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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6492#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 863 fasta sequence
[CCGCGGACGCGTGGGCGAGCACGGTCAACAGCCTGCTGCTCGCTGGGACACTACTGGACAGTGGCAGGGGCAGCTCGTCCGAGGAGCTTACCCGGGAACAGAAAACTCGTTCCCCCGCCGAGCGGGACGATAACAATAACGACGATGCCGAGGAAGAACCGCCGGACAGTGAGCAGGAGGATGATGAGCTGCTGGAAAAGCGGACGCATGCTAGCGACCGCATGTCCGCCGAGCCCATGAGCAGTTCGGTCGGTTCGTTGCGCGCACTGTGCGATGAGCCGGAGCAGGATGGGCAGGGTGAAAAGGATCCCACAGCCACCACCACCGCTGGCGCACCGGATCCGGCTGTGCTGCGTGTCAAGTGGCAACTGGTGCCGTTGGATCAGAACGCATCGCTGATGGAGCTGTCGCAGGCAATAGACGTTTGCCGGACGCTGGTACGCTCGAATGCATACGGGCCCGATACGGACCAAAGCAAATGGCTCGTGCGACATTTGGTGGAGCTGCGGTACCGGTACCGCGAGCTGGTGGACTTTTCGCGCGATCCCGAAGCAGTGCTGGAGGAGACGGAGGTCATTCTGGGGCATCATTTCGTGCGCCGGAAACAGTACCCTTTGCAGCAGCTGCAGCGCAACCGGCACCTGTACTGTGACCACTGTTCCGGTGTCATTTGGAACGTTGTGCAGGCATCGTACGTTTGCAATGACTGCTCGTTTGCGGTGCATCACAAATGCTTGCGCAATGTGCTGCGTATCTGTGCGCACGTGGTCACGACGGAGCATAAGCTGCCGATCGAGTGCATCTGTCCCGAGATTGGGCTGGCCTTTCAGAAGTACACTTGCGCGGAATGTGGAACACAGCTG]
[+] EMBL BM593777 [CCGCGGACGCGTGGGCGAGCACGGTCAACAGCCTGCTGCTCGCTGGGACACTACTGGACAGTGGCAGGGGCAGCTCGTCCGAGGAGCTTACCCGGGAACAGAAAACTCGTTCCCCCGCCGAGCGGGACGATAACAATAACGACGATGCCGAGGAAGAACCGCCGGACAGTGAGCAGGAGGATGATGAGCTGCTGGAAAAGCGGACGCATGCTAGCGACCGCATGTCCGCCGAGCCCATGAGCAGTTCGGTCGGTTCGTTGCGCGCACTGTGCGATGAGCCGGAGCAGGATGGGCAGGGTGAAAAGGATCCCACAGCCACCACCACCGCTGGCGCACCGGATCCGGCTGTGCTGCGTGTCAAGTGGCAACTGGTGCCGTTGGATCAGAACGCATCGCTGATGGAGCTGTCGCAGGCAATAGACGTTTGCCGGACGCTGGTACGCTCGAATGCATACGGGCCCGATACGGACCAAAGCAAATGGCTCGTGCGACATTTGGTGGAGCTGCGGTACCGGTACCGCGAGCTGGTGGACTTTTCGCGCGATCCCGAAGCAGTGCTGGAGGAGACGGAGGTCATTCTGGGGCATCATTTCGTGCGCCGGAAACAGTACCCTTTGCAGCAGCTGCAGCGCAACCGGCACCTGTACTGTGACCACTGTTCCGGTG ]
[+] EMBL BM635863 [ ccgCACAGCCACCACCACCGCTGGCGCACCGGATCCGGCTGTGCTGCGTGTCAAGTGGCAACTGGTGCCGTTGGATCAGAACGCATCGCTGATGGAGCTGTCGCAGGCAATAGACGTTTGCCGGACGCTGGTACGCTCGAATGCATACGGGCCCGATACGGACCAAAGCAAATGGCTCGTGCGACATTTGGTGGAGCTGCGGTACCGGTACCGCGAGCTGGTGGACTTTTCGCGCGATCCCGAAGCAGTGCTGGAGGAGACGGAGGTCATTCTGGGGCATCATTTCGTGCGCCGGAAACAGTACCCTTTGCAGCAGCTGCAGCGCAACCGGCACCTGTACTGTGACCACTGTTCCGGTGTCATTTGGAACGTTGTGCAGGCATCGTACGTTTGCAATGACTGCTCGTTTGCGGTGCATCACAAATGCTTGCGCAATGTGCTGCGTATCTGTGCGCACGTGGTCACGACGGAGCATAAGCTGCCGATCGAGTGCATCTGTCCCGAGATTGGGCTGGCCTTTCAGAAGTACACTTGCGCGGAATGTGGAACACAGCTG]
