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Anopheles gambiae
cluster # 6637 cluster # 6637       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6637#0 length = 1035 sequences # 5  

consensusID : consensus_6637#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1035
fasta sequence
                              [TCGCCCGAGGTTAAAAGCAAACAAATACGGACTGCCGTGCTCGGCGGGCTGAAGTGGACGAATCGGCGCGA-ACGACGCTATGTCACACTTCCATTTTGGCCATCGCCGACCGTGGACGGTCCTATGCATTATGGAGAAACTGGAGACAACACTGGACGCACGGTGCTGTCTCACCGTACGGGGTGGGAATTATTAATTTAGAACGTGAGGGTACAACAAGCTGTAAATATTCGATTCCTGTGTAGGCAGTGGCACCGTCGGTGAGAGAGCACACGAGAGCAAACACTGGGGTTTATTCATGTTTTTAGCAGCGGGTTTTCTTTTTGTAATTTTAAGCGACAGTTTACACTAATAGCACAAAATTGAACGCTCAACAAATTAGACACTAATTAACGCTTGACGAGATACTAATAGAAACGCGTGTGCACCGGGAGAATATTTCAGCGTGCGAAACGAAAAGGAAAATTCATTTTACTTGGGCAGTTTAAGAACACGCGGAACGAAAGCAATAGGATTAAAACATACTAAAGTTGCTGGTTGTGTTTGAGAAA-AA-AAATCAAACA-C-ACAACACGATCGTGCTTTGGGATATAA-GCAAGAAC-GCGTCTGTACGATGCTGATCGGTACGAACTTGTCGGTAAAAGGTT-G-CGCTCACGCGTACACGCGCA-GCTCT-AGCCGCAGTAAGATAAGATAATGC-TAGT-CTAA-TTA-CTGTTTAA--TTGAGCGGACAAGAACTGACAGGGAAAACGGAAAGCGCCCAATAGGACAGAGGCACCCAGCGAGCCGATGCGGCGATATGGAGGCAATCGAGGCCACTAAAGCCTTCCGCCGCGCGCTTACACTAACAGGGGGAGAGGCAAAGAAATTACTGATCGTAAACTCCTTCAATGGGACCACGAATCACCGGATCCGCAAATGTGAGGAATAAAATAAAGCATCATTAATAGCATTAACGACCGATAAATAGTGTAAAAGGGTGGCCCCATCGGTGGCCGTCGCGCTAACGCCAGCAATAATTGTGAAATTGTGCGAAAATCTAGG]

[+] EMBL AL930829             [TCGCCCGAGGTTAAAAGCAAACAAATACGGACTGCCGTGCTCGGCGGGCTGAAGTGGACGAATCGGCGCGA ACGACGCTATGTCACACTTCCATTTTGGCCATCGCCGACCGTGGACGGTCCTATGCATTATGGAGAAACTGGAGACAACACTGGACGCACGGTGCTGTCTCACCGTACGGGGTGGGAATTATTAATTTAGAACGTGAGGGTACAACAAGCTGTAAATATTCGATTCCTGTGTAGGCAGTGGCACCGTCGGTGAGAGAGCACACGAGAGCAAACACTGGGGTTTATTCATGTTTTTAGCAGCGGGTTTTCTTTTTGTAATTTTAAGCGACAGTTTACACTAATAGCACAAAATTGAACGCTCAACAAATTAGACACTAATTAACGCTTGACGAGATACTAATAGAAACGCGTGTGCACCGGGAGAATATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX624950             [                               CTGCCGTGCTCGGCGGGCTGAAGTGGACGAATCGGCGCGA ACGACGCTATGTCACACTTCCATTTTGGCCATCGCCGACCGTGGACGGTCCTATGCATTATGGAGAAACTGGAGACAACACTGGACGCACGGTGCTGTCTCACCGTACGGGGTGGGAATTATTAATTTAGAACGTGAGGGTACAACAAGCTGTAAATATTCGATTCCTGTGTAGGCAGTGGCACCGTCGGTGAGAGAGCACACGAGAGCAAACACTGGGGTTTATTCATGTTTTTAGCAGCGGGTTTTCTTTTTGTAATTTTAAGCGACAGTTTACACTAATAGCACAAAATTGAACGCTCAACAAATTAGACACTAATTAACGCTTGACGAGATACTAATAGAAACGCGTGTGCACCGGGAGAATATTTCAGCGTGCGAAACGAAAAGGAAAATTCATTTTACTTGGGCAGTTTAAGAACACGCGGAACGAAAGCAATAGGATTAAAACATACTAAAGTTGCTGGTTGTGTTTGAGAAA