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Anopheles gambiae
cluster # 5977 cluster # 5977       Sequences # 5       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5977#0 length = 1482 sequences # 1  
consensus_5977#1 length = 1147 sequences # 2  
consensus_5977#2 length = 1130 sequences # 1  
consensus_5977#3 length = 701 sequences # 1  

consensusID : consensus_5977#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1482
fasta sequence
                              [GCTTTTATCGATTGGAAAGCCGAAACAAGTGATCACTTGGTGCTCAATAAGGGTACACTCAAAACTGTCGATCCCGGCGGTATGATCGTTCCTAGTAGGAACAAAAATCAATCTACCCCATAGCTGTTGCGTNCAAGTGCGTACGCCGGCAACCTCCGTTGGTACGGTAATGAGCAGTGGTACAACGGGACCGAAGTTTACCAAGGTAGTGTTGACCAAACCAATGAACAGCGGTGCAACTAACACCAGCGTAGGTGACACAAACCTTTGGAAGCCGAAATTGGTNTATCCCCGGGTTGGCAAAGCATTCCGGAGGCACTTGGTCCAAACCANGGNTGCCTTGGCCNATTGTCTGGCCCAAAACCGGGGGCGGTTAACGTAGGGGAATAGCTCCCCCCCGTATTGGCTACTNGGTAAACCCGGGCCAANGGGCGCAACGGTTTACCCAAGGATTCCTTAATTCCAATTCCANTTCGAAAAAGTACCCCGGGTATCTATGGNGACAGTGGCGCAAACATTTCAACGAGATGGCCACAACAAGGGGNCTATTAAGGNTTGGCCGCAACAGCGCTATGGGTTGGCNCTNACGGGAAGAATCGTACACCNCGTTTGTTCCCAANGAACCCTAAACGGCTTGGGGGTCANCNAANGGCCACTNNCCGTGTAAACCCGGCAAACCCCNGGNGCACTAGGNGGGTCAACCAGGTGCGTATCACAGAGTNAACTGTTTAGTCATGACCGTCAACATTTCCCACAAGANCGACATAGCCCCAAAATAATACNCAAGTGGGGAGCCGCNNCGGATTTTCCGTTTTGGNTNCGACCAGCCTTTTACGTGGGTCCATACCCCCTTATTCNAGGAGCCCCNTTTTGGACCGCTGTGACCAAACGACAGCCCGGTGAGCCCAGATTATATTNTCCAAAATANCCACCCGGGTTATTNCTCGCGGTGAAAAANCGATTACAAAGACGGTGTTATANGGNAGGTCGGGTNNAAAATCCCGGGGCCGCNTAACCAACCGTCNTGTGGGTGNCTCATCACACCGAAGATATGGGGACTANTACGATGCGACANGTACACANCTTCATCGAAACNAACGAAGCCGTTTCACCTACAGTTANTGCTCCCNAACGTTTTTNCCGAGGGGGATTAAATGANCGATTGCNCGCCCCGAAAGTNNAACCGTTNGNTTCTCCCCCCAAACNCAAACCACCCAGGCGGGGCGACGACCTTCTGGGACCATCTGGNAACCANANCACGGNGGTNGTCCTCAAAGCTCAGNAGGGGATCTCANTTTNAGGGCCCACACACGATGAGTCNGANCATGGTGNCTGGCTGGGATCATAANTATANCCCTCCGTGGGTGTTTTTTNACAGATCCCACCTCTGGGAAAACAGCGGCGTATTTACCNACCNCCANNAAACTGGNACAAAAANCTNTGACGCNNGCTCCCAACNCAAACACCGTNGNGNNTAACCAC]

[+] EMBL AL693836             [GCTTTTATCGATTGGAAAGCCGAAACAAGTGATCACTTGGTGCTCAATAAGGGTACACTCAAAACTGTCGATCCCGGCGGTATGATCGTTCCTAGTAGGAACAAAAATCAATCTACCCCATAGCTGTTGCGTNCAAGTGCGTACGCCGGCAACCTCCGTTGGTACGGTAATGAGCAGTGGTACAACGGGACCGAAGTTTACCAAGGTAGTGTTGACCAAACCAATGAACAGCGGTGCAACTAACACCAGCGTAGGTGACACAAACCTTTGGAAGCCGAAATTGGTNTATCCCCGGGTTGGCAAAGCATTCCGGAGGCACTTGGTCCAAACCANGGNTGCCTTGGCCNATTGTCTGGCCCAAAACCGGGGGCGGTTAACGTAGGGGAATAGCTCCCCCCCGTATTGGCTACTNGGTAAACCCGGGCCAANGGGCGCAACGGTTTACCCAAGGATTCCTTAATTCCAATTCCANTTCGAAAAAGTACCCCGGGTATCTATGGNGACAGTGGCGCAAACATTTCAACGAGATGGCCACAACAAGGGGNCTATTAAGGNTTGGCCGCAACAGCGCTATGGGTTGGCNCTNACGGGAAGAATCGTACACCNCGTTTGTTCCCAANGAACCCTAAACGGCTTGGGGGTCANCNAANGGCCACTNNCCGTGTAAACCCGGCAAACCCCNGGNGCACTAGGNGGGTCAACCAGGTGCGTATCACAGAGTNAACTGTTTAGTCATGACCGTCAACATTTCCCACAAGANCGACATAGCCCCAAAATAATACNCAAGTGGGGAGCCGCNNCGGATTTTCCGTTTTGGNTNCGACCAGCCTTTTACGTGGGTCCATACCCCCTTATTCNAGGAGCCCCNTTTTGGACCGCTGTGACCAAACGACAGCCCGGTGAGCCCAGATTATATTNTCCAAAATANCCACCCGGGTTATTNCTCGCGGTGAAAAANCGATTACAAAGACGGTGTTATANGGNAGGTCGGGTNNAAAATCCCGGGGCCGCNTAACCAACCGTCNTGTGGGTGNCTCATCACACCGAAGATATGGGGACTANTACGATGCGACANGTACACANCTTCATCGAAACNAACGAAGCCGTTTCACCTACAGTTANTGCTCCCNAACGTTTTTNCCGAGGGGGATTAAATGANCGATTGCNCGCCCCGAAAGTNNAACCGTTNGNTTCTCCCCCCAAACNCAAACCACCCAGGCGGGGCGACGACCTTCTGGGACCATCTGGNAACCANANCACGGNGGTNGTCCTCAAAGCTCAGNAGGGGATCTCANTTTNAGGGCCCACACACGATGAGTCNGANCATGGTGNCTGGCTGGGATCATAANTATANCCCTCCGTGGGTGTTTTTTNACAGATCCCACCTCTGGGAAAACAGCGGCGTATTTACCNACCNCCANNAAACTGGNACAAAAANCTNTGACGCNNGCTCCCAACNCAAACACCGTNGNGNNTAACCAC]


