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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_609#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 744 fasta sequence
[GCCGCCTGCTCCATCGAGAACCTGATGGACGACGAGTTTTGGTTGCATCTGAACGACCGACAATACTACGTTAAGCCACCGAAGCGTGAAAAAATTACCTCAGAAGAAATCACTAGACTAGGCGACGTACAGGCACTGGTGGCACAGCTGTACGAGGCACTGCACGTGGGCGAACATCAGGTGCAGAAGGAGCGCGAACTGAACGGCAAGCTGGAGCAGTTGAACGAGAAGCTCGGCCCATTGGAAGCGAAAAAGAATGAACTCGACCAGAAAGCGGCCCGCAAGACGAATGCCCTGACCTGGGTCGGGCTGGGCCTGATGTCGGTACAGTTCGGTGTGCTCGCCCGGCTAACCTGGTGGGAATACTCCTGGGACATTATGGAGCCGGTGACGTACTTCGTCACGTACGGTACGGCGATGGCCGCGTACGCTTACTTCGTGCTAACGAAGCAGGTGAGTGGTTTTGAGTGGTTTAATCCCACACACACACAAACCCATTTGACGTCTCACATCTGCGTTTACCTTGTAGGAATATCTGCTGCCGGACGTGAAAGACCGCCAGCATCTGATCACGCTGCACAAGGCGGCCAAGAAGGCGGGCGTCAATCTGGCCGAGTACAACGACATCAAGCGGCAGATCGCGGAGATCGAGCACGATCTGCGCCGGCTGCGCGACCCACTGTACATGCATCTACCGGCGCCGCCGCCAAAGACGAAAACGTTCAGCGCAAGCGAGATTGCGTT]
[+] EMBL BX621397 [GCCGCCTGCTCCATCGAGAACCTGATGGACGACGAGTTTTGGTTGCATCTGAACGACCGACAATACTACGTTAAGCCACCGAAGCGTGAAAAAATTACCTCAGAAGAAATCACTAGACTAGGCGACGTACAGGCACTGGTGGCACAGCTGTACGAGGCACTGCACGTGGGCGAACATCAGGTGCAGAAGGAGCGCGAACTGAACGGCAAGCTGGAGCAGTTGAACGAGAAGCTCGGCCCATTGGAAGCGAAAAAGAATGAACTCGACCAGAAAGCGGCCCGCAAGACGAATGCCCTGACCTGGGTCGGGCTGGGCCTGATGTCGGTACAGTTCGGTGTGCTCGCCCGGCTAACCTGGTGGGAATACTCCTGGGACATTATGGAGCCGGTGACGTACTTCGTCACGTACGGTACGGCGATGGCCGCGTACGCTTACTTCGTGCTAACGAAGCAGGTGAGTGGTTTTGAGTGGTTTAATCCCACACACACACAAACCCATTTGACGTCTCACATCTGCGTTTACCTTGTAGGAATATCTGCTGCCGGACGTGAAAGACCGCCAGCATCTGATCACGCTGCACAAGGCGGCCAAGAAGGCGGGCGTCAATCTGGCCGAGTACAACGACATCAAGCGGCAGATCGCGGAGATCGAGCACGATCTGCGCCGGCTGCGCGACCCACTGTACATGCATCTACCGGCGCCGCCGCCAAAGACGAAAACGTTCAGCGCAAGCGAGATTGCGTT]
consensusID : consensus_609#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 534 fasta sequence
[CGAGAACCTGATGGACGACGAGTTTTGGTTGCATCTGAACGACCGACAATACTACGTTAAGCCACCGAAGCGTGAAAAAATTACCTCAGAAGAAATCACTAGACTAGGCGACGTACAGGCACTGGTGGCACAGCTGTACGAGGCACTGCACGTGGGCGAACATCAGGTGCAGAAGGAGCGCGAACTGAACGGCAAGCTGGAGCAGTTGAACGAGAAGCTCGGCCCATTGGAAGCGAAAAAGAATGAACTCGACCAGAAAGCGGCCCGCAAGACGAATGCCCTGACCTGGGTCGGGCTGGGCCTGATGTCGGTACAGTTCGGTGTGCTCGCCCGGCTAACCTGGTGGGAATACTCCTGGGACATTATGGAGCCGGTGACGTACTTCGTCACGTACGGTACGGCGATGGCCGCGTACGCTTACTTCGTGCTAACGAAGCATGAATATCTGCTGCCGGACGTGAAAGACCGCCAGCATCTGATCACGCTGCACAAGGCGGCCAAGAAGGCGGGCGTCAATCTGGCCGAGTACAACGA]
[+] EMBL AGA280418 [CGAGAACCTGATGGACGACGAGTTTTGGTTGCATCTGAACGACCGACAATACTACGTTAAGCCACCGAAGCGTGAAAAAATTACCTCAGAAGAAATCACTAGACTAGGCGACGTACAGGCACTGGTGGCACAGCTGTACGAGGCACTGCACGTGGGCGAACATCAGGTGCAGAAGGAGCGCGAACTGAACGGCAAGCTGGAGCAGTTGAACGAGAAGCTCGGCCCATTGGAAGCGAAAAAGAATGAACTCGACCAGAAAGCGGCCCGCAAGACGAATGCCCTGACCTGGGTCGGGCTGGGCCTGATGTCGGTACAGTTCGGTGTGCTCGCCCGGCTAACCTGGTGGGAATACTCCTGGGACATTATGGAGCCGGTGACGTACTTCGTCACGTACGGTACGGCGATGGCCGCGTACGCTTACTTCGTGCTAACGAAGCATGAATATCTGCTGCCGGACGTGAAAGACCGCCAGCATCTGATCACGCTGCACAAGGCGGCCAAGAAGGCGGGCGTCAATCTGGCCGAGTACAACGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_609#0 GCCGCCTGCTCCATCGAGAACCTGATGGACGACGAGTTTTGGTTGCATCTGAACGACCGA 60
