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Anopheles gambiae
cluster # 6280 cluster # 6280       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6280#0 length = 1927 sequences # 5  

consensusID : consensus_6280#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1927
fasta sequence
                              [CAATCGCACGACGTCCTCCACTTATTGGAAAATTGTGTACTAAAACACAAAAGAAATGTTATTCCTTAAAGTATCCAGGAGTGCAGTTACCTCCTGCCTGCGGTCACGCGCCCTCTCTACCGGCAGATTCAATTGGGCAGCCATCAAAACGGTACAGGAAAAGGTTGATCCGTACACGAAAATACACATTAATTGTGCGTACGAGCTGAAAATCGTTCCCTACGATCTGCTGGACTGTCCGGACTCAAACCTCCTGAAGGCAACGGTCAAGCAGGGCAGCAATGTGGACAGCTTGGCAGTGAAAATCACCGATAAAACTGTCACCATCACGAGCGACCCGAGCGCCGGTGGGTGCGAATGTATCTTGGAGGTGCTTATCAAGGCGGACCTGCAGATCCGCAACGACGGTAGCACCACCATCGCAAACCTGTACAGCGACGAAATCGACGTCGTTGGCACTGGCAATATAGAGACACGCAGCCTTCGTTCCACAAACATCCAGCTCTGCAGCACTGCCGGCAATATTGCCTGCCAGGGGATCACGCTGGCGGAAAATGTAACGGCCACGACGGTGGGCAAGGGAAACATATTTCTGGACAAACTGCAGGGAGGATCGGTGAGTGCGACTACCGAGGCGGGCAACATTTCGGTCAATGCAAGCTACTCGAACCGAAGCACGTTCCAGACGCGGGACGGTGATATGGAGCTGAAAAGCATACACAAGGATTGTACCGTTCGATCGAACGGTGGCAAAAGTCTCACCATGAAGGGCTTCTACGGTACACTAAACGCAGACGTTGGGGAGCGAAAACGTAACACTGCAACTATCGGAAATGGTCGGTACAAGCAATATCAAAGCAATGGCCACCAAAACGTTGCATTTAAATCTTGCCGAAACTGTGTACGAAACGTCATCGATCAAGGTAAAATCCACCCAGCTTACGCTCGACAGCTCGATGGATGACAAGGAACATCGACGAGACGGCAACAGTGCCGTGCTGGGCAAAGCCGAGGCAGAAAATGCATTACACGTCGAAACGAACGGGTCGGTGGTGGTGCGAAAAATGTCCTGGGCCGATAGCTTTTCCTTCAGCGGCATGAGTCAGATGGAGCAGCAGTAAAAAATCTGCATCGACATGCGCAACGTGTGTCCATTCTCAGGGCAGCATTTGAATGATGGTAGACTTTAGTATATTTTAAATAACGCTGATACCTTCCTTCGACCTAGCGTTTGATGTTTTCTTTCTCAAGAGAGAAATATCCACTCAGTCATTAAAATAGCATACAGATATTTATGTACCAGATACGAAAGCATCACTCAGAATAAACATAGTGTTCCCCAGTTGCAACACCCATAACTGGCATTTTCCGGAGATGCTTTCCTTGCGTTCCTTGCTATTTAAAAATGTAACAATCTGTAATTATGCCAAATTACAGGGCGATTATATTCACTTGCAAAACAAACCTTATACCCTACCTCACATGCAGCTTAACAGACACTGCAATTACTCTAACGACCAAACAACTT-CCCCCCTATGCACTGTCCCGACATACACACACTCTCACCAGTATCGTGGCAAACCAGTCGGGTGAAAGAAATCCTCCCCGCACAGATCGGTACTACACTCAAACGCACCAGCCCGGCCACATTTGCATACGTTGCAGTGGCGGCGAAACACTCTTCCTTGCGGGCACGGGAAACTTCCGTTGCCTTGCTGCCGTTCGATCGCATCCAGCAGGTCAAGGTCGTAGGAACAGATGCGCTGCGTTGAGTTTCCGATTGCCAAACAGTTGATGAAGCTCTCGCCGGCTCCCATCGTGCGCCGGTAACGACCGCGTGGAGCTGCGCTCCTACTGCTGACGGTGAAGGAGAGCAACACAATTCCCACAATAATTGCTGCGAACTTCATCGCGTGAATGGTTGCGG]

