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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6419#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1367 fasta sequence
[CACGGATGAGGGGGGAGACTGTGCTGAGCATGGCAACGCAAAGACCGACGACAAGGCAGAAGGCAAATCTCAACGTCCCACTGCAGCAACTGCCTTACAGGATGCGGATAGGGGCCAAATTCAGCAGCCGGCCGATGCTGACGTAATGGTGGCAGTACAGCAAGACACGGCCGAGCCGGAACAAGCTTCCTGCGTTCAAGCTACGGCCAGTTGCGCAGATCCATCTACCTCAGCGGATCCATTGCCAGCGGTGGACGGGAGCAAGCCCGCCCTGACACCGATGGAGATTCGCTACCAGGTGTACGAATCGGAACGCCAGATGCCCGCCATCATGGCGCTCATTCAGAAGGATCTGTCCGAGCCGTACTCGATCTACACCTACCGCTATTTCATACACAACTGGCCAAAGCTGTGCTTTCTGGCGCTGCACCGGGACACTTGCGTCGGTGCGATCGTCTGCAAGCTGGACATTCACCGGCAGGAGACGCGCCGCGGCTACATCGCAATGCTGGCAGTGGACAAGGACTATCGGAAGCTAAAAATCGGCACCACGCTCGTGCAGAAAGCAATACAGGCTATGGTGGAGGACCACGCCGATGAGGTGGTGTTGGAGACGGAAATCACGAACCAACCGGCACTGCGGTTGTACGAAAATCTGGGCTTTGTGCGAGACAAGCGGCTGTTTCACTACTACCTTAACGGTGTCGACGCGTTACGACTGAAGCTGTGGTTCAGATGAGCGCAGCTGTACCCCTACCAAACCTAGATGTCCTTTTGTTTCGTTTGTATCGAAGATAAGACGGAATGTCGCGATGCCCCAGGTAAC-AAGGCAACAGTCCTCAATAAACGCCGGCCAAGATTAGCGACGGGGACGGGGAAAGGGACCGTTGCCAATTTTGAATGTGTGCAAAAAGCTAGTGAATCAAAATGGCCAGCATGCTGAAGCCAGTACGAGCTGTAACGGATACTCATACGTTTTGTACTATGCTATGCGCTCGCAGTTGCGTGATATTTCAAATGGAATGGGCATTAATAGATATCAGCTAAATGTTTTGCAAACAAAACGTTTCTCCTGCCACCCATTTTCCTTGCACAACCAAATACTGAACCTAGACTGGAACAATATTTAATCGGTTTCCCCTGCCCCTCCGAGAGGAATTGAAATGGTTTAGGTCCTTATGAAGCGATCGAATGTAACACAAGGCAGCATAGGTCAATATTTATGGGAACAGTTCACTGTGCACGCGGTTGCTCATTGTTCTTGTGCACAGTTTTGTTTTTATGTTCCTCTTCACCCGAGCGTAACCATCATTAGAAGATTTTGGATTCTTGGTCAGCTTCAGGGTCCGCTTTCACACTGTATAACT]
[+] EMBL BX624658 [CACGGATGAGGGGGGAGACTGTGCTGAGCATGGCAACGCAAAGACCGACGACAAGGCAGAAGGCAAATCTCAACGTCCCACTGCAGCAACTGCCTTACAGGATGCGGATAGGGGCCAAATTCAGCAGCCGGCCGATGCTGACGTAATGGTGGCAGTACAGCAAGACACGGCCGAGCCGGAACAAGCTTCCTGCGTTCAAGCTACGGCCAGTTGCGCAGATCCATCTACCTCAGCGGATCCATTGCCAGCGGTGGACGGGAGCAAGCCCGCCCTGACACCGATGGAGATTCGCTACCAGGTGTACGAATCGGAACGCCAGATGCCCGCCATCATGGCGCTCATTCAGAAGGATCTGTCCGAGCCGTACTCGATCTACACCTACCGCTATTTCATACACAACTGGCCAAAGCTGTGCTTTCTGGCGCTGCACCGGGACACTTGCGTCGGTGCGATCGTCTGCAAGCTGGACATTCACCGGCAGGAGACGCGCCGCGGCTACATTGCAATGCTGGCAGTGGACAAGGACTATCGGAAGCTAAAAATCGGCACCACGCTCGTGCAGAAAGCAATACAGGCTATGGTGGAGGACCACGCCGATGAGGTGGTGTTGGAGACGGAAATCACGAACCAACCGGCACTGCGGTTGTACGAAAATCTGGGCTTTGTGCGAGACAAGCGGCTGNTTCACTACTACCTTAACGGTGTCGACGCGTTACGACTGAAGCTGTGGNTCANATGAGCGCAGCTGTACCCCTACCAAA ]
