Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5950 cluster # 5950       Sequences # 5       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5950#0 length = 968 sequences # 1  
consensus_5950#1 length = 906 sequences # 2  
consensus_5950#2 length = 839 sequences # 1  
consensus_5950#3 length = 593 sequences # 1  

consensusID : consensus_5950#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 968
fasta sequence
                              [AGGCAGAATCGCCCCGAGGTTCGTTTATATGCATTTAAAGGCCAATTTTCACTGTTATATGCACCCAACACCACCAAGAAGGGAGAGGAACCGCTATAGGGGTTTAGCTACGTTTAGCAATTTTTTGACGAATNTTAGATGTGAATAAATATTAGCACTACGTATATATTAGTAGTGTAATAGTAGTATGTAATACCGAATAGGGAACGGAAATATACTTGCAACAATTATATAAAGCTACACGATCAACACAAACAAGCAAATTGAACTCAAACTCATCCAAGCTACTTCCATTCCGCGATTCTGTACACTATTCTGGACATAGTNCGGAGGCGGTGCAAAACACGAGCGGCATAAATCTATCTAACTATGCGACAAAACAATTGGGTCGNCACCCTCTACTCTTCACACAATAACGTCCAATTGCTAATCANCCTGAAACCGGCTGGGAGAAGGGAAACCAACCNGTAACCGNANACTACCCCGGCACCCCGNGCCCAACACAGGGCGGCCAACACACCACTATCCTCACTAAATCCGGGCCAACGCCCACNCACTACCCCGGCAACCCACAATCACCNCTATCAACGCAAACCCCAGGCCACNCGCCCGGCTCAGGCCANACCCCACACNCCCCCAACACACCNCGCAGTCCCAGGAACCCGGCAGGNAAACATCGGACCGCACAGCCACGGCTCCCAACACACACGGGCCCACGGCACAACCCCGCGCGCGCCTANACAAGNCAAACNACCGNCACACGACGCACCCCCCCCCACATCGCGCGCCCCCNAGGCCACCCAAGGNCCGCAACCAGNACTAACACCCCCCGGCCCNACACGCACACTCANCGCAACNCCCCNACACACCCACCCCCCCGCCAGACACCACGCACACCCAACAAGGCGAACAACACAAACGGGGCAAACACACGACACACAGCAACCGTAAACTTACAACCAAACACG]

[+] EMBL AL696067             [AGGCAGAATCGCCCCGAGGTTCGTTTATATGCATTTAAAGGCCAATTTTCACTGTTATATGCACCCAACACCACCAAGAAGGGAGAGGAACCGCTATAGGGGTTTAGCTACGTTTAGCAATTTTTTGACGAATNTTAGATGTGAATAAATATTAGCACTACGTATATATTAGTAGTGTAATAGTAGTATGTAATACCGAATAGGGAACGGAAATATACTTGCAACAATTATATAAAGCTACACGATCAACACAAACAAGCAAATTGAACTCAAACTCATCCAAGCTACTTCCATTCCGCGATTCTGTACACTATTCTGGACATAGTNCGGAGGCGGTGCAAAACACGAGCGGCATAAATCTATCTAACTATGCGACAAAACAATTGGGTCGNCACCCTCTACTCTTCACACAATAACGTCCAATTGCTAATCANCCTGAAACCGGCTGGGAGAAGGGAAACCAACCNGTAACCGNANACTACCCCGGCACCCCGNGCCCAACACAGGGCGGCCAACACACCACTATCCTCACTAAATCCGGGCCAACGCCCACNCACTACCCCGGCAACCCACAATCACCNCTATCAACGCAAACCCCAGGCCACNCGCCCGGCTCAGGCCANACCCCACACNCCCCCAACACACCNCGCAGTCCCAGGAACCCGGCAGGNAAACATCGGACCGCACAGCCACGGCTCCCAACACACACGGGCCCACGGCACAACCCCGCGCGCGCCTANACAAGNCAAACNACCGNCACACGACGCACCCCCCCCCACATCGCGCGCCCCCNAGGCCACCCAAGGNCCGCAACCAGNACTAACACCCCCCGGCCCNACACGCACACTCANCGCAACNCCCCNACACACCCACCCCCCCGCCAGACACCACGCACACCCAACAAGGCGAACAACACAAACGGGGCAAACACACGACACACAGCAACCGTAAACTTACAACCAAACACG]


