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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6236#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 799 fasta sequence
[ATGCNGAGGCAGAATCCCCGAGGTTAAATGTAGTTGCGATACACAGCTATTAAATGCGACCAAAATGGTTCGAGAAATATCGTACGTTTCCATCAAATCTCGTTCTAAACCAGTGATTTTNGTGCACTCGTTAGTATCAAATCGATTTACGCGAACAATATGGCGTATTGTCCCTAATTCTGTTGACAGCCTCGGGCTAGCTATTTATTTTAACCCCGGAACCGGAAGGTTATNTGGTTATGTCNAACACCACGGTTAACCAATTCCCAATTCCAAAAAACCCAACNTAAAACCAACTTGGGTTTAATTTCCCCAGGCCGGGTTTTCCCCCGGTTGAATTCCCTTTTTAAAACCGGGTTTTCTGGGGGACCACACACACTTTTGGGACAAACACAAGGCGCTTTGGGGGTTTTTCAACCACACAAAGGGGTTGGGAAAAAAANGGACAATTTAACCAACNGGGAANCGACAAACCNGGTTGTGACATTCCAACCGCTGGGTGAGCTTAACACCACCGGAACTTTTTGGGGAGTTGGAGAAGACCCTGNCATTGAAAAAGACGANCCGCGGTGTGCTTCACAACGAACANCTTTTACTTTACCATTTTTTACACAACAGCNCGTTTTCAAAATTGTCCTTTCTTGGAATTCACCCCCCCCGGGGGAGCTTTTTGGNGCACAACGNGGGGGGATACATGCGAGGAAGAGGCATNATTATGAGGGGAGATTGTTGCAGAAAAAGGGGTTACATATTATTCACCGAGAGGATAATGGGGATTTAGGGTTGNGAGGACNGCACT]
[+] EMBL AL696540 [ATGCNGAGGCAGAATCCCCGAGGTTAAATGTAGTTGCGATACACAGCTATTAAATGCGACCAAAATGGTTCGAGAAATATCGTACGTTTCCATCAAATCTCGTTCTAAACCAGTGATTTTNGTGCACTCGTTAGTATCAAATCGATTTACGCGAACAATATGGCGTATTGTCCCTAATTCTGTTGACAGCCTCGGGCTAGCTATTTATTTTAACCCCGGAACCGGAAGGTTATNTGGTTATGTCNAACACCACGGTTAACCAATTCCCAATTCCAAAAAACCCAACNTAAAACCAACTTGGGTTTAATTTCCCCAGGCCGGGTTTTCCCCCGGTTGAATTCCCTTTTTAAAACCGGGTTTTCTGGGGGACCACACACACTTTTGGGACAAACACAAGGCGCTTTGGGGGTTTTTCAACCACACAAAGGGGTTGGGAAAAAAANGGACAATTTAACCAACNGGGAANCGACAAACCNGGTTGTGACATTCCAACCGCTGGGTGAGCTTAACACCACCGGAACTTTTTGGGGAGTTGGAGAAGACCCTGNCATTGAAAAAGACGANCCGCGGTGTGCTTCACAACGAACANCTTTTACTTTACCATTTTTTACACAACAGCNCGTTTTCAAAATTGTCCTTTCTTGGAATTCACCCCCCCCGGGGGAGCTTTTTGGNGCACAACGNGGGGGGATACATGCGAGGAAGAGGCATNATTATGAGGGGAGATTGTTGCAGAAAAAGGGGTTACATATTATTCACCGAGAGGATAATGGGGATTTAGGGTTGNGAGGACNGCACT]
consensusID : consensus_6236#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 665 fasta sequence
[CCGCGGACGCGTGGGTGCGTTCGGATCGTGAATGTTAGTTGCGATACACAGTATTAAATGCGACCCAAAATGGTTCGAGAAATATCGTACGTTTCCATCAAATCTCGTTCTAAACCAGTGATTTTTGTGCACTCGTTAGTATCAAATCGATTTACGCGAAAATATGGCGTATTGTCCCTAATTCTGTTGACAGCCCTCGGGCTGCTTTATTACCGACGAGTTTTGTTTCAAAAGTACATCCATCAAACACTACCACTGTATCAGCGTTCCGTATCCTTAACGTTTGGAAATGAAAGCTGGTTACAAGGTGAAGATACAGGAGAACGTGATCACTGGCTACCGATTGGTGAACCGAAAAAAAGGTTTAAAATATATTCAGCTTATTTTGATCCCCGGCTTGAGGTGGTTGAGTCCTTCCCTACGCCAGATGGATTTCTACCGTTCGGCAGTGTTCGCATCTTTGCAATATTGCCATTTCACGTACGAAAAGGAGACATATTTTGCAATTTCAGATCAGATAACACCTATGTAGCGCAACATCAAGCAGACCGGGTTGAAGCGGTTCATGAGCATTGGAATATGGAATTTGCCGCCAGTTATGTGATATGCAAACTTGCCGGAAATATTACTAAACGCGAAGCCCGCCTACCGGACGAGGTAGCTTT]
