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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6433#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 984 fasta sequence
[TGAACCGATAAAGATTGCACTCCGGGCGAATTGCGAACAGTATCAGCCGCCTCCGCTGAGACACAATCCGTACGACGATCAGGAGCTTGTCATACTGGCCGGTATCGTGATCGGGTGTTTCGGGCTGCTACTCATCATACTGGCGATAGTGCTGTGGAGGAAATGTTTCCACGCGTCGTACCACGAGGCCGGCGATCAGCGACCATCGGAACGGACCGACCATAAACCGACGGTCCAATCGAATGGGTGGAAAACGTCCTGCGATTCGAACGGTATCGTGCAAACGTCGATACCCTCCGAGGAGTACATCAACGGACAGCAGCAGGCGATGATCGATCGGTTCCATCGCTAGGCCCGAGATGACTGATTAATGGTAGGCAATGGTTGCTGCCGGTTGATGCGCACGTACTGCACGGTCACGAACTGAGCCCCGGTGTCTCTGTGCTTGCAGTAACTCGACGGACGGCCGGTGAGCCTCGCTGGCGGGGACGGTTGGTATGCCAACGAAAATCGGGGCGCACCTGGCTGTTACGTATGGAAAGTACCTGACTAGGATAATTTAACGTAAGTCGCTTTAGGAAATGGCCGATATCTAGTGAAACACATCGAAACAGACTTGTTGCGACAGGGATGATGGAGCGTACCGTTCTGCCGCCAATCGTTCCTTCCGATGTATTTTGTTAGTTTATTTTTTCGTTGTATTTAAACATTTTTCTTTCAAACAGTTTTGAATATAGTTTTTTGTTGTAAAAGGAGAAAAAATAATAGCCTTGCTATTGTGTGTGTGTGGGAATTCAATCCAACACAGGATCGAATAACTTGATTCTACGTTCACTATCATCGTTATGTTTGTGTCATTCTTTGATTAAGCTTTGCGTTAACGTTATCACTTGCATTCTCAAGATGCAGCTCAGCTTTTTCTTAACCACGGGTTGAGCAAAGCATTCAAACCGGGAAGGAATGCAAACATTTTGCTGGTGCTTA]
[+] EMBL BX617297 [TGAACCGATAAAGATTGCACTCCGGGCGAATTGCGAACAGTATCAGCCGCCTCCGCTGAGACACAATCCGTACGACGATCAGGAGCTTGTCATACTGGCCGGTATCGTGATCGGGTGTTTCGGGCTGCTACTCATCATACTGGCGATAGTGCTGTGGAGGAAATGTTTCCACGCGTCGTACCACGAGGCCGGCGATCAGCGACCATCGGAACGGACCGACCATAAACCGACGGTCCAATCGAATGGGTGGAAAACGTCCTGCGATTCGAACGGTATCGTGCAAACGTCGATACCCTCCGAGGAGTACATCAACGGACAGCAGCAGGCGATGATCGATCGGTTCCATCGCTAGGCCCGAGATGACTGATTAATGGTAGGCAATGGTTGCTGCCGGTTGATGCGCACGTACTGCACGGTCACGAACTGAGCCCCGGTGTCTCTGTGCTTGCAGTAACTCGACGGACGGCCGGTGAGCCTCGCTGGCGGGGACGGTTGGTATGCCAACGAAAATCGGGGCGCACCTGGCTGTTACGTATGGAAAGTACCTG ]
[+] EMBL BX617893 [ AATGGGTGGAAAACGTCCTGCGATTCGAACGGTATCGTGCAAACGTCGATACCCTCCGAGGAGTACATCAACGGACAGCAGCAGGCGATGATCGATCGGTTCCATCGCTAGGCCCGAGATGACTGATTAATGGTAGGCAATGGTTGCTGCCGGTTGATGCGCACGTACTGCACGGTCACGAACTGAGCCCCGGTGTCTCTGTGCTTGCAGTAACTCGACGGACGGCCGGTGAGCCTCGCTGGCGGGGACGGTTGGTATGCCAACGAAAATCGGGGCGCACCTGGCTGTTACGTATGGAAAGTACCTGACTAGGATAATTTAACGTAAGTCGCTTTAGGAAATGGCCGATATCTAGTGAAACACATCGAAACAGACTTGTTGCGACAGGGATGATGGAGCGTACCGTTCTGCCGCCAATCGTTCCTTCCGATGTATTTTGTTAGTTTATTTTTTCGTTGTATTTAAACATTTTTCTTTCAAACAGTTTTGAATATAGTTTTTTGTTGTAAAAGGAGAAAAAATAATAGCCTTGCTATTGTGTGTGTGTGGGAATTCAATCCAACACAGGATCGAATAACTTGATTCTACGTTCACTATCATCGTTATGTTTGTGTCATTCTTTGATTAAGCTTTGCGTTAACGTTATCACTTGCATTCTCAAGATGCAGCTCA ]
[+] EMBL BX608608 [ CGTCCTGCGATTCGAACGGTATCGTGCAAACTTTTATACCCTCCGAGGAGTACATCAACGGACAGCAGCAGGCGATGATCGATCGGTTCCATCGCTAGGCCCGAGATGACTGATTAATGGTAGGCAATGGTTGCTGCCGGTTGATGCGCACGTACTGCACGGTCACGAACTGAGCCCCGGTGTCTCTGTGCTTGCAGTAACTCGACGGACGGCCGGTGAGCCTCGCTGGCGGGGACGGTTGGTATGCCAACGAAAATCGGGGCGCACCAGGCTGTTACGTATGGAAAGTACCTGACTAGGATAATTTAACGTAAGTCGCTTTAGGAAATGGCCGATATCTAGTGAAACACATCGAGACAGACTTGTTGCGACAGGGATGATGGAGCGTACCGTTCTGCCGCCAATCGTTCCTTCCGATGTATTTTGTTATTATTTTGTTTCGTTGTATTTAAACATTTTTCTTTCAAACAGTTTGGAATATAGTTTTTTGTTGTAAAAGGAGAAAAAATAATAGCCTTGCTATTGTGTGTGTGTGGGAATTCAATCCAACACAGGCTCGAATAACTTGATTCTACGTTCACTATCATCATTATGTTTTTGTCATTCTGTGATTAAGCTTTGCGTTAACGTTATCACTTGCATTCTCAAGATACAGCTCAGCTTTTTCTTAACCACGGGTTGAGCAAAGCATTCAAACCGGGAAGGAATGCAAACATTTTGCTGGTGCTTA]
