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Anopheles gambiae
cluster # 6227 cluster # 6227       Sequences # 5       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6227#0 length = 1146 sequences # 1  
consensus_6227#1 length = 1107 sequences # 1  
consensus_6227#2 length = 755 sequences # 2  
consensus_6227#3 length = 662 sequences # 1  

consensusID : consensus_6227#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1146
fasta sequence
                              [AGTGGCGGCGGAAGANTGAAGCATAAGATCAGTAAATTATGGTACAAAAAGTGTAAAGAATCGGTTCCACGCCACGGGACGCTAACAATCGTACAGCGGTACGACCGCCGCTAAAGATTAATCGTACAACGGTACCACAAACGCTTGTTANCAACACGCTCTATAGGTTTTTTGCCACCATNCAGCAANACACCACCACCATTTTAATCACATTTTCAACACAAAGCATGCACAACCTTCCTGCCACAAGCACCACACCAAACACAGTCATTAGCACACCAAACACACCAGACACACCCCGGACAAACACAAGCACACAAACCCGGCANCAGGCACACACAGCAACAGGGGTTTTCANACACACACAGCCGCAGCAACAGCAACAGCCGCTAGTACCCNGNGGACCACGCCTCCGGTGGACCNNGACGCTGCCGGNGCCGAAGGCACCAAGCANGCACCCTACAGCGCTAACTAAAAACAAGACCAACAGCANACACCAANACACACAACGTTGTACNACACCCACTACTACACGACTAGGCCAATTCTTTANNCCANAACCCGACACCAGGCNACACACGCACACAAACATCCTAATTTTCAATTCACCACAAGGTGGTCATATGGGANAACGAAAACAAACGCGCAGGNCATTTATAGTTCCCCCCGGGCCTTCATCNTNTATCAGCTGGCNCGANTTTGGTTTGNCGGAGCCAGAAGGCCCAACAACGAGATCCGGGCCAGGCATTCAAATTTGGTTGGCCAGGTNGAAACTCAATGGCTCNAAAGANTATAACAGATCACAGCAACGNGAAAAAANCGAACAANCTCAAANAGCCAANCGGCAATTGAANCTTATTNNAAACAAAAGTACACCACGNCCANTAANGTTCTNAGATTCAANTTTATGCAACAAGGTTGGAATATTTGGGNCGGNAATTAACNCTGTTTTACCNCAACAACANACANATAATACACAANCGAANGANAATNCTAACTAAAAACCGCNCGCCTGTGGCCGTCCAANAAGCCATTAATTTCCCCACTTTTATCNACTGACAGGGGGNGATTAAACCATNGTNAGACANTTGGCGANCGTTGTGGCCGCCAGNAATGAGTAAACAANCGGNGGCTGTGACGTGGGGA]

[+] EMBL AL692293             [AGTGGCGGCGGAAGANTGAAGCATAAGATCAGTAAATTATGGTACAAAAAGTGTAAAGAATCGGTTCCACGCCACGGGACGCTAACAATCGTACAGCGGTACGACCGCCGCTAAAGATTAATCGTACAACGGTACCACAAACGCTTGTTANCAACACGCTCTATAGGTTTTTTGCCACCATNCAGCAANACACCACCACCATTTTAATCACATTTTCAACACAAAGCATGCACAACCTTCCTGCCACAAGCACCACACCAAACACAGTCATTAGCACACCAAACACACCAGACACACCCCGGACAAACACAAGCACACAAACCCGGCANCAGGCACACACAGCAACAGGGGTTTTCANACACACACAGCCGCAGCAACAGCAACAGCCGCTAGTACCCNGNGGACCACGCCTCCGGTGGACCNNGACGCTGCCGGNGCCGAAGGCACCAAGCANGCACCCTACAGCGCTAACTAAAAACAAGACCAACAGCANACACCAANACACACAACGTTGTACNACACCCACTACTACACGACTAGGCCAATTCTTTANNCCANAACCCGACACCAGGCNACACACGCACACAAACATCCTAATTTTCAATTCACCACAAGGTGGTCATATGGGANAACGAAAACAAACGCGCAGGNCATTTATAGTTCCCCCCGGGCCTTCATCNTNTATCAGCTGGCNCGANTTTGGTTTGNCGGAGCCAGAAGGCCCAACAACGAGATCCGGGCCAGGCATTCAAATTTGGTTGGCCAGGTNGAAACTCAATGGCTCNAAAGANTATAACAGATCACAGCAACGNGAAAAAANCGAACAANCTCAAANAGCCAANCGGCAATTGAANCTTATTNNAAACAAAAGTACACCACGNCCANTAANGTTCTNAGATTCAANTTTATGCAACAAGGTTGGAATATTTGGGNCGGNAATTAACNCTGTTTTACCNCAACAACANACANATAATACACAANCGAANGANAATNCTAACTAAAAACCGCNCGCCTGTGGCCGTCCAANAAGCCATTAATTTCCCCACTTTTATCNACTGACAGGGGGNGATTAAACCATNGTNAGACANTTGGCGANCGTTGTGGCCGCCAGNAATGAGTAAACAANCGGNGGCTGTGACGTGGGGA]


