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Anopheles gambiae
cluster # 6146 cluster # 6146       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6146#0 length = 1187 sequences # 4  
consensus_6146#1 length = 747 sequences # 1  

consensusID : consensus_6146#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1187
fasta sequence
                              [ATTAAAATTAGTATCCGCTCTACCAAACCTCGTGAAATTCATTTCATTCAAATTGAAACGAATGTTCCCGTTCCCCTAGAAACTCCATTTTGCACTGCGCGTCAACATCAACATTTTGATCTAGGCGGCTAGGACGGCTAGGACCTGAGCGGTAAATGAGAGGAGATTAGGTGGTGCGCCAAACACTGATTTTGGTGGGCTTAGGCATAGGAATTCAAAAAAAGGAACGTTTCTAGACAATCGATTAAATTCGGCGCACAAGCACAAGCGCAAAGGGTTTGATCTGGCCCAGGCCCTGCGTTGTAAGGGCGTAAGGGAACTGCTGACAACATTTATCCCAGCACTGGCACTGCATCTGGAACCGGTCTTTTCACTGATCCCGAACCTTAACCGTTCCTGGTAGCTACTCCCTAATATTTGAAATGGATCTGATACCGAAATCACATTTATCTTGGATCGCAACCCCTAGCGGATACCAATCCGGAATCAGACTAGCATTAAAACATGTGCATCTTGGTATATTTTAGTCAAAATCAAATCTTTCTTGAACACCACTAAAAACAATATTTGTTCTCCCTAATAACTGCAATGTTCTCCTTATTAGGAAGTTAGCCCTCTGATCTCCTTCTCCTGCGTACCTCCTTTTCATTCTCTTTCCCGCGAATTTATATAACCATATCCATAGCGGTCTAGGGACGGATTCTGAATCTATCTCAATCTAGATATCTTTTGCCAAACCTGGCCCGGAATAGATCACGGACCTATCCCGATCCAGCAACCGGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGAGATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTATACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCGAACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAAATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCATGATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAATAGCGCACTTATTATGGAAAAAAAACATGTAAACATTACACGTAACT]