[+] EMBL BX607714 [ GCAAGACACGGCCGAGCCGGAACAAGCTTCCTGCGTTCAAGCTACGGCCAGTTGCGCAGATCCATCTACCTCAGCGGATCCATTGCCAGCGGTGGACGGGAGCAAGCCCGCCCTGACACCGATGGAGATTCGCTACCAGGTGTACGAATCGGAACGCCAGATGCCCGCCATCATGGCGCTCATTCAGAAGGATCTGTCCGAGCCGTACTCGATCTACACCTACCGCTATTTCATACACAACTGGCCAAAGCTGTGCTTTCTGGCGCTGCACCGGGACACTTGCGTCGGTGCGATCGTCTGCAAGCTGGACATTCACCGGCAGGAGACGCGCCGCGGCTACATCGCAATGCTGGCAGTGGACAAGGACTATCGGAAGCTAAAAATCGGCACCACGCTCGTGCAGAAAGCAATACAGGCTATGGTGGAGGACCACGCCGATGAGGTGGTGTTGGAGACGGAAATCACGAACCAACCGGCACTGCGGTTGTACGAAAATCTGGGCTTTGTGCGAGACAAGCGGCTGTTTCACTACTACCTTAACGGTGTCGACGCGTTACGACTGAAGCTGTGGTTCAGATGAGCGCAGCTGTACCCCTACCAAACCTAGATGTCCTTTTGTTTCGTTTGTATCGAAGATAAGACGGAATGTCGCGATGCCCAAAGTAAC TAGGCAAC ]
[+] EMBL BM654999 [ ccgTGCGTCGGTGCGATCGTCTGCAAGCTGGACATTCACCGGCAGGAGACGCGCCGCGGCTACATCGCAATGCTGGCAGTGGACAAGGACTATCGGAAGCTAAAAATCGGCACCACGCTCGTGCAAAAAGCAATACAGGCTATGGTGGAGGACCACGCCGATGAGGTGGTGTTGGAGACGGAAATCACGAACCAACCGGCACTGCGGTTGTACGAAAATCTGGGCTTTGTGCGAGACAAGCGGCTGTTTCACTACTACCTTAACGGTGTCGACGCGTTACGACTGAAGCTGTGGTTCAGATGAGCGCAGCTGTACCCCTACCAAACCTAGATGTCCTTTTGTTTCGTTTGTATCGAAGATAAGACGGAATGTCGCGATGCCCCAGGTAACAAAGGCAACAGTCCTCAATAAACGCC ]
[+] EMBL BM581003 [ ccgGCGGCTGTTTCACTACTACCTTAACGGTGTCGACGCGTTACGACTGAAGCTGTGGTTCAGATGAGCGCAGCTGTACCCCTACCAAACCTAGATGTCCTTTTGTTTCGTTTGTATCGAAGATAAGACGGAATGTCGCGATGCCCCAGGTAACAAAGGCAACAGTCCTCAATAAACGCCGGCCAAGATTAGCGACGGGGACGGGGAAAGGGACCGTTGCCAATTTTGAATGTGTGCAAAAAGCTAGTGAATCAAAATGGCCAGCATGCTGAAGCCAGTACGAGCTGTAACGGATACTCATACGTTTTGTACTATGCTATGCGCTCGCAGTTGCGTGATATTTCAAATGGAATGGGCATTAATAGATATCAGCTAAATGTTTTGCAAACAAAACGTTTCTCCTGCCACCCATTTTCCTTGCACAACCAAATACTGAACCTAGACTGGAACAATATTTAATCGGTTTCCCCTGCCCCTCCGAGAGGAATTGAAATGGTTTAGGTCCTTATGAAGCGATCGAATGTAACACAAGGCAGCATAGGTCAATATTTATGGGAACAGTTCACTGTGCACGCGGTTGCTCATTGTTCTTGTGCACAGTTTTGTTTTTATGTTCCTCTTCACCCGAGCGTAACCATCATTAGAAGATTTTGGATTCTTGGTCAGCTTCAGGGTCCGCTTTCACACTGTATAACT]
consensusID : consensus_6419#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 463 fasta sequence
[ATCGCCGAGGTNGCGGCCAGATTAGCGACGGGGACGGGGAAAGGGACCGTTGCCAATTTTGAATGTGTGCAAAAAGCTAGTGAATCAAAATGGCCAGCATGCTGAAGCCAGTACGAGCTGTAACGGATACTCATACGTTTTGTACTATGCTATGCGCTCGCAGTTGCGTGATATTTCAAATGGAATGGGCATTAATAGATATCAGCTAAATGTTTTGCAAACAAAACGTTTCTCCTGCCACCCATTTTCCTTGCACAACCAAATACTGAACCTAGACTGGAACAATATTTAATCGGTTTCCCCTGGCCCCTCCGAGAGGAATTGAAATGGTTTAGGTCCTTATGAAGCGATCGAATGTAACACAAGGCAGCATAGGTCAATATTTATGGGAACAGTTCACTGTGCACGCGGTTGCTCATTGTTCTTGTGCTCTAGTTTTGTTTTTATGTTCCTCTTCACCCGA]
