These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6637#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1035 fasta sequence [TCGCCCGAGGTTAAAAGCAAACAAATACGGACTGCCGTGCTCGGCGGGCTGAAGTGGACGAATCGGCGCGA-ACGACGCTATGTCACACTTCCATTTTGGCCATCGCCGACCGTGGACGGTCCTATGCATTATGGAGAAACTGGAGACAACACTGGACGCACGGTGCTGTCTCACCGTACGGGGTGGGAATTATTAATTTAGAACGTGAGGGTACAACAAGCTGTAAATATTCGATTCCTGTGTAGGCAGTGGCACCGTCGGTGAGAGAGCACACGAGAGCAAACACTGGGGTTTATTCATGTTTTTAGCAGCGGGTTTTCTTTTTGTAATTTTAAGCGACAGTTTACACTAATAGCACAAAATTGAACGCTCAACAAATTAGACACTAATTAACGCTTGACGAGATACTAATAGAAACGCGTGTGCACCGGGAGAATATTTCAGCGTGCGAAACGAAAAGGAAAATTCATTTTACTTGGGCAGTTTAAGAACACGCGGAACGAAAGCAATAGGATTAAAACATACTAAAGTTGCTGGTTGTGTTTGAGAAA-AA-AAATCAAACA-C-ACAACACGATCGTGCTTTGGGATATAA-GCAAGAAC-GCGTCTGTACGATGCTGATCGGTACGAACTTGTCGGTAAAAGGTT-G-CGCTCACGCGTACACGCGCA-GCTCT-AGCCGCAGTAAGATAAGATAATGC-TAGT-CTAA-TTA-CTGTTTAA--TTGAGCGGACAAGAACTGACAGGGAAAACGGAAAGCGCCCAATAGGACAGAGGCACCCAGCGAGCCGATGCGGCGATATGGAGGCAATCGAGGCCACTAAAGCCTTCCGCCGCGCGCTTACACTAACAGGGGGAGAGGCAAAGAAATTACTGATCGTAAACTCCTTCAATGGGACCACGAATCACCGGATCCGCAAATGTGAGGAATAAAATAAAGCATCATTAATAGCATTAACGACCGATAAATAGTGTAAAAGGGTGGCCCCATCGGTGGCCGTCGCGCTAACGCCAGCAATAATTGTGAAATTGTGCGAAAATCTAGG] [+] EMBL AL930829 [TCGCCCGAGGTTAAAAGCAAACAAATACGGACTGCCGTGCTCGGCGGGCTGAAGTGGACGAATCGGCGCGA ACGACGCTATGTCACACTTCCATTTTGGCCATCGCCGACCGTGGACGGTCCTATGCATTATGGAGAAACTGGAGACAACACTGGACGCACGGTGCTGTCTCACCGTACGGGGTGGGAATTATTAATTTAGAACGTGAGGGTACAACAAGCTGTAAATATTCGATTCCTGTGTAGGCAGTGGCACCGTCGGTGAGAGAGCACACGAGAGCAAACACTGGGGTTTATTCATGTTTTTAGCAGCGGGTTTTCTTTTTGTAATTTTAAGCGACAGTTTACACTAATAGCACAAAATTGAACGCTCAACAAATTAGACACTAATTAACGCTTGACGAGATACTAATAGAAACGCGTGTGCACCGGGAGAATATT ] [+] EMBL BX624950 [ CTGCCGTGCTCGGCGGGCTGAAGTGGACGAATCGGCGCGA ACGACGCTATGTCACACTTCCATTTTGGCCATCGCCGACCGTGGACGGTCCTATGCATTATGGAGAAACTGGAGACAACACTGGACGCACGGTGCTGTCTCACCGTACGGGGTGGGAATTATTAATTTAGAACGTGAGGGTACAACAAGCTGTAAATATTCGATTCCTGTGTAGGCAGTGGCACCGTCGGTGAGAGAGCACACGAGAGCAAACACTGGGGTTTATTCATGTTTTTAGCAGCGGGTTTTCTTTTTGTAATTTTAAGCGACAGTTTACACTAATAGCACAAAATTGAACGCTCAACAAATTAGACACTAATTAACGCTTGACGAGATACTAATAGAAACGCGTGTGCACCGGGAGAATATTTCAGCGTGCGAAACGAAAAGGAAAATTCATTTTACTTGGGCAGTTTAAGAACACGCGGAACGAAAGCAATAGGATTAAAACATACTAAAGTTGCTGGTTGTGTTTGAGAAA