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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6321#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1413 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGTGATAAGCGTGATTACGGGAGTCAGAAGTGCGAATCAATCGTTTCCCCACGCGAAACAGTGCCACTGCTGCAGGAATATCGAAATAACTGGCTCGTGCTAGAGTGAAGCGAAAAAGAAGCGAAAGTGATACGAAACCGAAGTGAGTGTGAATTTATTCTCGAAAAAAGCGAAACGTCGAAATCGAAAGCAGCGCACACACGCACTCGGGCCCGCACTGATAAGCGTGTGCGGTGAATCTTTTGCAGAGTGTGTAACAAATTTACCTTCCCCCGCGGTGCGCACCAGCTTCCGTGTCCGATTGTTTCCGCCAGGTGAAGAAGCAAAAAAGCAGCAGCAGCAACCGCAAACGCAATGTGTGCGAACGTGTCGTGTGTTGTGCGCGCTGCCAGCATGATGTCACAGTGTGCTACGCTGTGCAGTGCCCCACGGATGCCACCGCGGCTTAGTCACCGGATAGGTGGGATGGCTGGTGCTTCCATATCCTTCCACAGCACGGCC------CAGCAGCAGCAGCACCGGGCCACCCAACACCTGCCAGCGCGAGTCGCCGCCCGAACTGGATACAACCACCACCTCCAACGGCAGCCCGTGATGGCGCGGGCGTACTTCTTTCCGGGAGGTGGCCCGGTGCGGTCCTACACCCAGGCCGCCTCGACCCTCACCCGGGAGCAGCTGCACGATCTGGTGTACAGGTTAAACGAAGATGAAAGAGAATTGCTCATGAACACGCTCAAGCAATTCGAATCCAACAAAGTGAAGGCAAAGTTTGAAGGGCAGTTGGCAGCAACCGTTTGGCGAAGTAGATTCGGCCGTCCAGCAAAGCTAAAGCCGGTCCTGGGTGATGTAGATCCGACCGGTTCCTACTGCGCGGTGCCGGAAGATTGGCTGCAAAAGAAGTTCGCCGAAACAGTGCCAGTACCACCGACTTCGGACCTCATGAAACTTGGATTGGTGAACGCCCTCCCATTCATTGGATTTGGTTTCCTTGACAACTTTACCATGATCATTGCGGGCGATTACATCGAGCACACGCTCGGGCTGTTCATGTGCATATCGACGATGGCGGCGGCAGCACTGGGGAACACCATCAGCGACGTAATCGGCATCGGGTCCGCCTTCTACGTGGAGAAGCTGGCCGAAATGAGTGGCGTGAAGCCGCCGAAGATGTCGCCGATCCAGCTGGAGATGAAAGCCAGCCGAAGGGCGGCCAATTTGGGACGAGTGCTGGGTATTACCATCGGATGTCTGCTGGGAATGTGCCCTCTATTATTCATGAAGGAGGATAAGGAGAAGGAAAAGGACAAGGATAAGAACAAGCCGTCGGAAGCAAGTGCGACTGATGCTGCTGCTGCTGCTGCGGATGGTGTTGCGAACATTGTTGCCGTGAA]
[+] EMBL BM605292 [CCGCCCACGCGTCCGCCCACGCGTCCGTGATAAGCGTGATTACGGGAGTCAGAAGTGCGAATCAATCGTTTCCCCACGCGAAACAGTGCCACTGCTGCAGGAATATCGAAATAACTGGCTCGTGCTAGAGTGAAGCGAAAAAGAAGCGAAAGTGATACGAAACCGAAGTGAGTGTGAATTTATTCTCGAAAAAAGCGAAACGTCGAAATCGAAAGCAGCGCACACACGCACTCGGGCCCGCACTGATAAGCGTGTGCGGTGAATCTTTTGCAGAGTGTGTAACAAATTTACCTTCCCCCGCGGTGCGCACCAGCTTCCGTGTCCGATTGTTTCCGCCAGGTGAAGAAGCAAAAAAGCAGCAGCAGCAACCGCAAACGCAATGTGTGCGAACGTGTCGTGTGTTGTGCGCGCTGCCAGCATGATGTCACAGTGTGCTACGCTGTGCAGTGCCCCACGGATGCCACCGCGGCTTAGTCACCGGATAGGTGGGATGGCTGGTGCTTCCATATCCTTCCACAGCACGGCC CAGCAGCAGCAGCACCGGGCCACCCAACACCTGCCAGCGCGAGTCGCCGCCCGAACTGGATACA ]