[+] EMBL AL931834 [ATCGCCGAGGTNGCGGCCAGATTAGCGACGGGGACGGGGAAAGGGACCGTTGCCAATTTTGAATGTGTGCAAAAAGCTAGTGAATCAAAATGGCCAGCATGCTGAAGCCAGTACGAGCTGTAACGGATACTCATACGTTTTGTACTATGCTATGCGCTCGCAGTTGCGTGATATTTCAAATGGAATGGGCATTAATAGATATCAGCTAAATGTTTTGCAAACAAAACGTTTCTCCTGCCACCCATTTTCCTTGCACAACCAAATACTGAACCTAGACTGGAACAATATTTAATCGGTTTCCCCTGGCCCCTCCGAGAGGAATTGAAATGGTTTAGGTCCTTATGAAGCGATCGAATGTAACACAAGGCAGCATAGGTCAATATTTATGGGAACAGTTCACTGTGCACGCGGTTGCTCATTGTTCTTGTGCTCTAGTTTTGTTTTTATGTTCCTCTTCACCCGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6419#0 CACGGATGAGGGGGGAGACTGTGCTGAGCATGGCAACGCAAAGACCGACGACAAGGCAGA 60
consensus_6419#1 ------------------------------------------------------------
consensus_6419#0 AGGCAAATCTCAACGTCCCACTGCAGCAACTGCCTTACAGGATGCGGATAGGGGCCAAAT 120
consensus_6419#1 ------------------------------------------------------------
consensus_6419#0 TCAGCAGCCGGCCGATGCTGACGTAATGGTGGCAGTACAGCAAGACACGGCCGAGCCGGA 180
consensus_6419#1 ------------------------------------------------------------
consensus_6419#0 ACAAGCTTCCTGCGTTCAAGCTACGGCCAGTTGCGCAGATCCATCTACCTCAGCGGATCC 240
consensus_6419#1 ------------------------------------------------------------
consensus_6419#0 ATTGCCAGCGGTGGACGGGAGCAAGCCCGCCCTGACACCGATGGAGATTCGCTACCAGGT 300
consensus_6419#1 ------------------------------------------------------------
consensus_6419#0 GTACGAATCGGAACGCCAGATGCCCGCCATCATGGCGCTCATTCAGAAGGATCTGTCCGA 360
consensus_6419#1 ------------------------------------------------------------
consensus_6419#0 GCCGTACTCGATCTACACCTACCGCTATTTCATACACAACTGGCCAAAGCTGTGCTTTCT 420
consensus_6419#1 ------------------------------------------------------------
consensus_6419#0 GGCGCTGCACCGGGACACTTGCGTCGGTGCGATCGTCTGCAAGCTGGACATTCACCGGCA 480
consensus_6419#1 ------------------------------------------------------------
consensus_6419#0 GGAGACGCGCCGCGGCTACATCGCAATGCTGGCAGTGGACAAGGACTATCGGAAGCTAAA 540
consensus_6419#1 ------------------------------------------------------------
consensus_6419#0 AATCGGCACCACGCTCGTGCAGAAAGCAATACAGGCTATGGTGGAGGACCACGCCGATGA 600
consensus_6419#1 ------------------------------------------------------------
consensus_6419#0 GGTGGTGTTGGAGACGGAAATCACGAACCAACCGGCACTGCGGTTGTACGAAAATCTGGG 660
consensus_6419#1 ------------------------------------------------------------
consensus_6419#0 CTTTGTGCGAGACAAGCGGCTGTTTCACTACTACCTTAACGGTGTCGACGCGTTACGACT 720
