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Anopheles gambiae
cluster # 5870 cluster # 5870       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5870#0 length = 896 sequences # 4  

consensusID : consensus_5870#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 896
fasta sequence
                              [CCGGCAAAACGGGGCGTCCCTGTCAGTACAATTTTCTGGTCAATTTAGATCCATCCCTGAACAGCAATCAGCGGATAGTGATAATTAAGAAAAAGATCCAGGAGCTGCGCAAAACGTACAACTCGATCAAGGCCGAGCTGGCCAGTATCGATCGAAGGCGCAAGAAGCTTCGCCGCCGGGAGCGAGAAAACAAGAAGCAAGCCAAACTGAACAGTGCCAGCGCCGGCAATAACTAAGGAGAAGAAGCGCGCTGCCATTGGGACTCCGTTTCCGGTTGTTCTGTTCATTATTCCTTCG-TTTTTTTCTATTTTGTTACTCCTATTTTATTTCAGTGACACAGTTTTTTTTAAGCTCGGCCT----ACTGAGAAAATACC--GAGAGAG-G-AAGGCAGACGAGCTTCTGCTGACAACGTACAAAGGCCCTCAGCCTCTCCCATCCTTATGCACACAT--ACACACACACACATCCTTTATTGTGATCCCATGTGAAGCGAGAAGGCATTTCTGGGGAACCTTTCCTTCGAATGGGGGGGAAAGTTAAGATGGTTTTAATTTTATCATTGTTTTTAGTGTTTAAAAGGGGTTT-CCTT-ATTATTGTGCATTACATTTAGGGGTCGTTTTTTGCTTCTTCTTCTTCTTCTTCTTCTTTCCTCCATATTTACTTTATTGTGTTGTTAACGCGTTAGGTGTGTGTGTGTGCTACTAAGGCGCGAAGAAAGTGTGAATCTAGGACAGTAGGCAATAGTAAGGTAATAGATGGTCCTGGTGGGTGGACGATTACTACATAAGTATCGAATCGAGCAGGACAGGAGTGGATGACAAACGCATCGCGGTTTGTAAATTGAGCAGCCAATTTTTAATTAGCATTATTTAGTGATAGTAGAGAGAGAGCACATACACAC]