[+] EMBL BM604750 [CCGCGGACGCGTGGGTGCGTTCGGATCGTGAATGTTAGTTGCGATACACAGTATTAAATGCGACCCAAAATGGTTCGAGAAATATCGTACGTTTCCATCAAATCTCGTTCTAAACCAGTGATTTTTGTGCACTCGTTAGTATCAAATCGATTTACGCGAAAATATGGCGTATTGTCCCTAATTCTGTTGACAGCCCTCGGGCTGCTTTATTACCGACGAGTTTTGTTTCAAAAGTACATCCATCAAACACTACCACTGTATCAGCGTTCCGTATCCTTAACGTTTGGAAATGAAAGCTGGTTACAAGGTGAAGATACAGGAGAACGTGATCACTGGCTACCGATTGGTGAACCGAAAAAAAGGTTTAAAATATATTCAGCTTATTTTGATCCCCGGCTTGAGGTGGTTGAGTCCTTCCCTACGCCAGATGGATTTCTACCGTTCGGCAGTGTTCGCATCTTTGCAATATTGCCATTTCACGTACGAAAAGGAGACATATTTTGCAATTTCAGATCAGATAACACCTATGTAGCGCAACATCAAGCAGACCGGGTTGAAGCGGTTCATGAGCATTGGAATATGGAATTTGCCGCCAGTTATGTGATATGCAAACTTGCCGGAAATATTACTAAACGCGAAGCCCGCCTACCGGACGAGGTAGCTTT]
[+] EMBL BM612914 [ ccgCGTGAATGTTAGTTGCGATACACAGTATTAAATGCGACCCAAAATGGTTCGAGAAATATCGTACGTTTCCATCAAATCTCGTTCTAAACCAGTGATTTTTGTGCACTCGTTAGTATCAAATCGATTTACGCGAAAATATGGCGTATTGTCCCTAATTCTGTTGACAGCCCTCGGGCTGCTTTATTACCGACGAGTTTTGTTTCAAAAGTACATCCATCAAACACTACCACTGTATCAGCGTTCCGTATCCTTAACGTTTGGAAATGAAAGCTGGTTACAAGGTGAAGATACAGGAGAACGTGATCACTGGCTACCGATTGGTGAACCGAAAAAAAGGTTTAAAATATATTCAGCTTATTTTGATCCCCGGCTTGAGGTGGTTGAGTCCTTCCCTACGCCAGATGGATTTCTACCGTTCGGCAGTGTTCGCATCTTTGCAATATTGCCATTTCACGTACGAAAAGGAGACATATTTTGCAATTTCAGATCAGATAACACCTATGTAGCGCAACATCAAGCAGACCGGGTTGAAGCGGTTCATGAGCATTGGAATATGGAATTTGCCGCCAGTTATGTGATATGCAAACTTGCCGGAAATATTACT ]
consensusID : consensus_6236#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 619 fasta sequence
[CCGCGGACGCGTGGGCGTGAATGTTAGTTGCGATACACAGTATTAAATGCGACCCAAAATGGTTCGAGAAATATCGTACGTTTCCATCAGATCTCGTTCTAAACCAGTGATTTTTGTGCACTCGTTAGTATCAAATCGATTTACGCGAAAATATGGCGTATTGTCCCTAATTCTGTTGACAGCCCTCGGGCTGCTTTATTACCGACGAGTTTTGTTTCAAAAGTACATCCATCAAACACTACCACTGTATCAGCGTTCCGTATCCTTAACGTTTGGAAATGAAAGCTGGTTACAAGGTGAAGATACAGGAGAACGTGATCACTGGCTACCGATTGGTGAACCGAAAAAAAGGTTTAAAATATATTCAGCTTATTTTGATCCCCGGCTTGAGGTGGTTGAGTCCTTCCCTACGCCAGATGGATTTCTACCGTTCGGCAGTGTTCGCATCTTTGCAATATTGCCATTTCACGTACGAAAAGGAGACATATTTTGCAATTTCAGATCAGATAACACCTATGTAGCGCAACATCAAGCAGACCGGGTTGAAGCGGTTCATGAGCATTGGAATATGGAATTTGCCGCCAGTTATGTGATATGCAAACTTGCCGGAAATATTACT]
