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Anopheles gambiae
cluster # 6176 cluster # 6176       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6176#0 length = 1479 sequences # 5  

consensusID : consensus_6176#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1479
fasta sequence
                              [AACACAACAATAATCCGGCGTTTTGTTTCCCCCGCTGTATGTGCGTAAAACAGTTTTGATACCACGACGGGCAGAACCTGCACGGCTTCAAGATTGAGTCTCCTAGCATGGTCTCAACCCGTGGCCACAACACGAAGTACAAATTCTGCGATGGCGAAAAGGTGCTCTGCTACGAGCCGGATCCGACCAAAGCGAAGGTCCTGTACGACTCGAAGGTGCTGGAAGTTTCCGAGGGAAAGGACAAGCGGGGCCGACGCATCGTCGAGTATTTGATACACTTCCAGGGCTGGAACTCGTCCTGGGATCGGAAGGTTAGCGAGGATTTCATCCTGAAGGACACGGAAGAGAATCGCCAGCTGCAGAAGGATTTGGCGGAAAAATCACAGCTTTACCAAGGTGGTTATCTGTATCGAAAGGAGCGGAAGAAACAACGCGCCAAAAGTTTAACGGATCGAATCGAAAGCTTGACGAGTGCAAAGACGCAATCCATCAATCCCTCGTCGGAGGACGGAAGCTCGTGCAGTAACGGTTTCAGCAGGGACGAACATGAATACCATATTGATGACATGGATGAATACTACAGCAGCTCGGTCGAGAGCTCGCACGAGGAGGAAAAGGTGTACCTGCAAGCGGGCAGCAAGTTCCGCAAGCATCTCGACCTCGACCAGCATCTGATCGTGTCCGGCACGATGCTGGTGGAGCTGCCGGCCAAGCAGCCGGTGGTGACGATACTGGAAGATTTCGTGCGCTACTACACCATCCGCCAGCTGTTTGAGTGCGGCCATCAGGAGCAAACAAAGTCCCGCCGACGCAACAGCTCAGCCGTACGCACCGAGCACAAGGTACGCGACTACGAGCAGATTCGTACGAACGTCGAGCTGTGCAAGGAGGTGGCGG-ATGGGCTGCGCGT-TTACTTCGACTTTACGCTGCAGGACTATCTGCTGTATCCGCAGGAAAAACCACAGGCTCAGATCGTCCTGGCCGAGGACAATCTGCGTAGCTTCACGTACATTGCATCGCGCAACCTGTCCGTGGACATGCTGGCCGTTAAGCTCAACTCGCCCACGGCGGACGTGCATCAGCCGCTGAGCGAACATTCCGACCAGCAGTCGTCATCGGCAACCTCGGCGGAGGAACGTCGCCGGCGTCGATTGCGCTCGCACAAGAACGAGGAGAACGAGTTTGTGCTGGACTTTGGAGCGCTGCATCAAAGTACGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGGGACGATAAGCTGAAGCTGTTGCTCAAGTTTTTGGACATATTTGCCGAGTTTATCGAGGAGCACGAGGAATGGTTTGGCAAGCAGTTTTACTTCAGCCTAAAGGACAACGACATTTGAACCGATGGCGCCCGTCGATTAGTGGACGGGTATGGTTGGGCTCTTGCACGTGGATGGGTATTTTTCGAAACGAAAAAAATTTTCACGCAAGTGTTTGGAATAAATGTGACC]

[+] EMBL CNS098JE             [AACACAACAATAATCCGGCGTTTTGTTTCCCCCGCTGTATGTGCGTAAAACAGTTTTGATACCACGACGGGCAGAACCTGCACGGCTTCAAGATTGAGTCTCCTAGCATGGTCTCAACCCGTGGCCACAACACGAAGTACAAATTCTGCGATGGCGAAAAGGTGCTCTGCTACGAGCCGGATCCGACCAAAGCGAAGGTCCTGTACGACTCGAAGGTGCTGGAAGTTTCCGAGGGAAAGGACAAGCGGGGCCGACGCATCGTCGAGTATTTGATACACTTCCAGGGCTGGAACTCGTCCTGGGATCGGAAGGTTAGCGAGGATTTCATCCTGAAGGACACGGAAGAGAATCGCCAGCTGCAGAAGGATTTGGCGGAAAAATCACAGCTTTACCAAGGTGGTTATCTGTATCGAAAGGAGCGGAAGAAACAACGCGCCAAAAGTTTAACGGATCGAATCGAAAGCTTGACGAGTGCAAAGACGCAATCCATCAATCCCTCGTCGGAGGACGGAAGCTCGTGCAGTAACGGTTTCAGCAGGGACGAACATGAATACCATATTGATGACATGGATGAATACTACAGCAGCTCGGTCGAGAGCTCGCACGAGGAGGAAAAGGTGTACCTGCAAGCGGGCAGCAAGTTCCGCAAGCATCTCGACCTCGACCAGCATCTGATCGTGTCCGGCACGATGCTGGTGGAGCTGCCGGCCAAGCAGCCGGTGGTGACGATACTGGAAGATTTCGTGCGCTACTACACCATCCGCCAGCTGTTTGAGTGCGGCCATCAGGAGCAAACAAAGTCCCGCCGACGCAACAGCTCAGCCGTACGCACCGAGCACAAGGTACGCGACTACGAGCAGATTCGTACGAACGTCGAGCTGTGCAAGGAGGTGGCGG