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Anopheles gambiae
cluster # 6172 cluster # 6172       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6172#0 length = 1301 sequences # 5  

consensusID : consensus_6172#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1301
fasta sequence
                              [AAAAGCACAGCTGTTTCGGGGAGGGAAAAACTCCGCACTCTGCGACAAACCAATTTGTCGGATGGAATGAAGAAAGGCGTACAAAGTGATCCGAACATAATAAGCAATCGAAAATAGCGAACCAGGCAGCCAGGTA------TGTGTGTGTGTGTTTGTAGCTCCTTCATGTATTAAGGAGGGCAGGTAGCAAGGAAACAGGAACGTCATCGCAGATCTCATGCAGTGATGTAGAAGTACGTGTTGTAGTAGGGGTCGACTATTGTTTGCTTTTATGTTGATTTTTTTTTTCGTGTGGACAGCTTTGGGGACTTCAAAGCTGTATGTTAGTGAGTATGCAATAACATAACAAGAATGTGTGTGTACTTGTGGTTTTAGTGAAAGAGAATAGATCTTTCGCAATAGACAGCCCCGTAATGTTGTTGTAAGGTTTGTCTGCATGTGTAAATGTTGGCTTGTCTGCAGAATTGAATAGA-TTTTTTTCTTTTTTTTTAACAAAGGTTTGTGTTTCACACCGTTGCGTGTTCACTGTTTGGGAAAAGAGACGGATATTCGTAGTGTTGGCCAGAGGGAAAATGGCGCTCTAGATGGTGCGGAAAGCGTAGCCTCCGGTTTGTTTAGTGTCGGTGG--TTTTTTTTTTGTTCTGTTAAGTTTTGTGATGCTCTCAAGGAGAGCGCAACCGAAGGCAACATGCTTCAATAATAGTGTTTAAGAGGGAAGTTATTTGAGGTAAAGCAGCGCTGTGTTTTTTAAAACCACATGCAAATCAATAGCAAATGGAAAATTTAATCAAAATCAGAAGAAAATCGTCCTTGAAACCAGCTCAATCAGTCAATCGCTGTCCGCTCTGTCGGTTGCAAAGGCACAAATAGGAAGCAGTTACCGTTGTTCACACAACAGACGGAGCGGACAGAGAGGATATACAAGCAAAATAAGGCCGGGAAGGTATAGTGATGCTGGTTAAAGGAGAAAAAAGAAGAAGAAGAAAAGAAACAATGTTTTGTAGTGATAAACCAAATTTTAATGAAACTGTAACAGGCTTCAGTTGTCGTTTTGTTTGACCGTGCTTTCGTTTCCAGCGTAGGAGGACCGGAATGGGATAGACGTAGATATTATTATGGATGGCAGTGTTTCGTGATTAATGGCAAATAGAACAGGGGAGGGGGCATGGTAATAAATAGCAAAAAAATAGGGAACTAAACTACCAGACAAGTGGACAAAGTGTGTGTGTGTGCGTGTATGTGTGCTGTATACAACAGTGTAACATTGCCGAGGTTCGCAGCAAGCAAGCAAATGTAAGATTCGAT]

[+] EMBL BX625718             [AAAAGCACAGCTGTTTCGGGGAGGGAAAAACTCCGCACTCTGCGACAAACCAATTTGTCGGATGGAATGAAGAAAGGCGTACAAAGTGATCCGAACATAATAAGCAATCGAAAATAGCGAACCAGGCAGCCAGGTA      TGTGTGTGTGTGTTTGTAGCTCCTTCATGTATTAAGGAGGGCAGGTAGCAAGGAAACAGGAACGTCATCGCAGATCTCATGCAGTGATGTAGAAGTACGTGTTGTAGTAGGGGTCGACTATTGTTTGCTTTTATGTTGATTTTTTTTTTCGTGTGGACAGCTTTGGGGACTTCAAAGCTGTATGTTAGTGAGTATGCAATAACATAACAAGAATGTGTGTGTACTTGTGGTTTTAGTGAAAGAGAATAGATCTTTCGCAATAGACAGCCCCGTAATGTTGTTGTAAGGTTTGTCTGCATGTGTAAATGTTGGCTTGTCTGCAGAATTGAATAGA