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Anopheles gambiae
cluster # 6612 cluster # 6612       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6612#0 length = 1118 sequences # 5  

consensusID : consensus_6612#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1118
fasta sequence
                              [CCGACGCTATTAGGCTAGGCTTTTGTGCAACAAGCAATAGAGAAGGCTCCGGAAAGGGTTGTTTTGAGGAGGAGGGAGACGAAAGCTAAGCTTGCATTCAGAAAAAAAACACACACACACATACAGACACACATACACAAATATGTATATTTATACATGT----ACACACACACACACACTC-AAAAAAGGTCATCATACCCCGCCAGCTACAGGTAGCTATT-AAAAAAAAAGCAAACCCTGCCCGAATGAGCACACTGACGAGCGCCCCTTTAGCGAGAGAAAGAATGAGAAAGAAAGAGAAAAAGAGAGAAATATTAAGTAGAAGAAATCTGCATTCTTTTAGCAAAAATTGTGAGCGAG--AAAAAAAAGAGAGAGACAGAGAGAGAAAGAGCGAGAGAGCGAGTGTGTGTAGAGTAGTGGAGCCAGGCAGCGAGGAGAGGAGGAATCGTTGTAGAAACATAAGATTTACCTTTTTAGATAGTCCTTTAACAAAGCAAACAAAAATAAGGTTAAAAAAGAAAGGTCAGCGAAGTGCAAACAAGTAAAAGCTAGCAAAATCCACCATTGCCATTTGC-AAAAA------AAAACAAAACAAAAC-----AAAACAAAACAAAAAAATACCAAAAAAAAAAAACTACCAAAACCAAAACCAAAAATCCGATTCCGTTCTAGTAGTGGTGCGTGCTCGGTGCGATAAATCCGCACCAAGCGAGCTGAAGGCGACAACGGTAAAGGCACAGGCGCAGGCCGATCCTATCTCCTATCTCCTTGCCGCCGTTGTGTTTGCGTTCCACTTTTTCTCTATTTAAACATTAAAAAGCAAC----CAAAAAAAAACCAAAAACGGCATACTTTTTAAATAAACGAAACTCGTGCCACTCTCGCTGGGTTTTTGCGCTGCTTTGCGTTCGCTCCAGGGTCTGGTGTCCAGTGTTCGGGAATGGGCGATGGGACGGGGCAGGCAGGCCGGCCAACAACAGAACGTTGGTGGCAAATCACACACACACACACATACACACACGCCACACGCCACACGTTCAGTAATCCTTCCCTTTTTACCTTTTTCGAGACGTGCTTGCGCGTAGTGTAACAAAGATACACAAACACCCACACACACACACACAAAACAA]

