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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6034#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1518 fasta sequence
[AGAATCGCGCAGAGGTNATACACGCAACACACCTCAAACAGTGCCAGTTGTGTTGTTTTTAGGGAAAGTTATCCGAGTAAGTTGCATCCCTTCGACATGAAGTGGTCTACGTCGTTGCTGGGATTACTGTCCTTCATTGCCGTTGTGGTAAATGGAGCGGAAAATCCTCGCATAATCATTGTTGGTGCTGGTGCTGCCGGTGTTGCCGCCGCTAGCCGCCTCTATCAACGTGGCTTCCGTAATATTACCATTCTGGAAGCATCGCAACGAATTGGGGGACGCATTCGCACCANTCCGTTCGGTCCTGGTATTGTGGAGTTGGGTGGCCAATGGTGCCACGGTGAGGTCGGCAATGTTGTGTAACAGTTGG-CATCGGTATATTCGGGA-CTGCTCAAGTCATCCATCATTG-CGGATGAAG-AT-GCCGTTCTGATTCGTTCCA-GCGGTGCAAGGGTGNCGGAAGCTG-TGGCAGACCGTTTGCAAACTAT-GGCGGAA-GGAATCATCGAGTCAGATCAG-CGC--GACTCGTTTGNTGG--AAGTTT-GGGTGACTTCTTC-AAACAAAAAGTTAC--GCAAACTTTGGCAACACCTGCATACAAAGATATTAGTCGGGATCTTGCGGAACAGTTCCTTGTGTACTATCACAACTACGAGCGTGGCTATACGGCGTACGACTCGTGGTTTGAGGTGGCCGCGAGCGAAACTGACAGCTATGTAGAGCCGGCCGGCAACCAGGATATAGCGTGGAATGGAAAGAAAGGATTCTCCGCCATTCTGGACATTGTTTCGGGTAATTATCCAGGTACGACCAATACATCTCTTACTCCAGTGCCGATCAACAGCCTTGTGAAGTACGGTAAGTTCGTATCAAACATCCAGTGGAAAGGCTCATCGGATGGAGATGTAATCGTCAAGGCACAGGACGGCACTACCTACGAAGCTGATAACGTCATCGTTACCGTTTCGTTGGGTGTTCTGAAGGAAAACTCAGCCACAATGTTCTCGCCCGCACTACCTACCGTCAACCAGCAAGCCATCACCGGACTCTACTTTGGAACTGTGAACAAGATCTTCGTCCTCTTCGATGCACCTATTCCGGAGGACTTCCCCAACACCGTACATCTGCTGTGGTACAAGTCGGATCTTACCGCACTGCGTCAATCGCCCCACGCCTGGGCCGAAGCCATTTCTACCTTCTTCCGTATCGACAACCAACCGAACGTACTGATGGCCTGGATGAATGGTGCCGAGGGACGACGGGCCGAGTATCTCCTGAACGCTCCAATTANGGACGGTGTACTGCATCTGCTGAAAATATTCGGCAAAGGTCTCAAATTTGGCAACGTGACGGGTATTTTAAGATCCAAGTGGTCATCGGATCGTCTTTTTCCGTGGNTCGTACTCGAGCCGCTCGATCACGACGGAGAACTTGAATACGGGCGCACGTGCGCTCGGAACACCGGTACGAAACGCGGCCAACGAGCCCGTGTTGCTGTTTGCCGGTGAAGCTACGAATCCGGNACACTA]
[+] EMBL AL696270 [AGAATCGCGCAGAGGTNATACACGCAACACACCTCAAACAGTGCCAGTTGTGTTGTTTTTAGGGAAAGTTATCCGAGTAAGTTGCATCCCTTCGACATGAAGTGGTCTACGTCGTTGCTGGGATTACTGTCCTTCATTGCCGTTGTGGTAAATGGAGCGGAAAATCCTCGCATAATCATTGTTGGTGCTGGTGCTGCCGGTGTTGCCGCCGCTAGCCGCCTCTATCAACGTGGCTTCCGTAATATTACCATTCTGGAAGCATCGCAACGAATTGGGGGACGCATTCGCACCANTCCGTTCGGTCCTGGTATTGTGGAGTTGGGTGGCCAATGGTGCCACGGTGAGGTCGGCAATGTTGTGTAACAGTTGGCCATCGGTATATTCGGGACCTGCTCAAGTCATCCATCATTGCCGGATGAAGCATGGCCGTTCTGATTCGTTCCAGGCGGTGCAAGGGTGNCGGAAGCTGTTGGCAGACCGTTTGCAAACTATGGGCGGAAGGGAATCATCGAGTCAGATCAGCCGCCGGACTCGTTTGNTGGGAAAGTTTCGGGTGACTTCTTCAAAACAAAAAGTTAC ]