>consensus_5977#0 GCTTTTATCGATTGGAAAGCCGAAACAAGTGATCACTTGGTGCTCAATAAGGGTACACTC AAAACTGTCGATCCCGGCGGTATGATCGTTCCTAGTAGGAACAAAAATCAATCTACCCCA TAGCTGTTGCGTNCAAGTGCGTACGCCGGCAACCTCCGTTGGTACGGTAATGAGCAGTGG TACAACGGGACCGAAGTTTACCAAGGTAGTGTTGACCAAACCAATGAACAGCGGTGCAAC TAACACCAGCGTAGGTGACACAAACCTTTGGAAGCCGAAATTGGTNTATCCCCGGGTTGG CAAAGCATTCCGGAGGCACTTGGTCCAAACCANGGNTGCCTTGGCCNATTGTCTGGCCCA AAACCGGGGGCGGTTAACGTAGGGGAATAGCTCCCCCCCGTATTGGCTACTNGGTAAACC CGGGCCAANGGGCGCAACGGTTTACCCAAGGATTCCTTAATTCCAATTCCANTTCGAAAA AGTACCCCGGGTATCTATGGNGACAGTGGCGCAAACATTTCAACGAGATGGCCACAACAA GGGGNCTATTAAGGNTTGGCCGCAACAGCGCTATGGGTTGGCNCTNACGGGAAGAATCGT ACACCNCGTTTGTTCCCAANGAACCCTAAACGGCTTGGGGGTCANCNAANGGCCACTNNC CGTGTAAACCCGGCAAACCCCNGGNGCACTAGGNGGGTCAACCAGGTGCGTATCACAGAG TNAACTGTTTAGTCATGACCGTCAACATTTCCCACAAGANCGACATAGCCCCAAAATAAT ACNCAAGTGGGGAGCCGCNNCGGATTTTCCGTTTTGGNTNCGACCAGCCTTTTACGTGGG TCCATACCCCCTTATTCNAGGAGCCCCNTTTTGGACCGCTGTGACCAAACGACAGCCCGG TGAGCCCAGATTATATTNTCCAAAATANCCACCCGGGTTATTNCTCGCGGTGAAAAANCG ATTACAAAGACGGTGTTATANGGNAGGTCGGGTNNAAAATCCCGGGGCCGCNTAACCAAC CGTCNTGTGGGTGNCTCATCACACCGAAGATATGGGGACTANTACGATGCGACANGTACA CANCTTCATCGAAACNAACGAAGCCGTTTCACCTACAGTTANTGCTCCCNAACGTTTTTN CCGAGGGGGATTAAATGANCGATTGCNCGCCCCGAAAGTNNAACCGTTNGNTTCTCCCCC CAAACNCAAACCACCCAGGCGGGGCGACGACCTTCTGGGACCATCTGGNAACCANANCAC GGNGGTNGTCCTCAAAGCTCAGNAGGGGATCTCANTTTNAGGGCCCACACACGATGAGTC NGANCATGGTGNCTGGCTGGGATCATAANTATANCCCTCCGTGGGTGTTTTTTNACAGAT CCCACCTCTGGGAAAACAGCGGCGTATTTACCNACCNCCANNAAACTGGNACAAAAANCT NTGACGCNNGCTCCCAACNCAAACACCGTNGNGNNTAACCAC