[+] EMBL BM632140             [CCGACGCTATTAGGCTAGGCTTTTGTGCAACAAGCAATAGAGAAGGCTCCGGAAAGGGTTGTTTTGAGGAGGAGGGAGACGAAAGCTAAGCTTGCATTCAGAAAAAAAACACACACACACATACAGACACACATACACAAATATGTATATTTATACATGT    ACACACACACACACACTC AAAAAAGGTCATCATACCCCGCCAGCTACAGGTAGCTATT AAAAAAAAAGCAAACCCTGCCCGAATGAGCACACTGACGAGCGCCCCTTTAGCGAGAGAAAGAATGAGAAAGAAAGAGAAAAAGAGAGAAATATTAAGTAGAAGAAATCTGCATTCTTTTAGCAAAAATTGTGAGCGAG  AAAAAAAAGAGAGAGACAGAGAGAGAAAGAGCGAGAGAGCGAGTGTGTGTAGAGTAGTGGAGCCAGGCAGCGAGGAGAGGAGGAATCGTTGTAGAAACATAAGATTTACCTTTTTAGATAGTCCTTTAACAAAGCAAACAAAAATAAGGTTAAAAAAGAAAGGTCAGCGAAGTGCAAACAAGTAAAAGCTAGCAAAATCCACCATTGCCATTTGC AAAAA      AAAACAAAACAAAAC     AAAACAAAACAAAAAAATACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM627903             [                                                                                                                        ccgCAGACACACATACACAAATATGTATATTTATACATGTACACACACACACACACACACTCAAAAAAAGGTCATCATACCCCGCCAGCTACAGGTAGCTATTAAAAAAAAAAGCAAACCCTGCCCGAATGAGCACACTGACGAGCGCCCCTTTAGCGAGAGAAAGAATGAGAAAGAAAGAGAAAAAG      ATATTAAGTAGAAGAAATCTGCATTCTTTTAGCAAAAATTGTGAGCGAGAAAAAAAAAAGAGAGAGACAGAGAGGGGGGGGGCGAGAGAGCGAGTGTGTGTAGAGTAGTGGAGCCAGGCAGCGAGGGGAGGAGGAATCGTTGTAGAAACATAAGATTTACCTTTTTAGATAGTCCTTTAACAAAGCAAACAAAAATAAGGTTAAAAAAGAAAGGTCAGCGAAGTGCAAACAAGTAAAAGCTAGCAAAATCCACCATTGCCATTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX615135             [                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAGGAGGAATCGTTGTAGAAACATAATATTTACCTTTTTAGATAGTCCTTTAACAAAGCAAACAAAAATAAGGTTAAAAAAGAAAGGTCAGCGAAGTGCAAACAAGTAAAAGCTAGCAAAATCCACTATTGCCATTTGCAAAAAA      AAAACAAAACAAAACAAAATAAAACAAAACAAAAAAATACCAAAAAAAAAAAACTACCAAAACCAAAACCAAAAATCCGATTCCGTTCTAGTAGTGGTGCGTGCTCGGTGCGATAAATCCGCACCAAGCGAGCTGAAGGCGACAACGGTA                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX616459             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTTAACAAAGCAAACAAAAATAAGGTTAAAAAAGAAAGGTCAGCGAAGTGCAAACAAGTAAAAGCTAGCAAAATCCACCATTGCCATTTGC AAAAAAAAAACAAAACAAAACAAAAC     AAAACAAAACAAAAAAATACC AAAAAAAAAAACTACCAAAACCAAAACCAAAAATCCGATTCCGTTCTAGTAGTGGTGCGTGCTCGGTGCGATAAATCCGCACCAAGCGAGCTGAAGGCGACAACGGTAAAGGCACAGGCGCAGGCCGATCCTATCTCCTATCTCCTTGCCGCCGTTGTGTTTGCGTTCCACTTTTTCTCTATTTAAACATTAAAAAGCAAC    CAAAAAAAAACCAAAAACGGCATACTTTTTAAATAAACGAAACTCGTGCCACTCTCGCTGGGTTTTTGCGCTGCTTTGCGTTCGCTCCAGGGTCTGGTGTCCAGTGTTCGGGAATGGGCGATGGGACGGGGCAGGCAGGCCGGCCAACAACAGAACGTTGGTGGCAAATCAC                                                                                                                                   ]
[+] EMBL BM637467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACTACCAAAACCAAAACCAAAAATCCGATTCCGTTCTAGTAGTGGTGCGTGCTCGGTGCGATAAATCCGCACCAAGCGAGCGAAAGGCGACAACGGTAAAGGCACAGGCGCAGGCCGATCCTATCTCCTATCTCCTTGCCGCCGTTGTGTTTGCGTTCCACTTTTTCTCTATTTAAACATTAAAAAGCAACAAAAAAAAAAAAAACCAAAAACGGCATACTTTTTAAATAAACGAAACTCGTGCCACTCTCGCTGGGTTTTTGCGCTGCTTTGCGTTCGCTCCAGGGTCTGGTGTCCAGTGTTCGGGAATGGGCGATGGGACGGGGCAGGCAGGCCGGCCAACAACAGAACGTTGGTGGCAAATCACACACACACACACATACACACACGCCACACGCCACACGTTCAGTAATCCTTCCCTTTTTACCTTTTTCGAGACGTGCTTGCGCGTAGTGTAACAAAGATACACAAACACCCACACACACACACACAAAACAA]


>consensus_6612#0 CCGACGCTATTAGGCTAGGCTTTTGTGCAACAAGCAATAGAGAAGGCTCCGGAAAGGGTT GTTTTGAGGAGGAGGGAGACGAAAGCTAAGCTTGCATTCAGAAAAAAAACACACACACAC ATACAGACACACATACACAAATATGTATATTTATACATGTACACACACACACACACTCAA AAAAGGTCATCATACCCCGCCAGCTACAGGTAGCTATTAAAAAAAAAGCAAACCCTGCCC GAATGAGCACACTGACGAGCGCCCCTTTAGCGAGAGAAAGAATGAGAAAGAAAGAGAAAA AGAGAGAAATATTAAGTAGAAGAAATCTGCATTCTTTTAGCAAAAATTGTGAGCGAGAAA AAAAAGAGAGAGACAGAGAGAGAAAGAGCGAGAGAGCGAGTGTGTGTAGAGTAGTGGAGC CAGGCAGCGAGGAGAGGAGGAATCGTTGTAGAAACATAAGATTTACCTTTTTAGATAGTC CTTTAACAAAGCAAACAAAAATAAGGTTAAAAAAGAAAGGTCAGCGAAGTGCAAACAAGT AAAAGCTAGCAAAATCCACCATTGCCATTTGCAAAAAAAAACAAAACAAAACAAAACAAA ACAAAAAAATACCAAAAAAAAAAAACTACCAAAACCAAAACCAAAAATCCGATTCCGTTC TAGTAGTGGTGCGTGCTCGGTGCGATAAATCCGCACCAAGCGAGCTGAAGGCGACAACGG TAAAGGCACAGGCGCAGGCCGATCCTATCTCCTATCTCCTTGCCGCCGTTGTGTTTGCGT TCCACTTTTTCTCTATTTAAACATTAAAAAGCAACCAAAAAAAAACCAAAAACGGCATAC TTTTTAAATAAACGAAACTCGTGCCACTCTCGCTGGGTTTTTGCGCTGCTTTGCGTTCGC TCCAGGGTCTGGTGTCCAGTGTTCGGGAATGGGCGATGGGACGGGGCAGGCAGGCCGGCC AACAACAGAACGTTGGTGGCAAATCACACACACACACACATACACACACGCCACACGCCA CACGTTCAGTAATCCTTCCCTTTTTACCTTTTTCGAGACGTGCTTGCGCGTAGTGTAACA AAGATACACAAACACCCACACACACACACACAAAACAA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)