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Anopheles gambiae
cluster # 5838 cluster # 5838       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5838#0 length = 1404 sequences # 4  

consensusID : consensus_5838#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1404
fasta sequence
                              [TCATTCCCGATCCGCAGTTTGAGGTCATCGGTAAAGGTCGTGCTGATTTGGTAGGCTATAATCGAGACGAACGAGTTACGACCCTAAATCCTACCATCATTGGAATTTCACCACGGGCAACACTGCACTCCAACAACGAATGCCGGCTGGCCGAACAGTACCGAACGTTACTCAAAAACGGGCTACAACATGAACACATTTGCTTCCAAAATAAGCCATTTTTAGTACCAGCCACATGTGACCAGCACCTTGGTGGTCCTATCGAGAGAGAAATGTGGCGCTATTCGAAGTACTTCAATTACGCTTACGGAATGAATCTGTTCGGTCGTGATTGTGGCTTCGGAGAGCCAGCAGTAGCTGTACGGTTTAATGCACACAGGCCGTGGATTGAGTCTGTATTGCTACCGGAAATTGCTAACAACAGAAAATCCTCCACTGCAGGATCGAAGGACGAGGTGATCTTCATCGATCCCGACCTTCGTTTGAACGATCGTTGTAGCTACAGTGGAGGCGTGCAGGGTGTTTGTGTAGCCCATGATAGATGTCCCAGTATACGGCAGCGAATGTCAAACGGCGATTCTATAATTATATGCTCCGGTGGGTCCGTGGTATGTTGCCCTCGTACAGATGTAACAAGTAATCCGAGTGAGATTGAGAGAGAATTTAACGAGTGCGGTCAGCGGTACGTACAGCTACGCAAGCAGCGCCAGCAACAATGGGAGGGTTTTCAACCATTGAGATTAAGGTTGCCTCATTTTGCTGAGGTAGGATGGGAAGAGGGATCGGAAATACGGTTCCAGTGCATTGCATATCTCATCAGTACTCGTGCTGTCGTAACGTCTGCGTCCTGTTTGGTTTCGAAAGAATTCGAACCGACCGTTGTGCGCCTGGGAAATATCCGATCTGGACCGCAGACCACGAATATAGCGATCATACCTATCAGCACAGTGGAAATTCATCCGGAGTTCAATCAAAGTACGTTTGAGAATAATATTGCCCTATTAAAGCTTACTTTGCCAGTGCAGCCTACAGTGTACATGTTCCCGGGATGTTTATGGCAAAATAAAACTCATTCTCCGGTCGAGTCGGCAATATTTCGAGGTGGAAATGGTTTCGACCCCATACATCCAATGTACGTGAGGGATTGTAATGTACGCTTTGCCAGAACATTCTCGGATCCGCGGATTACGTGTATGGTTCCGGGCGTTTACGGAACAGGGGAACACTGTTACCCAACGGGAAGTCCAATTATTTTCAGACAAAATGAGGACACCAATCTCTTTACTGAGTATCTGGTGAACATCTATAGCCATGGACGTTGCAATTCAACCTCTCTGCGCATTGTACACCGCATTGCGATGTACATTGATTGGTTTAAGGAAGTTCTGAGGTAAGGGTAAAATC]

[+] EMBL BX622854             [TCATTCCCGATCCGCAGTTTGAGGTCATCGGTAAAGGTCGTGCTGATTTGGTAGGCTATAATCGAGACGAACGAGTTACGACCCTAAATCCTACCATCATTGGAATTTCACCACGGGCAACACTGCACTCCAACAACGAATGCCGGCTGGCCGAACAGTACCGAACGTTACTCAAAAACGGGCTACAACATGAACACATTTGCTTCCAAAATAAGCCATTTTTAGTACCAGCCACATGTGACCAGCACCTTGGTGGTCCTATCGAGAGAGAAATGTGGCGCTATTCGAAGTACTTCAATTACGCTTACGGAATGAATCTGTTCGGTCGTGATTGTGGCTTCGGAGAGCCAGCAGTAGCTGTACGGTTTAATGCACACAGGCCGTGGATTGAGTCTGTATTGCTACCGGAAATTGCTAACAACAGAAAATCCTCCACTGCAGGATCGAAGGACGAGGTGATCTTCATCGATCCCGACCTTCGTTTGAACGATCGTTGTAGCTACAGTGGAGGCGTGCAGGGTGTTTGTGTAGCCCATGATAGATGTCCCAGTATACGGCAGCGAATGTCAAACGGCGATTCTATAATTATATGCTCCGGTGGGTCCGTGGTATGTTGCCCTCGTACAGATGTAACAAGTAATCCGAGTGAGATTGAGAGAGAATTTAACGAGTGCGGTCAGCGGTACGTACAGCTACGCAAGCAGCGCCAGCAACAATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX615482             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGAGTGAGATTGAGAGAGAATTTAACGTTTGCGGTCAGCGGTACGTACAGCTACGCAAGCAGCGCCAGCAACAATGGGAGGGTTTTCAACCATTGAGATTAAGGTTGCCTCATTTTGCTGAGGTAGGATGGGAAGAGGGATCGGAAATACGGTTCCAGTGCATTGCATATCTCATCAGTACTAGTGCTGTCGTAACGTCTGCGTCCTGTTTGGTTTCGAAAGAATTCGAACCGACCGTTGTGCGCCTGGGAAATATCCGATCTGGACCGCAGACCACGAATATAGCGATCATACCTATCAGCACAGTGGAAATTCATCCGGAGTTCAATCAAAGTACGTTTGAGAATAATATTGCCCTATTAAAGCTTACTTTGCCAGTGCAGCCTACAGTGTACATGTTCCCGGGATGTTTATGGCAAAATAAAACTCATTCTCCGGTCGAGTCGGCAATATTTCGAGGTGGAAATGGTTTCGACCCCATACATCCAATGTACGTGAGGGATTGTAATGTACGCTTTGCCAGAACATTCTCGGATCCGCGGATTACGTGTATGGTTCCGGGCGTTTACGGAACAGGGGAACACTGTTACCCAACGGGAAGTCCAATTATTTTCAGACAAAATGAGGACACCAATCTCTTTACTGAGTATCTGGTGAACATCTATAGCCATGGACGTTGCAATTCAACTTCTCTGCGCATTGTACACCGCATTGCGATGTACATTGATTGGTTTAAGGAAGTTCTGAGGTAAGGGTAAAATC]
[+] EMBL BM616321             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            cCGCACAGCTACGCAAGCAGCGCCAGCAACAATGGGAGGGTTTTCAACCATTGAGATTAAGGTTGCCTCATTTTGCTGAGGTAGGATGGGAAGAGGGATCGGAAATACGGTTCCAGTGCATTGCATATCTCATCAGTACTCGTGCTGTCGTAACGTCTGCGTCCTGTTTGGTTTCGAAAGAATTCGAACCGACCGTTGTGCGCCTGGGAAATATCCGATCTGGACCGCAGACCACCAATATAGCGATCATACCTATCAGCACAGTGGAAATTCATCCGGAGTTCAATCAAAGTACGTTTGAGAATAATATTGCCCTATTAAAGCTTACTTTGCCAGTGCAGCCTACAGTGTACATGTTCCCGGGATGTTTATGGCAAAATAAAACTCATTCTCCGGTCGAGTCGGCAATATTTCGAGGTGGAAATGGTTTCGACCCCATACATCCAATGTACGTGAGGGATTGTAATGTACGCTTTGCCAGAACATTCTCGGATCCGCGGATTACGTGTATGGTTCCGGGCGTTTACGGAACAGGGGAACACTGTTACTCAACGGGAAGTCCAATTATTTTCAGACAAAATGAGGACACCAATCTCTTTACTGAGTATCTGGTGAACATCTATAGCCATGGACGTTGCAATTCAACCTCTCTGCGCATTGTACACCGCATTGCGATGTACATTGATTGGGTTt                           ]