>consensus_6227#0 AGTGGCGGCGGAAGANTGAAGCATAAGATCAGTAAATTATGGTACAAAAAGTGTAAAGAA TCGGTTCCACGCCACGGGACGCTAACAATCGTACAGCGGTACGACCGCCGCTAAAGATTA ATCGTACAACGGTACCACAAACGCTTGTTANCAACACGCTCTATAGGTTTTTTGCCACCA TNCAGCAANACACCACCACCATTTTAATCACATTTTCAACACAAAGCATGCACAACCTTC CTGCCACAAGCACCACACCAAACACAGTCATTAGCACACCAAACACACCAGACACACCCC GGACAAACACAAGCACACAAACCCGGCANCAGGCACACACAGCAACAGGGGTTTTCANAC ACACACAGCCGCAGCAACAGCAACAGCCGCTAGTACCCNGNGGACCACGCCTCCGGTGGA CCNNGACGCTGCCGGNGCCGAAGGCACCAAGCANGCACCCTACAGCGCTAACTAAAAACA AGACCAACAGCANACACCAANACACACAACGTTGTACNACACCCACTACTACACGACTAG GCCAATTCTTTANNCCANAACCCGACACCAGGCNACACACGCACACAAACATCCTAATTT TCAATTCACCACAAGGTGGTCATATGGGANAACGAAAACAAACGCGCAGGNCATTTATAG TTCCCCCCGGGCCTTCATCNTNTATCAGCTGGCNCGANTTTGGTTTGNCGGAGCCAGAAG GCCCAACAACGAGATCCGGGCCAGGCATTCAAATTTGGTTGGCCAGGTNGAAACTCAATG GCTCNAAAGANTATAACAGATCACAGCAACGNGAAAAAANCGAACAANCTCAAANAGCCA ANCGGCAATTGAANCTTATTNNAAACAAAAGTACACCACGNCCANTAANGTTCTNAGATT CAANTTTATGCAACAAGGTTGGAATATTTGGGNCGGNAATTAACNCTGTTTTACCNCAAC AACANACANATAATACACAANCGAANGANAATNCTAACTAAAAACCGCNCGCCTGTGGCC GTCCAANAAGCCATTAATTTCCCCACTTTTATCNACTGACAGGGGGNGATTAAACCATNG TNAGACANTTGGCGANCGTTGTGGCCGCCAGNAATGAGTAAACAANCGGNGGCTGTGACG TGGGGA



