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Anopheles gambiae
cluster # 5824 cluster # 5824       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5824#0 length = 1838 sequences # 4  

consensusID : consensus_5824#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1838
fasta sequence
                              [TTTTTGTTTGCAATGCACCATGTTTCTCACAATGCGGTTTATTTCACTCACCGTATGTGCCCCTCCGTCCCGCTACGCGTCATAAAGAGACCGATTTGAATTTAATAGTTGAACAATTTTGAACCTGACCCTGACACTTCTACGTACATTAAATAACAAGAATTCCCTACTATTCGCCCACATAAGTCACCCGAAAATGCAAGCTAGCTAGCTTCGGGCCAGTCTAATTCAAAACAATCTGTGCTTTACAACTATGTACATGAGATCGCTTAACAATAATTCAAGTGAGAAGAAAATGGGCTGATATCTGATCCGCAAACG-ATGTGCGCTACTGGATAGGATGATGATATTGGACATAACATAACATTGTAAAGTTCTCATTCTTAGCTTAG-AAAAAATCCTTAACGAAACCAGCTTACTGGTAGGAATGTGCGCTAGAGCAAATCAATGTAGAGATAAACACTGTCCAAAACTTAAAACGGAAAACAGAACAAACCAACTTAGAATGCTTATCAAACTAATCACCGTTACCGGGCTGAGACGGAGAACGGAAGAAGCACAACGATTGCTTTTGAACAGCTCTCATTGACCACTTCTTCCACGACCCGCGGAGTGCAGTCTTGTTGTTGGGATACGACACCCCATCGACCGTAGCTGCTAATGAAATCTTTCCTAGGCTGTTAAGCAAGTGTGATAAAAGGCACTTCTTTTCGTCTTTTTATGTTTCTTTTTTTTCCTACAACCAAACTAAATTGCTTCACTCAGAGAGCTTCTTTTCAATAACATTTTGCGCTAGCTGCTGCGTTGGCTTACGGACTATTTCACTACAAAATGCCCATTCGAAGGTAGTTAATAAGAATCCTAAACAGCATTGTGACTAACAAAATAAAGGCTAAAGGCAAGCTCTGGTTGTGGGCGGACGATTGATTGACATTTACGCGCTTTCGGTGCGCGCATGAGAGGGGTGGGTCGGTTTATTGCACATTGGCCCCCGCGCGGCACCGGTGCACACTCACGGTTTCCACTCCTTTAAAAACTTTACCACCCGATTTAGCTCAACCAGCCAGCTCTTCAGATCGCTTTGCGTGTCTGCCGCCAGCAGGTAGCAGATGACATTGTTATGGCTTTGCGTCGAACCACCACCACCACCACCACGCTGCTGCTCCCCTGGTGACAGTGGTCGAAGCAGTCCGTCCCGGTCCTGATCACCGGCCGAGCAGCTTGGGCTCGTCGTACGGCCGGTGGTGCTTCGGAAGCTGCCGATGCCGCTGCTGTTGCAGCTAGCGCCGGCACCGGCCGCC-CACGCGTCCGCGGAATATTTCCACCTTGAGCGTGCGCGGACGGGAGCAGATCGTGCGATCGGCCAGCTGTATCCGCTCGTTTATACATTTCACCAGATCGATGTACAGTATCGGTTGCTTTTCCTGGCACTCTGCGGATAGTTCCAAAACTCGAGCATAAACCCGTTCATCTTGCACCAGCGCCGGTTCCAGGTGATGCTCTCGTCGCTGCCCTCCACCTTTTCGCCGACGTCCAGAAAGCCGGCAATGTCGGACCCGTCGAACCGTACCTCGTCCGCACGCTCATGCCGATCGTGCCGACCATGTTGGAGGTGTACGCCATCGAGTCGAGCGTCAGATACTTGAACTCCTCCGCGATGAACAGCACGCTCTGGTCGTCCCCCCGCCGGCAGACGACCGGCTGGAAGTGGCCCGTCGTCGAGTAGTAGGAATGGCCTTCCGCCAGCAGCTCCTCATCGCCATCGCCACCCTCCAGCATCGTCGACAGGTGTGTGTTGTGACTGGTGCGGGCGGTCGCGTACGTCGCATCGGGGGGTT]

[+] EMBL CNS08J44             [TTTTTGTTTGCAATGCACCATGTTTCTCACAATGCGGTTTATTTCACTCACCGTATGTGCCCCTCCGTCCCGCTACGCGTCATAAAGAGACCGATTTGAATTTAATAGTTGAACAATTTTGAACCTGACCCTGACACTTCTACGTACATTAAATAACAAGAATTCCCTACTATTCGCCCACATAAGTCACCCGAAAATGCAAGCTAGCTAGCTTCGGGCCAGTCTAATTCAAAACAATCTGTGCTTTACAACTATGTACATGAGATCGCTTAACAATAATTCAAGTGAGAAGAAAATGGGCTGATATCTGATCCGCAAACG ATGTGCGCTACTGGATAGGATGATGATATTGGACATAACATAACATTGTAAAGTTCTCATTCTTAGCTTAG