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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5931#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 857 fasta sequence
[TTTTTTACGACAGCAAACTCCAATTTTCACGATATTGTACGATTTTCAAACAATTTAATATAAAACAGCTAGTCTACATACTTTTTGAAGGTAGATGTGTACCGCTTGACTTAGATCTTTGCCCACAATAGTAATAGTGTTGCGTGTTACCTATGCGTTAGGAGGTTGTTTCACTCTAATACCAAAGACTCGGCTGATTACGAGAACAGTACAGTAACATGATGGGACCAAACGCTCACAGCTACTGTTTGCTGCGCGCACGGAAAAGTCTCCCCTACGTGCTGCGAACTATTCACCATTCACACTCGAAACACACCAGAGACAGTGGACGACGCCGGGTGGTGGTAACGGGGCTCGGTGTAGTATCACCTGTCGGCTGCAATGTGGAAGCGGCCTGGCAAACCGATCCTCTCCGGTCAGTCAAAAAAGTTGGTCGACTGGTGGGAGAAACGTACGACAAGCTTCCCTGCCGCGTAGCGGCCACAATCGACACGAACGACATCGATCTGGAAAAGTGTTTCTCCAAAACCGAGCTCAAAACGATGGCACGCGCTACCGCCTTTGCGTTGATCGCTGCCAAGGAGGCTCTCTCGAGGGCTAGCTGGATGCCGGGCGTGGAGGATGAAACCGCCTGCCAGCGCACCGGTGTTGCCATCGGTATGGGCATGGTAGATCTGATGGACATTTGCGAGACGAACGAAGCGCTCAAGAAGGGATACAACCGGGTGAGCCCATTTTTTGTGCCCCGCATCTTGCCCAACATGCCGGCCGGGCAGCTCAGCATCCCGGTACGGGGTTTCGCGGACCGAACCATGCCGTTTTCTACCGCCTGGTGCTACGGGTGCCCATGCCATAAG]
[+] EMBL AGA281173 [TTTTTTACGACAGCAAACTCCAATTTTCACGATATTGTACGATTTTCAAACAATTTAATATAAAACAGCTAGTCTACATACTTTTTGAAGGTAGATGTGTACCGCTTGACTTAGATCTTTGCCCACAATAGTAATAGTGTTGCGTGTTACCTATGCGTTAGGAGGTTGTTTCACTCTAATACCAAAGACTCGGCTGATTACGAGAACAGTACAGTAACATGATGGGACCAAACGCTCACAGCTACTGTTTGCTGCGCGCACGGAAAAGTCTCCCCTACGTGCTGCGAACTATTCACCATTCACACTCGAAACACACCAGAGACAGTGGACGACGCCG ]
[+] EMBL AL931050 [ cgaggCGACAGC AACTCCAATTTTCACGATATTGTACGATTTTCAAACAATTTAATATAAAACAGCTAGTCTACATACTTTTTGAAGGTAGATGTGTACCGCTTGACTTAGATCTTTGCCCACAATAGTAATAGTGTTGCGTGTTACCTATGCGTTAGGAGGTTGTTTCACTCTAATACCAAAGACTCGGCTGATTACGAGAACAGTACAGTAACATGATGGGACCAAACGCTCACAGCTACTGTTTGCTGCGCGCACGGAAAAGTCTCCCCTACGTGCTGCGAACTATTCACCATTCACACTCGAAACACACCAGAGACAGTGGACGACGCCGGGTGGTGGTAACGGGGCTCGGTGTAGTATCACCTGTCGGCTGCAATGTGGAAGCGGCCTGGCAAACCGATCCTCTCCGGTCAGTCAAAAAAGTTGGTCGACTGG ]