AA AAATCAAACA C ACAACACGATCGTGCTTTGGGATATAA GCAAGAAC GCGTCTGTACGATGCTGATCGGTACGAACTTGTCGGTAAAAGGGT G CGCTCACGCGTACACGCGCA GCTCT AGCCGCAGTAAGATAAGATAATGC TAGT CTAA TTA CTGGTTAA  TTGAGCGGACNAGAACTGACAGGGAAAACGGAAAGCGCCCAATAGGACAGANGCACCCAGCGAGCCGATGCn                                                                                                                                                                                                                                                          ]
[+] EMBL BX467962             [                                                       gccaGAATCNCCACGAGNCGACGCTATGTCACACTTCCATTTTGGCCATCGCCGACCGTGGACGGTCCTATGCATTATGGAGAAACTGGAGACAACACTGGACGCACGGTGCTGTCTCACCGTACGGGGTGGGAATTATTAATTTAGAACGTGAGGGTACAACAAGCTGTAAATATTCGATTCCTGTGTAGGCAGTGGCACCGTCGGTGAGAGAGCACACGAGAGCAAACACTGGGGTTTATTCATGTTTTTAGCAGCGGGTTTTCTTTTTGTAATTTTAAGCGACAGTTTACACTAATAGCACAAAATTGAACGCTCAACAAATTAGACACTAATTAACGCTTGACGAGATACTAATAGAAACGCGTGTGCACCGGGAGAATATTTCAGCGTGCGAAACGAAAAGGAAAATTCATTTTACTTGGGCAGTTTAAGAACACGCGGAACGAAAGCAATAGGATTAAAACATACTAAAGTTGCTGGTTGTGTTTGAGAAAGAAGAAATCAAACAGCGACAACACGATCGTGCTTNGGGATATAACGCAAGAACGGCGTCTGTACGATGCTGATCGGTACGAACTTGTCGGTAAAAGGTTNGCCGCTCACGCGTACACGCGCAGGTTCTAAGCCGCAGTAAGATAAGATAATGCNTAGTCCTAATTTACCTGTTTAAATTTGAGCGGACAGGAACTGACA GGAAAAC                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX624723             [                                                                                                                            ATGCATTATGGAGAAACTGGAGACAACACTGGACGCACGGTGCTGTCTCACCGTACGGGGTGGGAATTATTAATTTAGAACGTGAGGGTACAACAAGCTGTAAATATTCGATTCCTGTGTAGGCAGTGGCACCGTCGGTGAGAGAGCACACGAGAGCAAACACTGGGGTTTATTCATGTTTTTAGCAGCGGGTTTTCTTTTTGTAATTTTAAGCGACAGTTTACACTAATAGCACAAAATTGAACGCTCAACAAATTAGACACTAATTAACGCTTGACGAGATACTAATAGAAACGCGTGTGCACCGGGAGAATATTTCAGCGTGCGAAACGAAAAGGAAAATTCATTTTACTTGGGCAGTTTAAGAACACGCGGAACGAAAGCAATAGGATTAAAACATACTAAAGTTGCTGGTTGTGTTTGAGAAA AA AAATCAAACA C ACAACACGATCGTGCTTTGGGATATAA GCAAGAAC GCGTCTGTACGATGCTGATCGGTACGAACTTGTCGGTAAAAGGTT G CGCTCACGCGTACACGCGCA GCTCT AGCCGCAGTAAGATAAGATAATGC TAGT CTAA TTA CTGTTTAA  TTGAGCGGACAAGAACTGACAGGGAAAACGGAAAGCGCCCAATAGGACAGAGGCACCCAGCGAGCCGATGCGGCGATATGG                                                                                                                                                                                                                                                 ]