consensusID : consensus_5977#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1147
fasta sequence
                              [GTTCGCGAATCAGGCAACACGCAGATTATTTCTGGCCGGGGTAGCACGCCTATGCTGCTTCCTGCACTGAAACGAGACACTGCGCAGACAACACTATCGGCTGGCGCGTTGCATCAGCAAGGCAATGTGAATGTGAAATTGATTGAATCGAATCAACTTATTCATCTGAAACCGTCTACCGGAACGACGCAAAAGTTTTACTCCATAACATCAACCTCCAAACCAGTCATGTCCGTGATAGCAAACAGCAGTCCCGGAGTAAACGATGGTGCGGTAACGTCGGAGGAAATTAGCAGTCCACCGAAGTACACAATCGTGCGCAACACAGGATCCACGCCTACTGTGTTTAGCAATGTGAACGAATCTAATGTGGCTGCTGGGAAAGTTACGAAAGCTCTGT-CGGAGACTAATATTTTCGATCTTCCGATCGTATTTGCCGATAACGATGGTGTAATTCAGGAGGGCTCGCCTGAAAAACCGAAGCAAGCACAAGATACTCGACCAGCAGTAACAGCGCCCGCGTCTGTAGGCATTGCTGAAAACAATGCTAGCTCGGCACAGGCATCAGGCACGCGATTCGTCACACTGCAACAGCCCACTGGAAGTATGCCGCTGTCGATTGGAAAGCCGAAACAAGTGATCAACTTGGTGCTCAATAAGGGTACACTCAAAACTGTCGATCCCGGCGGTATGATCGTTCCTGTAGGAACAAAAATCAATCTCCCCATAGCTGTTGCGTCAAGTGCGTCGCCGGCAACCTCCGTTGGTACGGTAATGAGCAGTGGTACAACGGGACCGAAGTTTACCAAGGTAGTGTTGACCAAACCAATGAACAGCGGTGCAACTAACACCAGCGTGGTGAAAAACTTGAGCGAATTGTTATCCGGTGGCCAAGATCGAGATTGTCAAGCAGTGCTGGATGCGCCAAACACGGGCGTTACTGGAACCCCCGGTAGTCTGTAACCGCAAGGCAAAGTTCCAGAACTATCAATCATCANATCCCGNTTGGAGGGAATAACATCGCACCAAGGGTTAGTTGCACAATGNTGCAGGAAACACTTCAACAAGGTGGAAGANTCCGACGAACCGCACGCAANGTACAANTCTTATCACAAAACAACACAGTCCTCTGCATTGTCTGCTGGCA]

[+] EMBL BX618653             [GTTCGCGAATCAGGCAACACGCAGATTATTTCTGGCCGGGGTAGCACGCCTATGCTGCTTCCTGCACTGAAACGAGACACTGCGCAGACAACACTATCGGCTGGCGCGTTGCATCAGCAAGGCAATGTGAATGTGAAATTGATTGAATCGAATCAACTTATTCATCTGAAACCGTCTACCGGAACGACGCAAAAGTTTTACTCCATAACATCAACCTCCAAACCAGTCATGTCCGTGATAGCAAACAGCAGTCCCGGAGTAAACGATGGTGCGGTAACGTCGGAGGAAATTAGCAGTCCACCGAAGTACACAATCGTGCGCAACACAGGATCCACGCCTACTGTGTTTAGCAATGTGAACGAATCTAATGTGGCTGCTGGGAAAGTTACGAAAGCTCTGT CGGAGACTAATATTTTCGATCTTCCGATCGTATTTGCCGATAACGATGGTGTAATTCAGGAGGGCTCGCCTGAAAAACCGAAGCAAGCACAAGATACTCGACCAGCAGTAACAGCGCCCGCGTCTGTAGGCATTGCTGAAAACAATGCTAGCTCGGCACAGGCATCAGGCACGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AL933648             [                                                                                                                                                                                                                                                                                                                                                              cgagGTTAA GAATCTAATGTGGGTGNNCGGGAANTTACGAAAGCTCTGTCCGGAGACTAATATTTTCGATCTTCCGATCGTATTTGCCGATAACGATGGTGTAATTCAGGATGGCTCGCCTGAAAAACCGAAGCAAGCACAAGATACTCGACCAGCAGTAACAGCGCCAGCGTCTGTAGGCATTGCTGAAAACAATGCTAGCTCGGCACAGGCATCAGGCACGCGATTCGTCACACTGCAACAGCCCACTGGAAGTATGCCGCTGTCGATTGGAAAGCCGAAACAAGTGATCAACTTGGTGCTCAATAAGGGTACACTCAAAACTGTCGATCCCGGCGGTATGATCGTTCCTGTAGGAACAAAAATCAATCTCCCCATAGCTGTTGCGTCAAGTGCGTCGCCGGCAACCTCCGTTGGTACGGTAATGAGCAGTGGTACAACGGGACCGAAGTTTACCAAGGTAGTGTTGACCAAACCAATGAACAGCGGTGCAACTAACACCAGCGTGGTGAAAAACTTGAGCGAATTGTTATCCGGTGGCCAAGATCGAGATTGTCAAGCAGTGCTGGATGCGCCAAACACGGGCGTTACTGGAACCCCCGGTAGTCTGTAACCGCAAGGCAAAGTTCCAGAACTATCAATCATCANATCCCGNTTGGAGGGAATAACATCGCACCAAGGGTTAGTTGCACAATGNTGCAGGAAACACTTCAACAAGGTGGAAGANTCCGACGAACCGCACGCAANGTACAANTCTTATCACAAAACAACACAGTCCTCTGCATTGTCTGCTGGCA]