[+] EMBL BX626710             [ATTAAAATTAGTATCCGCTCTACCAAACCTCGTGAAATTCATTTCATTCAAATTGAAACGAATGTTCCCGTTCCCCTAGAAACTCCATTTTGCACTGCGCGTCAACATCAACATTTTGATCTAGGCGGCTAGGACGGCTAGGACCTGAGCGGTAAATGAGAGGAGATTAGGTGGTGCGCCAAACACTGATTTTGGTGGGCTTAGGCATAGGAATTCAAAAAAAGGAACGTTTCTAGACAATCGATTAAATTCGGCGCACAAGCACAAGCGCAAAGGGTTTGATCTGGCCCAGGCCCTGCGTTGTAAGGGCGTAAGGGAACTGCTGACAACATTTATCCCAGCACTGGCACTGCATCTGGAACCGGTCTTTTCACTGATCCCGAACCTTAACCGTTCCTGGTAGCTACTCCCTAATATTTGAAATGGATCTGATACCGAAATCACATTTATCTTGGATCGCAACCCCTAGCGGATACCAATCCGGAATCAGACTAGCATTAAAATATGTGCATCTTGGTATATTTTAGTCAAAATCAAATCTTTCTTGAACACCACTAAAAACAATATTTGTTCTCCTTAATAACTGCAATGGTCTCCTTATTANGAAGTTAGNCCTCTGATCTCCTTCTCCTGCGTACCTCCTTTTCATTCTCTTTCCCGCGAATTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX621426             [                                                                                                                                                                                                                                                                      tACAAGCGCAAAGGGTTTGATCTGGCCCAGGCCCTGCGTTGTAAGGGCGTAAGGGAACTGCTGACAACATTTATCCCAGCACTGGCACTGCATCTGGAACCGGTCTTTTCACTGATCCCGAACCTTAACCGTTCCTGGTAGCTAATCCCTAATATTTGAAATGGATCTGATACCGAAATCACATTTATCTTGGATCGCAACCCCTAGCGGATACCAATCCGGAATCAGACTAGCATTAAAACATGTGCATCTTGGTATATTTTAGTCAAAATCAAATCTTTCTTGAACACCACTAAAAACAATATTTGTTCTCCCTAATAACTGCAATGTTCTCCTTATTAGGAAGTTAGCCCTCTGATCTCCTTCTCCTGCGTACCTCCTTTTCATTCTCTTTCCCGCGAATTTATATAACCATATCCATAGCGGTCTAGGGACGGATTCTGAATCTATCTCAATCTAGATATCTTTTGCCAAACCTGGCCCGGAATAGATCACGGACCTATCCCGATCCAGCAACCGGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGAGATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTATACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCGAACGATGTAAACCAAACGCGAAACGAATT                                                                                                                                                                                                      ]
[+] EMBL BX614906             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGCGGATACCAATCCGGAATCAGACTAGCATTAAAACATGTGCATCTTGGTATATTTTAGTCAAAATCAAATCTTTCTTGAACACCATTAAAAACAATATTTGTTCTCCCTAATAACTGCAATGTTCTCCTTATTAGGAAGTTAGCCCTCTGATCTCCTTCTCCTGCGTACCTCCTTTTCATTCTCTTTCCCGCGAATTTATATAACCATATCCATAGCGGTCTAGGGACGGATTCTGAATCTATCTCAATCTAGATATCTTTTGCCAAACCTGGCCCGGAATAGATCACGGACCTATCCCGATCCAGCAACCGGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGAGATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTATACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCGAACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAAATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCATGATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAATAGCGCA                                        ]
[+] EMBL BM629871             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgATTAAAACATGTGCATCTTGGTATATTTTAGTCAAAATCAAATCTTTCTTGAACACCACTAAAAACAATATTTGTTCTCCCTAATAACTGCAATGTTCTCCTTATTAGGAAGTTAGCCCTCTGATCTCCTTCTCCTGCGTACCTCCTTTTCATTCTCTTTCCCGCGAATTTATATAACCATATCCATAGCGGTCTAGGGACGGATTCTGAATCTATCTCAATCTAGATATCTTTTGCCAAACCTGGCCCGGAATAGATCACGGACCTATCCCGATCCAGCAACCGGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGAGATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTATACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCGAACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAAATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCATGATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAATAGCGCACTTATTATGGAAAAAAAACATGTAAACATTACACGTAACT]


>consensus_6146#0 ATTAAAATTAGTATCCGCTCTACCAAACCTCGTGAAATTCATTTCATTCAAATTGAAACG AATGTTCCCGTTCCCCTAGAAACTCCATTTTGCACTGCGCGTCAACATCAACATTTTGAT CTAGGCGGCTAGGACGGCTAGGACCTGAGCGGTAAATGAGAGGAGATTAGGTGGTGCGCC AAACACTGATTTTGGTGGGCTTAGGCATAGGAATTCAAAAAAAGGAACGTTTCTAGACAA TCGATTAAATTCGGCGCACAAGCACAAGCGCAAAGGGTTTGATCTGGCCCAGGCCCTGCG TTGTAAGGGCGTAAGGGAACTGCTGACAACATTTATCCCAGCACTGGCACTGCATCTGGA ACCGGTCTTTTCACTGATCCCGAACCTTAACCGTTCCTGGTAGCTACTCCCTAATATTTG AAATGGATCTGATACCGAAATCACATTTATCTTGGATCGCAACCCCTAGCGGATACCAAT CCGGAATCAGACTAGCATTAAAACATGTGCATCTTGGTATATTTTAGTCAAAATCAAATC TTTCTTGAACACCACTAAAAACAATATTTGTTCTCCCTAATAACTGCAATGTTCTCCTTA TTAGGAAGTTAGCCCTCTGATCTCCTTCTCCTGCGTACCTCCTTTTCATTCTCTTTCCCG CGAATTTATATAACCATATCCATAGCGGTCTAGGGACGGATTCTGAATCTATCTCAATCT AGATATCTTTTGCCAAACCTGGCCCGGAATAGATCACGGACCTATCCCGATCCAGCAACC GGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGA GATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTAT ACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCG AACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAA ATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCAT GATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAA TAGCGCACTTATTATGGAAAAAAAACATGTAAACATTACACGTAACT