ATGGGCTGCGCGT TTACTTCGACTTTACGCTGCAGGACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX624574             [                                            GTGAAACAGTTTTGATACGACGACGGGCAGAACCTGCACGGCTTCAAGATTGAGTCTCCTAGCATGGTCTCAACCCGTGGCCACAACACGAAGTACAAATTCTGCGATGGCGAAAAGGTGCTCTGCTACGAGCCGGATCCGACCAAAGCGAAGGTCCTGTACGACTCGAAGGTGCTGGAAGTTTCCGAGGGAAAGGACAAGCGGGGCCGACGCATCGTCGAGTATTTGATACACTTCCAGGGCTGGAACTCGTCCTGGGATCGGAAGGTTAGCGAGGATTTCATCCTGAAGGACACGGAAGAGAATCGCCAGCTGCAGAAGGATTTGGCGGAAAAATCACAGCTTTACCAAGGTGGTTATCTGTATCGAAAGGAGCGAAAGAAACAACGCGCCAAAAGTTTAACGGATCGAATCGAAAGCTTGACGAGTGCAAAGACGCAATCCATCAATCCCTCGTCGGAGGACGGAAGCTCGTGCAGTAACGGTTTCAGCAGGGACGAACATGAATACCATATTGATGACATGGATGAATACTACAGCAGCTCGGTCGAGAGCTCGCACGAGGAGGAAAAGGTGTACCTGCAAGCGGGCAGCAAGTTCCGCAAGCATCTCGACCTCGACCAGCATCTGATCGTGTCCGGCACGATGCTGGTGGAGCTGCCGGCCAAGCAGCCGGTGGTGACGATACTGGAAGATTTCGTGCGCTACTACACCATCCGCCAGCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX604833             [                                                                                                                                                                                                             CGACTCGAAGGTGCTGGAAGTTTCCGAGGGAAAGGACAAGCGGGGCCGACGCATCGTCGAGTATTTGATACACTTCCAGGGCTGGAACTCGT TTGGGATCGGAAGGTTAGCGAGGATTTCATCCTGAAGGACACGGAAGAGAATCGCCAGCTGCAGAAGGATTTGGCGGAAAAATCACAGCTTTACCAAGGTGGTTATCTGTATCGAAAGGAGCGGAAGAAACAACGCGCCAAAAGTTTAACGGATCGAATCGAAAGCTTGACGAGTGCAAAGACGCAATCCATCAATCCCTCGTCGGAGGACGGAAGCTCGTGCAGTAACGGTTTCAGCAGGGACGAACATGAATACCATATTGATGACATGGATGAATACTACAGCAGCTCGGTCGAGAGCTCGCACGAGGAGGAAAAGGTGTACCTGCAAGCGGGCAGCAAGTTCCGCAAGCATCTCGACCTCGACCAGCATCTGATCGTGTCCGGCACGATGCTGGTGGAGCTGCCGGCCAAGCAGCCGGTGGTGACGATACTGGAAGATTTCGTGCGCTACTACACCATCCGCCAGCTGTTTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX603134             [                                                                                                                                                                                                                                                                                                                                                                                             CACAGCTTTACCAAGGTGGTTATCTGTATCGAAAGGAGCGGAAGAAACAACGCGCCAAAAGTTTAACGGATCGAATCGAAAGCTTGACGAGTGCAAAGACGCAATCCATCAATCCCTCGTCGGAGGACGGAAGCTCGTGCAGTAACGGTTTCAGCAGGGACGAACATGAATACCATATTGATGACATGGATGAATACTACAGCAGCTCGGTCGAGAGCTCGCACGAGGAGGAAAAGGTGTACCTGCAAGCGGGCAGCAAGTTCCGCAAGCATCTCGACCTCGACCAGCATCTGATCGTGTCCGGCACGATGCTGGTGGAGCTGCCGGCCAAGCAGCCGGTGGTGACGATACTGGAAGATTTCGTGCGCTACTACACCATCCGCCAGCTGTTTGAGTGCTGCCATCACGAGCAAACAAAGTCCCGCCGACGCAACAGCTCAGCCGTACGCACCGAGCACAAGGTACGCGACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS098JF             