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Anopheles gambiae
cluster # 5714 cluster # 5714       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5714#0 length = 1306 sequences # 4  

consensusID : consensus_5714#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1306
fasta sequence
                              [CCGGCTCGCGCTGCCGGGCGCTGGAGAAGAGAAAACTCTCGCCGGACTGCTCTGTGCAAAACATTGGACCAACCGAAGAAGGGTGGTTTGGTGCAGAATTTTCAACACGCAGGAAAAACGAACAACATTACCCGTGGTACTGCGATATCGACCGACCGACATAGTGCTTTTCGTCGCGGCGTAATCGCTCTCACTACTGCGCTGGGTTTGGTGCTTTGTTCTGTTGGGGACTTGCTGGTGCTGTGGTGTCGCGGGCTTGGTTGAGAGGTGTAAAAAAGCTAGTGCCACTTGGATTGTTTTCGTGTCGTATGCGGATGATAAAGAAGCGTAGCCCTCCCGCTGGTTCGGTTTCGATTCGTCCAAAAGGGCCCATTTGTGGCTGTGCGTGAGTGTTGGTTGTGCAGGGCGTGCGAGCGGGCCGAAGAGAGAAAGTTTGGGGTTGCGGTGTGTGTCCCCTTGCGGAAGGCAAAACCTGTGTGCGTGTGTGTGTGTTTTGTGATATTCTTCTACCTTTTAGTGAACGATTGCAACCCCC-TTCCACCAACATTCCAAGTTGCGGAAAAGAAATAATTGCTGTCTATTGAACAGTACTA-CCCGTGCCACCAC--CCCCCGTTCTGCCCTTCCGCCCGTGTTAGTGTGCCATTCTCTTTTGCAACCCTCCCCACCCCCCCCCCCACCCTCCCCTCTCGACGCGAGTGTGTAGTTTTGCGCAATAAAAAAAAGTGATGCGGGACCTGGCTAATAAGATGGCCGAACTCAAATTCGAGGCACCATTGGCACAGTTCGAGGAGAGCGACGAGTGGGGCCCGGTCGAGTACCAGTCCTCGAATGTGGCCAACGGCAAAACGGCGGCCGTAACCATCAGCGACACGCTGAATCTGAACAATCTGAAAGAATCGCTCCGTTCGCTCGACGGCAACCAGCAGCAGCAGCAGCAGAACCAGAAGGATGACGACTTGAACGAGCTGAACGACAACCTGCTGCTCGGGGACGACACGGTGCGGGGTGGGGGCGACTCGAACACCACCACCACCACCACCACTGCCAACAACAACAACAACATTAAGGTGGGACCGATCAAAGACAACGTCGACTTTGCGGAAGCGTTCACCGGCAGTCTGGAGGATTTGGTCAACACGTTCGACGAGAAGATCACGAAATGCTTCGGCAACTACGAGCAGTCGGTGGAGGAGCTGGCCCCGGTGCAGGTCCGCTCGCAGGAGGAAATCATGAACGAGTGCCAGATGTGGTGGACTATTACGGGCAACTTTGGCAACATTCTACCGATCGATTGGTCGAAAACGTA]

[+] EMBL BM633718             [CCGGCTCGCGCTGCCGGGCGCTGGAGAAGAGAAAACTCTCGCCGGACTGCTCTGTGCAAAACATTGGACCAACCGAAGAAGGGTGGTTTGGTGCAGAATTTTCAACACGCAGGAAAAACGAACAACATTACCCGTGGTACTGCGATATCGACCGACCGACATAGTGCTTTTCGTCGCGGCGTAATCGCTCTCACTACTGCGCTGGGTTTGGTGCTTTGTTCTGTTGGGGACTTGCTGGTGCTGTGGTGTCGCGGGCTTGGTTGAGAGGTGTAAAAAAGCTAGTGCCACTTGGATTGTTTTCGTGTCGTATGCGGATGATAAAGAAGCGTAGCCCTCCCGCTGGTTCGGTTTCGATTCGTCCAAAAGGGCCCATTTGTGGCTGTGCGTGAGTGTTGGTTGTGCAGGGCGTGCGAGCGGGCCGAAGAGAGAAAGTTTGGGGTTGCGGTGTGTGTCCCCTTGCGGAAGGCAAAACCTGTGTGCGTGTGTGTGTGTTTTGTGATATTCTTCTACCTTTTAGTGAACGATTGCAACCCCC