[+] EMBL BX624727 [ TTAGGGAAAGTTATCCGAGTAAGTTGCATCCCTTCGACATGAAGTGGTCTACGTCGTTGCTGGGATTACTGTCCTTCATTGCCGTTGTGGTAAATGGAGCGGAAAATCCTCGCATAATCATTGTTGGTGCTGGTGCTGCCGGTGTTGCCGCCGCTAGCCGCCTCTATCAACGTGGCTTCCGTAATATTACCATTCTGGAAGCATCGCAACGAATTGGGGGACGCATTCGCACCACTCCGTTCGGTCCTGGTATTGTGGAGTTGGGTGCCCAATGGTGCCACGGTGAGGTCGGCAATGTTGTGTACCAGTTGG CATCGGTATATCCGGGA CTGCTCAAGTCATCCATCATTG CGGATGAAG AT GCCGTTCTGATCCGTTCCA GCGGTGCAAGGGTGCCGGAAGCTG TGGCAGACCGTTTGCAAACTAT GGCGGAA GGAATCATCGAGTCAGATCAG CGC GACTCGTTTGCTGG AAGTTT GGGTGACTTCTTC ACAC AAAAG TACTGGCAAACTTTGGCAACACCTGCATACAAAGATATTAGTCGGGATCTTGCGGAACAGTTCCTTGTGTACTATCACAACTACGAGCGTGGCTATACGGCGTACGACTCGTGGTTTGAGGTGGCCGCGAGCGAAACTGACAGCTATGTAGAGCCGGCCGGCAACCAGGATATAGCGTGGAATGGAAAGAAAGGATTCTCCGCCAT ]
[+] EMBL BX625726 [ TTGTGTACTATCACAACTACGAGCGTGGCTATACGGCGTACGACTCGTGGTTTGAGGTGGCCGCGAGCGAAACTGACAGCTATGTAGAGCCGGCCGGCAACCAGGATATAGCGTGGAATGGAAAGAAAGGATTCTCCGCCATTCTGGACATTGTTTCGGGTAATTATCCAGGTACGACCAATACATCTCTTACTCCAGTGCCGATCAACAGCCTTGTGAAGTACGGTAAGTTCGTATCAAACATCCAGTGGAAAGGCTCATCGGATGGAGATGTAATCGTCAAGGCACAGGACGGCACTACCTACGAAGCTGATAACGTCATCGTTACCGTTTCGTTGGGTGTTCTGAAGGAAAACTCAGCCACAATGTTCTCGCCCGCACTACCTACCGTCAACCAGCAAGCCATCACCGGACTCTACTTTGGAACTGTGAACAAGATCTTCGTCCTCTTCGATGCACCTATTCCGGAGGACTTCCCCAACACCGTACATCTGCTGTGGTACAAGTCGGATCTTACCGCACTGCGTCAATCGCCCCACGCCTGGGCCGAAGCCATTTCTACCTTCTTCCGTATCGACAACCAACCGAACGTACTGATGGCCTGGATGAATGGTGCCGAGGGACGACGGGCCGAGTATCTCCTGAACGCTCCAATTANGGACGGTGTACTGCATCTGCTGAAAATATTCGGCAAAGGTCTCAAATTTGGCAACGTGACGGGTATTTTAAGATCCAAGTGGTCATCGGATCGTCTTTTTCCGTGGNTCGTACTCGAGCCGCTCGATCACGACGGAGAACTTGAATACGGGCGCACGTGCGCTCGGAACACCGGTA ]
[+] EMBL BX625411 [ TATGTAGAGCCGGCCGGCAACCAGGATATAGCGTGGAATGGAAAGAAAGGATTCTCCGCCATTCTGGACATTGTTTCGGGTAATTATCCAGGTACGACCAATACATCTCTTACTCCAGTGCCGATCAACAGCCTTGTGAAGTACGGTAAGTTCGTATCAAACATCCAGTGGAAAGGCTCATCGGATGGAGATGTAATCGTCAAGGCACAGGACGGCACTACCTACGAAGCTGATAACGTCATCGTTACCGTTTCGTTGGGTGTTCTGAAGGAAAACTCAGCCACAATGTTCTCGCCCGCACTACCTACCGTCAACCAGCAAGCCATCACCGGACTCTACTTTGGAACTGTGAACAAGATCTTCGTCCTCTTCGATGCACCTATTCCGGAGGACTTCCCCAACACCGTACATCTGCTGTGGTACAAGTCGGATCTTACCGCACTGCGTCAATCGCCCCACGCCTGGGCCGAAGCCATTTCTACCTTCTTCCGTATCGACAACCAACCGAACGTACTGATGGCCTGGATGAATGGTGCCGAGGGACGACGGGCCGAGTATCTCCTGAACGCTCCAATTAGGGACGGTGTACTGCATCTGCTGAAAATATTCGGCAAAGGTCTCAAATTTGGCAACGTGACGGGTATTTTAAGATCCAAGTGGTCATCGGATCGTC TTTTCCGTGGTTCGTACTCGAGCCGCTCGATCACGACGGAGAACTTGAATACGGGCGCACGTGCGCTCGGAACACCGGTACGAAACGCGGCCAACGAGCCCGTGTTGCTGTTTGCCGGTGAAGCTACGAATCCGGNACACTA]
consensusID : consensus_6034#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 628 fasta sequence
[CTCTTACTCCAGTGCCGATCAACAGCCTTGTGAAGTACGGCAAGTTCGTATCAAACATCCAGTGGAAGGGATCGCCGGAAGGAGATGTCATCGTCAAGACACAGGATGGCACTATCTACGAAGCCGATCATGTCATCGNAACTGTTTCTTTGGGTGTTCTGAAGGAAAACTCACCCACAATGTTCTCGCCAGCACTACCTACCGTCAACCAGCAAGCCATCACTGGACTCTATTTTGGCACTGNGAACAAGATCTTCGTCCTCTTCGATGCACCCATTCCGGAGGACTTCCCCAACACCGTACATCTGCTGTGGTACAAGTCGGATCTGACCGCACTGCGTCAATCGCCCCACGCCTGGGCCGAAGCCATCTCTACCTTCTTCCGTATCGACAACCAACCCAATGTACTGATGGCCTGGATGAATGGTGCCGAGGGACGGCGGGCTGAATCTTTGGATGATGCTACAATTAGAAATGGCGTACTGCATCTGTTGAAAATATTTGGCAACGGCCTTGACTNTGGCAACATTACGGGTCTGTTAAGATCCAAGTGGTCATCGGATCGTCTTTTCCGTGGTTCTTACTCGAGCCGCTCGATCACGACGGAGAACTTGAATACGGGCGCACG]