[+] EMBL BM612427 [ ccgGTGATTACGGGAGTCAGAAGTGCGAATCAATCGTTTCCCCACGCGAAACAGTGCCACTGCTGCAGGAATATCGAAATAACTGGCTCGTGCTAGAGTGAAGCGAAAAAGAAGCGAAAGTGATACGAAACCGAAGTGAGTGTGAATTTATTCACGAAAAAAGCGAAACGTCGAAATCGAAAGCAGCGCACACACGCACTCGGGCCCGCACTGATAAGCGTGTGCGGTGAATCTTTTGCAGAGTGTGTAACAAATTTACCTTCCCCCGCGGTGCGCACCAGCTTCCGTGTCCGATTGTTTCCGCCAGGTGAAGAAGCAAAAAAGCAGCAGCAGCAACCGCAAACGCAATGTGTGCGAACGTGTCGTGTGTTGTGCGCGCTGCCAGCATGATGTCACAGTGTGCTACGCTGTGCAGTGCCCCACGGATGCCACCGCGGCTTAGTCACCGGATAGGTGGGATGGCTGGTGCTTCCATATCCTTCCACAGCACGGCCCAGCAGCAGCAGCAGCAGCACCGGGTCACCCAACACCAGCCAGCGCGAGTCGTCGCCCGAACTGGATACAACCACCACCTCCAACGGCAGCCCGTGATGGCGCGGGCGTACTTCTTTCCGGGAGGTGGCCCGGTGCGGTCCTACACCCAGGCCGCCTCGACCCTCACCCGGGAGCAGCTGCACGATCTG ]
[+] EMBL BX622851 [ ACTTCTTTCCGGGAGGTGGCCCGGTGCGGTCCTACACCCAGGCCGCCTCGACCCTCACCCGGGAGCAGCTGCACGATCTGGTGTACAGGTTAAACGAAGATGAAAGAGAATTGCTCATGAACACGCTCAAGCAATTCGAATCCAACAAAGTGAAGGCAAAGTTTGAAGGGCAGTTGGCAGCAACCGTTTGGCGAAGTAGATTCGGCCGTCCAGCAAAGCTAAAGCCGGTCCTGGGTGATGTAGATCCGACCGGTTCCTACTGCGCGGTGCCGGAAGATTGGCTGCAAAAGAAGTTCGCCGAAACAGTGCCAGTACCACCGACTTCGGACCTCATGAAACTTGGATTGGTGAACGCCCTCCCATTCATTGGATTTGGTTTCCTTGACAACTTTACCATGATCATTGCGGGCGATTACATCGAGCACACGCTCGGGCTGTTCATGTGCATATCGACGATGGCGGCGGCAGCACTGGGGAACACCATCAGCGACGTAATCGGCATCGGGTCCGCCTTCTACGTGGAGAAGCTGGCCGAAATGAGTGGCGTGAAGCCGCCGAAGATGTCGCCGATCCAGCTGGAGATGAAAGCCAGCCGAAGGGCGGCCAATTTGGGACGAGTGCTGGGTATTACCATCGGATGTCTGCTGGGAATGTGCCCTCTAT ]
[+] EMBL BX621992 [ GCAGTTGGCAGCAACCGTTTGGCGAAGTAGATTCGGCCGTCCAGCAAAGCTAAAGCCGGTCCTGGGTGATGTAGATCCGACCGGTTCCTACTGCGCGGTGCCGGAAGATTGGCTGCAAAAGAAGTTCGCCGAAACAGTGCCAGTACCACCGACTTCGGACCTCATGAAACTTGGATTGGTGAACGCCCTCCCATTCATTGGATTTGGTTTCCTTGACAACTTTACCATGATCATTGCGGGCGATTACATCGAGCACACGCTCGGGCTGTTCATGTGCATATCGACGATGGCGGCGGCAGCACTGGGGAACACCATCAGCGACGTAATCGGCATCGGGTCCGCCTTCTACGTGGAGAAGCTGGCCGAAATGAGTGGCGTGAAGCCGCCGAAGATGTCGCCGATCCAGCTGGAGATGAAAGCCAGCCGAAGGGCGGCCAATTTGGGACGAGTGCTGGGTATTACCATCGGATGTCTGCTGGGAATGTGCCCTCTATTATTCATGAAGGAGGATAAGGAGAAGGAAAAGGACAAGGATAAGAACAAGCCGTCGGAAGCAAGTGCGACTGATGCTGCTGCTGCTGCTGCGGATGGTGTTGCGAACATTGTTGCCGTGAA]
consensusID : consensus_6321#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 649 fasta sequence
[CCGAGCGCACGCACGCCAGTTCCGCTGCAGTTTTCGGGGGGTGATAAGCGTGATTACGGGAGTCAGAAGTGCGAATCAATCGTTTCCCCACGCGAAACAGTGCCACTGCTGCAGGGATATCGAAATACCTGGCTCGTGCTAGAGTGAAGCGAAAAAGAAGCGAAAGTGATACGAAACCGAAGTGAGTGTGAATTTATTCACGAAAAGCGAAACGTCGAAATCGAAAGCAGCAGCACACACGCACTCGGGCCCGCACTGATAAGCGTGTGCGGTGAATCTTTGGCAGAGTGTGTAACAAATTTACCTTCCCCCGCGGTGCGCACCAGCTTCCGTGTCCGATTGTTTCCGCCAGGTGGAGAAGCAAAAAAGCAGCAGCAGCAACCGCAAACGGAATGTGTGCGAACGTGTCGTGTGTTGTGCGCGCTGCCAGCATGATGTCACAGTGTGCTACGCTGTGCAGTGCCCCACGGATGCCACCGCGGCTTAGTCACCGGATAGGTGGGATGGCTGGTGCTTCCATATCCTTCCACAGCACGGCCCAGCAGCAGCAGCACCGGATCACCCAACACCAGCCAGCGCGAGTCGCCGCCCGAAATGGATACAACCACCACCTCCAACGGCAGCCCGTCATGGCGCGGGCGTACTTCTT]