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCACGAGGAGGAAAAGGTGTACCTGCAAGCGGGCAGCAAGTTCCGCAAGCATCTCGACCTCGACCAGCATCTGATCGTGTCCGGCACGATGCTGGTGGAGCTGCCGGCCAAGCAGCCGGTGGTGACGATACTGGAAGATTTCGTGCGCTACTACACCATCCGCCAGCTGTTTGAGTGCGGCCATCAGGAGCAAAAAAAGTCCCGCCGACGCAACAGCTCAGCCGTACGCACCGAGCACAAGGTACGCGACTACGAGCAGATTCGTACGAACGTCGAGCTGTGCAAGGAGGTGGCGGAATGGG TGCGCGTGTAACTTCGACTTTACGCTGCAGGACTTTCTGCTGTATCCGCAGGAAAAACCACAGGCTCAGATCGTCCTGGCCGAGGACAATCTGCGTAGCTTCACGTACATTGCATCGCGCAACCTGTCCGTGGACATGCTGGCCGTTAAGCTCAACTCGCCCACGGCGGACGTGCATCAGCCGCTGAGCGAACATTCCGACCAGCAGTCGTCATCGGCAACCTCGGCGGAGGAACGTCGCCGGCGTCGATTGCGCTCGCACAAGAACGAGGAGAACGAGTTTGTGCTGGACTTTGGAGCGCTGCATCAAAGTACGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGGGACGATAAGCTGAAGCTGTTGCTCAAGTTTTTGGACATATTTGCCGAGTTTATCGAGGAGCACGAGGAATGGTTTGGCAAGCAGTTTTACTTCAGCCTAAAGGACAACGACATTTGAACCGATGGCGCCCGTCGATTAGTGGACGGGTATGGTTGGGCTCTTGCACGTGGATGGGTATTTTTCGAAACGAAAAAAATTTTCACGCAAGTGTTTGGAATAAATGTGACC]


>consensus_6176#0 AACACAACAATAATCCGGCGTTTTGTTTCCCCCGCTGTATGTGCGTAAAACAGTTTTGAT ACCACGACGGGCAGAACCTGCACGGCTTCAAGATTGAGTCTCCTAGCATGGTCTCAACCC GTGGCCACAACACGAAGTACAAATTCTGCGATGGCGAAAAGGTGCTCTGCTACGAGCCGG ATCCGACCAAAGCGAAGGTCCTGTACGACTCGAAGGTGCTGGAAGTTTCCGAGGGAAAGG ACAAGCGGGGCCGACGCATCGTCGAGTATTTGATACACTTCCAGGGCTGGAACTCGTCCT GGGATCGGAAGGTTAGCGAGGATTTCATCCTGAAGGACACGGAAGAGAATCGCCAGCTGC AGAAGGATTTGGCGGAAAAATCACAGCTTTACCAAGGTGGTTATCTGTATCGAAAGGAGC GGAAGAAACAACGCGCCAAAAGTTTAACGGATCGAATCGAAAGCTTGACGAGTGCAAAGA CGCAATCCATCAATCCCTCGTCGGAGGACGGAAGCTCGTGCAGTAACGGTTTCAGCAGGG ACGAACATGAATACCATATTGATGACATGGATGAATACTACAGCAGCTCGGTCGAGAGCT CGCACGAGGAGGAAAAGGTGTACCTGCAAGCGGGCAGCAAGTTCCGCAAGCATCTCGACC TCGACCAGCATCTGATCGTGTCCGGCACGATGCTGGTGGAGCTGCCGGCCAAGCAGCCGG TGGTGACGATACTGGAAGATTTCGTGCGCTACTACACCATCCGCCAGCTGTTTGAGTGCG GCCATCAGGAGCAAACAAAGTCCCGCCGACGCAACAGCTCAGCCGTACGCACCGAGCACA AGGTACGCGACTACGAGCAGATTCGTACGAACGTCGAGCTGTGCAAGGAGGTGGCGGATG GGCTGCGCGTTTACTTCGACTTTACGCTGCAGGACTATCTGCTGTATCCGCAGGAAAAAC CACAGGCTCAGATCGTCCTGGCCGAGGACAATCTGCGTAGCTTCACGTACATTGCATCGC GCAACCTGTCCGTGGACATGCTGGCCGTTAAGCTCAACTCGCCCACGGCGGACGTGCATC AGCCGCTGAGCGAACATTCCGACCAGCAGTCGTCATCGGCAACCTCGGCGGAGGAACGTC GCCGGCGTCGATTGCGCTCGCACAAGAACGAGGAGAACGAGTTTGTGCTGGACTTTGGAG CGCTGCATCAAAGTACGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGGGACGATAAG CTGAAGCTGTTGCTCAAGTTTTTGGACATATTTGCCGAGTTTATCGAGGAGCACGAGGAA TGGTTTGGCAAGCAGTTTTACTTCAGCCTAAAGGACAACGACATTTGAACCGATGGCGCC CGTCGATTAGTGGACGGGTATGGTTGGGCTCTTGCACGTGGATGGGTATTTTTCGAAACG AAAAAAATTTTCACGCAAGTGTTTGGAATAAATGTGACC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)