[+] EMBL CNS08MM6             [CAATCGCACGACGTCCTCCACTTATTGGAAAATTGTGTACTAAAACACAAAAGAAATGTTATTCCTTAAAGTATCCAGGAGTGCAGTTACCTCCTGCCTGCGGTCACGCGCCCTCTCTACCGGCAGATTCAATTGGGCAGCCATCAAAACGGTACAGGAAAAGGTTGATCCGTACACGAAAATACACATTAATTGTGCGTACGAGCTGAAAATCGTTCCCTACGATCTGCTGGACTGTCCGGACTCAAACCTCCTGAAGGCAACGGTCAAGCAGGGCAGCAATGTGGACAGCTTGGCAGTGAAAATCACCGATAAAACTGTCACCATCACGAGCGACCCGAGCGCCGGTGGGTGCGAATGTATCTTGGAGGTGCTTATCAAGGCGGACCTGCAGATCCGCAACGACGGTAGCACCACCATCGCAAACCTGTACAGCGACGAAATCGACGTCGTTGGCACTGGCAATATAGAGACACGCAGCCTTCGTTCCACAAACATCCAGCTCTGCAGCACTGCCGGCAATATTGCCTGCCAGGGGATCACGCTGGCGGAAAATGTAACGGCCACGACGGTGGGCAAGGGAAACATATTTCTGGACAAACTGCAGGGAGGATCGGTGAGTGCGACTACCGAGGCGGGCAACATTTCGGTCAATGCAAGCTACTCGAACCGAAGCACGTTCCAGACGCGGGACGGTGATATGGAGCTGAAAAGCATACACAAGGATTGTACCGTTCGATCGAACGGTGGCAAAAGTCTCACCATGAAGGGCTTCTACGGTACACTAAACGCAGACGTTGGGGAGCGAAAACGTAACACTGCAACTATCGGAAATGGTCGGTACAAGCAATATCAAAGCAATGGCCACCAAAACGTTGCATTTAAATCTTGCCGAAACTGTGTACGAAACGTCATCGATCAAGGTAAAATCCACCCAGCTTACGCTCGACAGCTCGATGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AL692726             [                                                                                                                                                                                                          ccgaggttAATCGTT CCTACGATCTGCTGGACTGTCCGGACTCAAACCTCCTGAAGGCAACGGTCAAGCAGGGCAGCAATGTGGACAGCTTGGCAGTGAAAATCACCGACAAAACTGTCACCATCACGAGCGACCCGAGCGCCGGTGGGTGCGAATGTATCTTGGAGGTGCCGATCAAGGCGGACCTGCAAATCCGCAACGACGGTAGCACCACCATCGCAAACCTGTACAGCGACGAAATCGACGTCGTTGGCACTGGCAATATAGAGACACGCAGCCTTCGTTCCACAAACATCCAGCTCTGCAGCACTGCCGGCAATATTGCCTGTCAGGGGATCACGCTGGCGGAAAATGTAACGGCCACGACGGTGGGCAAGGGAAACATATTCCTGGACAAACTGCAGGGAGGATCGGTTAGTGCGACTACCGAGGCGGGCAACATTTCAGTCAATGCAAGCTACTCGAACCGAAGCACGTTCCAGACGCGGGACGGTGACATGGAGCTGAAAAGCATACACAAGGATTGTACTGTTCGATCGAACGGTGGCAAAAGTCTCACCATGAAGGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS08MM7             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TATAGAGACACGCAGCCTTCG