[+] EMBL BM586300 [CCGAGCGCACGCACGCCAGTTCCGCTGCAGTTTTCGGGGGGTGATAAGCGTGATTACGGGAGTCAGAAGTGCGAATCAATCGTTTCCCCACGCGAAACAGTGCCACTGCTGCAGGGATATCGAAATACCTGGCTCGTGCTAGAGTGAAGCGAAAAAGAAGCGAAAGTGATACGAAACCGAAGTGAGTGTGAATTTATTCACGAAAAGCGAAACGTCGAAATCGAAAGCAGCAGCACACACGCACTCGGGCCCGCACTGATAAGCGTGTGCGGTGAATCTTTGGCAGAGTGTGTAACAAATTTACCTTCCCCCGCGGTGCGCACCAGCTTCCGTGTCCGATTGTTTCCGCCAGGTGGAGAAGCAAAAAAGCAGCAGCAGCAACCGCAAACGGAATGTGTGCGAACGTGTCGTGTGTTGTGCGCGCTGCCAGCATGATGTCACAGTGTGCTACGCTGTGCAGTGCCCCACGGATGCCACCGCGGCTTAGTCACCGGATAGGTGGGATGGCTGGTGCTTCCATATCCTTCCACAGCACGGCCCAGCAGCAGCAGCACCGGATCACCCAACACCAGCCAGCGCGAGTCGCCGCCCGAAATGGATACAACCACCACCTCCAACGGCAGCCCGTCATGGCGCGGGCGTACTTCTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6321#0 ---------------CCGCCCACGCGTCCGCCCACGCGTCCGTGATAAGCGTGATTACGG 45
consensus_6321#1 CCGAGCGCACGCACGCCAGTTCCGCTGCAGTTTTCG-GGGGGTGATAAGCGTGATTACGG 59
** *** * * ** * *******************
consensus_6321#0 GAGTCAGAAGTGCGAATCAATCGTTTCCCCACGCGAAACAGTGCCACTGCTGCAGGAATA 105
consensus_6321#1 GAGTCAGAAGTGCGAATCAATCGTTTCCCCACGCGAAACAGTGCCACTGCTGCAGGGATA 119
******************************************************** ***
consensus_6321#0 TCGAAATAACTGGCTCGTGCTAGAGTGAAGCGAAAAAGAAGCGAAAGTGATACGAAACCG 165
consensus_6321#1 TCGAAATACCTGGCTCGTGCTAGAGTGAAGCGAAAAAGAAGCGAAAGTGATACGAAACCG 179
******** ***************************************************
consensus_6321#0 AAGTGAGTGTGAATTTATTCTCGAAAAAAGCGAAACGTCGAAATCGAAAGCAGC-GCACA 224
consensus_6321#1 AAGTGAGTGTGAATTTATTCACGAAAA--GCGAAACGTCGAAATCGAAAGCAGCAGCACA 237
******************** ****** ************************* *****
consensus_6321#0 CACGCACTCGGGCCCGCACTGATAAGCGTGTGCGGTGAATCTTTTGCAGAGTGTGTAACA 284
consensus_6321#1 CACGCACTCGGGCCCGCACTGATAAGCGTGTGCGGTGAATCTTTGGCAGAGTGTGTAACA 297
******************************************** ***************
consensus_6321#0 AATTTACCTTCCCCCGCGGTGCGCACCAGCTTCCGTGTCCGATTGTTTCCGCCAGGTGAA 344
consensus_6321#1 AATTTACCTTCCCCCGCGGTGCGCACCAGCTTCCGTGTCCGATTGTTTCCGCCAGGTGGA 357
********************************************************** *
consensus_6321#0 GAAGCAAAAAAGCAGCAGCAGCAACCGCAAACGCAATGTGTGCGAACGTGTCGTGTGTTG 404
consensus_6321#1 GAAGCAAAAAAGCAGCAGCAGCAACCGCAAACGGAATGTGTGCGAACGTGTCGTGTGTTG 417
********************************* **************************
consensus_6321#0 TGCGCGCTGCCAGCATGATGTCACAGTGTGCTACGCTGTGCAGTGCCCCACGGATGCCAC 464
consensus_6321#1 TGCGCGCTGCCAGCATGATGTCACAGTGTGCTACGCTGTGCAGTGCCCCACGGATGCCAC 477
************************************************************
consensus_6321#0 CGCGGCTTAGTCACCGGATAGGTGGGATGGCTGGTGCTTCCATATCCTTCCACAGCACGG 524
consensus_6321#1 CGCGGCTTAGTCACCGGATAGGTGGGATGGCTGGTGCTTCCATATCCTTCCACAGCACGG 537