consensusID : consensus_6227#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1107
fasta sequence
                              [TCCTAGTCAGAATCCCGAGGTATTTCGAGGCGGAAAGTAGGAACCAGGAGTTTGCGATTAATATTCCTTCGAGGATGCGGGCTGCAAGGAGCTGCTGGATAAGTACGCCAACGAGGAGGATTCAAGCTTCAATGTAGAAAATGCTTCGTCAAGCAGTTCCGACTGTTCCCTGTCCTGATGCTGATCCTTCACCCAAGAAGCCTACCCTGGNAGACGTCACCTGGTTGCACGAATGTGAGCATGTCCCAGCCAAAAGCAAAACGGAGGCACAACAAAGCAGCAGCAACATNACGACCAGCTCTGAAAAGCGGTATACAGTCCGAGTAGAACAAACAAGNAACGGACGTTGGATTTACGNGAATACCTACANGACGCCCGAAGGAAAGTANANGNCACTTGCTACCCCGCAACAAAACATACAAAACGGACTCAGNCCAATCCGGATCCAANATACGGGNNACGGGATATTGGAAACACATTATGGTGGACCAACAAAACNTGGTAGCACGACTNAAACGTNACCCNCANAATCATCCGACTAGTCAGTCGAANACACTGANGGTANNCCAAACACACGGGAGGAANNCCCGGANTAAANTTTGGTGCTTAACATNCAAANACTTGNGNTCGCTTNCNCCCACATCACCCCCGNGGAAAACACAACCTTATAACTCANACGCAAACACNCCCACCTTATTCCNCANNNAAAGGAAANTATCACAGACGGNAAACACAGCCCATTNNGNANGCCCCCGAATGGNAGCATTATCTGGCCACCCNGCCTGCNAACATAACAACCGACAATACNATGGAGNTACTCACTAACCNAAAAAAAANCANACAAAATAAAACAAAAANCACAAATACACCACAACAAANACCACCCCCACTCAGCAAACAGANCTTCCCCATAACNTACAACATCACAAAACTTTCCACACCAATANTNNCCACATANNNACNNTTCCCACTTACCCCAATACTNTAATCCACCCAATACCTATCANCACANAAATCCTACCATANACCATTACATNAACNCACACNNACCCACNTACCATTCACATTANATACCATACNAACCACCATCACCTCATANCCAAACNA]

[+] EMBL AL695178             [TCCTAGTCAGAATCCCGAGGTATTTCGAGGCGGAAAGTAGGAACCAGGAGTTTGCGATTAATATTCCTTCGAGGATGCGGGCTGCAAGGAGCTGCTGGATAAGTACGCCAACGAGGAGGATTCAAGCTTCAATGTAGAAAATGCTTCGTCAAGCAGTTCCGACTGTTCCCTGTCCTGATGCTGATCCTTCACCCAAGAAGCCTACCCTGGNAGACGTCACCTGGTTGCACGAATGTGAGCATGTCCCAGCCAAAAGCAAAACGGAGGCACAACAAAGCAGCAGCAACATNACGACCAGCTCTGAAAAGCGGTATACAGTCCGAGTAGAACAAACAAGNAACGGACGTTGGATTTACGNGAATACCTACANGACGCCCGAAGGAAAGTANANGNCACTTGCTACCCCGCAACAAAACATACAAAACGGACTCAGNCCAATCCGGATCCAANATACGGGNNACGGGATATTGGAAACACATTATGGTGGACCAACAAAACNTGGTAGCACGACTNAAACGTNACCCNCANAATCATCCGACTAGTCAGTCGAANACACTGANGGTANNCCAAACACACGGGAGGAANNCCCGGANTAAANTTTGGTGCTTAACATNCAAANACTTGNGNTCGCTTNCNCCCACATCACCCCCGNGGAAAACACAACCTTATAACTCANACGCAAACACNCCCACCTTATTCCNCANNNAAAGGAAANTATCACAGACGGNAAACACAGCCCATTNNGNANGCCCCCGAATGGNAGCATTATCTGGCCACCCNGCCTGCNAACATAACAACCGACAATACNATGGAGNTACTCACTAACCNAAAAAAAANCANACAAAATAAAACAAAAANCACAAATACACCACAACAAANACCACCCCCACTCAGCAAACAGANCTTCCCCATAACNTACAACATCACAAAACTTTCCACACCAATANTNNCCACATANNNACNNTTCCCACTTACCCCAATACTNTAATCCACCCAATACCTATCANCACANAAATCCTACCATANACCATTACATNAACNCACACNNACCCACNTACCATTCACATTANATACCATACNAACCACCATCACCTCATANCCAAACNA]