[+] EMBL BM641203 [ ccgCGAGAACAGTACAGTAACATGATGGGACCAAACGCTCACAGCTACTGTTTGCTGCGCGCACGGAAAAGTCTCCCCTACGTGCTGCGAACTATTCACCATTCACACTCGAAACACACCAGAGACAGTGGACGACGCCGGGTGGTGGTAACGGGGCTCGGTGTAGTATCACCTGTCGGCTGCAATGTGGAAGCGGCCTGGCAAA CGATCCTCTCCGGTCAGTC AAAAGTTGGTCGACTGGTGGGAGAAACGTACGACAAGCTTCCCTGCCGCGTAGCGGCCACAATCGACACGAACGACATCGATCTGGAAAAGTGTTTCTCCAAAACCGAGCTCAAAACGATGGCACGCGCTACCGCCTTTGCGTTGATCGCTGCCAAGGAGGCTCTCTCGAGGGCTAGCTGGATGCCGGGCGTGGAGGATGAAACCGCCTGCCAGCGCACCGGTGTTGCCATCGGTATGGGCATGGTAGATCTGATGGACATTTGCGAGACGAACGAAGCGCTCAAGAAGGGATACAACCGGGTGAGCCCATTTTTTGTGCCCCGCATCTTGCCCAACATGCCGGCCGGGCAGCTCAGCATCCCGGTACGGGGTTTCGCGGACCGAACCATGCCGTTTTCTACCGCCTGGTGCTACGGGTGCCCATGCCATAAG]
consensusID : consensus_5931#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 649 fasta sequence
[CCCGAGGTTAAAACTCCAATTTTCACGATATTGTACGATTTTCAAACAATTTAATATAAAACAGCTAGTTTCTACATACTATTTTGAAGGTAGATGTGTACCGCTTGACTTAGATCTTCGCCCACAATAGTAATAGTGTTGCGTGTTACCTATGCGTNAGGAGGTTGTTATCACTCTAATTACCAAAGGACTCGGGCTGATTTAACGAGAAACAGGTACCAGTAAACATGATTGGGACCAAAACGGCTCACAAGCTACTTGTNTTTGGCTGCCGCGCCACCGGAAAAAGTTCTCCCCCTAACGGTGCCTTGCGGAACTTATTCACCCAATCACCACTCCGAAAACACACCAGGANGACCAGTGGCACCGGCGCCGCGGCTGGTGGGTAAACCTGGGGCTACGGGTGTANGTTATCACCCCTGGTCCGGGCTGCACNNACTGGTGGCACANGCCGCGGCCCTGGACCAGAGAACCGGAATCCCNTTCCTNCACCGGTACCNAGTCCACAAAACAGGTTATCGGGGTCCCGAACCTTGGGCTTGGGGAACGAAAACGTTACGCACAAAGGCTTTNCCCCCTTGGGCCCGGCAGTACGCCGCGGCGCCACACAAATCCGGACCCACCGACACCGGACCATACCGCANATCCT]
[+] EMBL AL695646 [CCCGAGGTTAAAACTCCAATTTTCACGATATTGTACGATTTTCAAACAATTTAATATAAAACAGCTAGTTTCTACATACTATTTTGAAGGTAGATGTGTACCGCTTGACTTAGATCTTCGCCCACAATAGTAATAGTGTTGCGTGTTACCTATGCGTNAGGAGGTTGTTATCACTCTAATTACCAAAGGACTCGGGCTGATTTAACGAGAAACAGGTACCAGTAAACATGATTGGGACCAAAACGGCTCACAAGCTACTTGTNTTTGGCTGCCGCGCCACCGGAAAAAGTTCTCCCCCTAACGGTGCCTTGCGGAACTTATTCACCCAATCACCACTCCGAAAACACACCAGGANGACCAGTGGCACCGGCGCCGCGGCTGGTGGGTAAACCTGGGGCTACGGGTGTANGTTATCACCCCTGGTCCGGGCTGCACNNACTGGTGGCACANGCCGCGGCCCTGGACCAGAGAACCGGAATCCCNTTCCTNCACCGGTACCNAGTCCACAAAACAGGTTATCGGGGTCCCGAACCTTGGGCTTGGGGAACGAAAACGTTACGCACAAAGGCTTTNCCCCCTTGGGCCCGGCAGTACGCCGCGGCGCCACACAAATCCGGACCCACCGACACCGGACCATACCGCANATCCT]
consensusID : consensus_5931#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 316 fasta sequence
[TTTTTTTCATTTACGACAGCAAACTCCAATTTTCACGATATTGTACGATTTTCAAACAATTTAATATAAAACAGCTAGATTCTACGTACTTTTTGAAGGAGGTTGTTTCACTCTAATACCAAAGACTCGGCTGATAACGAGAACAGTACAGTAACATGATGGGACCAAACGCTCACAGCTACTGTTTGCTGCGCGCACGGAAAAGTCTCCCCTACGTGCTGCGAACTATTCACCAATCACACTCGAAACACACCAGAGACAGTGGACGGCGCCGGGTGGTGGTAACGGGGCTCGGTGTAGTATCACCTGTCGGCTG]