[+] EMBL BX624720 [CTCTTACTCCAGTGCCGATCAACAGCCTTGTGAAGTACGGCAAGTTCGTATCAAACATCCAGTGGAAGGGATCGCCGGAAGGAGATGTCATCGTCAAGACACAGGATGGCACTATCTACGAAGCCGATCATGTCATCGNAACTGTTTCTTTGGGTGTTCTGAAGGAAAACTCACCCACAATGTTCTCGCCAGCACTACCTACCGTCAACCAGCAAGCCATCACTGGACTCTATTTTGGCACTGNGAACAAGATCTTCGTCCTCTTCGATGCACCCATTCCGGAGGACTTCCCCAACACCGTACATCTGCTGTGGTACAAGTCGGATCTGACCGCACTGCGTCAATCGCCCCACGCCTGGGCCGAAGCCATCTCTACCTTCTTCCGTATCGACAACCAACCCAATGTACTGATGGCCTGGATGAATGGTGCCGAGGGACGGCGGGCTGAATCTTTGGATGATGCTACAATTAGAAATGGCGTACTGCATCTGTTGAAAATATTTGGCAACGGCCTTGACTNTGGCAACATTACGGGTCTGTTAAGATCCAAGTGGTCATCGGATCGTCTTTTCCGTGGTTCTTACTCGAGCCGCTCGATCACGACGGAGAACTTGAATACGGGCGCACG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6034#0 AGAATCGCGCAGAGGTNATACACGCAACACACCTCAAACAGTGCCAGTTGTGTTGTTTTT 60
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 AGGGAAAGTTATCCGAGTAAGTTGCATCCCTTCGACATGAAGTGGTCTACGTCGTTGCTG 120
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 GGATTACTGTCCTTCATTGCCGTTGTGGTAAATGGAGCGGAAAATCCTCGCATAATCATT 180
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 GTTGGTGCTGGTGCTGCCGGTGTTGCCGCCGCTAGCCGCCTCTATCAACGTGGCTTCCGT 240
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 AATATTACCATTCTGGAAGCATCGCAACGAATTGGGGGACGCATTCGCACCANTCCGTTC 300
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 GGTCCTGGTATTGTGGAGTTGGGTGGCCAATGGTGCCACGGTGAGGTCGGCAATGTTGTG 360
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 TAACAGTTGGCATCGGTATATTCGGGACTGCTCAAGTCATCCATCATTGCGGATGAAGAT 420
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 GCCGTTCTGATTCGTTCCAGCGGTGCAAGGGTGNCGGAAGCTGTGGCAGACCGTTTGCAA 480
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 ACTATGGCGGAAGGAATCATCGAGTCAGATCAGCGCGACTCGTTTGNTGGAAGTTTGGGT 540
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 GACTTCTTCAAACAAAAAGTTACGCAAACTTTGGCAACACCTGCATACAAAGATATTAGT 600
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 CGGGATCTTGCGGAACAGTTCCTTGTGTACTATCACAACTACGAGCGTGGCTATACGGCG 660
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 TACGACTCGTGGTTTGAGGTGGCCGCGAGCGAAACTGACAGCTATGTAGAGCCGGCCGGC 720
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 AACCAGGATATAGCGTGGAATGGAAAGAAAGGATTCTCCGCCATTCTGGACATTGTTTCG 780
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 GGTAATTATCCAGGTACGACCAATACATCTCTTACTCCAGTGCCGATCAACAGCCTTGTG 840