[+] EMBL BM601240 [CCGCGGACGCGTGGGCGTGAATGTTAGTTGCGATACACAGTATTAAATGCGACCCAAAATGGTTCGAGAAATATCGTACGTTTCCATCAGATCTCGTTCTAAACCAGTGATTTTTGTGCACTCGTTAGTATCAAATCGATTTACGCGAAAATATGGCGTATTGTCCCTAATTCTGTTGACAGCCCTCGGGCTGCTTTATTACCGACGAGTTTTGTTTCAAAAGTACATCCATCAAACACTACCACTGTATCAGCGTTCCGTATCCTTAACGTTTGGAAATGAAAGCTGGTTACAAGGTGAAGATACAGGAGAACGTGATCACTGGCTACCGATTGGTGAACCGAAAAAAAGGTTTAAAATATATTCAGCTTATTTTGATCCCCGGCTTGAGGTGGTTGAGTCCTTCCCTACGCCAGATGGATTTCTACCGTTCGGCAGTGTTCGCATCTTTGCAATATTGCCATTTCACGTACGAAAAGGAGACATATTTTGCAATTTCAGATCAGATAACACCTATGTAGCGCAACATCAAGCAGACCGGGTTGAAGCGGTTCATGAGCATTGGAATATGGAATTTGCCGCCAGTTATGTGATATGCAAACTTGCCGGAAATATTACT]
[+] EMBL BM636710 [ ccgGATTTACGCGAAAATATGGCGTATTGTCCCTAATTCTGTTGACAGCCCTCGGGCTGCTTTATTACCGACGAGTTTTGTTTCAAAAGTACATCCATCAAACACTACCACTGTATCAGCGTTCCGTATCCTTAACGTTTGGAAATGAAAGCTGGTTACAAGGTGAAGATACAGGAGAACGTGATCACTGGCTACCGATTGGTGAACCGAAAAAAAGGTTTAAAATATATTCAGCTTATTTTGATCCCCGGCTTGAGGTGGTTGAGTCCTTCCCTACGCCAGATGGATTTCTACCGTTCGGCAGTGTTCGCATCTTTGCAATATTGCCATTTCACGTACGAAAAGGAGACATATTTTGCAATTTCAGATCAGATAACACCTATGTAGCGCAACATCAAGCAGACCGGGTTGAAGCGGTTCA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6236#1 CCGCGGACGCGTGGGTGCGTTCGGATCGTGAATGTTAGTTGCGATACACAG-TATTAAAT 59
consensus_6236#2 CCGCGGACGCGTGGG-----------CGTGAATGTTAGTTGCGATACACAG-TATTAAAT 48
consensus_6236#0 ATGCNGAGGCAGAATC----CCCGAGGTTAAATGT-AGTTGCGATACACAGCTATTAAAT 55
** ** ** * ***** *************** ********
consensus_6236#1 GCGACCCAAAATGGTTCGAGAAATATCGTACGTTTCCATCAAATCTCGTTCTAAACCAGT 119
consensus_6236#2 GCGACCCAAAATGGTTCGAGAAATATCGTACGTTTCCATCAGATCTCGTTCTAAACCAGT 108
consensus_6236#0 GCGACC-AAAATGGTTCGAGAAATATCGTACGTTTCCATCAAATCTCGTTCTAAACCAGT 114
****** ********************************** ******************
consensus_6236#1 GATTTTTGTGCACTCGTTAGTATCAAATCGATTTACGCGAA-AATATGGCGTATTGTCCC 178
consensus_6236#2 GATTTTTGTGCACTCGTTAGTATCAAATCGATTTACGCGAA-AATATGGCGTATTGTCCC 167
consensus_6236#0 GATTTTNGTGCACTCGTTAGTATCAAATCGATTTACGCGAACAATATGGCGTATTGTCCC 174
****** ********************************** ******************
consensus_6236#1 TAATTCTGTTGACAGCCCTCGGGCTGCTTTATTACCGACGAGTTTTGTTTCAAAAGTACA 238
consensus_6236#2 TAATTCTGTTGACAGCCCTCGGGCTGCTTTATTACCGACGAGTTTTGTTTCAAAAGTACA 227
consensus_6236#0 TAATTCTGTTGACAGCC-TCGGGCTAGCTATTTATTT-TAACCCCGGAACCGGAAGGTTA 232
***************** ******* * *** * * * *** *
consensus_6236#1 TCCATCAAACACTACCACTGTA-TCAGC--GTTCCGTATCCTTAACGTTTGGAAATGAAA 295
consensus_6236#2 TCCATCAAACACTACCACTGTA-TCAGC--GTTCCGTATCCTTAACGTTTGGAAATGAAA 284
consensus_6236#0 TNTGGTTATGTCNAACACCACGGTTAACCAATTCCCAATTCCAAAAAACCCAACNTAAAA 292
