These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5766#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1222 fasta sequence [GTTTACTTGGGGTCTCCGTATGGACCTATAGCAAACATAATGCTGTACCATAAATATTACATCGAAAAAGATGGAAACGAATCCCAGACCAAACTTGACCGGACTTCCAACAATTGATTGCCAGTCATCATAATTCCAACCGTTGAGTACCATCTGTAGCAGGCTCAACAATCCACCCGCAAGGTCCAGCAATCGGTTGGAGATAGCGACCTTCCGTGCTCTTTCGCCGGTAGTTCATAAGTACTTGTGGGATGTATTTGATCAAGTTTGTTGACAGCTTGACGTAGCTTAGTATGTACAGGAAGTCAAGCCAGTGCATCTGTTCCTCGATCGCAAAGCCACAGAACACGCTCACCATCAGTACATATCCGCGAAATGAGCAGTTTGACCGCAGTCGAGACAACGGTGCCACCATTCTGGTAGATGTAGCACTGGGCAATGAGGACCAAGTTTCCAAACACGGCGTGCACTGCATATCCCACATCATTCGGCACCACCGGATTCAGCCCAAATGGATGGCGTCTGAAATACTCGTCCTCAATAAACGCACTGCAGAACAGCACCACATTAAACGTCGCGTAACAGCAATTGCCGACGATGTTCAGGTAAAGGAAATCGAAGCTCAATCCGACGACGCTCTTGCGCCGGTAGCTGGTCCAAGCTTGAAAGTAATCGCCAATTGTCCAACAGACGGTGTACGTCCATCCGATGAGCATCGATACGATTATCAGCGGGCGATATTGGGCGACTTTGAGCTGTACAAATAGGCGGGCATCATCGACGACGCTGAGATTGCTGGTGATAATTATGGGACGGATGATAAATCGTCCCTGTTTCGATGACGAGATGTTGATGGAGAAGTGTTCGCTTTCGCATCCATTTATTGTGATAATTGAAGGGCTTAGTTTGATCTGCTCGTCGGCATCCCAAGTTAGGGTAATATTATGTCCATTTTTGTCACAGCCATGGAAGAGCAACCTTAAAATCTGCCGTTTGCGTTACGCTAGTTGTAAGCGCCTGAGGTTCTATTGTAAATTTCAAACGACTGCTTGAATTGCTAACTGCATTCACGCATTTATTGCTTAAAATAATGCCAAAAATGGCTAACGAACACAATTTGGTGAAAATCATTGCTACAAAGAAATTGAGCAACCTCCACGAAGTACAGCACTTCAAGTCACCATTTAACTTTGAGCGGACGCGTGGGCGGACGCGTGGGCGG] [+] EMBL CNS09QBQ [GTTTACTTGGGGTCTCCGTATGGACCTATAGCAAACATAATGCTGTACCATAAATATTACATCGAAAAAGATGGAAACGAATCCCAGACCAAACTTGACCGGACTTCCAACAATTGATTGCCAGTCATCATAATTCCAACCGTTGAGTACCATCTGTAGCAGGCTCAACAATCCACCCGCAAGGTCCAGCAATCGGTTGGAGATAGCGACCTTCCGTGCTCTTTCGCCGGTAGTTCATAAGTACTTGTGGGATGTATTTGATCAAGTTTGTTGACAGCTTGACGTAGCTTAGTATGTACAGGAAGTCAAGCCAGTGCATCTGTTCCTCGATCGCAAAGCCACAGAACACGCTCACCATCAGTACATATCCGCGAAATGAGCAGTTTGACCGCAGTCGAGACAACGGTGCCACCATTCTGGTAGATGTAGCACTGGGCAATGAGGACCAAGTTTCCAAACACGGCGTGCACTGCATATCCCACATCATTCGGCACCACCGGATTCAGCCCAAATGGATGGCGTCTGAAATACTCGTCCTCAATAAACGCACTGCAGAACAGCACCACATTAAACGTCGCGTAACAGCAATTGCCGACGATGTTCAGGTAAAGGAAATCGAAGCTCAATCCGACGACGCTCTTGCGCCGGTAGCTGGTCCAAGCTTGAAAGTAATCGCCAATTGTCCAACAGACGGTGTACGTCCATCCGATGAGCATCGATACGATTATCAGCGGGCGATATTGGGCGACTTTGAGCTGTACAAATAGGCGGGCATCATCGACGACGCTGAGATTGCTGGTGATAATTATGGGACGGATGATAAATCGTCCCTGTTTCGATGACGAGATGTTGATGGAGAAGTGTTCGCTTTCGCATCCATTTATTGTGATAATTGAAGGGCTTAGTTTGATCTGCTCGTCGGCATCCCAAGTTAGGGTAATATTATGTCCATTTTTGTC ] [-] EMBL CNS09QBP [ TGACAGCTTGACGTAGCTTAGTATGTACAGGAAGTCAAGCCAGTGCATCTGTTCCTCGATCGCAAAGCCACAGAACACGCTCACCATCAGTACATATCCG GAAATGAGCAGTTTGACCGCAGTCGAGACAACGGTGCCACCATTCTGGTAGATGTAGCACTGGGCAATGAGGACCAAGTTTCCAAACACGGCGTGCACTGCATATCCCACATCATTCGGCACCACCGGATTCAGCCCAAATGGATGGCGTCTGAAATACTCGTCCTCAATAAACGCACTGCAGAACAGCACCACATTAAACGTCGCGTAACAGCAATTGCCGACGATGTTCAGGTAAAGGAAATCGAAGCTCAATCCGACGACGCTCTTGCGCCGGTAGCTGGTCCAAGCTTGAAAGTAATCGCCAATTGTCCAACAGACGGTGTACGTCCATCCGATGAGCATCGATACGATTATCAGCGGGCGATATTGGGCGACTTTGAGCTGTACAAATAGGCGGGCATCATCGACGACGCTGAGATTGCTGGTGATAATTATGGGACGGATGATAAATCGTCCCTGTTTCGATGACGAGATGTTGATGGAGAAGTGTTCG TTTCGCATCCATTTATTGTGATAATTGAAGGGCTTAGTTTGATCTGCTCGTCGGCATCCCAAGTTAGGGTAATATTATGTCCATTTTTGTCACAGCCATGGAAGAGCAACCTTAAAATCTGCCGTTTGCGTTACGCTAGTTGTAAGCGCCTGAGGTTCTATTGTAAATTTCAAACGACTGCTTGAATTGCTAACTGCATTCACGCATTTATTGCTTAAAATAATGCCAAAAATGGCTAACGAACACAATTTGGTGAAAATCATTGCTACAAAGAAATTGAGCAACCTCCACGAAGTACAGCACTTCAAGTCACCATTTAA ] [-] EMBL BM615524 [ CTGAGATTGCTGGTGATAATTATGGGACGGATGATAAATCGTCCCTGTTTCGATGACGAGATGTTGATGGAGAAGGTTTCGCTTTCGCATCCATTTATTGTGATAATTGAAGGGCTTAGTTTGATCTGCTCGTCGGTATCCCAAGTTATGGTAATATTATGTCCATTTTCGCCACAGCCGTGGAATAACAA GTTAAAATCTGCCGTTTGTGTTACGCTAGTTGTAAGTGCCTGAGGTTCTATTGTAAATTTCAAACGACTGCTTGAATTGCTTACTGCATTCACGCATTTATTGCCTAAAATAATGCCAAAAATGGCTAACGAACACAATTTGGTGAAAATCATTGCCACAAAGGAATTGAGCAACCTCAGTCAAGTACAGCTCTTCAAGTCACCATTTAACTTTGAGCGGACGCGTGGGCGGACGCGTGGGCGG] consensusID : consensus_5766#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 704 fasta sequence [AAATACTCGTCCTCAATAAATCGCACTGCAGAACAGCACCACATTAAACGTCGCGTAACAGCAATTGCCGACGATGTTCAGGTAAAGGAAATCGAAGCTCAATCCGACGACGCTCTTGCGCCGGTAGCTAGTCCAACCTTGAAAGTAATCTCCAATTGTCCAGCAGACGGTGTACGTCCATCCGATGAGCATCGATACGATTATCAGCGGGCGATATTGGGCGACTTTGAGCTGTACAAACAGGCGGGCATCATCGACGACGCTGAGATTGCTGGTGATAATTATGGGACGGATGATAAATCGTCCCTGTTTCGATGACGAGATGTTGATGGAGAAGGTTTCGCTTTCGCATCCATTTATTGTGATAATTGAAGGGCTTAGTTTGATCTGCTCGTCGGTATCCCAAGTTATGGTAATATTATGTCCATTTTCGCCACAGCCGCTGGGAGATAATTGAGCAAAATATTATTGATACGAGCTAAGACTAATGAAATGGAAAGTAATACTTACTGGAATAACAAGTTAAAATCTGCCGTTTGTGTTACGCTAGTTGTAAGTGCCTGAGGTTCTATTGTAAATTTCAAACGACTGCTTGAATTGCTTACTGCATTCACGCATTTATTGCCTAAAATAATGCCAAAAATGGCTAACGAACACAATTTGGTGAAAATCATTGCCACAAAGGAATTGAGCGGACGCGTGGG] [-] EMBL BM603925 [AAATACTCGTCCTCAATAAATCGCACTGCAGAACAGCACCACATTAAACGTCGCGTAACAGCAATTGCCGACGATGTTCAGGTAAAGGAAATCGAAGCTCAATCCGACGACGCTCTTGCGCCGGTAGCTAGTCCAACCTTGAAAGTAATCTCCAATTGTCCAGCAGACGGTGTACGTCCATCCGATGAGCATCGATACGATTATCAGCGGGCGATATTGGGCGACTTTGAGCTGTACAAACAGGCGGGCATCATCGACGACGCTGAGATTGCTGGTGATAATTATGGGACGGATGATAAATCGTCCCTGTTTCGATGACGAGATGTTGATGGAGAAGGTTTCGCTTTCGCATCCATTTATTGTGATAATTGAAGGGCTTAGTTTGATCTGCTCGTCGGTATCCCAAGTTATGGTAATATTATGTCCATTTTCGCCACAGCCGCTGGGAGATAATTGAGCAAAATATTATTGATACGAGCTAAGACTAATGAAATGGAAAGTAATACTTACTGGAATAACAAGTTAAAATCTGCCGTTTGTGTTACGCTAGTTGTAAGTGCCTGAGGTTCTATTGTAAATTTCAAACGACTGCTTGAATTGCTTACTGCATTCACGCATTTATTGCCTAAAATAATGCCAAAAATGGCTAACGAACACAATTTGGTGAAAATCATTGCCACAAAGGAATTGAGCGGACGCGTGGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_5766#0 GTTTACTTGGGGTCTCCGTATGGACCTATAGCAAACATAATGCTGTACCATAAATATTAC 60 consensus_5766#1 ------------------------------------------------------------ consensus_5766#0 ATCGAAAAAGATGGAAACGAATCCCAGACCAAACTTGACCGGACTTCCAACAATTGATTG 120 consensus_5766#1 ------------------------------------------------------------ consensus_5766#0 CCAGTCATCATAATTCCAACCGTTGAGTACCATCTGTAGCAGGCTCAACAATCCACCCGC 180 consensus_5766#1 ------------------------------------------------------------ consensus_5766#0 AAGGTCCAGCAATCGGTTGGAGATAGCGACCTTCCGTGCTCTTTCGCCGGTAGTTCATAA 240 consensus_5766#1 ------------------------------------------------------------ consensus_5766#0 GTACTTGTGGGATGTATTTGATCAAGTTTGTTGACAGCTTGACGTAGCTTAGTATGTACA 300 consensus_5766#1 ------------------------------------------------------------ consensus_5766#0 GGAAGTCAAGCCAGTGCATCTGTTCCTCGATCGCAAAGCCACAGAACACGCTCACCATCA 360 consensus_5766#1 ------------------------------------------------------------ consensus_5766#0 GTACATATCCGCGAAATGAGCAGTTTGACCGCAGTCGAGACAACGGTGCCACCATTCTGG 420 consensus_5766#1 ------------------------------------------------------------ consensus_5766#0 TAGATGTAGCACTGGGCAATGAGGACCAAGTTTCCAAACACGGCGTGCACTGCATATCCC 480 consensus_5766#1 ------------------------------------------------------------ consensus_5766#0 ACATCATTCGGCACCACCGGATTCAGCCCAAATGGATGGCGTCTGAAATACTCGTCCTCA 540 consensus_5766#1 ---------------------------------------------AAATACTCGTCCTCA 15 *************** consensus_5766#0 ATAAA-CGCACTGCAGAACAGCACCACATTAAACGTCGCGTAACAGCAATTGCCGACGAT 599 consensus_5766#1 ATAAATCGCACTGCAGAACAGCACCACATTAAACGTCGCGTAACAGCAATTGCCGACGAT 75 ***** ****************************************************** consensus_5766#0 GTTCAGGTAAAGGAAATCGAAGCTCAATCCGACGACGCTCTTGCGCCGGTAGCTGGTCCA 659 consensus_5766#1 GTTCAGGTAAAGGAAATCGAAGCTCAATCCGACGACGCTCTTGCGCCGGTAGCTAGTCCA 135 ****************************************************** ***** consensus_5766#0 AGCTTGAAAGTAATCGCCAATTGTCCAACAGACGGTGTACGTCCATCCGATGAGCATCGA 719 consensus_5766#1 ACCTTGAAAGTAATCTCCAATTGTCCAGCAGACGGTGTACGTCCATCCGATGAGCATCGA 195 * ************* *********** ******************************** consensus_5766#0 TACGATTATCAGCGGGCGATATTGGGCGACTTTGAGCTGTACAAATAGGCGGGCATCATC 779 consensus_5766#1 TACGATTATCAGCGGGCGATATTGGGCGACTTTGAGCTGTACAAACAGGCGGGCATCATC 255 ********************************************* ************** consensus_5766#0 GACGACGCTGAGATTGCTGGTGATAATTATGGGACGGATGATAAATCGTCCCTGTTTCGA 839 consensus_5766#1 GACGACGCTGAGATTGCTGGTGATAATTATGGGACGGATGATAAATCGTCCCTGTTTCGA 315 ************************************************************ consensus_5766#0 TGACGAGATGTTGATGGAGAAGTGTTCGCTTTCGCATCCATTTATTGTGATAATTGAAGG 899 consensus_5766#1 TGACGAGATGTTGATGGAGAAGGTTTCGCTTTCGCATCCATTTATTGTGATAATTGAAGG 375 ********************** ************************************ consensus_5766#0 GCTTAGTTTGATCTGCTCGTCGGCATCCCAAGTTAGGGTAATATTATGTCCATTTTTGTC 959 consensus_5766#1 GCTTAGTTTGATCTGCTCGTCGGTATCCCAAGTTATGGTAATATTATGTCCATTTTCGCC 435 *********************** *********** ******************** * * consensus_5766#0 ACAGCC---------------------------------------------------ATG 968 consensus_5766#1 ACAGCCGCTGGGAGATAATTGAGCAAAATATTATTGATACGAGCTAAGACTAATGAAATG 495 ****** *** consensus_5766#0 GAA--------------GAGCAACC--TTAAAATCTGCCGTTTGCGTTACGCTAGTTGTA 1012 consensus_5766#1 GAAAGTAATACTTACTGGAATAACAAGTTAAAATCTGCCGTTTGTGTTACGCTAGTTGTA 555 *** ** *** ***************** *************** consensus_5766#0 AGCGCCTGAGGTTCTATTGTAAATTTCAAACGACTGCTTGAATTGCTAACTGCATTCACG 1072 consensus_5766#1 AGTGCCTGAGGTTCTATTGTAAATTTCAAACGACTGCTTGAATTGCTTACTGCATTCACG 615 ** ******************************************** ************ consensus_5766#0 CATTTATTGCTTAAAATAATGCCAAAAATGGCTAACGAACACAATTTGGTGAAAATCATT 1132 consensus_5766#1 CATTTATTGCCTAAAATAATGCCAAAAATGGCTAACGAACACAATTTGGTGAAAATCATT 675 ********** ************************************************* consensus_5766#0 GCTACAAAGAAATTGAGCAACCTCCACGAAGTACAGCACTTCAAGTCACCATTTAACTTT 1192 consensus_5766#1 GCCACAAAGGAATTGAGCGGACGCGTGGG------------------------------- 704 ** ****** ******** * * * consensus_5766#0 GAGCGGACGCGTGGGCGGACGCGTGGGCGG 1222 consensus_5766#1 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Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||