[+] EMBL AGA283832 [TTTTTTTCATTTACGACAGCAAACTCCAATTTTCACGATATTGTACGATTTTCAAACAATTTAATATAAAACAGCTAGATTCTACGTACTTTTTGAAGGAGGTTGTTTCACTCTAATACCAAAGACTCGGCTGATAACGAGAACAGTACAGTAACATGATGGGACCAAACGCTCACAGCTACTGTTTGCTGCGCGCACGGAAAAGTCTCCCCTACGTGCTGCGAACTATTCACCAATCACACTCGAAACACACCAGAGACAGTGGACGGCGCCGGGTGGTGGTAACGGGGCTCGGTGTAGTATCACCTGTCGGCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5931#0 ------TTTTTTACGACAGCAAACTCCAATTTTCACGATATTGTACGATTTTCAAACAAT 54
consensus_5931#2 TTTTTTTCATTTACGACAGCAAACTCCAATTTTCACGATATTGTACGATTTTCAAACAAT 60
consensus_5931#1 --------CCCGAGGTTA--AAACTCCAATTTTCACGATATTGTACGATTTTCAAACAAT 50
* * * ****************************************
consensus_5931#0 TTAATATAAAACAGCTAG--TCTACATACT-TTTTGAAGGTAGATGTGTACCGCTTGACT 111
consensus_5931#2 TTAATATAAAACAGCTAGATTCTACGTACT-TTTTGAAGG-------------------- 99
consensus_5931#1 TTAATATAAAACAGCTAGTTTCTACATACTATTTTGAAGGTAGATGTGTACCGCTTGACT 110
****************** ***** **** *********
consensus_5931#0 TAGATCTTTGCCCACAATAGTAATAGTGTTGCGTGTTACCTATGCGTTAGGAGGTTGTT- 170
consensus_5931#2 ---------------------------------------------------AGGTTGTT- 107
consensus_5931#1 TAGATCTTCGCCCACAATAGTAATAGTGTTGCGTGTTACCTATGCGTNAGGAGGTTGTTA 170
********
consensus_5931#0 TCACTCTAAT-ACCAAAG-ACTCGG-CTGATT--ACGAGAAC--AGTAC-AGTAA-CATG 221
consensus_5931#2 TCACTCTAAT-ACCAAAG-ACTCGG-CTGATA--ACGAGAAC--AGTAC-AGTAA-CATG 158
consensus_5931#1 TCACTCTAATTACCAAAGGACTCGGGCTGATTTAACGAGAAACAGGTACCAGTAAACATG 230
********** ******* ****** ***** ******* **** ***** ****
consensus_5931#0 AT-GGGACCAAAC--GCTCACA-GCTACT-------GTTTGCTGCGCGCACGGAAAAGTC 270
consensus_5931#2 AT-GGGACCAAAC--GCTCACA-GCTACT-------GTTTGCTGCGCGCACGGAAAAGTC 207
consensus_5931#1 ATTGGGACCAAAACGGCTCACAAGCTACTTGTNTTTGGCTGCCGCGCCACCGGAAAAAGT 290
** ********* ******* ****** * *** **** *******
consensus_5931#0 TCCCCTACGTGCTGCGAACTATTCACCATTCACACTCGA--AACACACCAGAGACAGTGG 328
consensus_5931#2 TCCCCTACGTGCTGCGAACTATTCACCAATCACACTCGA--AACACACCAGAGACAGTGG 265
consensus_5931#1 TCTCCCCCTAACGGTGCCTTGCGGAACTTATTCACCCAATCACCACTCCGAAAACACACC 350
** ** * * * * * * * *** * * * *** ** * ***
consensus_5931#0 ACGACGCCGGGTGGTGGTAACGGGGCTCGGTGTAGTATCACCTGTCGGCTGCAATGTGGA 388