>consensus_5977#1 GTTCGCGAATCAGGCAACACGCAGATTATTTCTGGCCGGGGTAGCACGCCTATGCTGCTT CCTGCACTGAAACGAGACACTGCGCAGACAACACTATCGGCTGGCGCGTTGCATCAGCAA GGCAATGTGAATGTGAAATTGATTGAATCGAATCAACTTATTCATCTGAAACCGTCTACC GGAACGACGCAAAAGTTTTACTCCATAACATCAACCTCCAAACCAGTCATGTCCGTGATA GCAAACAGCAGTCCCGGAGTAAACGATGGTGCGGTAACGTCGGAGGAAATTAGCAGTCCA CCGAAGTACACAATCGTGCGCAACACAGGATCCACGCCTACTGTGTTTAGCAATGTGAAC GAATCTAATGTGGCTGCTGGGAAAGTTACGAAAGCTCTGTCGGAGACTAATATTTTCGAT CTTCCGATCGTATTTGCCGATAACGATGGTGTAATTCAGGAGGGCTCGCCTGAAAAACCG AAGCAAGCACAAGATACTCGACCAGCAGTAACAGCGCCCGCGTCTGTAGGCATTGCTGAA AACAATGCTAGCTCGGCACAGGCATCAGGCACGCGATTCGTCACACTGCAACAGCCCACT GGAAGTATGCCGCTGTCGATTGGAAAGCCGAAACAAGTGATCAACTTGGTGCTCAATAAG GGTACACTCAAAACTGTCGATCCCGGCGGTATGATCGTTCCTGTAGGAACAAAAATCAAT CTCCCCATAGCTGTTGCGTCAAGTGCGTCGCCGGCAACCTCCGTTGGTACGGTAATGAGC AGTGGTACAACGGGACCGAAGTTTACCAAGGTAGTGTTGACCAAACCAATGAACAGCGGT GCAACTAACACCAGCGTGGTGAAAAACTTGAGCGAATTGTTATCCGGTGGCCAAGATCGA GATTGTCAAGCAGTGCTGGATGCGCCAAACACGGGCGTTACTGGAACCCCCGGTAGTCTG TAACCGCAAGGCAAAGTTCCAGAACTATCAATCATCANATCCCGNTTGGAGGGAATAACA TCGCACCAAGGGTTAGTTGCACAATGNTGCAGGAAACACTTCAACAAGGTGGAAGANTCC GACGAACCGCACGCAANGTACAANTCTTATCACAAAACAACACAGTCCTCTGCATTGTCT GCTGGCA



consensusID : consensus_5977#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1130
fasta sequence
                              [CCCCTGCAGGTTAAAGCAGCACAAGATACTCGACCAGCAGTAACAGNGTCCAGCGTCTGTAGGCATTGCTAGAAAACAATGCTAGCTCGGCACAGGCATACAGGCACGCGATTCGTCACACTAGCAACAGCCGCTGGAAGTATGCCGCTGTACGATTGGAAAGCCGAAACAAGTAGATACAACTATGTGTGCTACAATAAGGGTACACTCAAAACTGTACGATCCCGGCGGTATGATACTGTATCCTGTAGGAACAACAAATCAATCTCCCCATAGCTGTTGCGTACCAAGTGCTGTNCGCCGGGAACCTCCGTTGTGTACGGTACTTGAGCAGTTGGTACAACGGGACCCGAAGTTTTACCCAAACGGTAAGTCGTATGGAACAACAACCAATTGGAGACAAGTNGGTTGCCAACCTTAACNAACCCAGCCGTCGCGTGCCNACNCAACCTTTGCAGCCGAAATATCGTCTAATACCCGGTGGCAAGATACGAGACTATGTCACCANGTGGCTTGGCCAATNGACGGCCCCACAAAACCGGAGGCAGTACAAACACTAAGGGGAANNACCNCCCCCNATCAGGACNAGCACAACCGNCAAAAAANGGCCACAAGANTACCCCACGCGAANCGACANACAACACNACATCCAACAAGACCCAGGACANGGNACGACGAAAANNAAAAAGCAAGACAAAACGNNAAGAAGGCCACCAGCGCCCNCAACACAANNNCAAAAACACAANCAACANNNACGGGAAGNCCCATCCCGACGCAGAACAACCCAGCACCAACNGCAAAANCGCNAANCGAACACACCCACAAACACCCNACAACCCAAACAACANGGAACCCCACCTAACCAGACAGAGGNAACANAGGGCGAANGACGCCGCCACNNGTCCATCAAACCNGACCCGANAAAGNCCNGNGGGCANCCCCCAACGGATAAAAAAGGAGACACGAAGAAAAACGCACAAAAACCCAGTCCGACGACCCCACACACACAAANGACGCANGCNANAAAACAACNCGNCGGAGACAACCCAGGNGAAAAGNAACAACANACTAACCAGCCAGGGCGACNCNGCACAAACANCACANCACACANGTCGACCTAACCNCNACCA]

[+] EMBL AL695253             [CCCCTGCAGGTTAAAGCAGCACAAGATACTCGACCAGCAGTAACAGNGTCCAGCGTCTGTAGGCATTGCTAGAAAACAATGCTAGCTCGGCACAGGCATACAGGCACGCGATTCGTCACACTAGCAACAGCCGCTGGAAGTATGCCGCTGTACGATTGGAAAGCCGAAACAAGTAGATACAACTATGTGTGCTACAATAAGGGTACACTCAAAACTGTACGATCCCGGCGGTATGATACTGTATCCTGTAGGAACAACAAATCAATCTCCCCATAGCTGTTGCGTACCAAGTGCTGTNCGCCGGGAACCTCCGTTGTGTACGGTACTTGAGCAGTTGGTACAACGGGACCCGAAGTTTTACCCAAACGGTAAGTCGTATGGAACAACAACCAATTGGAGACAAGTNGGTTGCCAACCTTAACNAACCCAGCCGTCGCGTGCCNACNCAACCTTTGCAGCCGAAATATCGTCTAATACCCGGTGGCAAGATACGAGACTATGTCACCANGTGGCTTGGCCAATNGACGGCCCCACAAAACCGGAGGCAGTACAAACACTAAGGGGAANNACCNCCCCCNATCAGGACNAGCACAACCGNCAAAAAANGGCCACAAGANTACCCCACGCGAANCGACANACAACACNACATCCAACAAGACCCAGGACANGGNACGACGAAAANNAAAAAGCAAGACAAAACGNNAAGAAGGCCACCAGCGCCCNCAACACAANNNCAAAAACACAANCAACANNNACGGGAAGNCCCATCCCGACGCAGAACAACCCAGCACCAACNGCAAAANCGCNAANCGAACACACCCACAAACACCCNACAACCCAAACAACANGGAACCCCACCTAACCAGACAGAGGNAACANAGGGCGAANGACGCCGCCACNNGTCCATCAAACCNGACCCGANAAAGNCCNGNGGGCANCCCCCAACGGATAAAAAAGGAGACACGAAGAAAAACGCACAAAAACCCAGTCCGACGACCCCACACACACAAANGACGCANGCNANAAAACAACNCGNCGGAGACAACCCAGGNGAAAAGNAACAACANACTAACCAGCCAGGGCGACNCNGCACAAACANCACANCACACANGTCGACCTAACCNCNACCA]