AAAAAATCCTTAACGAAACCAGCTTACTGGTAGGAATGTGCGCTAGAGCAAATCAATGTAGAGATAAACACTGTCCAAAACTTAAAACGGAAAACAGAACAAACCAACTTAGAATGCTTATCAAACTAATCACCGTTACCGGGCTGAGACGGAGAACGGAAGAAGCACAACGATTGCTTTTGAACAGCTCTCATTGACCACTTCTTCCACGACCCGCGGAGTGCAGTCTTGTTGTTGGGATACGACACCCCATCGACCGTAGCTGCTAATGAAATCTTTCCTAGGCTGTTAA CAAGTGTGATAAAAGGCACTTCTTTTCGTCTTTTTATGTTTC TTTTTTTCCTACAACCAAACTAAATTGCTTCACTCAGAGAGCTTCTTTTCAATAACATTGCGCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BM618488             [                                                                                                                                                                                                                                                                                                                       TCCGCAAACGAATGTGCGCTACTGGATAGGATTATGATATTGGACATAACATACCATTGTAAAGTTCTCATTCTTAGCTTAGAAAAAAATCCTTAACGAAACCAGCTTACTGGTAGGAATGTGCGCTAGAGCAAATCAATGTAGAGATAAACACTGTCCAAAACTTAAAACGGAAAACAGAACAAACCAACTTAGAATGCTTATCAAACTAATCACCGTTACCGGGCTGAGACGGAGAACGGAAGAAGCACAACGATTGCTTTTGAACAGCTCTCATTGACCACTTCTTCCACGACCCGCGGAGTGCAGTCTTGTTGTTGGGATACGACACCCCATCGACCGTAGCTGCTAATGAAATCTTTCCTAGGCTGTTAAGCAAGTGTGATAAAAGGCACTTCTTTTCATCTTTTTATGTTTCTTTTTTTTCCTACAACCAAACTAAATTGCTTCACTCAGAGAGCTTCTTTTCAATAACATTTTGCGCTAGCTGCTGCGTTGGCTTACGGACTATTTCACTACAAAATGCCCATTCGAAGGTAGTTAATAAGAATCCTAAACAGCATTGTGACTAACAAAATAAAGGCTAAAGGCAAGCTCTGGTTGTGGGCGGACGATTGATTGACATTTACGCGCTTTCGGTGCGCGCATGAGAGGGGTGGGTCGGTTTATTGCACATTGGCCCCCGCGCGGCACCGGTGCACACTCACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BM613151             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCGACCGTAGCTGCTAATGAAATCTTTCCTAGGCTGTTAAGCAAGTGTGATAAAAGGCACTTCTTTTCGTCTTTTTATGTTTCTTTTTTTTCCTACAACCAAACTAAATTGCTTCACTCAGAGAGCTTCTTTTCAATAACATTTTGCGCTAGCTGCTGCGTTGGCTTACGGACTATTTCACTACAAAATGCCCATTCGAAGGTAGTTAATAAGAATCCTAAACAGCATTGTGACTAACAAAATAAAGGCTAAAGGCAAGCTCTGGTTGTGGGCGGACGATTGATTGACATTTACGCGCTTTCGGTGCGCGCATGAGAGGGGTGGGTCGGTTTATTGCACATTGGCCCCCGCGCGGCACCGGTGCACACTCAGAATTTCCACTCCTTTAAAAACTTTACCACCCGATTTAGCTCAACCAGCCAGCTCTTCAGATCGCTTTGCGTGTCTGCCGCCAGCAGGTAGCAGATGACATTGTTATGGCTTTGCGTCGAACCACCACCACCACCACCACGCTGCTGCTCCCCTGGTGACAGTGGTCGAAGCAGTCCGTCCCGGTCCTGATCACCGGCCGAGCAGCTTGGGCTCGTCGTACGGCCGGTGGTGCTTCGGAAGCTGCCGATGCCGCTGCTGTTGCAGCTAGCGCCGGCACCGGCCGCC CACGCGTCCGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS08J43             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCTTTGCGTGTCTGCCGCCAGCAGGTAGCAGATGACATTGTTATGGCTTTGCGTCGA      ACCACCACCACCGCGCTGCTGCTCCCCTGGTGACAGTGGTCGATGCAGT