>consensus_5950#0 AGGCAGAATCGCCCCGAGGTTCGTTTATATGCATTTAAAGGCCAATTTTCACTGTTATAT GCACCCAACACCACCAAGAAGGGAGAGGAACCGCTATAGGGGTTTAGCTACGTTTAGCAA TTTTTTGACGAATNTTAGATGTGAATAAATATTAGCACTACGTATATATTAGTAGTGTAA TAGTAGTATGTAATACCGAATAGGGAACGGAAATATACTTGCAACAATTATATAAAGCTA CACGATCAACACAAACAAGCAAATTGAACTCAAACTCATCCAAGCTACTTCCATTCCGCG ATTCTGTACACTATTCTGGACATAGTNCGGAGGCGGTGCAAAACACGAGCGGCATAAATC TATCTAACTATGCGACAAAACAATTGGGTCGNCACCCTCTACTCTTCACACAATAACGTC CAATTGCTAATCANCCTGAAACCGGCTGGGAGAAGGGAAACCAACCNGTAACCGNANACT ACCCCGGCACCCCGNGCCCAACACAGGGCGGCCAACACACCACTATCCTCACTAAATCCG GGCCAACGCCCACNCACTACCCCGGCAACCCACAATCACCNCTATCAACGCAAACCCCAG GCCACNCGCCCGGCTCAGGCCANACCCCACACNCCCCCAACACACCNCGCAGTCCCAGGA ACCCGGCAGGNAAACATCGGACCGCACAGCCACGGCTCCCAACACACACGGGCCCACGGC ACAACCCCGCGCGCGCCTANACAAGNCAAACNACCGNCACACGACGCACCCCCCCCCACA TCGCGCGCCCCCNAGGCCACCCAAGGNCCGCAACCAGNACTAACACCCCCCGGCCCNACA CGCACACTCANCGCAACNCCCCNACACACCCACCCCCCCGCCAGACACCACGCACACCCA ACAAGGCGAACAACACAAACGGGGCAAACACACGACACACAGCAACCGTAAACTTACAAC CAAACACG



consensusID : consensus_5950#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 906
fasta sequence
                              [CCGCACCCATCCACACACGAGCAAGATTCTTTCTGTGCAGCATCGCTAAGCGTCAATAAGGGTATAGCAACATAGCAATTAAGCAACAAACACACACACAGATAAATAAGCGCATTTGCATTTACAACTAGTATAATTGTATTTAAAAAGAGGCAAACCTGAGAACTTGAGAGCTTGGGGTGAAATCTGGTGGCAGTCGACCAAACCAAAGTAGTAGGTACTTCTAGTACAGTGTGTGTGTGTGTAACTCATCCTCATTCATTAAGCGTTGTATTTTGCAGCCATCCTTTTGCTTGCATTCGATGTGTGTTGGTTTTTGTCATGTACCATGTCGTAGGCGTTTATATGCATTTAAAGGCAATTTTTCACTGTTATATGCACCCAACACCACCCAGAAGGGAGAGGAACCGCTATTGAGGTATAGCTCGTTTAGCAATTTTTTGACGAATTTAGATGTGAATAAATTTAGCACTCGTTTTTGTGTGTTTGTGTATGTAATACCGAATAGGGAACGGAAATATACTTGCAAAATTATATAGAGCTACACGAAAAAAAAACAAGCAAATTGAACTCAAACTCATCCAACTACTTCCATTCCTGCGATTCTGTAATATTTGGAATGGTTTGGGGGCGGTGCAAAAACGAGCGCATGATCTATCTAATATGCGAAAAAATGGTGAAAATTATTTACAATAACGTCATGCTATAGCTGAAACGGTGGGTGGTACACGTACGAATCCGCCCCGGCAATTGGGCAAAACATTCTATTTCGGCCACCTATATTTCGTTCTCATCATCAGTACCCGCTGTGTAGCATCTATTTAAATGTTGTCGTGAATGTCATTGTCATTGCTGTACGGGTAATATCTTGGCCCTTTCGCCAGCACAGCACATACCGTAGATAGA]

