These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_661#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 464 fasta sequence [TTTTTTTTGATGAGAAAACGTTTTATTCTTTAACGTTCACTCCTTGCGATTCGTGCAGACAGGAATTATAATTGCAGGTATTATTATAATTTAAATGTTTAAAATAGGTTATAATGCTTATTACATCTTGTATCCCACGTTAACGTTTGAAAACAACTGACTTTGCAACAGTGAGTCTAGCGCTCGCTGTACCTTGGGGTCATGCAACAGTGACGTTGGCATGGTGTTCGTACTCGGCTTGGTTTCGACTGAAGCTACAGGCTTCGCAACACCTAAAATCGATGGTTTGTTCATGATGTCCAAAATTTTCCTCTGCAGTTCTCGCTCCGTTTCCTGTTTGCTTTTTACCGGAGCAGCGGAAACTATCGGTGGTATTAGGGAGCTTGCGGTCGTACTATCCACATCCTCTCCCAGTTCCAGCCGGATCTGCGTCTCTTTGCGTTCGTTCAGATATTTGATTAGCC] [+] EMBL AGA280593 [TTTTTTTTGATGAGAAAACGTTTTATTCTTTAACGTTCACTCCTTGCGATTCGTGCAGACAGGAATTATAATTGCAGGTATTATTATAATTTAAATGTTTAAAATAGGTTATAATGCTTATTACATCTTGTATCCCACGTTAACGTTTGAAAACAACTGACTTTGCAACAGTGAGTCTAGCGCTCGCTGTACCTTGGGGTCATGCAACAGTGACGTTGGCATGGTGTTCGTACTCGGCTTGGTTTCGACTGAAGCTACAGGCTTCGCAACACCTAAAATCGATGGTTTGTTCATGATGTCCAAAATTTTCCTCTGCAGTTCTCGCTCCGTTTCCTGTTTGCTTTTTACCGGAGCAGCGGAAACTATCGGTGGTATTAGGGAGCTTGCGGTCGTACTATCCACATCCTCTCCCAGTTCCAGCCGGATCTGCGTCTCTTTGCGTTCGTTCAGATATTTGATTAGCC] consensusID : consensus_661#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 437 fasta sequence [CACGATCAAATGTTGCTGTTTTAATAAAAGTATTAGACGGATCCACAAAGCTGGACAGAACAGCTTTGCTTAACTATTGCGCGACTATTTCTGTGGGCCCGCCGCTGCGAATAATTGAAGAGAAAACGTTTTATTCTTTAACGTTCATTCCTTGCGATTCGTGCAGACAGGCATTATAATTGCAGGTATTATTATAATTTAAATGTTTAAAATAGGTTATAATGCTTATTACATCTTGTATCCCACGTTAACGTTTGAAAACAACTGACTTTGCAACAGTGAGTCTAGCGCTCGCTGTACCTTGGGGTCATGAACAAACCATCGATTTTAGGTGTTGCGAAGCCTGTAGCTTCAGTCGAAACCAAGCCGAGTACGAACACCATGCCAACGTCCACACTGTACCTTGGGGTCATGCAACAGTGCCCACGCGTCCGCGG] [-] EMBL BM597311 [CACGATCAAATGTTGCTGTTTTAATAAAAGTATTAGACGGATCCACAAAGCTGGACAGAACAGCTTTGCTTAACTATTGCGCGACTATTTCTGTGGGCCCGCCGCTGCGAATAATTGAAGAGAAAACGTTTTATTCTTTAACGTTCATTCCTTGCGATTCGTGCAGACAGGCATTATAATTGCAGGTATTATTATAATTTAAATGTTTAAAATAGGTTATAATGCTTATTACATCTTGTATCCCACGTTAACGTTTGAAAACAACTGACTTTGCAACAGTGAGTCTAGCGCTCGCTGTACCTTGGGGTCATGAACAAACCATCGATTTTAGGTGTTGCGAAGCCTGTAGCTTCAGTCGAAACCAAGCCGAGTACGAACACCATGCCAACGTCCACACTGTACCTTGGGGTCATGCAACAGTGCCCACGCGTCCGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_661#0 ------------------------------------------------------------ consensus_661#1 CACGATCAAATGTTGCTGTTTTAATAAAAGTATTAGACGGATCCACAAAGCTGGACAGAA 60 consensus_661#0 ------------------------------------------------TTTTTTTTGATG 12 consensus_661#1 CAGCTTTGCTTAACTATTGCGCGACTATTTCTGTGGGCCCGCCGCTGCGAATAATTGAAG 120 * **** * consensus_661#0 AGAAAACGTTTTATTCTTTAACGTTCACTCCTTGCGATTCGTGCAGACAGGAATTATAAT 72 consensus_661#1 AGAAAACGTTTTATTCTTTAACGTTCATTCCTTGCGATTCGTGCAGACAGGCATTATAAT 180 *************************** *********************** ******** consensus_661#0 TGCAGGTATTATTATAATTTAAATGTTTAAAATAGGTTATAATGCTTATTACATCTTGTA 132 consensus_661#1 TGCAGGTATTATTATAATTTAAATGTTTAAAATAGGTTATAATGCTTATTACATCTTGTA 240 ************************************************************ consensus_661#0 TCCCACGTTAACGTTTGAAAACAACTGACTTTGCAACAGTGAGTCTAGCGCTCGCTGTAC 192 consensus_661#1 TCCCACGTTAACGTTTGAAAACAACTGACTTTGCAACAGTGAGTCTAGCGCTCGCTGTAC 300 ************************************************************ consensus_661#0 CTTGGGGTCATGCAACAGTGACGTTGGCATGGTGTTCGTACTCGGCTTGGTTTCGACTGA 252 consensus_661#1 CTTGGGGTCATG-------------AACAAACCATCGATTTTAGGTGTTGCGAAGCCTGT 347 ************ ** * * * ** * * * *** consensus_661#0 AGCTACAGGCTTCGCAACACCTAAAATCGATGGTTTGTTCATGATGTCCAAAATTTTCCT 312 consensus_661#1 AGCTTCAGTCGAAACCAAGCCGAGTACGAACACCATGC---CAACGTCCACACTGTACCT 404 **** *** * * * ** * * * ** * ***** * * * *** consensus_661#0 CTGCAGTTCTCGCTCCGTTTCCTGTTTGCTTTTTACCGGAGCAGCGGAAACTATCGGTGG 372 consensus_661#1 TGG--GGTCATGCAACAGTGCCCACGCGTCCGCGG------------------------- 437 * * ** ** * * ** * consensus_661#0 TATTAGGGAGCTTGCGGTCGTACTATCCACATCCTCTCCCAGTTCCAGCCGGATCTGCGT 432 consensus_661#1 ------------------------------------------------------------ consensus_661#0 CTCTTTGCGTTCGTTCAGATATTTGATTAGCC 464 consensus_661#1 -------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||