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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6109#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 637 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCGCGGCGTGCAGTGTTTCGTTTTTATTTCAGCCGGCCGGTACATTAATTAGTGTGGTTTTGCTACAGTTTTACTTCGTCTATTGCTTCGCACACTGGTCACGATGGCACCGCAAGATGACAATCAAACACAGGAAAAACCTGTCCTCAAGGGTGCGATTACCATTTCGCAAATAAACGCGGACGAAATAACCTTCCTTGCCAATCGGTTCTGGGCGCCAGATACAGCAAACGCTCACGAAGCATTTAATTCGCAAATCATCGAAGACATCTACCGGAAGGAAATATGCGATTCGCGTCATTCACTGCGCCGGATCATGATGCTGGAGTTCAGCCAGTATCTGGAGAACTACCTGTGGCCCAACTTTGACGGTGAACGTGCGACTCGTGCTCATCTGATGTCGATAGTGGCGATGGTGAATGAAAAGTTTCGCGAAAAGGTGGAAGTGTGGAAAGTGTTCGAAAAGAGCAGTGAGCTGTTTGCGAAATTCTTCCAGCGCGTGCTGGAGGCGTGCATCGAAGACCGCCCCGTAACGCCGGCGGTTATGCGTGAGCAGACGGCATTGCTTGTCTTTTTGAACCATTGCTTCAACAGCATGGAGGTGGAAATCT]
[+] EMBL BM600503 [CCGCCCACGCGTCCGCCCACGCGTCCGCGCGGCGTGCAGTGTTTCGTTTTTATTTCAGCCGGCCGGTACATTAATTAGTGTGGTTTTGCTACAGTTTTACTTCGTCTATTGCTTCGCACACTGGTCACGATGGCACCGCAAGATGACAATCAAACACAGGAAAAACCTGTCCTCAAGGGTGCGATTACCATTTCGCAAATAAACGCGGACGAAATAACCTTCCTTGCCAATCGGTTCTGGGCGCCAGATACAGCAAACGCTCACGAAGCATTTAATTCGCAAATCATCGAAGACATCTACCGGAAGGAAATATGCGATTCGCGTCATTCACTGCGCCGGATCATGATGCTGGAGTTCAGCCAGTATCTGGAGAACTACCTGTGGCCCAACTTTGACGGTGAACGTGCGACTCGTGCTCATCTGATGTCGATAGTGGCGATGGTGAATGAAAAGTTTCGCGAAAAGGTGGAAGTGTGGAAAGTGTTCGAAAAGAGCAGTGAGCTGTTTGCGAAATTCTTCCAGCGCGTGCTGGAGGCGTGCATCGAAGACCGCCCCGTAACGCCGGCGGTTATGCGTGAGCAGACGGCATTGCTTGTCTTTTTGAACCATTGCTTCAACAGCATGGAGGTGGAAATCT]
[+] EMBL AGA284881 [ ACAGTTTTACTTCGTCTATTGCTTCGCACACTGGTCACGATGGCACCGCAAGATGACAATCAAACACAGGAAACACCTGTCCTCAAGGGTGCGATTACCATTTCGCAAATAAACGCGGACGAAATAACCTTCCTTGCCAATCGGTTCTGGGCGCCAGATACAGCAAACGCTCACGAAGCATTTAATTC ]
[+] EMBL AGA285526 [ ACAATCAAACACAGGAAAAACCTGTCCTCAAGGGTGCGATTACCATTTCGCAAATAAACGCGGACGAAATAACCTTCCTTGCCAATCGGTTCTGGGCGCCAGATACAGCAAACGCTCACGAAGCATTTAATTCGCAAATCATCGAAGACATCTACCGGAAGGAAATATGCGATTCGCGTCATTCACTGCGCCGGATCATGATGCTGGAGTTCAGCCAGTATCTGGAGAACTACCTGTGGCCCAACTTTGACGGTGAACGTGCGACTCGTGCTCATCTGATGTCGATAGTGGCGATGGTGAATGAAAAGTTTCGCGAAAAGGTGGAAGTGTGGAAAGTGTTCGAAAAGAGCAGTGAGCTGTTTGCGAAATTCTTCCAGCGCGTGCTGGAGGCGTGCATCCAAGAACGC ]
consensusID : consensus_6109#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 366 fasta sequence
[CTCAAACTGTGTTTACACTTGCCAATCGGTTCTGGGCGCCAGATACAGCAAACGCTCACGAAGCATTTAATTCGCAAATCATCGAAGACATCTACCGGAAGGAAATATGCGATTCGCGTCATTCACTGCGCCGGATCATGATGCTGGAGTTCAGCCAGTATCTGGAGAACTACCTGTGGCCCAACTTTGACGGTGAACGTGCGACTCGTGCTCATCTGATGTCGATAGTGGCGATGGTGAATGAAAAGTTTCGCGAAAAGGTGGAAGTGTGGAAAGTGTTCGAAAAGAGCAGTGAGCTGTTTGCGAAATTCTTCCAGCGCGTGCTGGAGGCGTGCATCGAAGACCGCCCCGTAACGCCGGCGGTTA]