[+] EMBL BM622128             [                                                                                                                                                                                                                                                                                                                                                                                              ccgACTAATTAACGCTTGACGAGATACTAATAGAAACGCGTGTGCACCGGGAGAATATTTCAGCGTGCGAAACGAAAAGGAAAATTCATTTTACTTGGGCAGTTTAAGAACACGCGGAACGAAAGCAATAGGATTAAAACATA  AAAGTTGCTGGTTGTGTTTGAGAAA AA AAATCAAACA C ACAACACGATCGTGCTTTGGGATATAA GCAAGAAC GCGTCTGTACGATGCTGATCGGTACGAACTTGTCGGTAAAAGGTT G CGCTCACGCGTACACGCGCA GCTCT AGCCGCAGTAAGATAAGATAATGC TAGT CTAA TTA CTGTTTAA  TTGAGCGGACAAGAACTGACAGGGAAAACGGAAAGCGCCCAATAGGACAGAGGCACCCAGCGAGCCGATGCGGCGATATGGAGGCAATCGAGGCCACTAAAGCCTTCCGCCGCGCGCTTACACTAACAGGGGGAGAGGCAAAGAAATTACTGATCGTAAACTCCTTCAATGGGACCACGAATCACCGGATCCGCAAATGTGAGGAATAAAATAAAGCATCATTAATAGCATTAACGACCGATAAATAGTGTAAAAGGGTGGCCCCATCGGTGGCCGTCGCGCTAACGCCAGCAATAATTGTGAAATTGTGCGAAAATCTAGG]


>consensus_6637#0 TCGCCCGAGGTTAAAAGCAAACAAATACGGACTGCCGTGCTCGGCGGGCTGAAGTGGACG AATCGGCGCGAACGACGCTATGTCACACTTCCATTTTGGCCATCGCCGACCGTGGACGGT CCTATGCATTATGGAGAAACTGGAGACAACACTGGACGCACGGTGCTGTCTCACCGTACG GGGTGGGAATTATTAATTTAGAACGTGAGGGTACAACAAGCTGTAAATATTCGATTCCTG TGTAGGCAGTGGCACCGTCGGTGAGAGAGCACACGAGAGCAAACACTGGGGTTTATTCAT GTTTTTAGCAGCGGGTTTTCTTTTTGTAATTTTAAGCGACAGTTTACACTAATAGCACAA AATTGAACGCTCAACAAATTAGACACTAATTAACGCTTGACGAGATACTAATAGAAACGC GTGTGCACCGGGAGAATATTTCAGCGTGCGAAACGAAAAGGAAAATTCATTTTACTTGGG CAGTTTAAGAACACGCGGAACGAAAGCAATAGGATTAAAACATACTAAAGTTGCTGGTTG TGTTTGAGAAAAAAAATCAAACACACAACACGATCGTGCTTTGGGATATAAGCAAGAACG CGTCTGTACGATGCTGATCGGTACGAACTTGTCGGTAAAAGGTTGCGCTCACGCGTACAC GCGCAGCTCTAGCCGCAGTAAGATAAGATAATGCTAGTCTAATTACTGTTTAATTGAGCG GACAAGAACTGACAGGGAAAACGGAAAGCGCCCAATAGGACAGAGGCACCCAGCGAGCCG ATGCGGCGATATGGAGGCAATCGAGGCCACTAAAGCCTTCCGCCGCGCGCTTACACTAAC AGGGGGAGAGGCAAAGAAATTACTGATCGTAAACTCCTTCAATGGGACCACGAATCACCG GATCCGCAAATGTGAGGAATAAAATAAAGCATCATTAATAGCATTAACGACCGATAAATA GTGTAAAAGGGTGGCCCCATCGGTGGCCGTCGCGCTAACGCCAGCAATAATTGTGAAATT GTGCGAAAATCTAGG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)