consensusID : consensus_6492#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 857 fasta sequence
[CCGGTGCGTTTCCTGGTTCACTAACACTTTACTATCTACATCAGTACAAGTGTGTAAGTTACATCTCCTGTGGATTACCCCTCTCTACAAGTGAAAGAATGTGATTAAGTTCGGAGGGGGGAAATCATTCTAAAACACTGATAAGAACAGCATGTCCGATGTTTCGCCCCAGCGAAAGAATGAGCCAGTAGGCTGAGCTCATCATTAGCCGGATGATGTAAAGTTCGTGCGTTTCCACTGTGCCAGTGACAGTGATGCAGAGTACGGTGCAGAACCTCCGGGAGGGCCTCTGGAATCTACCGAGCACGGTCAACAGCCTGCTGCTCGCTGGGACACTACTGGACAGTGGCAGGGGCAGCTCGTCCGAGGAGCTTACCCGGGAACAGAAAACTCGTTCCCCCACCGAGCGGGACGATAACAATAACGACGATGCCGAGGAAGAACCGCCGGACAGTGACCAGGAGGATGATGAGCTGCCGGAAAAGCGGACGCATGCTAGCGACCGCATGTTCGCCGAGCCCATGAGCAGTTCGGTCGGTTCGTTGCGTGCACTGTGCGATGAGCCGGAGCAGGACGAGCGGGGTGAAAAGGATCCCACAGCCACCACCACCGCCACCAACACCGCTGGTCCGGATCCGGCTGTGCTGCGTGTCAAGTGGCAACTGGTGCCGTTGGATCAGAACGCATCGCTGGTGGAGCTGTCGCAGGCAATAGACGTTTGCCGGACGCTGGTACGCTCGAATGCGTACGGGCCCGATACGGACCAAAGCAAATGGCTCGTGCGACATTATGGTGGAGCTGCGGTACCGGTACCGCGAGCTGGTGGACTTTTCGCGCGATCCCGAAGCAGTGCTGGA]
[+] EMBL BM629688 [CCGGTGCGTTTCCTGGTTCACTAACACTTTACTATCTACATCAGTACAAGTGTGTAAGTTACATCTCCTGTGGATTACCCCTCTCTACAAGTGAAAGAATGTGATTAAGTTCGGAGGGGGGAAATCATTCTAAAACACTGATAAGAACAGCATGTCCGATGTTTCGCCCCAGCGAAAGAATGAGCCAGTAGGCTGAGCTCATCATTAGCCGGATGATGTAAAGTTCGTGCGTTTCCACTGTGCCAGTGACAGTGATGCAGAGTACGGTGCAGAACCTCCGGGAGGGCCTCTGGAATCTACCGAGCACGGTCAACAGCCTGCTGCTCGCTGGGACACTACTGGACAGTGGCAGGGGCAGCTCGTCCGAGGAGCTTACCCGGGAACAGAAAACTCGTTCCCCCGCCGAGCGGGACGATAACAATAACGACGATGCCGAGGAAGAACCGCCGGACAGTGAGCAGGAGGATGATGAGCTGCTGGAAAAGCGGAC ]
[+] EMBL BM609538 [ ccgATCATTAGCCGGATGATGTAAAGTTTGTGCGTTTCCACTGTGCCAGTGACAGTGATGCAGAGTACGGTGCAGAACCTCCGGGAGGGCCTCTGGAATCTACCGAGCACGGTCAACAGCCTGCTGCTCGCTGGGACACTGCTGGACAGTGGCAGGGGCAGCTCGTCCGAGGAGCTTACCCGGGAACAGAAAACTCGTTCCCCCACCGAGCGGGACGATAACAATAACGACGATGCCGAGGAAGAACCGCCGGACAGTGACCAGGAGGATGATGAGCTGCCGGAAAAGCGGACGCATGCTAGCGACCGCATGTTCGCCGAGCCCATGAGCAGTTCGGTCGGTTCGTTGCGTGCACTGTGCGATGAGCCGGAGCAGGACGAGCGGGGTGAAAAGGATCCCACAGCCACCACCACCGCCACCAACACCGCTGGTCCGGATCCGGCTGTGCTGCGTGTCAAGTGGCAACTGGTGCCGTTGGATCAGAACGCATCGCTGGTGGAGCTGTCGCAGGCAATAGACGTTTGCCGGACGCTGGTACGCTCGAATGCGTACGGGCCCGATACGGACCAAAGCAAATGGCTCGTGCGACATTATGGTGGAGCTGCGGTACCGGTACCGC ]
