These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_663#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 641 fasta sequence [CGCACTGAATATGACATACTGACACTCTGGTTCCGTTGCGTTGTGTCTTTGTTGGTCCTCTGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTCAAGGACGCCAAAGTCGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGATCACGTACGTACGTACGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCGGGGATTTGCCCGAGAGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAATTGCGGGAAGATTTGCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGAGACGCATACGCGCGGTACTTTGTATGGGAGCGTCATCGAATCGAGGCGTGGAGATAACTAAATTCCACCGTGTCAAAGCTGAGATAATATCCTTCGCGCAAGTAACACACAAACACACCTGCCATCGCACATTCTCTCCGTTGGCTGCAGCTGGGGAGAAGATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTCCTCGACGATAGCGCACCTAAGTCTCAGCAGGAGGCAGCAGCATCAGCAGCAGCACCAGCAGCGATGATGAAAGCATCCCTTACGCCTG] [+] EMBL BX617103 [CGCACTGAATATGACATACTGACACTCTGGTTCCGTTGCGTTGTGTCTTTGTTGGTCCTCTGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTCAAGGACGCCAAAGTCGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGATCACGTACGTACGTACGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCGGGGATTTGCCCGAGAGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAATTGCGGGAAGATTTGCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGAGACGCATACGCGCGGTACTTTGTATGGGAGCGTCATCGAATCGAGGCGTGGAGATAACTAAATTCCACCGTGTCAAAGCTGAGATAATATCCTTCGCGCAAGTAACACACAAACACACCTGCCATCGCACATTCTCTCCGTTGGCTGCAGCTGGGGAGAAGATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTCCTCGACGATAGCGCACCTAAGTCTCAGCAGGAGGCAGCAGCATCAGCAGCAGCACCAGCAGCGATGATGAAAGCATCCCTTACGCCTG] consensusID : consensus_663#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 445 fasta sequence [ACCCCGTACCTAAGCGCACTGAATATGACATACTGACACTCCGGTTCCGTTGCGTTGTGTCCTTGTTGATCCTCTGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTCAAGGACGCCAAAGTCGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGATCACGTACGTACGTACGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCGGGGATTTGCCCGAGAGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAATTGCGGGAAGATTTGCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGAGACGCATACGCGCGGTACTTTGTATGGGAGCTTTGCTGATTTCACTCGAGACATTGCCGGTGTGCTGTCGTGTGCCCGTACACTC] [-] EMBL AGA280602 [ACCCCGTACCTAAGCGCACTGAATATGACATACTGACACTCCGGTTCCGTTGCGTTGTGTCCTTGTTGATCCTCTGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTCAAGGACGCCAAAGTCGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGATCACGTACGTACGTACGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCGGGGATTTGCCCGAGAGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAATTGCGGGAAGATTTGCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGAGACGCATACGCGCGGTACTTTGTATGGGAGCTTTGCTGATTTCACTCGAGACATTGCCGGTGTGCTGTCGTGTGCCCGTACACTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_663#0 --------------CGCACTGAATATGACATACTGACACTCTGGTTCCGTTGCGTTGTGT 46 consensus_663#1 ACCCCGTACCTAAGCGCACTGAATATGACATACTGACACTCCGGTTCCGTTGCGTTGTGT 60 *************************** ****************** consensus_663#0 CTTTGTTGGTCCTCTGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTC 106 consensus_663#1 CCTTGTTGATCCTCTGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTC 120 * ****** *************************************************** consensus_663#0 AAGGACGCCAAAGTCGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGAT 166 consensus_663#1 AAGGACGCCAAAGTCGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGAT 180 ************************************************************ consensus_663#0 CACGTACGTACGTACGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCG 226 consensus_663#1 CACGTACGTACGTACGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCG 240 ************************************************************ consensus_663#0 GGGATTTGCCCGAGAGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAA 286 consensus_663#1 GGGATTTGCCCGAGAGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAA 300 ************************************************************ consensus_663#0 TTGCGGGAAGATTTGCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGA 346 consensus_663#1 TTGCGGGAAGATTTGCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGA 360 ************************************************************ consensus_663#0 GACGCATACGCGCGGTACTTTGTATGGGAGCGTCATCGAATCGAGGCGTGGAGATAACTA 406 consensus_663#1 GACGCATACGCGCGGTACTTTGTATGGGAGCTTTGCTGATTTCACTCGAGACATTGCCGG 420 ******************************* * ** * * ** * * * consensus_663#0 AATTCCACCGTGTCAAAGCTGAGATAATATCCTTCGCGCAAGTAACACACAAACACACCT 466 consensus_663#1 TGTGCTGTCGTGT----GCCCGTACACTC------------------------------- 445 * * ***** ** * * * consensus_663#0 GCCATCGCACATTCTCTCCGTTGGCTGCAGCTGGGGAGAAGATAGTGTGTGTGTGTGTGT 526 consensus_663#1 ------------------------------------------------------------ consensus_663#0 GTGTGTGTGTGTGTGTGTGTGTGGGTCCTCGACGATAGCGCACCTAAGTCTCAGCAGGAG 586 consensus_663#1 ------------------------------------------------------------ consensus_663#0 GCAGCAGCATCAGCAGCAGCACCAGCAGCGATGATGAAAGCATCCCTTACGCCTG 641 consensus_663#1 ------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||