[+] EMBL BM612500             [CCGCACCCATCCACACACGAGCAAGATTCTTTCTGTGCAGCATCGCTAAGCGTCAATAAGGGTATAGCAACATAGCAATTAAGCAACAAACACACACACAGATAAATAAGCGCATTTGCATTTACAACTAGTATAATTGTATTTAAAAAGAGGCAAACCTGAGAACTTGAGAGCTTGGGGTGAAATCTGGTGGCAGTCGACCAAACCAAAGTAGTAGGTACTTCTAGTACAGTGTGTGTGTGTGTAACTCATCCTCATTCATTAAGCGTTGTATTTTGCAGCCATCCTTTTGCTTGCATTCGATGTGTGTTGGTTTTTGTCATGTACCATGTCGTAGGCGTTTATATGCATTTAAAGGCAATTTTTCACTGTTATATGCACCCAACACCACCCAGAAGGGAGAGGAACCGCTATTGAGGTATAGCTCGTTTAGCAATTTTTTGACGAATTTAGATGTGAATAAATTTAGCACTCGTTTTTGTGTGTTTGTGTATGTAATACCGAATAGGGAACGGAAATATACTTGCAAAATTATATAGAGCTACACGAAAAAAAAACAAGCAAATTGAACTCAAACTCATCCAACTACTTCCATTCCTGCGATTCTGTAATATTTGGAATGGTTTGGGGGCGGTGCAAAAACGAGCGCATGATCTATCTAATATGCGAAAA                                                                                                                                                                                                                                          ]
[+] EMBL BX616228             [                                                                                                                                                                                                                                                                                          CATCCTATTGCTTGCATTCGATGTGTGTTGGTTTTTGTCATGTACCATGTCGTAGGCGTTTATATGCATTTAAAGGCAAATTTTCACTGTTATATGCACCCAACACCACCAAGAAGGGAGAGGAACCGCTATTGGGGTTTAGCTCGTTTAGCAATTTTTTGACGAATTTAGATGTGAATAAATTTAGCACTCGTTTTTGTGTGTTTGTGTATGTAATACCGAATAGGGAACGGAAATATACTTGCAAAATTATATAAAGCTACACGATAAAAAAACAAGCAAATTGAACTCAAACTCATCCAACTACTTCCATTCC GCGATTCTGTAATATTTGGAAT GTTT GGGGCGGTGCAAAAACGAGCGCATAATCTATCTAATATGCGAAAAAATGGTGAAAATTATTTACAATAACGTCATGCTATAGCTGAAACGGTGGGTGGTACACGTACGAATCCGCCCCGGCAATTGGGCAAAACATTCTATTTCGGCCACCTATATTTCGTTCTCATCATCAGTACCCGCTGTGTAGCATCTATTTAAATGTTGTCGTGAATGTCATTGTCATTGCTGTACGGGTAATATCTTGGCCCTTTCGCCAGCACAGCACATACCGTAGATAGA]


>consensus_5950#1 CCGCACCCATCCACACACGAGCAAGATTCTTTCTGTGCAGCATCGCTAAGCGTCAATAAG GGTATAGCAACATAGCAATTAAGCAACAAACACACACACAGATAAATAAGCGCATTTGCA TTTACAACTAGTATAATTGTATTTAAAAAGAGGCAAACCTGAGAACTTGAGAGCTTGGGG TGAAATCTGGTGGCAGTCGACCAAACCAAAGTAGTAGGTACTTCTAGTACAGTGTGTGTG TGTGTAACTCATCCTCATTCATTAAGCGTTGTATTTTGCAGCCATCCTTTTGCTTGCATT CGATGTGTGTTGGTTTTTGTCATGTACCATGTCGTAGGCGTTTATATGCATTTAAAGGCA ATTTTTCACTGTTATATGCACCCAACACCACCCAGAAGGGAGAGGAACCGCTATTGAGGT ATAGCTCGTTTAGCAATTTTTTGACGAATTTAGATGTGAATAAATTTAGCACTCGTTTTT GTGTGTTTGTGTATGTAATACCGAATAGGGAACGGAAATATACTTGCAAAATTATATAGA GCTACACGAAAAAAAAACAAGCAAATTGAACTCAAACTCATCCAACTACTTCCATTCCTG CGATTCTGTAATATTTGGAATGGTTTGGGGGCGGTGCAAAAACGAGCGCATGATCTATCT AATATGCGAAAAAATGGTGAAAATTATTTACAATAACGTCATGCTATAGCTGAAACGGTG GGTGGTACACGTACGAATCCGCCCCGGCAATTGGGCAAAACATTCTATTTCGGCCACCTA TATTTCGTTCTCATCATCAGTACCCGCTGTGTAGCATCTATTTAAATGTTGTCGTGAATG TCATTGTCATTGCTGTACGGGTAATATCTTGGCCCTTTCGCCAGCACAGCACATACCGTA GATAGA