TTTTTTTCTTTTTTTTTAACAAAGGTTTGTGTTTCACACCGTTGCGTGTTCACTGTTTGGGAAAAGAGACGGATATTCGTAGTGTTGGCCAGAGGGAAAATGGCGCTCTAGATGGTGCGGAAAGCGTAGCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX617118             [                                                                       GAAAGGCGTACAAAGTGATCCGAACATATTAAGCAATCGAAAGTAGC AACCAGGCAGCCAGGTATGTGTGTGTGTGTGTGTGTTTGTAGCTCCTTCATGTATTAAGGAGGGCAGGTAGCAAGGAAACAGGAACGTCATCGCAGATCTCATGCAGTGATGTAGTAGTGCGTGTTGTAGTAGGGGTCGACTATTGTTTGCTTTTATGTTGATTTTTTTCTTCGTGTGGACAGCTTTGAGGACTTCAAAGCTGTATGTTAGTGAGTATGCAATAACATAACAAGAATGTGTGTGTACTTGTGGTTTTAGTGAAAGAGAATAGATCTTTCGCAATAGACAGCCCCGTTATGTTGTTGTAAGGTTTGTCTGCATG      TGTTGGCTTGTCTGCAGAATTGATTAGATTTTTTTTCTTTTTTTTTAACAAAGGTTTGTGTTTCACACCGTTGCGTGTTCACTGTTTGGGAAAAGAGACGGATATTCGTAGTGTTGGCCAGAGGGAAAATTGCGCTCTAGATGGTGCGAAAAGCGTAGCCTCCGGTTTGTTTAGTGTCGGTGG  TTTTTTTTTTGTTCTGTTAAGTTTTGTGATGCTCTCAAGGAGAGCGCAACCGAAGGCAACATGCTTCAATAATAGTGTTTAAGAGGGAAGTTATTTGAGGTAAAGCAGCGCTGTGTTTTTTAAAACCACATGCAAATCAATAGCAAATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL BX622192             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGTGTTTCACACCGTTGCGTGTTCACTGTTTGGGAAAAGCGAGGGATATTCGTAGTGTTGGCCAGAGGGAAAATGGCGCTCTAGATGGTGCGGAAAGCGTAGCCTCCAGTTTGTTTAGTGTCGGTGGTTTTTTTTTTTTGTTCTGTTAAGTTTTGTGATGCTCTCAAGGAGAGCGCAACCGAAGGCAACATGCTTCAATAATAGTGTTTAAGAGGGAAGTTATTTGAGGTAAAGCAGCGCTGTGTTTTTTAAAACCACATGCAAATCAATAGCAAATGGAAAATTTAATCAAAATCAGAAGAAAATCGTCCTTGAAACCAGCTCAATCAGTCAATCGCTGTCCGCTCTGTCGGTTGCAAAGGCACAAATAGGAAGCAGTTACCGTTGTTCACACAACAGACGGAGCGGACAGAGAGGATATACAAGCAAAATAAGGCCGGGAAGGTATAGTGATGCTGGTTAAAGGAGA                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM651785             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgGGCACAAATAGGAAGCAGTTACCGTTGTTCACACAACAGACGGAGCGGACAGAGAGGATATACAAGCAAAATAAGGCCGGGAAGGTATAGTGATGCTGGTTAAAGGAGAAAAAAGAAGAAGAAGAAAAGAAACAATGTTTTGTAGTGATAAACCAAATTTTAATGAAACTGTAACAGGCTTCAGTTGTCGTTTTGTTTGACCGTGCTTTCGTTTCCAGCGTAGGAGGACCGGAATGGGATAGACGTAGATATTATTATGGATGGCAGTGTTTCGTGATTAATGGCAAATAGAACAGGGGAGGGGGCATGGTAATAAATAGCAAAAAAATAGGGAACTAAACTACCAGACAAGTGGACAAAGTGTGTGTGTGTGCGTGTATGTGTGCTGTATACAACAGTGTAACATTGCCGAGGTTCGCAGCAAGCAAGCAAATGTAAGATTCGAT]
