGTTCAAGGAGTTCCTGAAGGAGCGCAACATCCCCTCGAGCTCGTCCTGGGAGCAGTGCGTAAAGATCATCCAGAAGGATCCGAAGTTTAACGTGTTCAAGAAGCTGAGCGAAAAGAAGCAAGCGTTCAACGCGTACAAAACGCAGAAGCTAAAGGACGAGCGCGAGGAGCAGCGGCTGAAGGCGAAGCGGTCGAAGGAGGAGCTGGAAAAGTTCCTCATGTCCTCGGACAAGATGAACTCGGCGCTCAAGTTTTACCGGTGCGACGAGCTGTTCGCCAACCTGGACGTGTGGAAGTCGGTGCCGGAGCAGGACCGGCGCGACATCTACGAGGACTGCATCTTCAACCTGGCCAAGCGGGAAAAGGAGGAGGCGCGGGTGATGAAGAAGCGTAACATGCGCGTGTTGGGCGAGCTGCTCGAGGCGATGACGACCGTCACGTACCAGACGACCTGGTCCGAGGCGCAGGTAATGCTGCTGGACAATGCGTCGTTCAAGAACGACGTCAACCTGCTCGGCATGGACAAGGAGGACGCACTGA]




>consensus_5699#1
CCGGAGGAATCCCAGCCGGGCCAAACGGACGAGGAGCCGGCCATGGAGTTTAAGGACAAA
AAGGAAGCGATCGAAGCGTTCAAGGAGTTCCTGAAGGAGCGCAACATCCCCTCGAGCTCG
TCCTGGGAGCAGTGCGTAAAGATCATCCAGAAGGATCCGAAGTTTAACGTGTTCAAGAAG
CTGAGCGAAAAGAAGCAAGCGTTCAACGCGTACAAAACGCAGAAGCTAAAGGAGCGCGAG
GAGCAGCGGCTGAAGGCGAAGCGGTCGAAGGAGGAGCTGGAAAAGTTCCTCATGTCCTCG
GACAAGATGAACTCGGCGCTCAAGTTTTACCGGTGCGACGAGCTGTTCGCCAACCTGGAC
GTGTGGAAGTCGGTGCCGGAGCAGGACCGGCGCGACATCTACGAGGACTGCATCTTCAAC
CTGGCCAAGCGGGAAAAGGAGGAGGCGCGGGTGATGAAGGAGCGTAACATGCGCGTGTTG
GGCGAGCTGCTCGAGGCGATGACGACCGTCACGTACCAGACGACCTGGTCCGAGGCGCAG
GTAATGCTGCTGGACAATGCGTCGTTCAAGAACGACGTCAACCTGCTCGGCATGGACAAG
GAGGACGCACTGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5699#0      CCGCGGACGCGTGGGGTTCGCCAACCTGGACGTGTGGAAGTCGGTGCCGGAGCAGGACCG 60
consensus_5699#1      ------------------------------------------------------------
                                                                                  

consensus_5699#0      GCGCGACATCTACGAGGACTGCATCTTCAACCTGGCCAAGCGGGAAAAGGAGGAGGCGCG 120
consensus_5699#1      -------------CCGGA--GGAATCCCAGCCGGGCCAAACGG----ACGAGGAGCCGGC 41
                                     ***  * *    ** ** ****** ***    * ****** **  

consensus_5699#0      GGTGATGAAGAAGCGTAACATGCGCGTGTTGGGCGAGCTGCTCGAGGCGATGACG-ACCG 179
consensus_5699#1      CATGGAGTTTAAGGACAAAAAGGAAGCGATCGAAGCGTTCAAGGAGTTCCTGAAGGAGCG 101
                        **  *   ***   ** * *   * * * *  * * *    ***    *** * * **

consensus_5699#0      TCACGTACCAGACGACCTGGTCCGAGGCGCAG---GTAATGCTGCTGGACAATGCGTCGT 236
consensus_5699#1      CAACATCCCCT-CGAGCTCGTCCTGGGAGCAGTGCGTAAAGATCATCCAGAAGGATCCGA 160
                        ** * **   *** ** ****  ** ****   **** * *  *  * ** *   ** 

consensus_5699#0      TCAAGAACGACGTCAACCTGCTCGGCATGGACAAGGAGGACGCACTGATCGTGTTCGAGG 296
consensus_5699#1      AGTTTAACGTGTTCAAGAAGCTGAGC---GAAAAGAAGCAAGCGTTCAACGCGTACAAAA 217
                           ****   ****   ***  **   ** *** ** * **  * * ** ** * *  