>consensus_5977#2 CCCCTGCAGGTTAAAGCAGCACAAGATACTCGACCAGCAGTAACAGNGTCCAGCGTCTGT AGGCATTGCTAGAAAACAATGCTAGCTCGGCACAGGCATACAGGCACGCGATTCGTCACA CTAGCAACAGCCGCTGGAAGTATGCCGCTGTACGATTGGAAAGCCGAAACAAGTAGATAC AACTATGTGTGCTACAATAAGGGTACACTCAAAACTGTACGATCCCGGCGGTATGATACT GTATCCTGTAGGAACAACAAATCAATCTCCCCATAGCTGTTGCGTACCAAGTGCTGTNCG CCGGGAACCTCCGTTGTGTACGGTACTTGAGCAGTTGGTACAACGGGACCCGAAGTTTTA CCCAAACGGTAAGTCGTATGGAACAACAACCAATTGGAGACAAGTNGGTTGCCAACCTTA ACNAACCCAGCCGTCGCGTGCCNACNCAACCTTTGCAGCCGAAATATCGTCTAATACCCG GTGGCAAGATACGAGACTATGTCACCANGTGGCTTGGCCAATNGACGGCCCCACAAAACC GGAGGCAGTACAAACACTAAGGGGAANNACCNCCCCCNATCAGGACNAGCACAACCGNCA AAAAANGGCCACAAGANTACCCCACGCGAANCGACANACAACACNACATCCAACAAGACC CAGGACANGGNACGACGAAAANNAAAAAGCAAGACAAAACGNNAAGAAGGCCACCAGCGC CCNCAACACAANNNCAAAAACACAANCAACANNNACGGGAAGNCCCATCCCGACGCAGAA CAACCCAGCACCAACNGCAAAANCGCNAANCGAACACACCCACAAACACCCNACAACCCA AACAACANGGAACCCCACCTAACCAGACAGAGGNAACANAGGGCGAANGACGCCGCCACN NGTCCATCAAACCNGACCCGANAAAGNCCNGNGGGCANCCCCCAACGGATAAAAAAGGAG ACACGAAGAAAAACGCACAAAAACCCAGTCCGACGACCCCACACACACAAANGACGCANG CNANAAAACAACNCGNCGGAGACAACCCAGGNGAAAAGNAACAACANACTAACCAGCCAG GGCGACNCNGCACAAACANCACANCACACANGTCGACCTAACCNCNACCA



consensusID : consensus_5977#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 701
fasta sequence
                              [GCAGAATCCCCGAGGTTAGAACGACGCAAAAGTTTTACTCCATAACATCAACCTCCAAACCAGTCATGTCCGTGATAGCAAACAGCAGTCCCGGAGTGAACGATGGTGCGGTAACGTCGGAGGAAATTAGCAGTCCACCGAAGTACACAATCGTGCGCAACACAGGATCCACGCCTACTGTGTTTAGCAATGTGAACGAGTCTAATGTGGCTGCTGGGAAAGTTACGAAAGCTCTGTCGGAGACTAATATTTTCGATCTTCCGATCGTATTTGCCGATAACGATGGTGTAATTCAGGAGGGCTCGCCTGAAAAACCGAAGCAAGCACAAGATACTCGACCAGCAGTAACAGCGCCAGCGTCTGTAGGCATTGCTGAAAACAATGCTAGCTCGGACAGGCATCAGGCACGCGATTCGTCACATTGCAACAGGCCGCTGGAAGTATGCCGCCTGTCGATTGGAAAGCCGAAACCAAGTGATCAACTTGGTGCTCAATAAGGGTACATCAAAACTGTCGATCCCGGCGGTATGATCGTACCTGTAGGAACAAAAACTCAAGTCTCCCCATAGCCTGTNTTGCGTCAAGTGCGTCGCGGCAACCTCCGTTGGTACGGTAATAAGCAGTGGTACACCGGGACCGAAGTTTACCAAGGTAGTGTTGACCAAAACCAATGAACACGGTGCACTAACACCAGCGTGGTG]

[+] EMBL AL695300             [GCAGAATCCCCGAGGTTAGAACGACGCAAAAGTTTTACTCCATAACATCAACCTCCAAACCAGTCATGTCCGTGATAGCAAACAGCAGTCCCGGAGTGAACGATGGTGCGGTAACGTCGGAGGAAATTAGCAGTCCACCGAAGTACACAATCGTGCGCAACACAGGATCCACGCCTACTGTGTTTAGCAATGTGAACGAGTCTAATGTGGCTGCTGGGAAAGTTACGAAAGCTCTGTCGGAGACTAATATTTTCGATCTTCCGATCGTATTTGCCGATAACGATGGTGTAATTCAGGAGGGCTCGCCTGAAAAACCGAAGCAAGCACAAGATACTCGACCAGCAGTAACAGCGCCAGCGTCTGTAGGCATTGCTGAAAACAATGCTAGCTCGGACAGGCATCAGGCACGCGATTCGTCACATTGCAACAGGCCGCTGGAAGTATGCCGCCTGTCGATTGGAAAGCCGAAACCAAGTGATCAACTTGGTGCTCAATAAGGGTACATCAAAACTGTCGATCCCGGCGGTATGATCGTACCTGTAGGAACAAAAACTCAAGTCTCCCCATAGCCTGTNTTGCGTCAAGTGCGTCGCGGCAACCTCCGTTGGTACGGTAATAAGCAGTGGTACACCGGGACCGAAGTTTACCAAGGTAGTGTTGACCAAAACCAATGAACACGGTGCACTAACACCAGCGTGGTG]