[+] EMBL BM614768             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccgGTTGTTCACACAACAGACGGAGCGGACAGAGAGGATATACAAGCAAAATAAGGCCGGGAAGGTATAGTGATGCTGGTTAAAGGAGAAAAAAGAAG AG AGAAAA AAACAATGTTTTGTAGTGATAAACCAAATTTTAATGAAACTGTAACAGGCTTCAGTTCTCGTTTTGTTTGACCGTGCTTTCGTTTCCAGCGTAGGAGGACCGGAATGGGATAGACGTAGATATTATTATGGATGGCAGTGTTTCGTGATTAATGGCAAATAGAACAGGGGAGGGGGCATGGTAATAAATAGC AAAAAATAGGGAACTAAACTACCAGACAAGTGGGCAAAGTGTGTGTGTGTGCGTGTATGTGTGCTGTATACAACAGTGTAACATTGCCGAGGTTCGCAG                         ]


>consensus_6172#0 AAAAGCACAGCTGTTTCGGGGAGGGAAAAACTCCGCACTCTGCGACAAACCAATTTGTCG GATGGAATGAAGAAAGGCGTACAAAGTGATCCGAACATAATAAGCAATCGAAAATAGCGA ACCAGGCAGCCAGGTATGTGTGTGTGTGTTTGTAGCTCCTTCATGTATTAAGGAGGGCAG GTAGCAAGGAAACAGGAACGTCATCGCAGATCTCATGCAGTGATGTAGAAGTACGTGTTG TAGTAGGGGTCGACTATTGTTTGCTTTTATGTTGATTTTTTTTTTCGTGTGGACAGCTTT GGGGACTTCAAAGCTGTATGTTAGTGAGTATGCAATAACATAACAAGAATGTGTGTGTAC TTGTGGTTTTAGTGAAAGAGAATAGATCTTTCGCAATAGACAGCCCCGTAATGTTGTTGT AAGGTTTGTCTGCATGTGTAAATGTTGGCTTGTCTGCAGAATTGAATAGATTTTTTTCTT TTTTTTTAACAAAGGTTTGTGTTTCACACCGTTGCGTGTTCACTGTTTGGGAAAAGAGAC GGATATTCGTAGTGTTGGCCAGAGGGAAAATGGCGCTCTAGATGGTGCGGAAAGCGTAGC CTCCGGTTTGTTTAGTGTCGGTGGTTTTTTTTTTGTTCTGTTAAGTTTTGTGATGCTCTC AAGGAGAGCGCAACCGAAGGCAACATGCTTCAATAATAGTGTTTAAGAGGGAAGTTATTT GAGGTAAAGCAGCGCTGTGTTTTTTAAAACCACATGCAAATCAATAGCAAATGGAAAATT TAATCAAAATCAGAAGAAAATCGTCCTTGAAACCAGCTCAATCAGTCAATCGCTGTCCGC TCTGTCGGTTGCAAAGGCACAAATAGGAAGCAGTTACCGTTGTTCACACAACAGACGGAG CGGACAGAGAGGATATACAAGCAAAATAAGGCCGGGAAGGTATAGTGATGCTGGTTAAAG GAGAAAAAAGAAGAAGAAGAAAAGAAACAATGTTTTGTAGTGATAAACCAAATTTTAATG AAACTGTAACAGGCTTCAGTTGTCGTTTTGTTTGACCGTGCTTTCGTTTCCAGCGTAGGA GGACCGGAATGGGATAGACGTAGATATTATTATGGATGGCAGTGTTTCGTGATTAATGGC AAATAGAACAGGGGAGGGGGCATGGTAATAAATAGCAAAAAAATAGGGAACTAAACTACC AGACAAGTGGACAAAGTGTGTGTGTGTGCGTGTATGTGTGCTGTATACAACAGTGTAACA TTGCCGAGGTTCGCAGCAAGCAAGCAAATGTAAGATTCGAT



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)