consensus_5699#0      AGCACATCCGCGGGCTGGAGCGCGAGGAGGACGAGGAGAAGGAGCGCGAGAAGAAGCGGC 356
consensus_5699#1      CGCA------------GAAGCTAAAGGAGCGCGAGGAGCAGCGGCTGAAGGCGAAGCGGT 265
                       ***            * ***   *****  ******* **  **   **  ******* 

consensus_5699#0      TCAAGCGGCAGCAGCGCAAAAACCGCGACCAATTCCTCGCCCTGCTCGACACGCTGCACG 416
consensus_5699#1      CGAAGGAGGAGCTG------------GAAAAGTTCCTCATGTCCTCGGACAAGATGAACT 313
                        ***  * *** *            **  * ******         **** * ** ** 

consensus_5699#0      AGGAGGGCAAGCTGACGTCGATGTCGCTGTGGGTGGAGCTGTACCCGCTCATATCGGCCG 476
consensus_5699#1      CGGCGCTCAAGTTT-TACCGGTGCGAC--------GAGCTGT--TCGCCAACCTGG---- 358
                       ** *  **** *     ** **   *        *******   ***  *  * *    

consensus_5699#0      ACCTGCGCTTCTCCGCCATGCTCGGGCAGCCCGGCTCGACGCCGCTGGATCTGTTCAAGT 536
consensus_5699#1      ACGTGTGGAAGTCGG---TGCCGGAGCAG----GACCGGCGC-----GACATCTACGAGG 406
                      ** ** *    ** *   ***  * ****    *  ** ***     **  * * * ** 

consensus_5699#0      TCTACGTGGAAAACCTGAAGGCCCGGTTCCACGACGAGAAGAAAATCATCAAGGAAATAC 596
consensus_5699#1      ACTGCATCTTCAACCTG---GCCAAG---CGGGAAAAGGAGGAGGC------GCGGGTGA 454
                       ** * *    ******   ***  *   *  **  ** ** *         *    *  

consensus_5699#0      TGAAGGAGAAAGAGTTCATCGTGGTGCGGACGACCACGTTCGAGGACTTTGCGACCGTCG 656
consensus_5699#1      TGAAGGAGCGTAACATGCGCGTGTT--GGGCGAGC-TGCTCGAGGCGATGACGACCGTCA 511
                      ********    *  *   **** *  ** *** *  * ******   *  ******** 

consensus_5699#0      TGTGCGAGGACAAGCGGTCGGCAACGCTGGACGCGGGCAACGTGAAGCTGACGTACAACT 716
consensus_5699#1      CGTACCAGACGACCTGGTCCG-------AGGCGCAGGTAATG-----CTGCTGGACAATG 559
                       ** * **   *   **** *        * *** ** ** *     ***  * ****  

consensus_5699#0      CGCTGCTGGAGAAGGCAGTCGCGGCCGAGAAGGAGCGGCTGAAGGAGGAAACGCGCCGCA 776
consensus_5699#1      CGTCGTTCAAGAACGACGTCA--ACCTGCTCGGCATGGAC-AAGGAGGA--CGCACTGA- 613
                      **  * *  **** *  ***    **     **   **   ********  *** * *  

consensus_5699#0      TCCGCAAGCTCGAGAACGAGCTGAAGGGTGTGTGGATCGAGGCGGGCCTGTCCGGTGTCG 836
consensus_5699#1      ------------------------------------------------------------
                                                                                  

consensus_5699#0      ACAGCTGGGAGACGGCCCAGAAGCTCGTCATGGACCGGGAGGTGTACGACCTGTACGAGA 896
consensus_5699#1      ------------------------------------------------------------
                                                                                  

consensus_5699#0      AGGAGGATAAGGTCGAGCGGCTGTGGGAAGACTTTGTGAAGGAGACGGAAGATTCCTGCA 956
consensus_5699#1      ------------------------------------------------------------
                                                                                  

consensus_5699#0      GCCACCATCATTCGCGTTCGAAAAAGTCGAAAAAGAGTCGAAAGCACAAGAAAAAATCGC 1016
consensus_5699#1      ------------------------------------------------------------
                                                                                  

consensus_5699#0      GCTCCTCGTCCAAATCGCTCTCGGAAGCATCGGAAGTGGAGTATGAAAAGCCTTCG 1072
consensus_5699#1      --------------------------------------------------------