>consensus_6227#1 TCCTAGTCAGAATCCCGAGGTATTTCGAGGCGGAAAGTAGGAACCAGGAGTTTGCGATTA ATATTCCTTCGAGGATGCGGGCTGCAAGGAGCTGCTGGATAAGTACGCCAACGAGGAGGA TTCAAGCTTCAATGTAGAAAATGCTTCGTCAAGCAGTTCCGACTGTTCCCTGTCCTGATG CTGATCCTTCACCCAAGAAGCCTACCCTGGNAGACGTCACCTGGTTGCACGAATGTGAGC ATGTCCCAGCCAAAAGCAAAACGGAGGCACAACAAAGCAGCAGCAACATNACGACCAGCT CTGAAAAGCGGTATACAGTCCGAGTAGAACAAACAAGNAACGGACGTTGGATTTACGNGA ATACCTACANGACGCCCGAAGGAAAGTANANGNCACTTGCTACCCCGCAACAAAACATAC AAAACGGACTCAGNCCAATCCGGATCCAANATACGGGNNACGGGATATTGGAAACACATT ATGGTGGACCAACAAAACNTGGTAGCACGACTNAAACGTNACCCNCANAATCATCCGACT AGTCAGTCGAANACACTGANGGTANNCCAAACACACGGGAGGAANNCCCGGANTAAANTT TGGTGCTTAACATNCAAANACTTGNGNTCGCTTNCNCCCACATCACCCCCGNGGAAAACA CAACCTTATAACTCANACGCAAACACNCCCACCTTATTCCNCANNNAAAGGAAANTATCA CAGACGGNAAACACAGCCCATTNNGNANGCCCCCGAATGGNAGCATTATCTGGCCACCCN GCCTGCNAACATAACAACCGACAATACNATGGAGNTACTCACTAACCNAAAAAAAANCAN ACAAAATAAAACAAAAANCACAAATACACCACAACAAANACCACCCCCACTCAGCAAACA GANCTTCCCCATAACNTACAACATCACAAAACTTTCCACACCAATANTNNCCACATANNN ACNNTTCCCACTTACCCCAATACTNTAATCCACCCAATACCTATCANCACANAAATCCTA CCATANACCATTACATNAACNCACACNNACCCACNTACCATTCACATTANATACCATACN AACCACCATCACCTCATANCCAAACNA



consensusID : consensus_6227#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 755
fasta sequence
                              [GGTAAAGTAGAACACGTGAAACCATTATTGCTATTGCTT-AATGC-ATCCATTTTCGCTCGATGGTCTCGAAAAAGGAGGGAAAATTA-GGAAAAAAACAGAAAGAAG-CCGATACGCTTACAGTTGAGGAAAGAGCAGGC-AACACAG-CCATGCTTCCAAAAGTTCCAAACACGAATGGATTAGGATCTCAACGGATATAATACCTTACACCAGAAGAAGGACAGGTCGGGTCAAAGAAGCCAACAACACAGCCTGCATCCCGCAAGGGATTGGGTTGGGTGGTAGTAAAAAGTGTGGTGTATGTTTTGAAGTGGATAGAAGGTCACCAGTCAAAAGAAAACACACGACGCAAGACGGAATAACCTCAATGCGCGCAACTGTAGTTGCGCAAACTGATCGTCTTGATACGCGATATGTGTTGGACAAACTGGACACACAGACATTCGTTGTAGTAATATTTTGTAGTATTTTTTTCTGCTGCCCATTTTTGAGCAAAACAAAGAAATAACAAAACCCTCACCCCCACTCCCTTTCACGAGACAACAAAAGTAAAAACGAACACGTGGTCGGTCGCGATCACGTGTCTCTTTAAAGAAGTAATGTGTTACCTTCCTGTCTAGTGGAGTGAATTTCTTTCTCGTACAACAGCATCAAGTAAAAACAAATCAACAAACGTTAAAAATCAATTGCAAAATTCTACAATCGATCGATGAAATAACGTGAAGGTTTATGCTTCACTGATGACGATTAGCAAAGGG]