consensusID : consensus_6433#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 650 fasta sequence
[GAGTACGACGATACGCACGAGATACGCATCTCGGCCAATGCGTCCATCGTCGAGACGTCGATGGTTATTCCCAACCTGACGACGAACAGTGCGTACGAGGTGAAGGTTCGTGGGGCGACCGTAAGCACGGTGAATCCGAAAAAGGTTGTCCTCGGCACCTATTGTGAACCGATAAAGATTGCACTCCGGGCGAATTGCGAACAGTATCAGCCGCCTCCGCTGAGACACAATCCGTACGTCGATCAGGAGCTTGTCATACTGGCCGGTATCGTGATCGGGTGTTTCGGGCTGCTGCTCATCATACTGGCGATAGTGCTGTGGAGGAAATGTTTCCACGCGTCGTACCACGAGGCCGGCGATCAGCGACCATCGGAACGGACCGACCATAAACCGACGGTCCAATCGAATGGGTGGAAAACGTCCTGCGATTCGAACGGTATCGTGCAAACGTCGATACCCTCCGAGGAGTACATCAACGGACAGCAGCAGGCGATGATCGATCGGTTCCATCGCTAGGCCCGAGATGACTGATTAATGTAACTCGACGGACGGCCGGTGAGCCTCGCTGGCGGGGACGGTTGGTATGCCAACGAAAATCGGGGCGCACCAGGCTGTTACGTATGGAAAGTACCTGACTAGGATAATTTAAC]
[+] EMBL BX613907 [GAGTACGACGATACGCACGAGATACGCATCTCGGCCAATGCGTCCATCGTCGAGACGTCGATGGTTATTCCCAACCTGACGACGAACAGTGCGTACGAGGTGAAGGTTCGTGGGGCGACCGTAAGCACGGTGAATCCGAAAAAGGTTGTCCTCGGCACCTATTGTGAACCGATAAAGATTGCACTCCGGGCGAATTGCGAACAGTATCAGCCGCCTCCGCTGAGACACAATCCGTACGTCGATCAGGAGCTTGTCATACTGGCCGGTATCGTGATCGGGTGTTTCGGGCTGCTGCTCATCATACTGGCGATAGTGCTGTGGAGGAAATGTTTCCACGCGTCGTACCACGAGGCCGGCGATCAGCGACCATCGGAACGGACCGACCATAAACCGACGGTCCAATCGAATGGGTGGAAAACGTCCTGCGATTCGAACGGTATCGTGCAAACGTCGATACCCTCCGAGGAGTACATCAACGGACAGCAGCAGGCGATGATCGATCGGTTCCATCGCTAGGCCCGAGATGACTGATTAATGTAACTCGACGGACGGCCGGTGAGCCTCGCTGGCGGGGACGGTTGGTATGCCAACGAAAATCGGGGCGCACCAGGCTGTTACGTATGGAAAGTACCTGACTAGGATAATTTAAC]
[+] EMBL BX613908 [ ACGCACGAGATACGCATCTCGGCCAATGCGTCCATCGTCGAGACGTCGATGGTTATTCCCAACCTGACGACGAACAGTGCGTACGAGGTGAAGGTTCGTGGGGCGACCGTAAGCACGGTGAATCCGAAAAAGGTTGTCCTCGGCACCTATTGTGAACCGATAAAGATTGCACT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6433#0 ------------------------------------------------------------
consensus_6433#1 GAGTACGACGATACGCACGAGATACGCATCTCGGCCAATGCGTCCATCGTCGAGACGTCG 60
consensus_6433#0 ------------------------------------------------------------
consensus_6433#1 ATGGTTATTCCCAACCTGACGACGAACAGTGCGTACGAGGTGAAGGTTCGTGGGGCGACC 120
consensus_6433#0 --------------------------------------------TGAACCGATAAAGATT 16
consensus_6433#1 GTAAGCACGGTGAATCCGAAAAAGGTTGTCCTCGGCACCTATTGTGAACCGATAAAGATT 180
****************
consensus_6433#0 GCACTCCGGGCGAATTGCGAACAGTATCAGCCGCCTCCGCTGAGACACAATCCGTACGAC 76
consensus_6433#1 GCACTCCGGGCGAATTGCGAACAGTATCAGCCGCCTCCGCTGAGACACAATCCGTACGTC 240
********************************************************** *
consensus_6433#0 GATCAGGAGCTTGTCATACTGGCCGGTATCGTGATCGGGTGTTTCGGGCTGCTACTCATC 136
consensus_6433#1 GATCAGGAGCTTGTCATACTGGCCGGTATCGTGATCGGGTGTTTCGGGCTGCTGCTCATC 300
***************************************************** ******
consensus_6433#0 ATACTGGCGATAGTGCTGTGGAGGAAATGTTTCCACGCGTCGTACCACGAGGCCGGCGAT 196
consensus_6433#1 ATACTGGCGATAGTGCTGTGGAGGAAATGTTTCCACGCGTCGTACCACGAGGCCGGCGAT 360
************************************************************
consensus_6433#0 CAGCGACCATCGGAACGGACCGACCATAAACCGACGGTCCAATCGAATGGGTGGAAAACG 256
consensus_6433#1 CAGCGACCATCGGAACGGACCGACCATAAACCGACGGTCCAATCGAATGGGTGGAAAACG 420
************************************************************
consensus_6433#0 TCCTGCGATTCGAACGGTATCGTGCAAACGTCGATACCCTCCGAGGAGTACATCAACGGA 316
consensus_6433#1 TCCTGCGATTCGAACGGTATCGTGCAAACGTCGATACCCTCCGAGGAGTACATCAACGGA 480
************************************************************
consensus_6433#0 CAGCAGCAGGCGATGATCGATCGGTTCCATCGCTAGGCCCGAGATGACTGATTAATGGTA 376
consensus_6433#1 CAGCAGCAGGCGATGATCGATCGGTTCCATCGCTAGGCCCGAGATGACTGATTAATG--- 537
*********************************************************
consensus_6433#0 GGCAATGGTTGCTGCCGGTTGATGCGCACGTACTGCACGGTCACGAACTGAGCCCCGGTG 436
consensus_6433#1 ------------------------------------------------------------
consensus_6433#0 TCTCTGTGCTTGCAGTAACTCGACGGACGGCCGGTGAGCCTCGCTGGCGGGGACGGTTGG 496
consensus_6433#1 ---------------TAACTCGACGGACGGCCGGTGAGCCTCGCTGGCGGGGACGGTTGG 582
*********************************************
consensus_6433#0 TATGCCAACGAAAATCGGGGCGCACCTGGCTGTTACGTATGGAAAGTACCTGACTAGGAT 556
consensus_6433#1 TATGCCAACGAAAATCGGGGCGCACCAGGCTGTTACGTATGGAAAGTACCTGACTAGGAT 642
************************** *********************************
consensus_6433#0 AATTTAACGTAAGTCGCTTTAGGAAATGGCCGATATCTAGTGAAACACATCGAAACAGAC 616
consensus_6433#1 AATTTAAC---------------------------------------------------- 650
********
consensus_6433#0 TTGTTGCGACAGGGATGATGGAGCGTACCGTTCTGCCGCCAATCGTTCCTTCCGATGTAT 676
consensus_6433#1 ------------------------------------------------------------
consensus_6433#0 TTTGTTAGTTTATTTTTTCGTTGTATTTAAACATTTTTCTTTCAAACAGTTTTGAATATA 736
consensus_6433#1 ------------------------------------------------------------
consensus_6433#0 GTTTTTTGTTGTAAAAGGAGAAAAAATAATAGCCTTGCTATTGTGTGTGTGTGGGAATTC 796
consensus_6433#1 ------------------------------------------------------------
consensus_6433#0 AATCCAACACAGGATCGAATAACTTGATTCTACGTTCACTATCATCGTTATGTTTGTGTC 856
consensus_6433#1 ------------------------------------------------------------
consensus_6433#0 ATTCTTTGATTAAGCTTTGCGTTAACGTTATCACTTGCATTCTCAAGATGCAGCTCAGCT 916
consensus_6433#1 ------------------------------------------------------------
consensus_6433#0 TTTTCTTAACCACGGGTTGAGCAAAGCATTCAAACCGGGAAGGAATGCAAACATTTTGCT 976
consensus_6433#1 ------------------------------------------------------------
consensus_6433#0 GGTGCTTA 984
consensus_6433#1 --------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||