consensus_609#1 --------------CGAGAACCTGATGGACGACGAGTTTTGGTTGCATCTGAACGACCGA 46
**********************************************
consensus_609#0 CAATACTACGTTAAGCCACCGAAGCGTGAAAAAATTACCTCAGAAGAAATCACTAGACTA 120
consensus_609#1 CAATACTACGTTAAGCCACCGAAGCGTGAAAAAATTACCTCAGAAGAAATCACTAGACTA 106
************************************************************
consensus_609#0 GGCGACGTACAGGCACTGGTGGCACAGCTGTACGAGGCACTGCACGTGGGCGAACATCAG 180
consensus_609#1 GGCGACGTACAGGCACTGGTGGCACAGCTGTACGAGGCACTGCACGTGGGCGAACATCAG 166
************************************************************
consensus_609#0 GTGCAGAAGGAGCGCGAACTGAACGGCAAGCTGGAGCAGTTGAACGAGAAGCTCGGCCCA 240
consensus_609#1 GTGCAGAAGGAGCGCGAACTGAACGGCAAGCTGGAGCAGTTGAACGAGAAGCTCGGCCCA 226
************************************************************
consensus_609#0 TTGGAAGCGAAAAAGAATGAACTCGACCAGAAAGCGGCCCGCAAGACGAATGCCCTGACC 300
consensus_609#1 TTGGAAGCGAAAAAGAATGAACTCGACCAGAAAGCGGCCCGCAAGACGAATGCCCTGACC 286
************************************************************
consensus_609#0 TGGGTCGGGCTGGGCCTGATGTCGGTACAGTTCGGTGTGCTCGCCCGGCTAACCTGGTGG 360
consensus_609#1 TGGGTCGGGCTGGGCCTGATGTCGGTACAGTTCGGTGTGCTCGCCCGGCTAACCTGGTGG 346
************************************************************
consensus_609#0 GAATACTCCTGGGACATTATGGAGCCGGTGACGTACTTCGTCACGTACGGTACGGCGATG 420
consensus_609#1 GAATACTCCTGGGACATTATGGAGCCGGTGACGTACTTCGTCACGTACGGTACGGCGATG 406
************************************************************
consensus_609#0 GCCGCGTACGCTTACTTCGTGCTAACGAAGCAGGTGAGTGGTTTTGAGTGGTTTAATCCC 480
consensus_609#1 GCCGCGTACGCTTACTTCGTGCTAACGAAGCATG-------------------------- 440
******************************** *
consensus_609#0 ACACACACACAAACCCATTTGACGTCTCACATCTGCGTTTACCTTGTAGGAATATCTGCT 540
consensus_609#1 --------------------------------------------------AATATCTGCT 450
**********
consensus_609#0 GCCGGACGTGAAAGACCGCCAGCATCTGATCACGCTGCACAAGGCGGCCAAGAAGGCGGG 600
consensus_609#1 GCCGGACGTGAAAGACCGCCAGCATCTGATCACGCTGCACAAGGCGGCCAAGAAGGCGGG 510
************************************************************
consensus_609#0 CGTCAATCTGGCCGAGTACAACGACATCAAGCGGCAGATCGCGGAGATCGAGCACGATCT 660
consensus_609#1 CGTCAATCTGGCCGAGTACAACGA------------------------------------ 534
************************
consensus_609#0 GCGCCGGCTGCGCGACCCACTGTACATGCATCTACCGGCGCCGCCGCCAAAGACGAAAAC 720
consensus_609#1 ------------------------------------------------------------
consensus_609#0 GTTCAGCGCAAGCGAGATTGCGTT 744
consensus_609#1 ------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||