[+] EMBL AL933600             [GGTAAAGTAGAACACGTGAAACCATTATTGCTATTGCTT AATGC ATCCATTTTCGCTCGATGGTCTCGAAAAAGGAGGGAAAATTA GGAAAAAAACAGAAAGAAG CCGATACGCTTACAGTTGAGGAAAGAGCAGGC AACACAG CCATGCTTCCAAAAGTTCCAAACACGAATGGATTAGGATCTCAACGGATATAATACCTTACACCAGAAGAAGGACAGGTCGGGTCAAAGAAGCCAACAACACAGCCTGCATCCCGCAAGGGATTGGGTTGGGTGGTAGTAAAAAGTGTGGTGTATGTTTTGAAGTGGATAGAAGGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX627265             [                          ATTGCTATTGCTTAAATGCAATCCATTTTCGCTCGATGGTCTCGAAAAAGGAGGGAAAATTAGGGAAAAAAACAGAAAGAAGCCCGATACGCTTACAGTTGAGGAAAGAGCAGGCAAACACAGCCCATGCTTCCAAAAGTTCCAAACACGAATGGATTAGGATCTCAACGGATATAATACCTTACACCAGAAGAAGGACAGGTCGGGTCAAAGAAGCCAACAACACAGCCTGCATCCCGCAA GGATTGGGTTGGGTGGTAGTAAAAAGTGTGGTGTATGTTTTGAAGTGGATAGAAGGTCACCAGTCAAAAGAAAACACACGACGCAAGACGGAATAACCTCAATGCGCGCAACTGTAGTTGCGCAAACTGATCGTCTTGATACGCGATATGTGTTGGACAAACTGGACACACAGACATTCGTTGTAGTAATATTTTGTAGTATTTTTTTCTGCTGCCCATTTTTGAGCAAAACAAAGAAATAACAAAACCCTCACCCCCACTCCCTTTCACGAGACAACAAAAGTAAAAACGAACACGTGGTCGGTCGCGATCACGTGTCTCTTTAAAGAAGTAATGTGTTACCTTCCTGTCTAGTGGAGTGAATTTCTTTCTCGTACAACAGCATCAAGTAAAAACAAATCAACAAACGTTAAAAATCAATTGCAAAATTCTACAATCGATCGATGAAATAACGTGAAGGTTTATGCTTCACTGATGACGATTAGCAAAGGG]


>consensus_6227#2 GGTAAAGTAGAACACGTGAAACCATTATTGCTATTGCTTAATGCATCCATTTTCGCTCGA TGGTCTCGAAAAAGGAGGGAAAATTAGGAAAAAAACAGAAAGAAGCCGATACGCTTACAG TTGAGGAAAGAGCAGGCAACACAGCCATGCTTCCAAAAGTTCCAAACACGAATGGATTAG GATCTCAACGGATATAATACCTTACACCAGAAGAAGGACAGGTCGGGTCAAAGAAGCCAA CAACACAGCCTGCATCCCGCAAGGGATTGGGTTGGGTGGTAGTAAAAAGTGTGGTGTATG TTTTGAAGTGGATAGAAGGTCACCAGTCAAAAGAAAACACACGACGCAAGACGGAATAAC CTCAATGCGCGCAACTGTAGTTGCGCAAACTGATCGTCTTGATACGCGATATGTGTTGGA CAAACTGGACACACAGACATTCGTTGTAGTAATATTTTGTAGTATTTTTTTCTGCTGCCC ATTTTTGAGCAAAACAAAGAAATAACAAAACCCTCACCCCCACTCCCTTTCACGAGACAA CAAAAGTAAAAACGAACACGTGGTCGGTCGCGATCACGTGTCTCTTTAAAGAAGTAATGT GTTACCTTCCTGTCTAGTGGAGTGAATTTCTTTCTCGTACAACAGCATCAAGTAAAAACA AATCAACAAACGTTAAAAATCAATTGCAAAATTCTACAATCGATCGATGAAATAACGTGA AGGTTTATGCTTCACTGATGACGATTAGCAAAGGG



consensusID : consensus_6227#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 662
fasta sequence
                              [CCGCAAGTATGGGTCCGAAGAAACCGTCTGAGAAGCCCGCCGGCCAACCGGCCGAAAAGAAAGAGAAGAAGCCGGCAGCCGCCGCCGCTGCTACGGCTTCCGGATCTGGTGAGAAGAAACCCGCAGCGGAAAAGAAGCCCGCGGCGGAGAAGAAGCCAGCAAAGGCTGCCGCTGCCGCCGCTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCTGCCGCCGCCGACAAGAAGGGCGCTGCCAAGCCCGCTGCCAAGGGAGCTAAGGCAGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGGCTGCCGGTAGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGAAGGCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCCAAGCGTGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGTCCGCAAGATCCGCACGTCCGTGCACTTCAAGCGGCCGAAGACCCTGAAACTTCCGCGTCGTCCCAAGTACCCGAAGGAAGTCGGTCGCCAAGCGCAGCCGCATGGATGCGTACAATATAATTAAGTACCC]