consensus_5931#2 ACGGCGCCGGGTGGTGGTAACGGGGCTCGGTGTAGTATCACCTGTCGGCTG--------- 316
consensus_5931#1 AGGANGACCAGTGGCACCGGCGCCGCGGCTGGTGGGTAAACCTGG-GGCTACGG-GTGTA 408
* * * * **** ** ** ** * ***** ****
consensus_5931#0 AGCGGCCTGGC--AAACCGATCCTCTCCGGTCAGTCAAAAAAGTTGGTCGACTGGTGGGA 446
consensus_5931#2 ------------------------------------------------------------
consensus_5931#1 NGTTATCACCCCTGGTCCGGGCTGCACNNACTGGTGGCACANGCCGCGGCCCTGGACCAG 468
consensus_5931#0 GAAACGTACGACAAGCTTCCCTGCCGCGTAGCGGCCACAATCGACACGAACGACATCGAT 506
consensus_5931#2 ------------------------------------------------------------
consensus_5931#1 AGAACCGGAATCCCNTTCCTNCACCG-GTACCNAGTCCA--CAAAACAGGTTATCGGGGT 525
consensus_5931#0 CTGGAAAAGTGTTTCTCCAAAACCGAGCTCAAAACGATGGCACGCGCTACCGCCTTTGCG 566
consensus_5931#2 ------------------------------------------------------------
consensus_5931#1 CCCGAACCTTGGG-CTTGGGGAACGAAAACGTTACGCACAAAGGCTTTNCC-CCCTTGGG 583
consensus_5931#0 TTGATCGCTGCCAAGGAGGCTCTCTCGAGGGCTAGCTGGATGCCGGGCGTGGAGGATGAA 626
consensus_5931#2 ------------------------------------------------------------
consensus_5931#1 CCCGGCAGTACGCCGCGGCGCCACACAA-----ATCCGGAC-CCACCGACACCGGACCAT 637
consensus_5931#0 ACCGCCTGCCAGCGCACCGGTGTTGCCATCGGTATGGGCATGGTAGATCTGATGGACATT 686
consensus_5931#2 ------------------------------------------------------------
consensus_5931#1 ACCGCANATCCT------------------------------------------------ 649
consensus_5931#0 TGCGAGACGAACGAAGCGCTCAAGAAGGGATACAACCGGGTGAGCCCATTTTTTGTGCCC 746
consensus_5931#2 ------------------------------------------------------------
consensus_5931#1 ------------------------------------------------------------
consensus_5931#0 CGCATCTTGCCCAACATGCCGGCCGGGCAGCTCAGCATCCCGGTACGGGGTTTCGCGGAC 806
consensus_5931#2 ------------------------------------------------------------
consensus_5931#1 ------------------------------------------------------------
consensus_5931#0 CGAACCATGCCGTTTTCTACCGCCTGGTGCTACGGGTGCCCATGCCATAAG 857
consensus_5931#2 ---------------------------------------------------
consensus_5931#1 ---------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||