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Anopheles gambiae
cluster # 6022 cluster # 6022       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6022#0 length = 1450 sequences # 5  

consensusID : consensus_6022#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1450
fasta sequence
                              [CCGGGGACAGAATGTAGTACAATGATCAACTTAAATGAAACAATACATCAAGAAATAGCAAACCAAGCTGTCAAGCATGAATCAAACAATACCATCAACTAGTGTATGATGTAACCACACATATTGAAAAATAGAACGCCGCACGGTCATGATCACGAACCTAGAAATAACGTAATAGTAACAAAACGCATAAAGCAACACCATGGATTGCAACGGTCGAAATATGTTCTTATCTTTCAGCATAGTTGCATAGCCACACACACACACACACACACACACACACACACACCTAACACATCTTGCAGAGCGATAAGATATGAGAAAGCTTTCATTCAATTTCCACACTAAAATTTCACATTAAGTTGTTGCTTAGCTTAGCTCTAGCTACATTTTTATCTCCTCGCGATGCATTGGTTAATCCAAACCCCCCTATCGTGTATGCGCTTTAAAGCGTGTTTTCAGAATTACAATTGCATCCTAACCAAAGATTCGGTAAAGCATACCCTACATGTATTAAATGAAATGAGACCCCACTTGATATGAAAGACACATTTTTGTAGTGTAACAAATCGGACATACAATTAACACATAGCTCAAACATCAAAGGAGATACAAGGAATAGTGAACAAATTATTAAACTATGGACCTACTATGGACATGCGGCATAAATAGCGGACATAGCACAGTCCACTTTAATTAATGATCATAGAAAAAAAAACCATTGAACTAAAGCGAAATTGATCGCTCCGGGCGTTATGTTTTGAGCTTCGGCACACGATCGAATGAAACCACTGTTTCGATGCAAAACAAAGCGAATAGTTTTAGCGAGCGACACCCCTCCCCCCATTCTCTCGGTTGTTGTGTGATAGCGTGTTGTGGGGCATAGTTTAAAACTCCCGGTAGAAGAGTAAACAGATAACAATATGCAGAATTTGTAAAGAGAACGGCATTAGGTGTGCTGTTTAGCCATATTTGTATTTACTTTGGGCGCGCACGATTTTGGTTCGGATATGGGACATATTACACC--TGTGTGCGCGTGTGTGTGTGTTTAAGATAGGAGCAAATGAAGATGATCATCGCAAAATGGGGAAGATCATATTCAGGTGAAGGAAAAAAAAGGTATATTAAATGATACACCACAAACCACCACAAGCTCTTAGCACTTACGGCACACGGTTTGACACAAACGAATGTAGGAAGAAAAGACGAATCATTATGCATTTATGTATGCACCAATCGCTATAGATAAAGAGAGCAAGGACACCTAAACGCAACGTGTAAAAACATTAGAGATGAGCAGCCTTCAAGAGGTTCGAGCCATTCCCCCGTCAACACAACACAATCGTTCGGAACGATGGAAACCGTTGTTTTTTAGACATGATTATCTTATTTTGACAGATCTCACGGCTCTGTTTCAAAAGCTAGTAGCTTGATTAAGTTGTTTTTCCCA]

[+] EMBL BM586647             [CCGGGGACAGAATGTAGTACAATGATCAACTTAAATGAAACAATACATCAAGAAATAGCAAACCAAGCTGTCAAGCATGAATCAAACAATACCATCAACTAGTGTATGATGTAACCACACATATTGAAAAATAGAACGCCGCACGGTCATGATCACGAACCTAGAAATAACGTAATAGTAACAAAACGCATAAAGCAACACCATGGATTGCAACGGTCGAAATATGTTCTTATCTTTCAGCATAGTTGCATAGCCACACACACACACACACACACACACACACACACACCTAACACATCTTGCAGAGCGATAAGATATGAGAAAGCTTTCATTCAATTTCCACACTAAAATTTCACATTAAGTTGTTGCTTAGCTTAGCTCTAGCTACATTTTTATCTCCTCGCGATGCATTGGTTAATCCAAACCCCCCTATCGTGTATGCGCTTTAAAGCGTGTTTTCAGAATTACAATTGCATCCTAACCAAAGATTCGGTAAAGCATACCCTACATGTATTAAATGAAATGAGACCCCACTTGATATGAAAGACACATTTTTGTAGTGTAACAAATCGGACATACAATTAACACATAGCTCAAACATCAAAGGAGATACAAGGAATAGTGAACAAATTATTAAACTATGGACCTACTATGGACATGCGGCATAAATAGCGGACATAGCACAGTCCACTTTAATTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM626272             [                                                                                                                                        