[+] EMBL BM588274             [CCGCAAGTATGGGTCCGAAGAAACCGTCTGAGAAGCCCGCCGGCCAACCGGCCGAAAAGAAAGAGAAGAAGCCGGCAGCCGCCGCCGCTGCTACGGCTTCCGGATCTGGTGAGAAGAAACCCGCAGCGGAAAAGAAGCCCGCGGCGGAGAAGAAGCCAGCAAAGGCTGCCGCTGCCGCCGCTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCTGCCGCCGCCGACAAGAAGGGCGCTGCCAAGCCCGCTGCCAAGGGAGCTAAGGCAGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGGCTGCCGGTAGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGAAGGCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCCAAGCGTGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGTCCGCAAGATCCGCACGTCCGTGCACTTCAAGCGGCCGAAGACCCTGAAACTTCCGCGTCGTCCCAAGTACCCGAAGGAAGTCGGTCGCCAAGCGCAGCCGCATGGATGCGTACAATATAATTAAGTACCC]


>consensus_6227#3 CCGCAAGTATGGGTCCGAAGAAACCGTCTGAGAAGCCCGCCGGCCAACCGGCCGAAAAGA AAGAGAAGAAGCCGGCAGCCGCCGCCGCTGCTACGGCTTCCGGATCTGGTGAGAAGAAAC CCGCAGCGGAAAAGAAGCCCGCGGCGGAGAAGAAGCCAGCAAAGGCTGCCGCTGCCGCCG CTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCTGCCGCCGCCGACAAGA AGGGCGCTGCCAAGCCCGCTGCCAAGGGAGCTAAGGCAGCGGCCGGTGCCGGTGCCAAGG GTGGCAAAGCGGCTGCCGGTAGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGC GCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGG AGCAGGTGAAGGCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGC GTGCCAAGCGTGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGTCCGCAAGA TCCGCACGTCCGTGCACTTCAAGCGGCCGAAGACCCTGAAACTTCCGCGTCGTCCCAAGT ACCCGAAGGAAGTCGGTCGCCAAGCGCAGCCGCATGGATGCGTACAATATAATTAAGTAC CC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6227#0      AGTGGCGGCGGAAGANTGAAGCATAA-GATCAGTAAATTATGGTACAAAAA---GTGTAA 56
consensus_6227#1      -TCCTAGTCAGAATCCCGAGGTATTTCGAGGCGGAAAGTAGGAACCAGGAGTTTGCGATT 59
consensus_6227#3      ------------------------------------------------------------
consensus_6227#2      ------------------------------------------------------------
                                                                                  

consensus_6227#0      AGAATCGGTTCCACGCCACGGGACGCTAACAATCGTACAGCGGTACGACCGCCGCTAAAG 116
consensus_6227#1      AATATTCCTTCGAGGATGCGGGCTGCAAGGAGCTGCTG---GATAAGTACGCCAACGAGG 116
consensus_6227#3      ------------------------------------------------------------
consensus_6227#2      ------------------------------------------------------------
                                                                                  

consensus_6227#0      ATTAATCGTACAACGGTACCACAAACGCTTGTTANCAACACGCTCTATAGGTTTTTTGCC 176
consensus_6227#1      AGGATTCAAGCTTCAATGTAGAAAATGCT--TCGTCAAGCAGTTCCGACTGTTCCCTGTC 174
consensus_6227#3      ------------------------------------------------------------
consensus_6227#2      ------------------------------------------------------------
                                                                                  

consensus_6227#0      ACCATNCAGCAANACACCACCACCATTTTAATCACATTTTCAACACAAAGCATGCACAAC 236
consensus_6227#1      CTGATGCTGATCCTTCACCCAAGAAGCCTACCCTGGNAGACGTCACCTGGT-TGCACGAA 233
consensus_6227#3      ------------------------------------------------------------
consensus_6227#2      ------------------------------------------------------------
                                                                                  

consensus_6227#0      CTT---CCTGCCACAAGCACCACACCAAACACAGTCAT--TAGCACACCAAACACACCAG 291
consensus_6227#1      TGTGAGCATGTCCCAGCCAA-AAGCAAAACGGAGGCACAACAAAGCAGCAGCAACATNAC 292
consensus_6227#3      ------------------------------------------------------------
consensus_6227#2      ------------------------------------------------------------
                                                                                  

consensus_6227#0      ACACACCCCGGACAAACACAAGCACACAAACCCGGCANCAGGCACACACAGCAACAGGGG 351
consensus_6227#1      GACCAGCTCTGAAAAGCG---GTATACAGTCCGAGTAGAACAAACAAGNAACGGACGTTG 349
consensus_6227#3      ------------------------------------------------------------
consensus_6227#2      ------------------------------------------------------------
                                                                                  