>consensus_5977#3 GCAGAATCCCCGAGGTTAGAACGACGCAAAAGTTTTACTCCATAACATCAACCTCCAAAC CAGTCATGTCCGTGATAGCAAACAGCAGTCCCGGAGTGAACGATGGTGCGGTAACGTCGG AGGAAATTAGCAGTCCACCGAAGTACACAATCGTGCGCAACACAGGATCCACGCCTACTG TGTTTAGCAATGTGAACGAGTCTAATGTGGCTGCTGGGAAAGTTACGAAAGCTCTGTCGG AGACTAATATTTTCGATCTTCCGATCGTATTTGCCGATAACGATGGTGTAATTCAGGAGG GCTCGCCTGAAAAACCGAAGCAAGCACAAGATACTCGACCAGCAGTAACAGCGCCAGCGT CTGTAGGCATTGCTGAAAACAATGCTAGCTCGGACAGGCATCAGGCACGCGATTCGTCAC ATTGCAACAGGCCGCTGGAAGTATGCCGCCTGTCGATTGGAAAGCCGAAACCAAGTGATC AACTTGGTGCTCAATAAGGGTACATCAAAACTGTCGATCCCGGCGGTATGATCGTACCTG TAGGAACAAAAACTCAAGTCTCCCCATAGCCTGTNTTGCGTCAAGTGCGTCGCGGCAACC TCCGTTGGTACGGTAATAAGCAGTGGTACACCGGGACCGAAGTTTACCAAGGTAGTGTTG ACCAAAACCAATGAACACGGTGCACTAACACCAGCGTGGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5977#1      ------------------------------------------------------------
consensus_5977#3      ------------------------------------------------------------
consensus_5977#2      ------------------------------------------------------------
consensus_5977#0      GCTTTTATCGATTGGAAAGCCGAAACAAGTGATCACTTGGTGCTCAATAAGGGTACACTC 60
                                                                                  

consensus_5977#1      ------------------------------------------------------------
consensus_5977#3      ------------------------------------------------------------
consensus_5977#2      ------------------------------------------------------------
consensus_5977#0      AAAACTGTCGATCCCGGCGGTATGATCGTTCCTAGTAGGAACAAAAATCAATCTACCCCA 120
                                                                                  

consensus_5977#1      ------------------------------------------------------------
consensus_5977#3      ------------------------------------------------------------
consensus_5977#2      ------------------------------------------------------------
consensus_5977#0      TAGCTGTTGCGTNCAAGTGCGTACGCCGGCAACCTCCGTTGGTACGGTAATGAGCAGTGG 180
                                                                                  

consensus_5977#1      GTTCGCGAATCAGGCAACACGCAGATTATTTCTGGCCGGGGTAGCACGCCTATGCTGCTT 60
consensus_5977#3      ------------------------------------------------------------
consensus_5977#2      ---------------------------------------------------CCCCTGCAG 9
consensus_5977#0      TACAACGGGACCGAAGTTTACCAAGGTAGTGTTGACCAAACCAATGAACA-GCGGTGCAA 239
                                                                                  

consensus_5977#1      CCTGCACTGAAACGAGACAC-TGCGCAGACAACACTATCGGCTGGCGCGTTGCATCAGC- 118
consensus_5977#3      ------------------------------------------------------------
consensus_5977#2      GTTAAAGCAGCACAAGATAC-TCGACCAGCAGTAACAGNGTCCAGCGTCTGTAGGCATTG 68
consensus_5977#0      CTAACACCAGCGTAGGTGACACAAACCTTTGGAAGCCGAAATTGGTNTATCCCCGGGTTG 299
                                                                                  

consensus_5977#1      ----AA------GGCAATGTGAATGTGAAATTGATTGAATCGAAT-CAACTTATTCATCT 167
consensus_5977#3      ----------------------------------------------------------GC 2
consensus_5977#2      CTAGAA------AACAATGCTAGCTCGGCACAGGCATACAGGCACGCGATTCGTCACACT 122
consensus_5977#0      GCAAAGCATTCCGGAGGCACTTGGTCCAAACCANGGNTGCCTTGGCCNATTGTCTGGCCC 359
                                                                                  

consensus_5977#1      GAAACCGTCTA---CCGGAACGACGCAAAAGTTTTACTCCATAACATCAACCTC-CAAAC 223
consensus_5977#3      AGAATCCCCGAGG-TTAGAACGACGCAAAAGTTTTACTCCATAACATCAACCTC-CAAAC 60
consensus_5977#2      AGCAACAGCCG---CTGGAAGTATGCCGCTGTACGATTGGAAAGCCGAAACAAG-TAGAT 178
consensus_5977#0      AAAACCGGGGGCGGTTAACGTAGGGGAATAGCTCCCCCCCGTATTGGCTACTNGGTAAAC 419
                         * *                  *     *           *      **     * * 