************************************************************
consensus_6321#0 CCCAGCAGCAGCAGCACCGGGCCACCCAACACCTGCCAGCGCGAGTCGCCGCCCGAACTG 584
consensus_6321#1 CCCAGCAGCAGCAGCACCGGATCACCCAACACCAGCCAGCGCGAGTCGCCGCCCGAAATG 597
******************** *********** *********************** **
consensus_6321#0 GATACAACCACCACCTCCAACGGCAGCCCGTGATGGCGCGGGCGTACTTCTTTCCGGGAG 644
consensus_6321#1 GATACAACCACCACCTCCAACGGCAGCCCGTCATGGCGCGGGCGTACTTCTT-------- 649
******************************* ********************
consensus_6321#0 GTGGCCCGGTGCGGTCCTACACCCAGGCCGCCTCGACCCTCACCCGGGAGCAGCTGCACG 704
consensus_6321#1 ------------------------------------------------------------
consensus_6321#0 ATCTGGTGTACAGGTTAAACGAAGATGAAAGAGAATTGCTCATGAACACGCTCAAGCAAT 764
consensus_6321#1 ------------------------------------------------------------
consensus_6321#0 TCGAATCCAACAAAGTGAAGGCAAAGTTTGAAGGGCAGTTGGCAGCAACCGTTTGGCGAA 824
consensus_6321#1 ------------------------------------------------------------
consensus_6321#0 GTAGATTCGGCCGTCCAGCAAAGCTAAAGCCGGTCCTGGGTGATGTAGATCCGACCGGTT 884
consensus_6321#1 ------------------------------------------------------------
consensus_6321#0 CCTACTGCGCGGTGCCGGAAGATTGGCTGCAAAAGAAGTTCGCCGAAACAGTGCCAGTAC 944
consensus_6321#1 ------------------------------------------------------------
consensus_6321#0 CACCGACTTCGGACCTCATGAAACTTGGATTGGTGAACGCCCTCCCATTCATTGGATTTG 1004
consensus_6321#1 ------------------------------------------------------------
consensus_6321#0 GTTTCCTTGACAACTTTACCATGATCATTGCGGGCGATTACATCGAGCACACGCTCGGGC 1064
consensus_6321#1 ------------------------------------------------------------
consensus_6321#0 TGTTCATGTGCATATCGACGATGGCGGCGGCAGCACTGGGGAACACCATCAGCGACGTAA 1124
consensus_6321#1 ------------------------------------------------------------
consensus_6321#0 TCGGCATCGGGTCCGCCTTCTACGTGGAGAAGCTGGCCGAAATGAGTGGCGTGAAGCCGC 1184
consensus_6321#1 ------------------------------------------------------------
consensus_6321#0 CGAAGATGTCGCCGATCCAGCTGGAGATGAAAGCCAGCCGAAGGGCGGCCAATTTGGGAC 1244
consensus_6321#1 ------------------------------------------------------------
consensus_6321#0 GAGTGCTGGGTATTACCATCGGATGTCTGCTGGGAATGTGCCCTCTATTATTCATGAAGG 1304
consensus_6321#1 ------------------------------------------------------------
consensus_6321#0 AGGATAAGGAGAAGGAAAAGGACAAGGATAAGAACAAGCCGTCGGAAGCAAGTGCGACTG 1364
consensus_6321#1 ------------------------------------------------------------
consensus_6321#0 ATGCTGCTGCTGCTGCTGCGGATGGTGTTGCGAACATTGTTGCCGTGAA 1413
consensus_6321#1 -------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||