consensusID : consensus_5950#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 839
fasta sequence
                              [GCAAGATCGCCCCACGGTTAAAACTAGTATAATTGTATTTACAAAGAGGCAAACCTGAGAACTTGAGAGCTTGGGGTGAAATCTGGTGGCAGTCGACCAAACCAAAGTAGTAGGTACTATCTAGTACAGTGTGTGTGTGTGTGTAACTACATACCTCATATCATTAAGCGTTGTATTATATAGCAGCCATCCTATAGCTATGCATTCGATGCTAGTGTANAGGATATATANNGTCATGTACCATGTCGTAGGCGTTTATATGCATTTAAAGGCAAATTTTCACTGTTATATGCACCCAACAACACCAAGAAGCGGAGAGGAACCGCTATTGGGGCTTCTAGACTCGCTTTAGCAAACNNATNTTTGACGAATTTAGACTGTGAACTANAACTTTAAGCACCTCGCTACCTACCGTGTGNTANACAGTCGTATGTAATACCGAATACGGAACGGAAATATACTTGCNACCACTTATCATAAAGCNTACACGANTAAAAAAAACAAGCANAATTGAACTCAAACTNCATCCAACTACATTCCATTCCGCGAATTCTGTAATATTATAGGGCACTGGTCTGGGCGCCCGCGGATGGCCCACAACAACGNACAACACGGAAGCCCGGCCCATTTANAACATTCCCTGNCAATACCTTCAACACTCAATTTGGCGCGCACGAACACAAACACATATGGGGCTCTCGGNACACACCAATCTCCCACTTCTNTACAACCACACTNCACANAACCCGGCTCCACATTGGGCCTTCAATTTAACGNGCCCTCGGCCACACAACCCCGGAGGCTGGCGCCGTACGGGAGCTAACCCACACGNGTCTAAC]

[+] EMBL AL697502             [GCAAGATCGCCCCACGGTTAAAACTAGTATAATTGTATTTACAAAGAGGCAAACCTGAGAACTTGAGAGCTTGGGGTGAAATCTGGTGGCAGTCGACCAAACCAAAGTAGTAGGTACTATCTAGTACAGTGTGTGTGTGTGTGTAACTACATACCTCATATCATTAAGCGTTGTATTATATAGCAGCCATCCTATAGCTATGCATTCGATGCTAGTGTANAGGATATATANNGTCATGTACCATGTCGTAGGCGTTTATATGCATTTAAAGGCAAATTTTCACTGTTATATGCACCCAACAACACCAAGAAGCGGAGAGGAACCGCTATTGGGGCTTCTAGACTCGCTTTAGCAAACNNATNTTTGACGAATTTAGACTGTGAACTANAACTTTAAGCACCTCGCTACCTACCGTGTGNTANACAGTCGTATGTAATACCGAATACGGAACGGAAATATACTTGCNACCACTTATCATAAAGCNTACACGANTAAAAAAAACAAGCANAATTGAACTCAAACTNCATCCAACTACATTCCATTCCGCGAATTCTGTAATATTATAGGGCACTGGTCTGGGCGCCCGCGGATGGCCCACAACAACGNACAACACGGAAGCCCGGCCCATTTANAACATTCCCTGNCAATACCTTCAACACTCAATTTGGCGCGCACGAACACAAACACATATGGGGCTCTCGGNACACACCAATCTCCCACTTCTNTACAACCACACTNCACANAACCCGGCTCCACATTGGGCCTTCAATTTAACGNGCCCTCGGCCACACAACCCCGGAGGCTGGCGCCGTACGGGAGCTAACCCACACGNGTCTAAC]