[+] EMBL BM622423             [CCGGCAAAACGGGGCGTCCCTGTCAGTACAATTTTCTGGTCAATTTAGATCCATCCCTGAACAGCAATCAGCGGATAGTGATAATTAAGAAAAAGATCCAGGAGCTGCGCAAAACGTACAACTCGATCAAGGCCGAGCTGGCCAGTATCGATCGAAGGCGCAAGAAGCTTCGCCGCCGGGAGCGAGAAAACAAGAAGCAAGCCAAACTGAACAGTGCCAGCGCCGGCAATAACTAAGGAGAAGAAGCGCGCTGCCATTGGGACTCCGTTTCCGGTTGTTCTGTTCATTATTCCTTCGTTTTTTTTCTATTTTGTTACTCCTATTTTATTTCAGTGACACAGTTTTTTTTAAGCTCGGCCT    ACTGAGAAAATACC  GAGAGAG G AAGGCAGACGAGCTTCTGCTGACAACGTACAAAGGCCCTCAGCCTCTCCCATCCTTATGCACAGAT    ACACACACACGTCCCTTATTGTGATCCCATGTGAAGCGAGAAGGCATTTCTGGGGAACCTTTCCTTCGAATGGGGGGGAAAGTTAAGATGGTTTTAATTTTATCATTGTTTTTAGTGTTTAAAA     TT CATT ATTATTGTGCATTACATTTAGGGGTCGGGTTTTGCTTCTTCTTCTTCTTCTTCTTCTTTCTTCC                                                                                                                                                                                                                                                        ]
[+] EMBL BM628465             [                                                                                                                                        ccgGGCCAGTATCGATCGCAGGCGCAAGAAGCTTCGCCGCCGGGAGCGAGAAAACAAGAAGCAAGCCAAACTGAACAGTGCCAGCGCCGGCAATAACTAAGGAGAAGAAACGCGCTGCCATTGGGACTCCGTTTCCGGTTGTTCTGTTCATTATTCCTTCG TTTTTTTCTATTTTGTTACTCCTATTTTATTTCAGTGACATCG TTTTTTTAAGCTCGGCCTACACACTGAGAAAACACC  GAGAGAGAGAAAGGCAGAAGAGCTTCTGCTGACAACGTACAAAGGCCCTCAGCCTCTCCCATCCTTATACTCACAT  ACACACACACACATCCTTTATTGTGATCCCATGTGAAGCGAGAAGGCATTTCTGGGGAACCTTTCCTTCGAAT GGGGGGAAAGTTAAAATGGTTTTAATTTTATCATTGTTTTTAGTGTTTAAAAGGGGTTTCCCTTCATTATTGTGCATTACATTTAGGGGTCGTTTTTTGCTTCTTCTTCTTCTTCTT                                                                                                                                                                                                                                                                    ]
[+] EMBL BX622788             [                                                                                                                                                                                                                                            GGAGAAGAAGCGCGCTGCCATTGGGACTCTGTTTCCGGTTGTTCTGTTCATTATTCCTTCG  TTTTTTCTATTTTGTTACTCCTATTTTATTTCAGTGACACAGTTTTTTTTAAGCTCGGCCT    ACTGAGAAAATACCGAGAGAGAG G AAGGCAGACGAGCTTCTGCTGACAACGTACAAAGGCCCTCAGCCTCTCCCATCCTTATGCACACATACACACACACACACATCCTTTATTGTGATCCCATGTGAAGCGAGAAGGCATTTCTGGGGAACCATTCCTTCGAATGGGGGGGAAAGTTAAGATGGTTTTAATTTTATCATTGTTTTTAGTGTTTAACAGGGGTTT CCCT  TTATTGTGCATTACATTTAGGGGTAGTTTTTTGCTTCTTCTTCTTCTTCTTCTTCTTTCCTCCATATTTACTTTATTGTGTTGTTAACGCGTTAGGTGTGTGTGTGTGCTACTAAGGCGCGAAGAAAGTGTGAATCTAGGACAGTAGGCAATAGTAAGGTAATAGATGGTCCTGGTGGGTGGACGATTACTACATAAGTATCGAATCGAGCAGGACAGGAGTGGAT                                                                                     ]
[+] EMBL BX611376             [                                                                                                                                                                                                                                                                                                                                                                      CT    ACTGAGAAAATACCGAGAGAGAG G AAGGCAGACGAGCTTCTGCTGACAACGTACAAAGGCCCTCAGCCTCTCCCATCCTTATGCACACATACACACACACACACATCCTTTATTGTGATCCCATGTGAAGCGAGAAGGCATTTCTGGGGAACCATTCCTTCGAATGGGGGGGAAAGTTAAGATGGTTTTAATTTTATCATTGTTTTTAGTGTTTAACAGGGGTTT CCCT  TTATTGTGCATTACATTTAGGGGTAGTTTTTTGCTTCTTCTTCTTCTTCTTCTTCTTTCCTCCATATTTACTTTATTGTGTTGTTAACGCGTTAGGTGTGTGTGTGTGCTACTTAGGCGCGAAGAAAGTGTGAATCTAGGACAGTAGGCAATAGTAAGGTAATAGATGGTCCTGGTGGGTGGACGATTACTACATAAGTATCGAATCGAGCAGGACAGGAGTGGATGACAAACGCATCGCGGTTTGTAAATTGAGCAGCCAATTTTTAATTAGCATTATTTAGTGATAGTAGAGAGAGAGCACATACACAC]


>consensus_5870#0 CCGGCAAAACGGGGCGTCCCTGTCAGTACAATTTTCTGGTCAATTTAGATCCATCCCTGA ACAGCAATCAGCGGATAGTGATAATTAAGAAAAAGATCCAGGAGCTGCGCAAAACGTACA ACTCGATCAAGGCCGAGCTGGCCAGTATCGATCGAAGGCGCAAGAAGCTTCGCCGCCGGG AGCGAGAAAACAAGAAGCAAGCCAAACTGAACAGTGCCAGCGCCGGCAATAACTAAGGAG AAGAAGCGCGCTGCCATTGGGACTCCGTTTCCGGTTGTTCTGTTCATTATTCCTTCGTTT TTTTCTATTTTGTTACTCCTATTTTATTTCAGTGACACAGTTTTTTTTAAGCTCGGCCTA CTGAGAAAATACCGAGAGAGGAAGGCAGACGAGCTTCTGCTGACAACGTACAAAGGCCCT CAGCCTCTCCCATCCTTATGCACACATACACACACACACATCCTTTATTGTGATCCCATG TGAAGCGAGAAGGCATTTCTGGGGAACCTTTCCTTCGAATGGGGGGGAAAGTTAAGATGG TTTTAATTTTATCATTGTTTTTAGTGTTTAAAAGGGGTTTCCTTATTATTGTGCATTACA TTTAGGGGTCGTTTTTTGCTTCTTCTTCTTCTTCTTCTTCTTTCCTCCATATTTACTTTA TTGTGTTGTTAACGCGTTAGGTGTGTGTGTGTGCTACTAAGGCGCGAAGAAAGTGTGAAT CTAGGACAGTAGGCAATAGTAAGGTAATAGATGGTCCTGGTGGGTGGACGATTACTACAT AAGTATCGAATCGAGCAGGACAGGAGTGGATGACAAACGCATCGCGGTTTGTAAATTGAG CAGCCAATTTTTAATTAGCATTATTTAGTGATAGTAGAGAGAGAGCACATACACAC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)