ccgCGCACGGTCATGATCACGAACCTAGAAATAACGTAATAGTAACAAAACGCATAAAGCAACACCATGGATTGCAACGGTCGAAATATGTTCTTATCTTTCAGCATAGTTGCATAGCCACACACACACACACACACACACACACACACACACCTAACACATCTTGCAGAGCGATAAGATATGAGAAAGCTTTCATTCAATTTCCACACTAAAATTTCACATTAAGTTGTTGCTTAGCTTAGCTCTAGCTACATTTTTATCTCCTCGCGATGCATTGGTTAATCCAAACCCCCCTATCGTGTATGCGCTTTAAAGCGTGTTTTCAGAATTACAATTGCATCCTAACCAAAGATTCGGTAAAGCATACCCTACATGTATTAAATGAAATGAGACCCCACTTGATATGAAAGACACATTTTTGTAGTGTAACAAATCGGACATACAATTAACACATAGCTCAAACATCAAAGGAGATACAAGGAATAGTGAACAAATTATTAAACTATGGACCTACTATGGACATGCGGCATAAATAGCGGACATAGCACAGTCCACTTTAATTAATGATCATAGAAAAAAAAACCATTGAACTAAAGCGAAATTGATCGCTCCGGGCGTTATGTTTTGAGCTTCGGCACACGATCGAATGAAACCACTGTTTCGATGCAAAACAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS094BV             [                                                                                                                                                                                                                                                                                                                                     aaaaaaaTCAATTTCCACACTAAAATTTCACATTAAGTTGTTGCTTAGCTTAGCTCTAGCTACATTTTTATCTCCTCGCGATGCATTGGTTAATCCAAACCCCCCTATCGTGTATGCGCTTTAAAGCGTGTTTTCAGAATTACAATTGCATCCTAACCAAAGATTCGGTAAAGCATACCCTACATGTATTAAATGAAATGAGACCCCACTTGATATGAAAGACACATTTTTGTAGTGTAACAAATCGGACATACAATTAACACATAGCTCAAACATCAAAGGAGATACAAGGAATAGTGAACAAATTATTAAACTATGGACCTACTATGGACATGCGGCATAAATAGCGGACATAGCACAGTCCACTTTAATTAATGATCATAGAAAAAAAAACCATTGAACTAAAGCGAAATTGATCGCTCCGGGCGTTATGTTTTGAGCTTCGGCACACGATCGAATGAAACCACTGTTTCGATGCAAAACAAAGCGAATAGTTTTAGCGAGCGACACCCCTCCCCCCATTCTCTCGGTTGTTGTGTGATAGCGTGTTGTGGGGCATAGTTTAAAACTCCCGGTAGAAGAGTAAACAGATAACAATATGCAGAATTTGTAAAGAGAACGGCATTAGGTGTGCTGTTTAGCCATATTTGTATTTACTTTGGGCGCGCACGATTTTGGTTCGGATATGGGACATATTACACC  TGTGTGCGCGTGTGTGTGTGTTTAAGATAGGAGCAAATGAAGATGATCATCGCAAAATGGGGAAGATCATATTCAGGTGAAGGAAAAAAAAGGTATATTAAATGATACACCACAAACCACCACAAGCTCTTAGCACTTACGGCACACGGTTTGACACAAACGAATGTAGGAAGAAAAGACGAATCATTATGCATTTATGTATGCACCAATCGCTATAGATAAAGAGAGCAAGGACACCTAAACGCA                                                                                                                                                                                 ]
[+] EMBL BX621051             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAAGACACATTTTTGTAGTGTAACAAATCGGACATACAATTAACACATAGCTCAAACATCAAAGGAGATACAAGGAATAGTGAACAAATTATTAAACTATGGACCTACTATGGACATGCGGCATAAATAGCGGACATAGCACAGTCCACTTTAATTAATGATCATAG AAAAAAAACCATTGAACTAAAGCGAAATTGACCGCTCCGGGCGTTATGTTTTGAGCTTCGGCACACGATCGAATGAAACCATTGGTTCAATGCAAAACAAAGCGAATAGTTTTAGCGAGCGACACCCCTCCCCCCATTCTCTCGGTTGTTGTGTGATAGCGTGTTGTGGGGCATAGTTTAAAACTCCCGGTAGAAGAGTAAACAGATAACAATATGCAGAATTTGTAAAGAGAGCGGCATTAGGTGTGCTGTTTAGCCATATTTGTATTTACTTTGGGCGCGCACGATTTTGGTTAGGATATGGGACATGTTACACCTGTGTGTGCGCGTGTTTGTGTGTTTAAGATAGGAGCAAATGAAGATGATCATCGCAAAATGGGGAAGATCATATTCAGGTGAA