>consensus_5950#2 GCAAGATCGCCCCACGGTTAAAACTAGTATAATTGTATTTACAAAGAGGCAAACCTGAGA ACTTGAGAGCTTGGGGTGAAATCTGGTGGCAGTCGACCAAACCAAAGTAGTAGGTACTAT CTAGTACAGTGTGTGTGTGTGTGTAACTACATACCTCATATCATTAAGCGTTGTATTATA TAGCAGCCATCCTATAGCTATGCATTCGATGCTAGTGTANAGGATATATANNGTCATGTA CCATGTCGTAGGCGTTTATATGCATTTAAAGGCAAATTTTCACTGTTATATGCACCCAAC AACACCAAGAAGCGGAGAGGAACCGCTATTGGGGCTTCTAGACTCGCTTTAGCAAACNNA TNTTTGACGAATTTAGACTGTGAACTANAACTTTAAGCACCTCGCTACCTACCGTGTGNT ANACAGTCGTATGTAATACCGAATACGGAACGGAAATATACTTGCNACCACTTATCATAA AGCNTACACGANTAAAAAAAACAAGCANAATTGAACTCAAACTNCATCCAACTACATTCC ATTCCGCGAATTCTGTAATATTATAGGGCACTGGTCTGGGCGCCCGCGGATGGCCCACAA CAACGNACAACACGGAAGCCCGGCCCATTTANAACATTCCCTGNCAATACCTTCAACACT CAATTTGGCGCGCACGAACACAAACACATATGGGGCTCTCGGNACACACCAATCTCCCAC TTCTNTACAACCACACTNCACANAACCCGGCTCCACATTGGGCCTTCAATTTAACGNGCC CTCGGCCACACAACCCCGGAGGCTGGCGCCGTACGGGAGCTAACCCACACGNGTCTAAC



consensusID : consensus_5950#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 593
fasta sequence
                              [AGAATCGCCCGAGGNTCAACTCATCCAACTACTTCCATTCCGCGATCTGTAATATTTGGAATGTTTGGGGCGGTGCAAAAACGAGCGCATAATCTATCTAATATGCGAAAAAATGGTGAAAATTATTTACAATAACGTCATGCTATAGCTGAAACGGTGGGTGGTACACGTACGAATCCGCCCCGGCAATGGGCAAAACATTCTATTTCGGCCACCTATATTTCGTTCTCATCATCAGTACCCGCTGTGTAGCATCTATTTAAATGTTGTCGTGAATGTCATTGTCATTGCTGTACGGGTAATATCTCGGCCCTTTCGCCAGCACAGCACATACCGTAGATAGAGCAATACCGTAAAAAAAGGAAAAGGAAATTAGAATATTAAAATGGGACAAATATTCAAATTTTGTGCAAAACCCTTTCCGCGTTCGGAGAGCAAACGAGCGGCGGGGGCAAGAGCAAACAAAAAACTAGCGTTTAGTAGGATGATGGTGCGGTGTCACTTTTACAACATTCATTCGACTTGCTTATTCATATAAATGAAAATACAATAAAAGTACTGGAAAATCCATAAAACAAACAAAAAACACAACA]

[+] EMBL AL931785             [AGAATCGCCCGAGGNTCAACTCATCCAACTACTTCCATTCCGCGATCTGTAATATTTGGAATGTTTGGGGCGGTGCAAAAACGAGCGCATAATCTATCTAATATGCGAAAAAATGGTGAAAATTATTTACAATAACGTCATGCTATAGCTGAAACGGTGGGTGGTACACGTACGAATCCGCCCCGGCAATGGGCAAAACATTCTATTTCGGCCACCTATATTTCGTTCTCATCATCAGTACCCGCTGTGTAGCATCTATTTAAATGTTGTCGTGAATGTCATTGTCATTGCTGTACGGGTAATATCTCGGCCCTTTCGCCAGCACAGCACATACCGTAGATAGAGCAATACCGTAAAAAAAGGAAAAGGAAATTAGAATATTAAAATGGGACAAATATTCAAATTTTGTGCAAAACCCTTTCCGCGTTCGGAGAGCAAACGAGCGGCGGGGGCAAGAGCAAACAAAAAACTAGCGTTTAGTAGGATGATGGTGCGGTGTCACTTTTACAACATTCATTCGACTTGCTTATTCATATAAATGAAAATACAATAAAAGTACTGGAAAATCCATAAAACAAACAAAAAACACAACA]