consensusID : consensus_6146#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 747
fasta sequence
                              [GAGGCAGAATCGGCACGAGGCCCGATCCAGCAACCGGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGAGATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTATACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCGAACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAAATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCATGATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAATAGCGCACTTATTATGGAAAAAAAACATGTAAACATTACACGTAACTAGGAGCAAAGATCGAAAAGTAAAACCGAAAGCTAATGTATTGTGATAAAGAAAGTAATGTTGTTTGGCCATACATTTACTCCATGCAAAAGGAAAATGTACAAACAGATTTATTTGAGAATGATGGCTAAAAACTAAAGTCCAAGGGCAAGGCGAACGAAACTGCAAGAAGGTAAAACGTAATGATGCAGAGCAAACAGATGGAAACAGTGGGGAATAGAAGAAAGCGATAAGAACTACTCAGGAATATTNTATTGATTGGTACCCTTTAAGAGGNGNNGGAGGCNAGGAGAGAGAGGNGGCANA]

[+] EMBL BX467594             [GAGGCAGAATCGGCACGAGGCCCGATCCAGCAACCGGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGAGATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTATACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCGAACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAAATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCATGATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAATAGCGCACTTATTATGGAAAAAAAACATGTAAACATTACACGTAACTAGGAGCAAAGATCGAAAAGTAAAACCGAAAGCTAATGTATTGTGATAAAGAAAGTAATGTTGTTTGGCCATACATTTACTCCATGCAAAAGGAAAATGTACAAACAGATTTATTTGAGAATGATGGCTAAAAACTAAAGTCCAAGGGCAAGGCGAACGAAACTGCAAGAAGGTAAAACGTAATGATGCAGAGCAAACAGATGGAAACAGTGGGGAATAGAAGAAAGCGATAAGAACTACTCAGGAATATTNTATTGATTGGTACCCTTTAAGAGGNGNNGGAGGCNAGGAGAGAGAGGNGGCANA]