TCCACAAACATCCAGCTCTGCAGAACTGCCGGCAATATTGCCTGCCAGGGGATCACGCTGGCGGAAAATGTAACGGCCACGACGGTGGGCAAGGGAAACATATTTCTGGACAAACTGCAGGGAGGATCGGTGAGTGCGACTACCGAGGCGGGCAACATTTCGGTCAATGCAAGCTACTCGAACCGAAGCACGTTCCAGACGCGGGACGGTGATATGGAGCTGAAAAGCATACACAAGGATTGTACCGTTCGATCGAACGGTGGCAAAAGTCTCACCATGAAGGGCTTCTACGGTACACTAAACGCAGACGTT GGGAGCGAAAACGTAACACTGCAACTATCGGAAATGGTCGGTACAAGCAATATCAAAGCAATGGCCACCAAAACGTTGCATTTAAATCTTGCCGAAACTGTGTACGAAACGTCATCGATCAAGGTAAAATCCACCCAG TTACGCTCGACAGCTCGATGAATGACAAGGAACATCGACGAGACGGCAACAGTGCCGTGCTGGGCAAAGCCGAGGCAGAAAATGCATTACACGTCGAAACGAACGGGTCGGTGGTGGTGCGAAAAATGTCCTGGGCCGATAGCTTTTCCTTCAGCGGCATGAGTCAGATGGAGCAGCAGTAAAAAATCTGCATCGACATGCGCAACGTGTGTCCATTCTCAGGGCAGCATTTGAATGATGGTAGACTTTAGTATATTTTAAATAACGCTGATACCTTCCTTCGACCTAGCGTTTGATGTTTTCTTTCTCAAGAGAGAAATATCCACTCAGTCATTAAAATAGCATACAGATATTTATGTACCAGATACGAAAGCATCACTCAGAATAAACATAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL BX626751             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCTTCAGCGGCATGGNTCAGATGGAGCAGCAGTAAAAAATCTGCATCGACATACGCAACGTGTGTCCATTCTCAGGGCAGCATTTCAATGATGGTAGGCTTCAGTATATTTTAAATAAC   GATAACTTCCTTTGACCTAGCGGTTGATGCTTTCTTTCTCAAGAGAGAAATATCCACTCAGTCATTAAAGTAGCATACAGATATTTATGTACCAGATACGAAAGCATCACTCAGAATAAACATAGTGTTCCCCAGTTGCAACACCCATAACTGGCATTTTCCGGAGATGCTTTCCTTGCGTTCCTTGCTATTTAAAAATGTAACAATCTGTAATTATGCCAAATTACAGGGCGATTATATTCACTTGCAAAACAAACCTTATACCCTACCTCACATGCAGCTTAACAGACACTGCAATTACTCTAACGACCAAACAACTT CCCCCCTATGCACTGTCCCGACATACACACACTCTCACCAGTATCGTGGCAAACCAGTCGGGTGAAAGAAATCCTCCCCGCACAGATCGGTACTACACTCAAACGCACCAGCCCGGCCACATTTGCATACGTTGCAGTGGCGGCGAAACACTCTTCCTTGCGGGCACGGGAAACTTCCGTTGCCTTGCTGCCGTTCGATCGCATCCAGCAGGTCAAGGTCGTAGGAACAGATGCGCTGCGTTGAGTTTCCGATTGCCAAACAGTTGATGAAGCTCTCGCCGGCTCCCATCGTGCGCCGGTAACGACCGCGTGGAGCTGCGCTCCTACTGCTGACGGTGAAGGAGAGCAACACAATTCCCACAA                                    ]
[-] EMBL BM642968             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TACCTCACATGCAGCTTAACAGACACTGCAATTACTCTAACGACCAAACAAGTTCCCCCCCTATGCACTGTCCCGATATACACACACTCTCACCAGTATCGTGGCAAACCAGTCGGGTGAAAGAAATCCTCCCCGCACAGATCGGTACTACACTCAAACGCCCCAGCCCGATCACATTTGCATACGTTGCAGTGGCGGCGAAACACTTTTCCTTCCGGGCACGGACGACTTCCGTTGCCTTGCTGCCGTTCGATCGCATTCAGCAGGTCAAGGTCGTAGGAACAGATGCGCTGCGTTGAGTTTCCGATTGCCAAACAGTTGATGAAGCTCTCGCCGGCTCCCATCGTGCGCCGGTAACGACCGCGTGGAGCTACGCTCCTACTGCTGACGGTGAAGGAGAGCAACACAATTCCCACAGTAATTGCTGCGAACTTCATCGCGTGAATGGTTGCGG]