TTCCACCAACATTCCAAGTTGCGGAAAAGAAATAATTGCTGTCTATTGAACAGTACTA CCCGTGCCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM607246             [                                                                                                                                   CCGCGG AC GCGTGGGCGACCGACCGACATAGTGCTTTTCGTCGCGGCGTAATCGCTCTCACTACTGCGCTGGGTTTGGTGCTTTGTTCTGTTGGGGACTTGCTGGTGCTGTGGTGTCGCGGGCTTGGTTGAGAGGTGTAAAAAAGCTAGTGCCACTTGGATTGTTTTCGTGTCGTATGCGGATGATAAAGAAGCGTAGCCCTCCCGCTGGTTCGGTTTCGATTCGTCCAAAAGGGCCCATTTGTGGCTGTGCGTGAGTGTTGGTTGTGCAGGGCGTGCGAGCGGGCCGAAGAGAGAAAGTTTGGGGTTGCGGTGTGTGTCCCCTTGCGGAAGGCAAAACCTGTGTGCGTGTGTGTGTGTTTTGTGATATTCTTCTACCTTTTAGTGAACGATTGCAACCCCC TTCCACCAACATTCCAAGTTGCGGAAAAGAAATAATTGCTGTCTATTGAAAGGTACTACCCCGTGCCACCAC  CCCCCGTTCTGCCCTTCCTCCCGTGTTAGTGTGCCATTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM626384             [                                                                                                                                                                                                                                                                              ccgAAAAGCTAGTGCCACTTGGATTGTTTTCGTGTCGTATGCGGATGATAAAGAAGCGTAGCCCTCCCGCTGGTTCGGTTTCGATTCGTCCAAAAGGGCCCATTTGTGGCAGTGCGTGAGTGTTGGTTGTGCAGGGCGTGCGAGCGGGCCGAAGAGAGAAAGTTTGGGGTTGCGGTGTGTGTCCCCTTGCGGAAGGCAAAACGTGTGTGCGTGTGTGTGTGTTTTGTGATATTCTTCTACCTTTTAGTGAATGATTCCAACCCCCTTTCCTCCAACATTCCAAGTTACGGAAAAGAAATAATTGCTGTCTATTGAACAGTACTA CCCGTGCCACCACCTCCCCCGTTCGGCCCTTCCGCCCGTGTTAGTGTGCCATTCTCTTTTGCAACCCTCCCCACCCCCCCCCCCACCCTCCCCTCTCGACGCGAGTGTGTAGTTTTGCGCAATAAAAAAAAGTGATGCGGGACCTGGCTAATAAGATGGCCGAACTCAAATTCGAGGCACCATTGGCACAGTTCGAGGAGAGCGACGAGTGGGGCCCGGTCGAGTACCAGTCCTCGAATGTGGCCAACGGCAAAACGGCGGCCGTAACCATCAGCGACACGCTGAATCTGAACAATCTGAAAGAATCGCTCCGTTCGCTCGACGGCAACCAGCAGCAGCAGCAGCAGAACCAG                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM597134             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccgCGCCCGTGTTAGTGTGCCATTCTC