[+] EMBL BM651658 [ ccGGGCAGCTCGTCCGAGGAGCTTACCCGGGAACAGAAAACTCGTTCCCCCACCGAGCGGGACGATAACAATAACGACGATGCCGAGGAAGAACCGCCGGACAGTGACCAGGAGGATGATGAGCTGCCGGAAAAGCGGACGCATGCTAGCGACCGCATGTTCGCCGAGCCCATGAGCAGTTCGGTCGGTTCGTTGCGTGCACTGTGCGATGAGCCGGAGCAGGACGAGCGGGGTGAAAAGGATCCCACAGCCACCACCACCGCCACCAACACCGCTGGTCCGGATCCGGCTGTGCTGCGTGTCAAGTGGCAACTGGTGCCGTTGGATCAGAACGCATCGCTGGTGGAGCTGTCGCAGGCAATAGACGTTTGCCGGACGCTGGTACGCTCGAATGCGTACGGGCCCGATACGGACCAAAGCAAATGGCTCGTGCGACATT TGGTGGAGCTGCGGTACCGGTACCGCGAGCTGGTGGACTTTTCGCGCGATCCCGAAGCAGTGCTGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6492#0 ------------------------------------------------------------
consensus_6492#1 CCGGTGCGTTTCCTGGTTCACTAACACTTTACTATCTACATCAGTACAAGTGTGTAAGTT 60
consensus_6492#0 ------------------------------------------------------------
consensus_6492#1 ACATCTCCTGTGGATTACCCCTCTCTACAAGTGAAAGAATGTGATTAAGTTCGGAGGGGG 120
consensus_6492#0 ------------------------------------------------------------
consensus_6492#1 GAAATCATTCTAAAACACTGATAAGAACAGCATGTCCGATGTTTCGCCCCAGCGAAAGAA 180
consensus_6492#0 ------------------------------------------------------------
consensus_6492#1 TGAGCCAGTAGGCTGAGCTCATCATTAGCCGGATGATGTAAAGTTCGTGCGTTTCCACTG 240
consensus_6492#0 ----------------------------------------------CCGCGGACGCGTGG 14
consensus_6492#1 TGCCAGTGACAGTGATGCAGAGTACGGTGCAGAACCTCCGGGAGGGCCTCTGGAATCTAC 300
** * * *
consensus_6492#0 GCGAGCACGGTCAACAGCCTGCTGCTCGCTGGGACACTACTGGACAGTGGCAGGGGCAGC 74
consensus_6492#1 -CGAGCACGGTCAACAGCCTGCTGCTCGCTGGGACACTACTGGACAGTGGCAGGGGCAGC 359
***********************************************************
consensus_6492#0 TCGTCCGAGGAGCTTACCCGGGAACAGAAAACTCGTTCCCCCGCCGAGCGGGACGATAAC 134
consensus_6492#1 TCGTCCGAGGAGCTTACCCGGGAACAGAAAACTCGTTCCCCCACCGAGCGGGACGATAAC 419
****************************************** *****************
consensus_6492#0 AATAACGACGATGCCGAGGAAGAACCGCCGGACAGTGAGCAGGAGGATGATGAGCTGCTG 194
consensus_6492#1 AATAACGACGATGCCGAGGAAGAACCGCCGGACAGTGACCAGGAGGATGATGAGCTGCCG 479
************************************** ******************* *
consensus_6492#0 GAAAAGCGGACGCATGCTAGCGACCGCATGTCCGCCGAGCCCATGAGCAGTTCGGTCGGT 254