* * * * *** * * * **** ** * ** * * ***
consensus_6236#1 GCTGGTTACAAGGTGAAGATACAGGAGAACGTGATCACTGGCTACCGATTGGTGAACCGA 355
consensus_6236#2 GCTGGTTACAAGGTGAAGATACAGGAGAACGTGATCACTGGCTACCGATTGGTGAACCGA 344
consensus_6236#0 CCAACTT---GGGTTTAATTTCCCCAGGCCGGGTTTTCCCCCGGTTGAATTCCCTTTTTA 349
* ** *** * * * ** ** * * * * ** * *
consensus_6236#1 AAAAAAGGTTTAAAATATATTCA-GCTTATTTTGATCCCCGGCTTGAGGTGGTT---GAG 411
consensus_6236#2 AAAAAAGGTTTAAAATATATTCA-GCTTATTTTGATCCCCGGCTTGAGGTGGTT---GAG 400
consensus_6236#0 AAACCGGGTTTTCTGGGGGACCACACACACTTTTGGGACAAACACAAGGCGCTTTGGGGG 409
*** ***** ** * * *** * * *** * ** * *
consensus_6236#1 TCCTTCC-CTACGCCAGATGGATTTCTACCGTTCGG-CAGTGTTCGCATCTTTGCAAT-- 467
consensus_6236#2 TCCTTCC-CTACGCCAGATGGATTTCTACCGTTCGG-CAGTGTTCGCATCTTTGCAAT-- 456
consensus_6236#0 TTTTTCAACCACACAAAGGGGTTGGGAAAAAAANGGACAATTTAACCAACNGGGAANCGA 469
* *** * ** * * ** * * ** ** * * ** * * *
consensus_6236#1 ---ATTGCCATTTCACGTACGAAAAGG-AGACATATTTTGCAATTTCAGA-----TCAGA 518
consensus_6236#2 ---ATTGCCATTTCACGTACGAAAAGG-AGACATATTTTGCAATTTCAGA-----TCAGA 507
consensus_6236#0 CAAACCNGGTTGTGACATTCCAACCGCTGGGTGAGCTTAACACCACCGGAACTTTTTGGG 529
* * * ** * * ** * * ** ** * ** * *
consensus_6236#1 TAACACCTATGTAGCGCAACATCAAGCAGACCGGGTTGAAGCGGTTCATGAGCATTGGAA 578
consensus_6236#2 TAACACCTATGTAGCGCAACATCAAGCAGACCGGGTTGAAGCGGTTCATGAGCATTGGAA 567
consensus_6236#0 GAGTTGGAGAAGACCCTGNCATTGAAAAAGACGANCCGCGGTGTGCTTCACAACGAACAN 589
* * * *** * * ** * * * *
consensus_6236#1 TATGGAATTTGCCGCCAGTTATGTGATATGCAAACTTGCCGGAAATATTACTAAACGCGA 638
consensus_6236#2 TATGGAATTTGCCGCCAGTTATGTGATATGCAAACTTGCCGGAAATATTACT-------- 619
consensus_6236#0 CTTTTACTTTACCATTTTTTACACAACA-GCNCGTTT-TCAAAATTGTCCTTTCTTGGAA 647
* * *** ** *** * * ** ** * ** * * *
consensus_6236#1 AGCCCGCCTACCGGACGAGGTAGCTTT--------------------------------- 665
consensus_6236#2 ------------------------------------------------------------
consensus_6236#0 TTCACCCCCCCCGGGGGAGCTTTTTGGNGCACAACGNGGGGGGATACATGCGAGGAAGAG 707
consensus_6236#1 ------------------------------------------------------------
consensus_6236#2 ------------------------------------------------------------
consensus_6236#0 GCATNATTATGAGGGGAGATTGTTGCAGAAAAAGGGGTTACATATTATTCACCGAGAGGA 767
consensus_6236#1 --------------------------------
consensus_6236#2 --------------------------------
consensus_6236#0 TAATGGGGATTTAGGGTTGNGAGGACNGCACT 799
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||