[+] EMBL AGA282622 [CTCAAACTGTGTTTACACTTGCCAATCGGTTCTGGGCGCCAGATACAGCAAACGCTCACGAAGCATTTAATTCGCAAATCATCGAAGACATCTACCGGAAGGAAATATGCGATTCGCGTCATTCACTGCGCCGGATCATGATGCTGGAGTTCAGCCAGTATCTGGAGAACTACCTGTGGCCCAACTTTGACGGTGAACGTGCGACTCGTGCTCATCTGATGTCGATAGTGGCGATGGTGAATGAAAAGTTTCGCGAAAAGGTGGAAGTGTGGAAAGTGTTCGAAAAGAGCAGTGAGCTGTTTGCGAAATTCTTCCAGCGCGTGCTGGAGGCGTGCATCGAAGACCGCCCCGTAACGCCGGCGGTTA]
[+] EMBL AGA281802 [ GCGCCAGATACAGCAAACGCTCACGAAGCATTTAATTCGCAAATCATCGAAGACATCTACCGGAAGGAAATATGCGATTCGCGTCATTCACTGCGCCGGATCATGATGCTGGAGTTCAGCCAGTATCTGGAGAACTACCTGTGGCCCAACTTTGACGGTGAACGTGCGACTCGTGCTCATCTGATGTCGATAGTGGCGATGGTGAATGAAAAGTTTCGCGAAAAGGTGGAAGTGTGGAAAGTGTTCGAAAAGAGCAGTGAGCTGTTTGCGAAATTCTTCCAACG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6109#0 CCGCCCACGCGTCCGCCCACGCGTCCGCGCGGCGTGCAGTGTTTCGTTTTTATTTCAGCC 60
consensus_6109#1 ------------------------------------------------------------
consensus_6109#0 GGCCGGTACATTAATTAGTGTGGTTTTGCTACAGTTTTACTTCGTCTATTGCTTCGCACA 120
consensus_6109#1 ------------------------------------------------------------
consensus_6109#0 CTGGTCACGATGGCACCGCAAGATGACAATCAAACACAGGAAAAACCTGTCCTCAAGGGT 180
consensus_6109#1 ------------------------------------------------------------
consensus_6109#0 GCGATTACCATTTCGCAAATAAACGCGGACGAAATAACCTTCCTTGCCAATCGGTTCTGG 240
consensus_6109#1 -----------------------CTCAAACT--GTGTTTACACTTGCCAATCGGTTCTGG 35
* * ** * ******************
consensus_6109#0 GCGCCAGATACAGCAAACGCTCACGAAGCATTTAATTCGCAAATCATCGAAGACATCTAC 300
consensus_6109#1 GCGCCAGATACAGCAAACGCTCACGAAGCATTTAATTCGCAAATCATCGAAGACATCTAC 95
************************************************************
consensus_6109#0 CGGAAGGAAATATGCGATTCGCGTCATTCACTGCGCCGGATCATGATGCTGGAGTTCAGC 360
consensus_6109#1 CGGAAGGAAATATGCGATTCGCGTCATTCACTGCGCCGGATCATGATGCTGGAGTTCAGC 155
************************************************************
consensus_6109#0 CAGTATCTGGAGAACTACCTGTGGCCCAACTTTGACGGTGAACGTGCGACTCGTGCTCAT 420
consensus_6109#1 CAGTATCTGGAGAACTACCTGTGGCCCAACTTTGACGGTGAACGTGCGACTCGTGCTCAT 215
************************************************************
consensus_6109#0 CTGATGTCGATAGTGGCGATGGTGAATGAAAAGTTTCGCGAAAAGGTGGAAGTGTGGAAA 480
consensus_6109#1 CTGATGTCGATAGTGGCGATGGTGAATGAAAAGTTTCGCGAAAAGGTGGAAGTGTGGAAA 275
************************************************************
consensus_6109#0 GTGTTCGAAAAGAGCAGTGAGCTGTTTGCGAAATTCTTCCAGCGCGTGCTGGAGGCGTGC 540
consensus_6109#1 GTGTTCGAAAAGAGCAGTGAGCTGTTTGCGAAATTCTTCCAGCGCGTGCTGGAGGCGTGC 335
************************************************************
consensus_6109#0 ATCGAAGACCGCCCCGTAACGCCGGCGGTTATGCGTGAGCAGACGGCATTGCTTGTCTTT 600
consensus_6109#1 ATCGAAGACCGCCCCGTAACGCCGGCGGTTA----------------------------- 366
*******************************
consensus_6109#0 TTGAACCATTGCTTCAACAGCATGGAGGTGGAAATCT 637
consensus_6109#1 -------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||