consensus_6419#1 ------------------------------------------------------------
consensus_6419#0 GAAGCTGTGGTTCAGATGAGCGCAGCTGTACCCCTACCAAACCTAGATGTCCTTTTGTTT 780
consensus_6419#1 ------------------------------------------------------------
consensus_6419#0 CGTTTGTATCGAAGATAAGACGGAATGTCGCGATGCCCCAGGTAACAAGGCAACAGTCCT 840
consensus_6419#1 -------------------------------------------------------ATCGC 5
**
consensus_6419#0 CAATAAACGCCGGCCAAGATTAGCGACGGGGACGGGGAAAGGGACCGTTGCCAATTTTGA 900
consensus_6419#1 CGA--GGTNGCGGCCA-GATTAGCGACGGGGACGGGGAAAGGGACCGTTGCCAATTTTGA 62
* * ****** *******************************************
consensus_6419#0 ATGTGTGCAAAAAGCTAGTGAATCAAAATGGCCAGCATGCTGAAGCCAGTACGAGCTGTA 960
consensus_6419#1 ATGTGTGCAAAAAGCTAGTGAATCAAAATGGCCAGCATGCTGAAGCCAGTACGAGCTGTA 122
************************************************************
consensus_6419#0 ACGGATACTCATACGTTTTGTACTATGCTATGCGCTCGCAGTTGCGTGATATTTCAAATG 1020
consensus_6419#1 ACGGATACTCATACGTTTTGTACTATGCTATGCGCTCGCAGTTGCGTGATATTTCAAATG 182
************************************************************
consensus_6419#0 GAATGGGCATTAATAGATATCAGCTAAATGTTTTGCAAACAAAACGTTTCTCCTGCCACC 1080
consensus_6419#1 GAATGGGCATTAATAGATATCAGCTAAATGTTTTGCAAACAAAACGTTTCTCCTGCCACC 242
************************************************************
consensus_6419#0 CATTTTCCTTGCACAACCAAATACTGAACCTAGACTGGAACAATATTTAATCGGTTTCCC 1140
consensus_6419#1 CATTTTCCTTGCACAACCAAATACTGAACCTAGACTGGAACAATATTTAATCGGTTTCCC 302
************************************************************
consensus_6419#0 CTG-CCCCTCCGAGAGGAATTGAAATGGTTTAGGTCCTTATGAAGCGATCGAATGTAACA 1199
consensus_6419#1 CTGGCCCCTCCGAGAGGAATTGAAATGGTTTAGGTCCTTATGAAGCGATCGAATGTAACA 362
*** ********************************************************
consensus_6419#0 CAAGGCAGCATAGGTCAATATTTATGGGAACAGTTCACTGTGCACGCGGTTGCTCATTGT 1259
consensus_6419#1 CAAGGCAGCATAGGTCAATATTTATGGGAACAGTTCACTGTGCACGCGGTTGCTCATTGT 422
************************************************************
consensus_6419#0 TCTTGTGCAC-AGTTTTGTTTTTATGTTCCTCTTCACCCGAGCGTAACCATCATTAGAAG 1318
consensus_6419#1 TCTTGTGCTCTAGTTTTGTTTTTATGTTCCTCTTCACCCGA------------------- 463
******** * ******************************
consensus_6419#0 ATTTTGGATTCTTGGTCAGCTTCAGGGTCCGCTTTCACACTGTATAACT 1367
consensus_6419#1 -------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||