Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5900 cluster # 5900       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5900#0 length = 1077 sequences # 4  

consensusID : consensus_5900#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1077
fasta sequence
                              [CTCAAGTTCCGCTTTGATATGGATGCTGGGTACTGGTCCATGTCCAAGGTGGACGTATTTGTGATGGACACGAAGAGCAAGGACGGTGCCAAGTCGCTCGATACGACGCTGGAACTGGAGGGTAAGGCCCCGTACGCACCGCTGGGCGCATCGTACTCTTGCGCCCGCCAGCTGGTATTCCGCAATGGCACCACCATTCTGACGCTGGAGAACATTCAGGTTCAGCCGGCCCTGGAAGGGAAAACGAAGTTTGACAGTGCCTGGGACTGCGTTGGGTTCACCACGGCACCGATCCTGTCCGGCATCTTCGTCACGTCCTTCATGCTGATCGGGCTGACCATCGCCATCATCGCCATACTGGACATCAAGACACCGAACCGGTTCGAGTCACGCACCGGAAAGCAGTTGACATTCACCGTGCAGGAGTAAGTCACCGGGACGGGCAACGGTCACTTTCTTCCCACCCCCCTTCTAAAGAGTGAATGTGTGTACAAGTGTTAACCTTTAACATGAGGTGCAGGCGTGAAGAGATGAGACCTCGTTCAGGTGAACCGGGACGGCTGGAAGGTATGTTAGGTCTCATGGTTTGACCATACAATACTGTGGCACCGTTGGAGACAGGTTAGGAAATCAAACAAACAGGTAGTACTTGCAAGTGCACAGTTCTCATCTTCAAGATATGCACTTTCGAGCCGGTTCCTCCTCTCGTGTGACTCCATACTACTTACTCATTTTAGTTGAATTCCCAGGTTCGTTTCCAAGCAAAGTGCACATCCGTGTGCGTGATAGTTCGATTTAATTTTTGGTTTTGTTAGGTTAGATATTACTCATTGATATTACTGAATAAGGCAACTGGATCAGGTTCGAACGTTGCCGGACTCGCAAACGGAGTTACGGTCATATCTCTAAACACAGACGTTACGATTACAATGTTACACCGGCTCCACAAAAGGGCTCGGTGTTGCTTCATACTGAACTGGAAACGCAACACGGAAGATGCGGGAAAATGTTAATGTAAATGTTTCGGCTAGCTTAAGCGTGCAATAAATAACTTCTCACACACCGGTACAACACTCC]