consensus_6227#0      TTTTCANACACACACAGCCGCAGCAACAGCAACAGCCGCTAGTACCCNGNGGACCACGCC 411
consensus_6227#1      GATTTACGNGAATACCTACANGACGCCCGAAGGAAAGTANANGNCACTTGCTACCCCGCA 409
consensus_6227#3      ------------------------------------------------------------
consensus_6227#2      --------------GGTAAAGTAGAACACGTGAAACCATTATTGCTATTGCT-TAATGCA 45
                                                                                  

consensus_6227#0      TCCGGTGGACCNNGACGCTGCCGGNGCCGAAGGCACCAAGCANGCACCCTACAGCGCTAA 471
consensus_6227#1      ACAAAACATACAAAACGGACTCAGNCCAATCCGGATCCAANATACGGGNNACGGGAT--A 467
consensus_6227#3      -------CCGCAAGTATGGGTCCGAAGAAACCG--TCTGAGAAGCCCGCCGGCCAACCGG 51
consensus_6227#2      TCCATTTTCGCTCGATGGTCTCGAAAAAGGAGGGAA-AATTAGGAAAAAAACAGAAAGAA 104
                                *          *          *        *                  

consensus_6227#0      CTAAAAACAAGACCAACAGCANACACCAANACACACAACGTTGTACNACACCCAC--TAC 529
consensus_6227#1      TTGGAAACA----CATTATGGTGGACCAACA-AAACNTGGTAGCACGACTNAAACGTNAC 522
consensus_6227#3      CCGAAAAGA-----AAGAGAAGAAGCCGGCAGCCGCCGC-CGCTGCTACGGCTTCCGGAT 105
consensus_6227#2      GCCGATACG-----CTTACAGTTGAGGAAAGAGCAGGCAACACAGCCATGCTTCCAAAAG 159
                          * *          *                           * *      *   * 

consensus_6227#0      TACACGACTAGGCCAATTCTTTANNCCANAAC-CCGACACCAGGCNACACACGCACACAA 588
consensus_6227#1      CCNCANAATCATCCGACTAGTCAGTCGAANACACTGANGGTANNCCAAACACACGGGAGG 582
consensus_6227#3      CTGGTGAGAAGAAACCCGCAGCGGAAAAGAAG-CCCGCGGCGGAGAAGAAGCCAGCAAAG 164
consensus_6227#2      TTCCAAACACGAATGGATTAGGATCTCAACGG--ATATAATACCTTACACCAGAAGAAGG 217
                            *                    *                  * *           

consensus_6227#0      ACATCCTAATTTTCAATTCACCACAAGGTGGTCATATGGGANAACGAAAACAAACGCGC- 647
consensus_6227#1      AANNCCCGGANTAAANTTTGGTGCTTAACATNCAAANACTTGNGNTCGCTTNCNCCCAC- 641
consensus_6227#3      GCTGCCGCTGCCGCCGCTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCT 224
consensus_6227#2      ACAGGTCGGGTCAAAGAAGCCAACAACACAGCCTGCATCCCGCAAGGGATTGGGTTGGGT 277
                                                      *                           

consensus_6227#0      AGGNCATTTATAGTTCCCCCCGGGCCTTCATCNTNTAT-CAGCTGGCNCGANTTTGGTTT 706
consensus_6227#1      ATCACCCCCGNGGAAAACAC-AACCTTATAACTCANACGCAAACACNCCCACCTTATTCC 700
consensus_6227#3      GCCGCCGCCGACAAGAAGGGCGCTGCCAAGCCCGCTGCCAAGGGAGCTAAGGCAGCGGCC 284
consensus_6227#2      GGTAGTAAAAAGTGTGGTGTATGTTTTGAAGTGGATAG-AAGGTCACCAGTCAAAAGAAA 336
                                                              *                   

consensus_6227#0      GNCGGAGCCAGAAGGCCCAACA-A--CGAGATCCG-GGCCAGGCATTCAAATTT--GGTT 760
consensus_6227#1      NCANNNAAAGGAAANTATCACAGA--CGGNAAACACAGCCCATTNNGNANGCCCCCGAAT 758
consensus_6227#3      GGTGCCGGTGCCAAGGGTGGCAAAG-CGGCTGCCGGTAGCAAGCCCGCCAA-----GGCT 338
consensus_6227#2      ACACACGACGCAAGACGGAATAACCTCAATGCGCGCAACTGTAGTTGCGCA-----AACT 391
                                  *        *    *      *                         *