consensus_5977#1      -CAGTC--ATGTCCGTGATAGCAAAC---AGCAGTCCCGGAGTA-AACGATGGTGCGGTA 276
consensus_5977#3      -CAGTC--ATGTCCGTGATAGCAAAC---AGCAGTCCCGGAGTG-AACGATGGTGCGGTA 113
consensus_5977#2      ACAACT--ATGTGTGCTACAATAAG----GGTACACTCAAA--------ACTGTACGATC 224
consensus_5977#0      CCGGGCCAANGGGCGCAACGGTTTACCCAAGGATTCCTTAATTCCAATTCCANTTCGAAA 479
                       *      * *   *  *            * *  *    *            * **   

consensus_5977#1      ACGT---CGGAGGAAATTAGCAGTCCACCG---AAGTACACAATCGTGCGCAACACAGGA 330
consensus_5977#3      ACGT---CGGAGGAAATTAGCAGTCCACCG---AAGTACACAATCGTGCGCAACACAGGA 167
consensus_5977#2      CCGG---CGGTATGATACTGTATCCTGTAG---GAACAACAAATCAATCTCCCCATAGCT 278
consensus_5977#0      AAGTACCCCGGGTATCTATGGNGACAGTGGCGCAAACATTTCAACGAGATGGCCACAACA 539
                        *    * *         *    *    *    *  *    * *        ** *   

consensus_5977#1      TCCACGCCTACTGTGTTTAGCAATGTGAACGAATCTAATGTG-GCTGCTGGGAAAGTTAC 389
consensus_5977#3      TCCACGCCTACTGTGTTTAGCAATGTGAACGAGTCTAATGTG-GCTGCTGGGAAAGTTAC 226
consensus_5977#2      GTTGCGTACCAAGTGCTGTNCGCCGGGAACCTCCGTTGTGTACGGTACTTGAGCAGTTGG 338
consensus_5977#0      AGGGGNCTATTAAGGNTTGGCCGCAACAGCGCTATGGGTTGGCNCTNACGGGAAGAATCG 599
                                    * *   *      * *        *      *    *      *  

consensus_5977#1      GAAAGCTCTGTCGGAGACTAATATTTTCGATCTTCCGATCG--TATTTGCCGATAAC-GA 446
consensus_5977#3      GAAAGCTCTGTCGGAGACTAATATTTTCGATCTTCCGATCG--TATTTGCCGATAAC-GA 283
consensus_5977#2      TACAACGGGACCCGAAGTTT---TACCCAAACGGTAAGTCG--TATGGAACAACAAC-CA 392
consensus_5977#0      TACACCNCGTTTGTTCCCAANGAACCCTAAACGGCTTGGGGGTCANCNAANGGCCACTNN 659
                       * * *                       * *        *   *          **   

consensus_5977#1      TGGTGTAATTCAGGAGG--GCTCGCCTGAAAAACCGAAGCAAGCACAAGA-TACT----- 498
consensus_5977#3      TGGTGTAATTCAGGAGG--GCTCGCCTGAAAAACCGAAGCAAGCACAAGA-TACT----- 335
consensus_5977#2      -ATTGGAGACAAGTNGGTTGCCAACCTTAACNAACCCAGCCGTCGCGTGCCNACN----- 446
consensus_5977#0      CCGTGTAAACCCGGCAAACCCCNGGNGCACTAGGNGGGTCAACCAGGTGCGTATCACAGA 719
                         ** *     *       *       *          *   *    *   *       

consensus_5977#1      -CGACC-----AGCAGTAACAGCGCC-CGCGTCTGTAGGCATTGCTGAAAACAATGCTAG 551
consensus_5977#3      -CGACC-----AGCAGTAACAGCGCC-AGCGTCTGTAGGCATTGCTGAAAACAATGCTAG 388
consensus_5977#2      -CAACCTTTGCAGCCGAAATATCGTCTAATACCCGGTGGCAAGATACGAGACTATGTCAC 505
consensus_5977#0      GTNAACTGTTTAGTCATGACCGTCAACATTTCCCACAAGANCGACATAGCCCCAAAATAA 779
                         * *     **     *             *     *            * *    * 

consensus_5977#1      CTCG--GCACAGGCATCAGGC------ACGCGATTCGTCACACTGCAACAGCCCAC-TGG 602
consensus_5977#3      CTCG--G-ACAGGCATCAGGC------ACGCGATTCGTCACATTGCAACAGGCCGC-TGG 438
consensus_5977#2      CANGTGGCTTGGCCAATNGACGGCCCCACAAAACCGGAGGCAGTACAAACACTAAG-GGG 564
consensus_5977#0      TACNCAAGTGGGGAGCCGCNNCGGATTTTCCGTTTTGGNTNCGACCAGCCTTTTACGTGG 839
                                 *                        *        **           **

consensus_5977#1      AAGTAT-GCCGC-TGTC-----------GATTGGAA-AGCCGAAAC-AAGTGATCAACTT 647
consensus_5977#3      AAGTAT-GCCGCCTGTC-----------GATTGGAA-AGCCGAAACCAAGTGATCAACTT 485
consensus_5977#2      AANNACCNCCCCCNATCAG---------GACNAGCACAACCGNCAAAAAANGGCCACAAG 615
consensus_5977#0      GTCCATACCCCCTTATTCNAGGAGCCCCNTTTTGGACCGCTGTGACCAAACGA-CAGCCC 898
                          *   ** *   *                 * *   * *  *  **  *  **    