CGTCCCGGTCCTGATCACCGGCCGAGCAGCTTGGGCTCGTCGTACGGCCGGTGGTGCTTCGGAAGCTGCCGATGCCGCTGCTGTTGCAG TAGCGCCGGCACCGGCCGCCACCCG GGACGC GAATATTTCCACCTTGAGCGTGCGCGGACGGGAGCAGATCGTGCGATCGGCCAGCTGTATCCGCTCGTTTATACATTTCACCAGATCGATGTACAGTATCGGTTGCTTTTCCTGGCACTCTGCGGATAGTTCCAAAACTCGAGCATAAACCCGTTCATCTTGCACCAGCGCCGGTTCCAGGTGATGCTCTCGTCGCTGCCCTCCACCTTTTCGCCGACGTCCAGAAAGCCGGCAATGTCGGACCCGTCGAACCGTACCTCGTCCGCACGCTCATGCCGATCGTGCCGACCATGTTGGAGGTGTACGCCATCGAGTCGAGCGTCAGATACTTGAACTCCTCCGCGATGAACAGCACGCTCTGGTCGTCCCCCCGCCGGCAGACGACCGGCTGGAAGTGGCCCGTCGTCGAGTAGTAGGAATGGCCTTCCGCCAGCAGCTCCTCATCGCCATCGCCACCCTCCAGCATCGTCGACAGGTGTGTGTTGTGACTGGTGCGGGCGGTCGCGTACGTCGCATCGGGGGGTT]


>consensus_5824#0 TTTTTGTTTGCAATGCACCATGTTTCTCACAATGCGGTTTATTTCACTCACCGTATGTGC CCCTCCGTCCCGCTACGCGTCATAAAGAGACCGATTTGAATTTAATAGTTGAACAATTTT GAACCTGACCCTGACACTTCTACGTACATTAAATAACAAGAATTCCCTACTATTCGCCCA CATAAGTCACCCGAAAATGCAAGCTAGCTAGCTTCGGGCCAGTCTAATTCAAAACAATCT GTGCTTTACAACTATGTACATGAGATCGCTTAACAATAATTCAAGTGAGAAGAAAATGGG CTGATATCTGATCCGCAAACGATGTGCGCTACTGGATAGGATGATGATATTGGACATAAC ATAACATTGTAAAGTTCTCATTCTTAGCTTAGAAAAAATCCTTAACGAAACCAGCTTACT GGTAGGAATGTGCGCTAGAGCAAATCAATGTAGAGATAAACACTGTCCAAAACTTAAAAC GGAAAACAGAACAAACCAACTTAGAATGCTTATCAAACTAATCACCGTTACCGGGCTGAG ACGGAGAACGGAAGAAGCACAACGATTGCTTTTGAACAGCTCTCATTGACCACTTCTTCC ACGACCCGCGGAGTGCAGTCTTGTTGTTGGGATACGACACCCCATCGACCGTAGCTGCTA ATGAAATCTTTCCTAGGCTGTTAAGCAAGTGTGATAAAAGGCACTTCTTTTCGTCTTTTT ATGTTTCTTTTTTTTCCTACAACCAAACTAAATTGCTTCACTCAGAGAGCTTCTTTTCAA TAACATTTTGCGCTAGCTGCTGCGTTGGCTTACGGACTATTTCACTACAAAATGCCCATT CGAAGGTAGTTAATAAGAATCCTAAACAGCATTGTGACTAACAAAATAAAGGCTAAAGGC AAGCTCTGGTTGTGGGCGGACGATTGATTGACATTTACGCGCTTTCGGTGCGCGCATGAG AGGGGTGGGTCGGTTTATTGCACATTGGCCCCCGCGCGGCACCGGTGCACACTCACGGTT TCCACTCCTTTAAAAACTTTACCACCCGATTTAGCTCAACCAGCCAGCTCTTCAGATCGC TTTGCGTGTCTGCCGCCAGCAGGTAGCAGATGACATTGTTATGGCTTTGCGTCGAACCAC CACCACCACCACCACGCTGCTGCTCCCCTGGTGACAGTGGTCGAAGCAGTCCGTCCCGGT CCTGATCACCGGCCGAGCAGCTTGGGCTCGTCGTACGGCCGGTGGTGCTTCGGAAGCTGC CGATGCCGCTGCTGTTGCAGCTAGCGCCGGCACCGGCCGCCCACGCGTCCGCGGAATATT TCCACCTTGAGCGTGCGCGGACGGGAGCAGATCGTGCGATCGGCCAGCTGTATCCGCTCG TTTATACATTTCACCAGATCGATGTACAGTATCGGTTGCTTTTCCTGGCACTCTGCGGAT AGTTCCAAAACTCGAGCATAAACCCGTTCATCTTGCACCAGCGCCGGTTCCAGGTGATGC TCTCGTCGCTGCCCTCCACCTTTTCGCCGACGTCCAGAAAGCCGGCAATGTCGGACCCGT CGAACCGTACCTCGTCCGCACGCTCATGCCGATCGTGCCGACCATGTTGGAGGTGTACGC CATCGAGTCGAGCGTCAGATACTTGAACTCCTCCGCGATGAACAGCACGCTCTGGTCGTC CCCCCGCCGGCAGACGACCGGCTGGAAGTGGCCCGTCGTCGAGTAGTAGGAATGGCCTTC CGCCAGCAGCTCCTCATCGCCATCGCCACCCTCCAGCATCGTCGACAGGTGTGTGTTGTG ACTGGTGCGGGCGGTCGCGTACGTCGCATCGGGGGGTT



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)