consensus_6227#0      GGCCAGGTNGAAACTCAAT-GGCTCN-AAAGANTATAACAGATCACAGCAACGNGAAAAA 818
consensus_6227#1      GGNAGCATTATCTGGCCAC-CCNGCC-TGCNAACATAACAACCGACAATACNATGGAGNT 816
consensus_6227#3      GGCGAGAAGAAGAAGCCGG-TGCGCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGT- 396
consensus_6227#2      GATCGTCTTGATACGCGATATGTGTTGGACAAACTGGACACACAGACATTCGTTGTAGTA 451
                      *              *               *     *                  *   

consensus_6227#0      ANCGAACAANCTCAAANAGCCAANCGGCAATTGAANCTTATTNNAAACAAAAGTACACC- 877
consensus_6227#1      ACTCACTAACCNAAAAAAA--ANCANACAAAATAAA---ACAAAAANCACAAATACACC- 870
consensus_6227#3      -CCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGAAGG--CCAAGATCCAGAAGGGCATCC 453
consensus_6227#2      ATATTTTGTAGTATTTTTTTCTGCTGCCCATTTTTGA----GCAAAACAAAGAAATAACA 507
                                                 *                *  ** *     * * 

consensus_6227#0      --ACGNCCANTAANGTTCTNAGATTCAANTTTATGCAACAAGGTTGGAATATTTGGGNCG 935
consensus_6227#1      --ACAACAAANACCACCCCCA--CTCAGCA------AACAGANCTTCCCCATAACNTACA 920
consensus_6227#3      AGAAGGCTCGTGCCACCGCTATGCTGCGTGCCA---AGCGTGCCTCGACCAAGCTGGTCA 510
consensus_6227#2      AAACCCTCACCCCCACTCCCTTTCACGAGACAACAAAAGTAAAAACGAACACGTGGTCGG 567
                        *                                 *             *         

consensus_6227#0      GNAATTAACNCTGT-TTTACCNCAACAACANACANATAATACACAANCGAANGANAATNC 994
consensus_6227#1      ACATCACAAAACTT-TCCACACCAATANTNNCCACATANNNACNNTTCCCACTTACCCCA 979
consensus_6227#3      AGGGTCCGTATGGAACCTGCGTCCGCAAGATCCGCACGTCCGTGCACTTCAAGCGGCCGA 570
consensus_6227#2      TCG--CGATCACGTGTCTCTTTAAAGAAGTAATGTGTTACCTTCCTGTCTAGTGGAGTGA 625
                                                *                       *         

consensus_6227#0      TAACTAAAA----ACCGCNCGCCTGTGGCCGTCCAAN--AAGCCA-TTAATTTCCCCACT 1047
consensus_6227#1      ATACTNTAA----TCCACCCAATACCTATCANCACAN--AAATC--CTACCATANACCAT 1031
consensus_6227#3      AGACCCTGAAACTTCCGCGTCGTCCCAAGTACCCGAAGGAAGTCGGTCGCCAAGCGCAGC 630
consensus_6227#2      ATTTCTTTC-----TCGTACAACAGCATCAAGTAAAAACAAATCAACAAACGTTAAAAAT 680
                                     *                   *   **  *                

consensus_6227#0      TTTATCNACTGACAGGGGGNGATTAAACCATNGTNAGACANTTGGCGANCGTTGTGGCCG 1107
consensus_6227#1      TACATNAACNCACACNNACCCACNTACCATTCACATTANAT------ACCATACNAACCA 1085
consensus_6227#3      CGCATGGATGCGTACAATATAATTAAGTACCC---------------------------- 662
consensus_6227#2      CAATTGCA---AAATTCTACAATCGATCGATGAAATAACGT---GAAGGTTTATGCTTCA 734
                          *  *     *       *   *                                  

consensus_6227#0      CCAGNAATGAGTAAACAANCGGNGGCTGTGACGTGGGGA 1146
consensus_6227#1      CCATCACCTCATANCCAAACNA----------------- 1107
consensus_6227#3      ---------------------------------------
consensus_6227#2      CTGATGACGATTAGCAAAGGG------------------ 755
                                                             




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)