>consensus_5950#3 AGAATCGCCCGAGGNTCAACTCATCCAACTACTTCCATTCCGCGATCTGTAATATTTGGA ATGTTTGGGGCGGTGCAAAAACGAGCGCATAATCTATCTAATATGCGAAAAAATGGTGAA AATTATTTACAATAACGTCATGCTATAGCTGAAACGGTGGGTGGTACACGTACGAATCCG CCCCGGCAATGGGCAAAACATTCTATTTCGGCCACCTATATTTCGTTCTCATCATCAGTA CCCGCTGTGTAGCATCTATTTAAATGTTGTCGTGAATGTCATTGTCATTGCTGTACGGGT AATATCTCGGCCCTTTCGCCAGCACAGCACATACCGTAGATAGAGCAATACCGTAAAAAA AGGAAAAGGAAATTAGAATATTAAAATGGGACAAATATTCAAATTTTGTGCAAAACCCTT TCCGCGTTCGGAGAGCAAACGAGCGGCGGGGGCAAGAGCAAACAAAAAACTAGCGTTTAG TAGGATGATGGTGCGGTGTCACTTTTACAACATTCATTCGACTTGCTTATTCATATAAAT GAAAATACAATAAAAGTACTGGAAAATCCATAAAACAAACAAAAAACACAACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5950#1      CCGCACCCATCCACACACGAGCAAGATTCTTTCTGTGCAGCATCGCTAAGCGTCAATAAG 60
consensus_5950#3      ------------------------------------------------------------
consensus_5950#0      ------------------------------------------------------------
consensus_5950#2      ------------------------------------------------------------
                                                                                  

consensus_5950#1      GGTATAGCAACATAGCAATTAAGCAACAAACACACACACAGATAAATAAGCGCATTTGCA 120
consensus_5950#3      ------------------------------------------------------------
consensus_5950#0      ------------------------------------------------------------
consensus_5950#2      ------------------------------------------------------------
                                                                                  

consensus_5950#1      TTTACAACTAGTATAATTGTATTTAAAAAGAGGCAAACCTGAGAACTTGAGAGCTTGGGG 180
consensus_5950#3      ------------------------------------------------------------
consensus_5950#0      ------------------------------------------------------------
consensus_5950#2      ------------------------------------------------------------
                                                                                  

consensus_5950#1      TGAAATCTGGTGGCAGTCGACCAAACCAAAGTAGTAGGTACTTCTAGTACAGTGTGTGTG 240
consensus_5950#3      ------------------------------------------------------------
consensus_5950#0      ------------------------------------------------------------
consensus_5950#2      ------------------------------------------------------------
                                                                                  

consensus_5950#1      TGTGTAACTCATCCTCATTCATTAAGCGTTGTATTTTGCAGCCATCCTTTTGCTTGCATT 300
consensus_5950#3      ------------------------------------------------------------
consensus_5950#0      ------------------------------------------------------------
consensus_5950#2      ------------------------------------------------------------
                                                                                  

consensus_5950#1      CGATGTGTGTTGGTTTTTGTCATGTACCATGTCGTAGGCGTTTATATGCATTTAAAGGCA 360
consensus_5950#3      ------------------------------------------------------------
consensus_5950#0      -----AGGCAGAATCGCCCCGAGGTTCGTTTATATGCATTTAAAGGCCAATTTTCACTGT 55
consensus_5950#2      ------------------------------------------------------------
                                                                                  

consensus_5950#1      ATTTTTCACTGTTATATGCACCCAACACCACCCAGAAGGGAGAGGAACCGCTATTGAGGT 420
consensus_5950#3      ------------------------------------------------------------
consensus_5950#0      TATATGCACCCAACACCACCAAGAAGGGAGAGGAACCGCTATAGGGGTTTAGCTACGTTT 115
consensus_5950#2      -----------------------------GCAAGATCGCCCCACGGTTAAAACTA-GTAT 30
                                                                                  