[+] EMBL BM645778             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccGGGAAGAGGGATCGGAAATACGGTTCCAGTGCATTGCATATCTCATCAGTACTCGTGCTGTCGTAACGTCTGCGTCCTGTTTGGTTTCGAAAGAATTCGAACCGACCGTTGTGCGCCTGGGAAATATCCGATCTGGACCGCAGACCACGAATATAGCGATCATACCTATCAGCACAGTGGAAATTCATCCGGAGTTCAATCAAAGTACGTTTGAGAATAATATTGCCCTATTAAAGCTTACTTTGCCAGTG    CTACAGTGTACATGTTCCCGGGATGTTTATGGCAAAATAAAACTCATTCTCCGGTCGAGTCGGCAATATTTCGAGGTGGAAATGGTTTCGACCCCATACATCCAATGTACGTGAGGGATTGTAATGTACGCTTTGCCAGAACATTCTCGGATCCGCGGATTACGTGTATGGTTCCGGGCGTTTACGGAACAGGGGAACACTGTTACCCAACGGGAAGTCCAATTATTTTCAGACAAAATGAGGACACCAATCTCTTTACTGAGTATCTGGTGAACATCTATAGCCATGGACGTTGCAATTCAACCTCTCTGCGCA                                                               ]


>consensus_5838#0 TCATTCCCGATCCGCAGTTTGAGGTCATCGGTAAAGGTCGTGCTGATTTGGTAGGCTATA ATCGAGACGAACGAGTTACGACCCTAAATCCTACCATCATTGGAATTTCACCACGGGCAA CACTGCACTCCAACAACGAATGCCGGCTGGCCGAACAGTACCGAACGTTACTCAAAAACG GGCTACAACATGAACACATTTGCTTCCAAAATAAGCCATTTTTAGTACCAGCCACATGTG ACCAGCACCTTGGTGGTCCTATCGAGAGAGAAATGTGGCGCTATTCGAAGTACTTCAATT ACGCTTACGGAATGAATCTGTTCGGTCGTGATTGTGGCTTCGGAGAGCCAGCAGTAGCTG TACGGTTTAATGCACACAGGCCGTGGATTGAGTCTGTATTGCTACCGGAAATTGCTAACA ACAGAAAATCCTCCACTGCAGGATCGAAGGACGAGGTGATCTTCATCGATCCCGACCTTC GTTTGAACGATCGTTGTAGCTACAGTGGAGGCGTGCAGGGTGTTTGTGTAGCCCATGATA GATGTCCCAGTATACGGCAGCGAATGTCAAACGGCGATTCTATAATTATATGCTCCGGTG GGTCCGTGGTATGTTGCCCTCGTACAGATGTAACAAGTAATCCGAGTGAGATTGAGAGAG AATTTAACGAGTGCGGTCAGCGGTACGTACAGCTACGCAAGCAGCGCCAGCAACAATGGG AGGGTTTTCAACCATTGAGATTAAGGTTGCCTCATTTTGCTGAGGTAGGATGGGAAGAGG GATCGGAAATACGGTTCCAGTGCATTGCATATCTCATCAGTACTCGTGCTGTCGTAACGT CTGCGTCCTGTTTGGTTTCGAAAGAATTCGAACCGACCGTTGTGCGCCTGGGAAATATCC GATCTGGACCGCAGACCACGAATATAGCGATCATACCTATCAGCACAGTGGAAATTCATC CGGAGTTCAATCAAAGTACGTTTGAGAATAATATTGCCCTATTAAAGCTTACTTTGCCAG TGCAGCCTACAGTGTACATGTTCCCGGGATGTTTATGGCAAAATAAAACTCATTCTCCGG TCGAGTCGGCAATATTTCGAGGTGGAAATGGTTTCGACCCCATACATCCAATGTACGTGA GGGATTGTAATGTACGCTTTGCCAGAACATTCTCGGATCCGCGGATTACGTGTATGGTTC CGGGCGTTTACGGAACAGGGGAACACTGTTACCCAACGGGAAGTCCAATTATTTTCAGAC AAAATGAGGACACCAATCTCTTTACTGAGTATCTGGTGAACATCTATAGCCATGGACGTT GCAATTCAACCTCTCTGCGCATTGTACACCGCATTGCGATGTACATTGATTGGTTTAAGG AAGTTCTGAGGTAAGGGTAAAATC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)