GAAAAAAAAGGTATATTAAATGATACACCACAAACCACCACAAGCTCTTGGCACTTACGGCACACGGTTTGACACAAACGAATGTAGGAAGAAAAGACGAAGCATTATGCATTTATGTATGCACCAATCGCTATAGATAAAGAGAGCAAGGACACCT AACGCNACGTGTAAAAACATTAGAGATGAGC                                                                                                                                                        ]
[-] EMBL CNS094BW             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTAGAAGAGTAAACAGATAACAATATGCAGAATTTGTAAAGAGAACGGCATTAGGTGTGCTGTTTAGCCATATTTGTATTTACTTTGGGCGCGCACGATTTTGGTTCGGATATGGGACATATTACACC  TGTGTGCGCGTGTGTGTGTGTTTAAGATAGGAGCAAATGAAGATGATCATCGCAAAATGGGGAAGATCATATTCAGGTGAAGGAAAAAAAAGGTATATTAAATGATACACCACAAACCACCACAAGCTCTTAGCACTTACGGCACACGGTTTGACACAAACGAATGTAGGAAGAAAAGACGAATCATTATGCATTTATGTATGCACCAATCGCTATAGATAAAGAGAGCAAGGACACCTAAACGCAACGTGTAAAAACATTAGAGATGAGCAGCCTTCAAGAGGTTCGAGCCATTCCCCCGTCAACACAACACAATCGTTCGGAACGATGGAAACCGTTGTTTTTTAGACATGATTATCTTATTTTGACAGATCTCACGGCTCTGTTTCAAAAGCTAGTAGCTTGATTAAGTTGTTTTTCCCA]


>consensus_6022#0 CCGGGGACAGAATGTAGTACAATGATCAACTTAAATGAAACAATACATCAAGAAATAGCA AACCAAGCTGTCAAGCATGAATCAAACAATACCATCAACTAGTGTATGATGTAACCACAC ATATTGAAAAATAGAACGCCGCACGGTCATGATCACGAACCTAGAAATAACGTAATAGTA ACAAAACGCATAAAGCAACACCATGGATTGCAACGGTCGAAATATGTTCTTATCTTTCAG CATAGTTGCATAGCCACACACACACACACACACACACACACACACACACCTAACACATCT TGCAGAGCGATAAGATATGAGAAAGCTTTCATTCAATTTCCACACTAAAATTTCACATTA AGTTGTTGCTTAGCTTAGCTCTAGCTACATTTTTATCTCCTCGCGATGCATTGGTTAATC CAAACCCCCCTATCGTGTATGCGCTTTAAAGCGTGTTTTCAGAATTACAATTGCATCCTA ACCAAAGATTCGGTAAAGCATACCCTACATGTATTAAATGAAATGAGACCCCACTTGATA TGAAAGACACATTTTTGTAGTGTAACAAATCGGACATACAATTAACACATAGCTCAAACA TCAAAGGAGATACAAGGAATAGTGAACAAATTATTAAACTATGGACCTACTATGGACATG CGGCATAAATAGCGGACATAGCACAGTCCACTTTAATTAATGATCATAGAAAAAAAAACC ATTGAACTAAAGCGAAATTGATCGCTCCGGGCGTTATGTTTTGAGCTTCGGCACACGATC GAATGAAACCACTGTTTCGATGCAAAACAAAGCGAATAGTTTTAGCGAGCGACACCCCTC CCCCCATTCTCTCGGTTGTTGTGTGATAGCGTGTTGTGGGGCATAGTTTAAAACTCCCGG TAGAAGAGTAAACAGATAACAATATGCAGAATTTGTAAAGAGAACGGCATTAGGTGTGCT GTTTAGCCATATTTGTATTTACTTTGGGCGCGCACGATTTTGGTTCGGATATGGGACATA TTACACCTGTGTGCGCGTGTGTGTGTGTTTAAGATAGGAGCAAATGAAGATGATCATCGC AAAATGGGGAAGATCATATTCAGGTGAAGGAAAAAAAAGGTATATTAAATGATACACCAC AAACCACCACAAGCTCTTAGCACTTACGGCACACGGTTTGACACAAACGAATGTAGGAAG AAAAGACGAATCATTATGCATTTATGTATGCACCAATCGCTATAGATAAAGAGAGCAAGG ACACCTAAACGCAACGTGTAAAAACATTAGAGATGAGCAGCCTTCAAGAGGTTCGAGCCA TTCCCCCGTCAACACAACACAATCGTTCGGAACGATGGAAACCGTTGTTTTTTAGACATG ATTATCTTATTTTGACAGATCTCACGGCTCTGTTTCAAAAGCTAGTAGCTTGATTAAGTT GTTTTTCCCA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)