consensus_5950#1      ATAGCTCGTTTAGCAATTTTTTGACGAATTTAGATGTGAATAAATTTAGCACTCGTTTTT 480
consensus_5950#3      ------------------------------------------------------------
consensus_5950#0      AGCAATTTTTTGACGAATNTTAGATGTGAATAAATATTAGCACTACGTATATATTAGTAG 175
consensus_5950#2      AATTGTATTTACAAAGAGGC-AAACCTGAGAACTTGAGAGCTTGGGGTGAAATCTGGTGG 89
                                                                                  

consensus_5950#1      GTGTGTTTGTGTATGTAATACCGAATAGGGAACGGAAATATACTTGCAAA---ATTATAT 537
consensus_5950#3      ------------------------------------------------------------
consensus_5950#0      TGTAATAGTAGTATGTAATACCGAATAGGGAACGGAAATATACTTGCAACAATTATATAA 235
consensus_5950#2      CAGTCGACCAAACCAAAGTAGTAGGTACTATCTAGTACAGTGTGTGTG-----TGTGTGT 144
                                                                                  

consensus_5950#1      AGAGCTACACGAAAAAAAAACAAGCAAATTGAACTCAAACTCATCCAA-CTACTTCCATT 596
consensus_5950#3      --------------------AGAATCGCCCGAGGNTCAACTCATCCAA-CTACTTCCATT 39
consensus_5950#0      AGCTACACGATCAACACAAACAAGCAAATTGAACTCAAACTCATCCAAGCTACTTCCATT 295
consensus_5950#2      AACTACATACCTCATATCATTAAGC--GTTGTATTATATAGCAGCCATCCTATAGCTATG 202
                                            *       *      *   ** ***  ***   * ** 

consensus_5950#1      CCTGCGATTCTGT---AATATTTGGAATGG--TTTGGGGGCGGTGCAAAA-ACGAGCG-C 649
consensus_5950#3      CC-GCGAT-CTGT---AATATTTGGAATGT--TT--GGGGCGGTGCAAAA-ACGAGCG-C 88
consensus_5950#0      CC-GCGATTCTGTAC-ACTATTCTGGACATAGTNCGGAGGCGGTGCAAAACACGAGCGGC 353
consensus_5950#2      C-----ATTCGATGCTAGTGTANAGGATATA-TANNGTCATGTACCATGTCGTAGGCGTT 256
                      *     ** *  *   * * *   * *     *   *    *   **        ***  

consensus_5950#1      ATG-ATCTATCTAA-TATGCGAAAAAATGGTGAAAATTATTTACAATAA-CGTCATGCTA 706
consensus_5950#3      ATA-ATCTATCTAA-TATGCGAAAAAATGGTGAAAATTATTTACAATAA-CGTCATGCTA 145
consensus_5950#0      ATAAATCTATCTAACTATGCGACAAAACAATTGGGTCGNCACCCTCTACTCTTCACACAA 413
consensus_5950#2      -TATATGCATTTAA--AGGCAAATTTTCACTGTTATATGCACCCAACAA-CACCAAGAAG 312
                       *  **  ** ***  * ** *        *            *   *  *  **     

consensus_5950#1      TAGCTGAAACGGTGGGTGGTACACGTACGAATCCGCCCCGGCAATTGGGCAAAACATTCT 766
consensus_5950#3      TAGCTGAAACGGTGGGTGGTACACGTACGAATCCGCCCCGGCAAT-GGGCAAAACATTCT 204
consensus_5950#0      TAAC--GTCCAATTGCTAATCANCCTG--AAACCGGC-------TGGGAGAAGGGAAACC 462
consensus_5950#2      CGGA--GAGGAACCGCTATTGGGGCTTCTAGACTCGC-------TTTAGCAAACNNATNT 363
                                    * *  *     *   *  *   *       *     **        

consensus_5950#1      ATTTCGGCCACCTATATTTCGTTCTCATCATCAGTACC-CGCTGTGTAGCATCTATTTAA 825
consensus_5950#3      ATTTCGGCCACCTATATTTCGTTCTCATCATCAGTACC-CGCTGTGTAGCATCTATTTAA 263
consensus_5950#0      AACCNGTAACCGNANACTACCCCGGCACCCCGNGCCCAACACAGGGCGGCCAACACACCA 522
consensus_5950#2      TTGACGAATTTAGACTGTGAACTANAACTTTAAGCACCTCGCTACCTACCGTGTGNTANA 423
                           *       *   *        *      *  *  * *       *         *