consensus_5977#1      GGTGCTCAATAAGGGTACACTCAAAACTGTCGATCCCGGCGGTATGATCGTTCCTGTAGG 707
consensus_5977#3      GGTGCTCAATAAGGGTACA-TCAAAACTGTCGATCCCGGCGGTATGATCGTACCTGTAGG 544
consensus_5977#2      ANTACCCCACGCGAANCGACANACAACACNACATCC-AACAAGACCCAGGACANGGNACG 674
consensus_5977#0      GGTGAGCCCAGATTATATTNTCCAAAATANCCACCCGGGT--TATTNCTCGCGGTGAAAA 956
                        *   *                 **      * **       *           * *  

consensus_5977#1      AACAAAAATC--AATCTCCCCATAGC---TGTTGCGTCAAGTGCGTCGCCGGCA-ACCTC 761
consensus_5977#3      AACAAAAACTCAAGTCTCCCCATAGCCTGTNTTGCGTCAAGTGCGTCGC-GGCA-ACCTC 602
consensus_5977#2      ACGAAAANNAAAAAGCAAGACAAAACGNNAAGAAGGCCACCAGCGCCCNCAACACAANNN 734
consensus_5977#0      ANCGATTACAAAGACGGTGTTATANGGNAGGTCGGGTNNAAAATCCCGGGGCCGCNTAAC 1016
                      *   *                * *           *          *     *       

consensus_5977#1      CGTTGGTACGGT-AATGAGCAGTGGTACAACGGGACCGAAGTTTACCAAGGT------AG 814
consensus_5977#3      CGTTGGTACGGT-AATAAGCAGTGGTACACCGGGACCGAAGTTTACCAAGGT------AG 655
consensus_5977#2      CAAAAACACAANCAACANNNACGGGAAGNCCCATCCCGACGCAGAACAACCC------AG 788
consensus_5977#0      CAACCGTCNTGTGGGTGNCTCATCACACCGAAGATATGGGGACTANTACGATGCGACANG 1076
                      *                         *          *  *   *  *           *

consensus_5977#1      TGTTGACC--AAA-CCAATGAAC--AGCGGTGCAACTAACACC-AGCGTGGTGAAAAAC- 867
consensus_5977#3      TGTTGACC--AAAACCAATGAAC--A-CGGTGCA-CTAACACC-AGCGTGGTG------- 701
consensus_5977#2      CACCAACNGCAAAANCGCNAANCG-AACACACCCACAAACACCCNACAACCCAAACAAC- 846
consensus_5977#0      TACACANCTTCATCGAAACNAACGAAGCCGTTTCACCTACAGTTANTGCTCCCNAACGTT 1136
                           *     *        * *  * *       *  ***                   

consensus_5977#1      ---TTGAGCGAATTGTTATCCGGT---GGCCAAGATCGAGATTGTCAAGCAGTGCTGGAT 921
consensus_5977#3      ------------------------------------------------------------
consensus_5977#2      ---ANGGAACCCCACCTAACCAGACAGAGGNAACANAGGGCGAANGACGCCGCCACNNGT 903
consensus_5977#0      TTTNCCGAGGGGGATTAAATGANCGATTGCNCGCCCCGAAAGTNNAACCGTTNGNTTCTC 1196
                                                                                  

consensus_5977#1      GCGCCAAACACGGGCGTTACTGG--AACCCCCGGTAGTCTGTAACCGCAAGGCAAAGTTC 979
consensus_5977#3      ------------------------------------------------------------
consensus_5977#2      CCATCAAACCNGACCCGANAAAG--NCCNGNGGGCANCCCCCAACGGATAAAAAAGGAGA 961
consensus_5977#0      CCCCCAAACNCAAACCACCCAGGCGGGGCGACGACCTTCTGGGACCATCTGGNAACCANA 1256
                                                                                  

consensus_5977#1      CAGAACTATCAAT-CATCANATCCCGNTTGGAGG-----GAATAACATCGCACCAAGGGT 1033
consensus_5977#3      ------------------------------------------------------------
consensus_5977#2      CACGAAGAAAAACGCACAAAAACCCAGTCCGACG-----ACCCCACA-CACACAAANGAC 1015
consensus_5977#0      NCACGGNGGTNGT-CCTCAAAGCTCAGNAGGGGATCTCANTTTNAGGGCCCACACACGAT 1315
                                                                                  

consensus_5977#1      TAGTTGCACAATGNTGCAGGAAACACTTCAACAAGGTGGAAGANTCCGACGAACCGCACG 1093
consensus_5977#3      ------------------------------------------------------------
consensus_5977#2      GCANGCNANAAAACAACNCGNCGGAGACAACCCAGGNGAAAAGNAACAACANACTAACCA 1075
consensus_5977#0      GAGTCNGANCATGGTGNCTGGCTGGGATCATAANTATANCCCTCCGTGGGTGTTTTTTNA 1375
                                                                                  

consensus_5977#1      CAANGTACAANTCTTATCACAAAACAACACAGTCCTCTGCAT-TGTCTG-CTGGCA---- 1147
consensus_5977#3      ------------------------------------------------------------
consensus_5977#2      GCCAGGGCGACNCNGCACAAACANCACANCACACANGTCGACCTAACCN-CNACCA---- 1130
consensus_5977#0      CAGATCCCACCTCTGGGAAAACAGCGGCGTATTTACCNACCNCCANNAAACTGGNACAAA 1435
                                                                                  

consensus_5977#1      -----------------------------------------------
consensus_5977#3      -----------------------------------------------
consensus_5977#2      -----------------------------------------------
consensus_5977#0      AANCTNTGACGCNNGCTCCCAACNCAAACACCGTNGNGNNTAACCAC 1482
                                                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)