>consensus_6146#1 GAGGCAGAATCGGCACGAGGCCCGATCCAGCAACCGGTCCCATAACCATGGTTGGTCTAT GAAAAGATACTATCCCTTTAAATAATTGGTCTGGAGATGATGAGTATTGAAATGTGTTTG GCAATTCATTGCGTCTTATTTGAAAAATGATTTATACTTTTCTTATTGACCCTACATGAA TGCTCAAGGACCTAAGATACGCAGAACAAATATCGAACGATGTAAACCAAACGCGAAACG AATTGCAAATTTACAATGAGAAGATACACAAATAAATAAATAAATAAATAAACAAAAATT ATGAATAAAACTGACAGGCTGATGATAATGATCATGATGGTGCAGATATGGCGTTGATGC AGGTGAAGATGAAAGAGACATGTAAAACCAAGCAATAGCGCACTTATTATGGAAAAAAAA CATGTAAACATTACACGTAACTAGGAGCAAAGATCGAAAAGTAAAACCGAAAGCTAATGT ATTGTGATAAAGAAAGTAATGTTGTTTGGCCATACATTTACTCCATGCAAAAGGAAAATG TACAAACAGATTTATTTGAGAATGATGGCTAAAAACTAAAGTCCAAGGGCAAGGCGAACG AAACTGCAAGAAGGTAAAACGTAATGATGCAGAGCAAACAGATGGAAACAGTGGGGAATA GAAGAAAGCGATAAGAACTACTCAGGAATATTNTATTGATTGGTACCCTTTAAGAGGNGN NGGAGGCNAGGAGAGAGAGGNGGCANA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6146#0      ATTAAAATTAGTATCCGCTCTACCAAACCTCGTGAAATTCATTTCATTCAAATTGAAACG 60
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      AATGTTCCCGTTCCCCTAGAAACTCCATTTTGCACTGCGCGTCAACATCAACATTTTGAT 120
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      CTAGGCGGCTAGGACGGCTAGGACCTGAGCGGTAAATGAGAGGAGATTAGGTGGTGCGCC 180
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      AAACACTGATTTTGGTGGGCTTAGGCATAGGAATTCAAAAAAAGGAACGTTTCTAGACAA 240
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TCGATTAAATTCGGCGCACAAGCACAAGCGCAAAGGGTTTGATCTGGCCCAGGCCCTGCG 300
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TTGTAAGGGCGTAAGGGAACTGCTGACAACATTTATCCCAGCACTGGCACTGCATCTGGA 360
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      ACCGGTCTTTTCACTGATCCCGAACCTTAACCGTTCCTGGTAGCTACTCCCTAATATTTG 420
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      AAATGGATCTGATACCGAAATCACATTTATCTTGGATCGCAACCCCTAGCGGATACCAAT 480
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      CCGGAATCAGACTAGCATTAAAACATGTGCATCTTGGTATATTTTAGTCAAAATCAAATC 540
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TTTCTTGAACACCACTAAAAACAATATTTGTTCTCCCTAATAACTGCAATGTTCTCCTTA 600
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TTAGGAAGTTAGCCCTCTGATCTCCTTCTCCTGCGTACCTCCTTTTCATTCTCTTTCCCG 660
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      CGAATTTATATAACCATATCCATAGCGGTCTAGGGACGGATTCTGAATCTATCTCAATCT 720
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      AGATATCTTTTGCCAAACCTGGCCCGGAATAGATCACGGACCTATCCCGATCCAGCAACC 780
consensus_6146#1      -------------------------GAGGCAGAATCGGCACGAGGCCCGATCCAGCAACC 35
                                               *    ***    * **    ***************

consensus_6146#0      GGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGA 840
consensus_6146#1      GGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGA 95
                      ************************************************************

consensus_6146#0      GATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTAT 900
consensus_6146#1      GATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTAT 155
                      ************************************************************

consensus_6146#0      ACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCG 960
consensus_6146#1      ACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCG 215
                      ************************************************************

consensus_6146#0      AACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAA 1020
consensus_6146#1      AACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAA 275
                      ************************************************************

consensus_6146#0      ATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCAT 1080
consensus_6146#1      ATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCAT 335
                      ************************************************************

consensus_6146#0      GATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAA 1140
consensus_6146#1      GATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAA 395
                      ************************************************************

consensus_6146#0      TAGCGCACTTATTATGGAAAAAAAACATGTAAACATTACACGTAACT------------- 1187
consensus_6146#1      TAGCGCACTTATTATGGAAAAAAAACATGTAAACATTACACGTAACTAGGAGCAAAGATC 455
                      ***********************************************             

consensus_6146#0      ------------------------------------------------------------
consensus_6146#1      GAAAAGTAAAACCGAAAGCTAATGTATTGTGATAAAGAAAGTAATGTTGTTTGGCCATAC 515
                                                                                  

consensus_6146#0      ------------------------------------------------------------
consensus_6146#1      ATTTACTCCATGCAAAAGGAAAATGTACAAACAGATTTATTTGAGAATGATGGCTAAAAA 575
                                                                                  

consensus_6146#0      ------------------------------------------------------------
consensus_6146#1      CTAAAGTCCAAGGGCAAGGCGAACGAAACTGCAAGAAGGTAAAACGTAATGATGCAGAGC 635
                                                                                  

consensus_6146#0      ------------------------------------------------------------
consensus_6146#1      AAACAGATGGAAACAGTGGGGAATAGAAGAAAGCGATAAGAACTACTCAGGAATATTNTA 695
                                                                                  

consensus_6146#0      ----------------------------------------------------
consensus_6146#1      TTGATTGGTACCCTTTAAGAGGNGNNGGAGGCNAGGAGAGAGAGGNGGCANA 747
                                                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)