TTTGCAA CCTCCCCACCCCCCCCCCCACCCTCCCCTCTCGACGCGAGTGTGTAGTTTTGCGCAATAAAAAAAAGTGATGCGGGACCTGGCTAATAAGATGGCCGAACTCAAATTCGAGGCACCATTGGCACAGTTCGAGGAGAGCGACGAGTGGGGCCCGGTCGAGTACCAGTCCTCGAATGTGGCCAACGGCAAAACGGCGGCCGTAACCATCAGCGACACGCTGAATCTGAACAATCTGAAAGAATCGCTCCGTTCGCTCGACGGCAACCAGCAGCAGCAGCAGCAGAACCAGAAGGATGACGACTTGAACGAGCTGAACGACAACCTGCTGCTCGGGGACGACACGGTGCGGGGTGGGGGCGACTCGAACACCACCACCACCACCACCACTGCCAACAACAACAACAACATTAAGGTGGGACCGATCAAAGACAACGTCGACTTTGCGGAAGCGTTCACCGGCAGTCTGGAGGATTTGGTCAACACGTTCGACGAGAAGATCACGAAATGCTTCGGCAACTACGAGCAGTCGGTGGAGGAGCTGGCCCCGGTGCAGGTCCGCTCGCAGGAGGAAATCATGAACGAGTGCCAGATGTGGTGGACTATTACGGGCAACTTTGGCAACATTCTACCGATCGATTGGTCGAAAACGTA]


>consensus_5714#0 CCGGCTCGCGCTGCCGGGCGCTGGAGAAGAGAAAACTCTCGCCGGACTGCTCTGTGCAAA ACATTGGACCAACCGAAGAAGGGTGGTTTGGTGCAGAATTTTCAACACGCAGGAAAAACG AACAACATTACCCGTGGTACTGCGATATCGACCGACCGACATAGTGCTTTTCGTCGCGGC GTAATCGCTCTCACTACTGCGCTGGGTTTGGTGCTTTGTTCTGTTGGGGACTTGCTGGTG CTGTGGTGTCGCGGGCTTGGTTGAGAGGTGTAAAAAAGCTAGTGCCACTTGGATTGTTTT CGTGTCGTATGCGGATGATAAAGAAGCGTAGCCCTCCCGCTGGTTCGGTTTCGATTCGTC CAAAAGGGCCCATTTGTGGCTGTGCGTGAGTGTTGGTTGTGCAGGGCGTGCGAGCGGGCC GAAGAGAGAAAGTTTGGGGTTGCGGTGTGTGTCCCCTTGCGGAAGGCAAAACCTGTGTGC GTGTGTGTGTGTTTTGTGATATTCTTCTACCTTTTAGTGAACGATTGCAACCCCCTTCCA CCAACATTCCAAGTTGCGGAAAAGAAATAATTGCTGTCTATTGAACAGTACTACCCGTGC CACCACCCCCCGTTCTGCCCTTCCGCCCGTGTTAGTGTGCCATTCTCTTTTGCAACCCTC CCCACCCCCCCCCCCACCCTCCCCTCTCGACGCGAGTGTGTAGTTTTGCGCAATAAAAAA AAGTGATGCGGGACCTGGCTAATAAGATGGCCGAACTCAAATTCGAGGCACCATTGGCAC AGTTCGAGGAGAGCGACGAGTGGGGCCCGGTCGAGTACCAGTCCTCGAATGTGGCCAACG GCAAAACGGCGGCCGTAACCATCAGCGACACGCTGAATCTGAACAATCTGAAAGAATCGC TCCGTTCGCTCGACGGCAACCAGCAGCAGCAGCAGCAGAACCAGAAGGATGACGACTTGA ACGAGCTGAACGACAACCTGCTGCTCGGGGACGACACGGTGCGGGGTGGGGGCGACTCGA ACACCACCACCACCACCACCACTGCCAACAACAACAACAACATTAAGGTGGGACCGATCA AAGACAACGTCGACTTTGCGGAAGCGTTCACCGGCAGTCTGGAGGATTTGGTCAACACGT TCGACGAGAAGATCACGAAATGCTTCGGCAACTACGAGCAGTCGGTGGAGGAGCTGGCCC CGGTGCAGGTCCGCTCGCAGGAGGAAATCATGAACGAGTGCCAGATGTGGTGGACTATTA CGGGCAACTTTGGCAACATTCTACCGATCGATTGGTCGAAAACGTA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)