consensus_6034#1 ----------------------------CTCTTACTCCAGTGCCGATCAACAGCCTTGTG 32
********************************
consensus_6034#0 AAGTACGGTAAGTTCGTATCAAACATCCAGTGGAAAGGCTCATCGGATGGAGATGTAATC 900
consensus_6034#1 AAGTACGGCAAGTTCGTATCAAACATCCAGTGGAAGGGATCGCCGGAAGGAGATGTCATC 92
******** ************************** ** ** **** ******** ***
consensus_6034#0 GTCAAGGCACAGGACGGCACTACCTACGAAGCTGATAACGTCATCGTTACCGTTTCGTTG 960
consensus_6034#1 GTCAAGACACAGGATGGCACTATCTACGAAGCCGATCATGTCATCGNAACTGTTTCTTTG 152
****** ******* ******* ********* *** * ******* ** ***** ***
consensus_6034#0 GGTGTTCTGAAGGAAAACTCAGCCACAATGTTCTCGCCCGCACTACCTACCGTCAACCAG 1020
consensus_6034#1 GGTGTTCTGAAGGAAAACTCACCCACAATGTTCTCGCCAGCACTACCTACCGTCAACCAG 212
********************* **************** *********************
consensus_6034#0 CAAGCCATCACCGGACTCTACTTTGGAACTGTGAACAAGATCTTCGTCCTCTTCGATGCA 1080
consensus_6034#1 CAAGCCATCACTGGACTCTATTTTGGCACTGNGAACAAGATCTTCGTCCTCTTCGATGCA 272
*********** ******** ***** **** ****************************
consensus_6034#0 CCTATTCCGGAGGACTTCCCCAACACCGTACATCTGCTGTGGTACAAGTCGGATCTTACC 1140
consensus_6034#1 CCCATTCCGGAGGACTTCCCCAACACCGTACATCTGCTGTGGTACAAGTCGGATCTGACC 332
** ***************************************************** ***
consensus_6034#0 GCACTGCGTCAATCGCCCCACGCCTGGGCCGAAGCCATTTCTACCTTCTTCCGTATCGAC 1200
consensus_6034#1 GCACTGCGTCAATCGCCCCACGCCTGGGCCGAAGCCATCTCTACCTTCTTCCGTATCGAC 392
************************************** *********************
consensus_6034#0 AACCAACCGAACGTACTGATGGCCTGGATGAATGGTGCCGAGGGACGACGGGCCGAGTAT 1260
consensus_6034#1 AACCAACCCAATGTACTGATGGCCTGGATGAATGGTGCCGAGGGACGGCGGGCTGAATCT 452
******** ** *********************************** ***** ** * *
consensus_6034#0 CTCCTGAACGCTCCAATTANGGACGGTGTACTGCATCTGCTGAAAATATTCGGCAAAGGT 1320
consensus_6034#1 TTGGATGATGCTACAATTAGAAATGGCGTACTGCATCTGTTGAAAATATTTGGCAACGGC 512
* * *** ****** * ** ************ ********** ***** **
consensus_6034#0 CTCAAATTTGGCAACGTGACGGGTATTTTAAGATCCAAGTGGTCATCGGATCGTCTTTTT 1380
consensus_6034#1 CTTGACTNTGGCAACATTACGGGTCTGTTAAGATCCAAGTGGTCATCGGATCGTCTTTT- 571
** * * ******* * ****** * ********************************
consensus_6034#0 CCGTGGNTCGTACTCGAGCCGCTCGATCACGACGGAGAACTTGAATACGGGCGCACGTGC 1440
consensus_6034#1 CCGTGGTTCTTACTCGAGCCGCTCGATCACGACGGAGAACTTGAATACGGGCGCACG--- 628
****** ** ***********************************************
consensus_6034#0 GCTCGGAACACCGGTACGAAACGCGGCCAACGAGCCCGTGTTGCTGTTTGCCGGTGAAGC 1500
consensus_6034#1 ------------------------------------------------------------
consensus_6034#0 TACGAATCCGGNACACTA 1518
consensus_6034#1 ------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||