[+] EMBL BX625124             [CTCAAGTTCCGCTTTGATATGGATGCTGGGTACTGGTCCATGTCCAAGGTGGACGTATTTGTGATGGACACGAAGAGCAAGGACGGTGCCAAGTCGCTCGATACGACGCTGGAACTGGAGGGTAAGGCCCCGTACGCACCGCTGGGCGCATCGTACTCTTGCGCCCGCCAGCTGGTATTCCGCAATGGCACCACCATTCTGACGCTGGAGAACATTCAGGTTCAGCCGGCCCTGGAAGGGAAAACGAAGTTTGACAGTGCCTGGGACTGCGTTGGGTTCACCACGGCACCGATCCTGTCCGGCATCTTCGTCACGTCCTTCATGCTGATCGGGCTGACCATCGCCATCATCGCCATACTGGACATCAAGACACCGAACCGGTTCGAGTCACGCACCGGAAAGCAGTTGACATTCACCGTGCAGGAGTAAGTCACCGGGACGGGCAACGGTCACTTTCTTCCCACCCCCCTTCTAAAGAGTGAATGTGTGTACAAGTGTTAACCTTTAACATGAGGTGCAGGCGTGAAGAGATGAGACCTCGTTCAGGTGAACCGGGACGGCTGGAAGGTATGTTAGGTCTCATGGTTTGACCATACAATACTGTGGCACCGTTGGAGACAGGTTAGGAAATCAAACAAACAGGTAGTACTTGCAAGTGCACAGTTCTCATCTTCAAGATATGCACTTTCGAGCCGGTTCCTCCTCTCGTGTGACTCCATACTACTTACTCATTTTAGTTGAATTCCCAGGNTCGTTTCCNAGCAAAGTGCACATCCGTGTGCGTGATAGTTCGATT                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM655060             [                                                                                                                                                                                                                                                 ccgCGAAGTTTGACAGTGCCTGGGACTGCGTTGGATTCACCACGGCACCGATCCTGTCCGGCATCTTCGTCACGTCCTTCATGCTGATCGGGCTGACCATCGCCATCATCGCCATACTGGACATCAAGACGCCGAACCGGTTCGAGTCACGCACCGGAAAGCAGTTGACATTCACCGTGCAGGAGTAAGTCACCGGGACGGGCAACGGTCACTTTCTTCCCACCCCCCTTCTAAAGAGTGAATGTGTGTACAAGTGTTAACCTTTAACATGAGGTGCAGGCGTGAAGAGATGAGACCTCGTTCAGGTGAACCGGGACGGCTGGAAGGTATGTTAGGCCTCATGGTTTGACCATACAATACTGTGGCACCGTTGGAGACAGGTTAGGAAATCAAACAAACAGGTAGTACTTGCAAGTACACAGTTCTCATCTTCAAGATCTGCATTGTCGAGCCGGTTCCTCCTCTCGTGTGACTCCATACTACTTACTCATTTTAGTTGAATTCCCAGGTTCGTTTCCAAGCAAAGTGCACATCCGTGTGCGTGATAGTTCGATTTAATTTTTGGTTTTGTTAGGTTAGATATTACTCATTGATATTACTGAATAAGGCAACTGGATCAGGTTCGAACGTTGCCGGACTCGCAAACGGAGTTACGGTCAT                                                                                                                                                                                ]
[+] EMBL BM631396             [                                                                                                                                                                                                                                                                                    ccgcCCACGCGTCCGATCCTGTCCGGCATCTTCGTCACGTCCTTCATGCTGATCGGGCTGACCATCGCCATCATCGCCATACTGGACATCAAGACACCGAACCGGTTCGAGTCACGCACCGGAAAGCAGTTGACATTCACCGTGCAGGAGTAAGTCACCGGGACGGGCAACGGTCACTTTCTTCCCACCCCCCTCCTAAAGAGTGAATGTGTGTACAAGTGTTAACCTTTAACATGAGGTGCAGGCGTGAAGAGATGAGACCTCGTTCAGGTGAACCGGGACGGCTGGAAGGTATGTTAGGTCTCATGGTTTGACCATACAATACTGTGGCACCGTTGGAGACAGGTTAGGAAATCAAACAAACAGGTAGTACTTGCAAGTGCACAGTTCTCATCTTCAAGATATGCACTTTCGAGCCGGTTCCTCCTCTCGTGTGACTCCATACTACTTACTCATTTTAGTTGAATTCCCAGGTTCGTTTCCAAGCAAAGTGCACATCCGTGTGCGTGATAGTTCGATTTAATTTTTGGTTTTGTTAGGTTAGATATTACTCATTGATATTACTGAATAAGGCAACTGGATCAGGTTCGAACGTTGCCGGACTCGCAAACGGAGCTACGGTCATATCTCTAAACACAGACGTTACGATTACAATGTTACACCGGCTCCACAAAAGGGCTCGGTGTTGCTTCATACTGA                                                                                                      ]
[+] EMBL BM647665             [                                                                                                                                                                                                                                                                                                                                                                                                                                                      cCGGGCAACGGTCACTTTCTTCCCACCCCCCTTCTAAAGAGTGAATGTGTGTACAAGTATTAACCTTTAACATGAGGTGCAGGCGTGAAGAGATGAGACCTCGTTCAGGTGAACCGGGACGGCTGGAAGGTATGTTAGGCCTCATGGTTTGACCATACAATACTGTGGCACCGTTGGAGACAGGTTAGGAAATCAAACAAACAGGTAGTACTTGCAAGTACACAGCTCTCATCTTCAAGATCTGCATTGTCGAGCCGGTTCCTCACCTCATGTGACTCCATACTACTTACTCATTTCACTTGAATTCCCAGGTTCGTTTCCAATCAAAGTGCACATCCGTGTGCGTGATAGTTCGATTTAATTTTTGGTTTTGTTAGGTTAGATATTACTCATTGATATTACTGAATAAGGCAACTGGATCAGGTTCGAACGTTGCCGGACTCGCAAACGGAGTTACGGTCATATCTCTAAACACAGACGTTACGATTACAATGTTACACCGGCTCCACAAAAGGGCTCGGTGTTGCTTCATACTGAACTGGAAACGCAACACGGAAGATGCGGGAAAATGTTAATGTAAATGTTTCGGCTAGCTTAAGCGTGCAATAAATAACTTCTCACACACCGGTACAACACTCC]


>consensus_5900#0 CTCAAGTTCCGCTTTGATATGGATGCTGGGTACTGGTCCATGTCCAAGGTGGACGTATTT GTGATGGACACGAAGAGCAAGGACGGTGCCAAGTCGCTCGATACGACGCTGGAACTGGAG GGTAAGGCCCCGTACGCACCGCTGGGCGCATCGTACTCTTGCGCCCGCCAGCTGGTATTC CGCAATGGCACCACCATTCTGACGCTGGAGAACATTCAGGTTCAGCCGGCCCTGGAAGGG AAAACGAAGTTTGACAGTGCCTGGGACTGCGTTGGGTTCACCACGGCACCGATCCTGTCC GGCATCTTCGTCACGTCCTTCATGCTGATCGGGCTGACCATCGCCATCATCGCCATACTG GACATCAAGACACCGAACCGGTTCGAGTCACGCACCGGAAAGCAGTTGACATTCACCGTG CAGGAGTAAGTCACCGGGACGGGCAACGGTCACTTTCTTCCCACCCCCCTTCTAAAGAGT GAATGTGTGTACAAGTGTTAACCTTTAACATGAGGTGCAGGCGTGAAGAGATGAGACCTC GTTCAGGTGAACCGGGACGGCTGGAAGGTATGTTAGGTCTCATGGTTTGACCATACAATA CTGTGGCACCGTTGGAGACAGGTTAGGAAATCAAACAAACAGGTAGTACTTGCAAGTGCA CAGTTCTCATCTTCAAGATATGCACTTTCGAGCCGGTTCCTCCTCTCGTGTGACTCCATA CTACTTACTCATTTTAGTTGAATTCCCAGGTTCGTTTCCAAGCAAAGTGCACATCCGTGT GCGTGATAGTTCGATTTAATTTTTGGTTTTGTTAGGTTAGATATTACTCATTGATATTAC TGAATAAGGCAACTGGATCAGGTTCGAACGTTGCCGGACTCGCAAACGGAGTTACGGTCA TATCTCTAAACACAGACGTTACGATTACAATGTTACACCGGCTCCACAAAAGGGCTCGGT GTTGCTTCATACTGAACTGGAAACGCAACACGGAAGATGCGGGAAAATGTTAATGTAAAT GTTTCGGCTAGCTTAAGCGTGCAATAAATAACTTCTCACACACCGGTACAACACTCC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)