consensus_6492#1 GAAAAGCGGACGCATGCTAGCGACCGCATGTTCGCCGAGCCCATGAGCAGTTCGGTCGGT 539
******************************* ****************************
consensus_6492#0 TCGTTGCGCGCACTGTGCGATGAGCCGGAGCAGGATGGGCAGGGTGAAAAGGATCCCACA 314
consensus_6492#1 TCGTTGCGTGCACTGTGCGATGAGCCGGAGCAGGACGAGCGGGGTGAAAAGGATCCCACA 599
******** ************************** * ** *******************
consensus_6492#0 GCCACCACCACCGCTGGC---------GCACCGGATCCGGCTGTGCTGCGTGTCAAGTGG 365
consensus_6492#1 GCCACCACCACCGCCACCAACACCGCTGGTCCGGATCCGGCTGTGCTGCGTGTCAAGTGG 659
************** * * ******************************
consensus_6492#0 CAACTGGTGCCGTTGGATCAGAACGCATCGCTGATGGAGCTGTCGCAGGCAATAGACGTT 425
consensus_6492#1 CAACTGGTGCCGTTGGATCAGAACGCATCGCTGGTGGAGCTGTCGCAGGCAATAGACGTT 719
********************************* **************************
consensus_6492#0 TGCCGGACGCTGGTACGCTCGAATGCATACGGGCCCGATACGGACCAAAGCAAATGGCTC 485
consensus_6492#1 TGCCGGACGCTGGTACGCTCGAATGCGTACGGGCCCGATACGGACCAAAGCAAATGGCTC 779
************************** *********************************
consensus_6492#0 GTGCGACATT-TGGTGGAGCTGCGGTACCGGTACCGCGAGCTGGTGGACTTTTCGCGCGA 544
consensus_6492#1 GTGCGACATTATGGTGGAGCTGCGGTACCGGTACCGCGAGCTGGTGGACTTTTCGCGCGA 839
********** *************************************************
consensus_6492#0 TCCCGAAGCAGTGCTGGAGGAGACGGAGGTCATTCTGGGGCATCATTTCGTGCGCCGGAA 604
consensus_6492#1 TCCCGAAGCAGTGCTGGA------------------------------------------ 857
******************
consensus_6492#0 ACAGTACCCTTTGCAGCAGCTGCAGCGCAACCGGCACCTGTACTGTGACCACTGTTCCGG 664
consensus_6492#1 ------------------------------------------------------------
consensus_6492#0 TGTCATTTGGAACGTTGTGCAGGCATCGTACGTTTGCAATGACTGCTCGTTTGCGGTGCA 724
consensus_6492#1 ------------------------------------------------------------
consensus_6492#0 TCACAAATGCTTGCGCAATGTGCTGCGTATCTGTGCGCACGTGGTCACGACGGAGCATAA 784
consensus_6492#1 ------------------------------------------------------------
consensus_6492#0 GCTGCCGATCGAGTGCATCTGTCCCGAGATTGGGCTGGCCTTTCAGAAGTACACTTGCGC 844
consensus_6492#1 ------------------------------------------------------------
consensus_6492#0 GGAATGTGGAACACAGCTG 863
consensus_6492#1 -------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||