>consensus_6280#0 CAATCGCACGACGTCCTCCACTTATTGGAAAATTGTGTACTAAAACACAAAAGAAATGTT ATTCCTTAAAGTATCCAGGAGTGCAGTTACCTCCTGCCTGCGGTCACGCGCCCTCTCTAC CGGCAGATTCAATTGGGCAGCCATCAAAACGGTACAGGAAAAGGTTGATCCGTACACGAA AATACACATTAATTGTGCGTACGAGCTGAAAATCGTTCCCTACGATCTGCTGGACTGTCC GGACTCAAACCTCCTGAAGGCAACGGTCAAGCAGGGCAGCAATGTGGACAGCTTGGCAGT GAAAATCACCGATAAAACTGTCACCATCACGAGCGACCCGAGCGCCGGTGGGTGCGAATG TATCTTGGAGGTGCTTATCAAGGCGGACCTGCAGATCCGCAACGACGGTAGCACCACCAT CGCAAACCTGTACAGCGACGAAATCGACGTCGTTGGCACTGGCAATATAGAGACACGCAG CCTTCGTTCCACAAACATCCAGCTCTGCAGCACTGCCGGCAATATTGCCTGCCAGGGGAT CACGCTGGCGGAAAATGTAACGGCCACGACGGTGGGCAAGGGAAACATATTTCTGGACAA ACTGCAGGGAGGATCGGTGAGTGCGACTACCGAGGCGGGCAACATTTCGGTCAATGCAAG CTACTCGAACCGAAGCACGTTCCAGACGCGGGACGGTGATATGGAGCTGAAAAGCATACA CAAGGATTGTACCGTTCGATCGAACGGTGGCAAAAGTCTCACCATGAAGGGCTTCTACGG TACACTAAACGCAGACGTTGGGGAGCGAAAACGTAACACTGCAACTATCGGAAATGGTCG GTACAAGCAATATCAAAGCAATGGCCACCAAAACGTTGCATTTAAATCTTGCCGAAACTG TGTACGAAACGTCATCGATCAAGGTAAAATCCACCCAGCTTACGCTCGACAGCTCGATGG ATGACAAGGAACATCGACGAGACGGCAACAGTGCCGTGCTGGGCAAAGCCGAGGCAGAAA ATGCATTACACGTCGAAACGAACGGGTCGGTGGTGGTGCGAAAAATGTCCTGGGCCGATA GCTTTTCCTTCAGCGGCATGAGTCAGATGGAGCAGCAGTAAAAAATCTGCATCGACATGC GCAACGTGTGTCCATTCTCAGGGCAGCATTTGAATGATGGTAGACTTTAGTATATTTTAA ATAACGCTGATACCTTCCTTCGACCTAGCGTTTGATGTTTTCTTTCTCAAGAGAGAAATA TCCACTCAGTCATTAAAATAGCATACAGATATTTATGTACCAGATACGAAAGCATCACTC AGAATAAACATAGTGTTCCCCAGTTGCAACACCCATAACTGGCATTTTCCGGAGATGCTT TCCTTGCGTTCCTTGCTATTTAAAAATGTAACAATCTGTAATTATGCCAAATTACAGGGC GATTATATTCACTTGCAAAACAAACCTTATACCCTACCTCACATGCAGCTTAACAGACAC TGCAATTACTCTAACGACCAAACAACTTCCCCCCTATGCACTGTCCCGACATACACACAC TCTCACCAGTATCGTGGCAAACCAGTCGGGTGAAAGAAATCCTCCCCGCACAGATCGGTA CTACACTCAAACGCACCAGCCCGGCCACATTTGCATACGTTGCAGTGGCGGCGAAACACT CTTCCTTGCGGGCACGGGAAACTTCCGTTGCCTTGCTGCCGTTCGATCGCATCCAGCAGG TCAAGGTCGTAGGAACAGATGCGCTGCGTTGAGTTTCCGATTGCCAAACAGTTGATGAAG CTCTCGCCGGCTCCCATCGTGCGCCGGTAACGACCGCGTGGAGCTGCGCTCCTACTGCTG ACGGTGAAGGAGAGCAACACAATTCCCACAATAATTGCTGCGAACTTCATCGCGTGAATG GTTGCGG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)