consensus_5950#1      ATGTTGTCGTGAATGTCATTGTCATTGCTGTACGGGTAATATCTTGGC--CCTTTCGCCA 883
consensus_5950#3      ATGTTGTCGTGAATGTCATTGTCATTGCTGTACGGGTAATATCTCGGC--CCTTTCGCCA 321
consensus_5950#0      CTATCCTCACTAAATCCG----GGCCAACGCCCACNCACTACCCCGGCAACCCACAATCA 578
consensus_5950#2      CAGTCGTATGTAATACCG----AAT--ACGGAACGGAAATATACTTGCNACCACTTATCA 477
                         *  *    **   *            *       * **     **  **      **

consensus_5950#1      GCACAGCACATACCGTAGATAGA------------------------------------- 906
consensus_5950#3      GCACAGCACATACCGTAGATAGAGCAATACCGTAAAAAAAGGAAAAGGAAATTAGAATAT 381
consensus_5950#0      CCNCTATCAACGCAAACCCCAGGCCACNCGCCCGGCTCAGGCCANACCCCACACNCCCCC 638
consensus_5950#2      TAAA-GCNTACACGANTAAAAAAA-ACAAGCANAATTGAACTCAAACTNCATCCAACTAC 535
                               *  *       *                                       

consensus_5950#1      ------------------------------------------------------------
consensus_5950#3      TAAA-ATGGGACAAATATTCAAATTTTGTGCAAAACCCTTTCCGCGTTCGGAGAGCAAAC 440
consensus_5950#0      AACACACCNCGCAGTCCCAGGAACCCGGCAGGNAAACATCGGACCGCACAGCCACGGCTC 698
consensus_5950#2      ATTCCATTCCGCGAATTCTGTAATATTATAGGG---CACTGGTCTGGGCGCCCGCGGAT- 591
                                                                                  

consensus_5950#1      ------------------------------------------------------------
consensus_5950#3      GAGCGGCGGGGGCAAGAGCAAACAAAAAACTAGCGTTTAGTAGGATGATGGTGCGGTGTC 500
consensus_5950#0      CCAACACACACGGGCCCACGGCACAACCCCGCGCGCGCCTANACAAGNCAAACNACCGNC 758
consensus_5950#2      --GGCCCACAACAACGNACAACACGGAAGCCCG-GCCCATTTANAACATTCCCTGNCAAT 648
                                                                                  

consensus_5950#1      ------------------------------------------------------------
consensus_5950#3      ACTTTTACAACATTCATTCGACTTGCTTATTCATATAAATG---AAAATACAATAAAAGT 557
consensus_5950#0      ACACGACGCACCCCCCCCCACATCGCGCGCCCCCNAGGCCACCCAAGGNCCGCAACCAGN 818
consensus_5950#2      ACCTTCAACACTCAATTTGGCG-CGCACGAACACAAACACATATGGGGCTCTCGGNACAC 707
                                                                                  

consensus_5950#1      ------------------------------------------------------------
consensus_5950#3      ACTGGAAAATC----CATAAAACAAACAAAAAACACAACA-------------------- 593
consensus_5950#0      ACTAACACCCCCCGGCCCNACACGCACACTCANCGCAACNCCCCNACACACCCACCCCCC 878
consensus_5950#2      ACCAATCTCCCACTTCTNTACAACCACACTNCACANAACCCGGCTCCACATTGGGCCTTC 767
                                                                                  

consensus_5950#1      ------------------------------------------------------------
consensus_5950#3      ------------------------------------------------------------
consensus_5950#0      CGCCAGACACCACGCACACCCAACAAGGCGAACAACACAAACGGGGCAAACACACGACAC 938
consensus_5950#2      -----AATTTAACGNGCCCTCGGCCACACAACCCCGGAGGCTGGCGC---CGTACGGGAG 819
                                                                                  

consensus_5950#1      ------------------------------
consensus_5950#3      ------------------------------
consensus_5950#0      ACAGCAACCGTAAACTTACAACCAAACACG 968
consensus_5950#2      CTAAC--CCACACGNGTCTAAC-------- 839
                                                    




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)