AA AAATCAAACA C ACAACACGATCGTGCTTTGGGATATAA GCAAGAAC GCGTCTGTACGATGCTGATCGGTACGAACTTGTCGGTAAAAGGGT G CGCTCACGCGTACACGCGCA GCTCT AGCCGCAGTAAGATAAGATAATGC TAGT CTAA TTA CTGGTTAA TTGAGCGGACNAGAACTGACAGGGAAAACGGAAAGCGCCCAATAGGACAGANGCACCCAGCGAGCCGATGCn ] [+] EMBL BX467962 [ gccaGAATCNCCACGAGNCGACGCTATGTCACACTTCCATTTTGGCCATCGCCGACCGTGGACGGTCCTATGCATTATGGAGAAACTGGAGACAACACTGGACGCACGGTGCTGTCTCACCGTACGGGGTGGGAATTATTAATTTAGAACGTGAGGGTACAACAAGCTGTAAATATTCGATTCCTGTGTAGGCAGTGGCACCGTCGGTGAGAGAGCACACGAGAGCAAACACTGGGGTTTATTCATGTTTTTAGCAGCGGGTTTTCTTTTTGTAATTTTAAGCGACAGTTTACACTAATAGCACAAAATTGAACGCTCAACAAATTAGACACTAATTAACGCTTGACGAGATACTAATAGAAACGCGTGTGCACCGGGAGAATATTTCAGCGTGCGAAACGAAAAGGAAAATTCATTTTACTTGGGCAGTTTAAGAACACGCGGAACGAAAGCAATAGGATTAAAACATACTAAAGTTGCTGGTTGTGTTTGAGAAAGAAGAAATCAAACAGCGACAACACGATCGTGCTTNGGGATATAACGCAAGAACGGCGTCTGTACGATGCTGATCGGTACGAACTTGTCGGTAAAAGGTTNGCCGCTCACGCGTACACGCGCAGGTTCTAAGCCGCAGTAAGATAAGATAATGCNTAGTCCTAATTTACCTGTTTAAATTTGAGCGGACAGGAACTGACA GGAAAAC ] [+] EMBL BX624723 [ ATGCATTATGGAGAAACTGGAGACAACACTGGACGCACGGTGCTGTCTCACCGTACGGGGTGGGAATTATTAATTTAGAACGTGAGGGTACAACAAGCTGTAAATATTCGATTCCTGTGTAGGCAGTGGCACCGTCGGTGAGAGAGCACACGAGAGCAAACACTGGGGTTTATTCATGTTTTTAGCAGCGGGTTTTCTTTTTGTAATTTTAAGCGACAGTTTACACTAATAGCACAAAATTGAACGCTCAACAAATTAGACACTAATTAACGCTTGACGAGATACTAATAGAAACGCGTGTGCACCGGGAGAATATTTCAGCGTGCGAAACGAAAAGGAAAATTCATTTTACTTGGGCAGTTTAAGAACACGCGGAACGAAAGCAATAGGATTAAAACATACTAAAGTTGCTGGTTGTGTTTGAGAAA AA AAATCAAACA C ACAACACGATCGTGCTTTGGGATATAA GCAAGAAC GCGTCTGTACGATGCTGATCGGTACGAACTTGTCGGTAAAAGGTT G CGCTCACGCGTACACGCGCA GCTCT AGCCGCAGTAAGATAAGATAATGC TAGT CTAA TTA CTGTTTAA TTGAGCGGACAAGAACTGACAGGGAAAACGGAAAGCGCCCAATAGGACAGAGGCACCCAGCGAGCCGATGCGGCGATATGG ] [+] EMBL BM622128 [ ccgACTAATTAACGCTTGACGAGATACTAATAGAAACGCGTGTGCACCGGGAGAATATTTCAGCGTGCGAAACGAAAAGGAAAATTCATTTTACTTGGGCAGTTTAAGAACACGCGGAACGAAAGCAATAGGATTAAAACATA AAAGTTGCTGGTTGTGTTTGAGAAA AA AAATCAAACA C ACAACACGATCGTGCTTTGGGATATAA GCAAGAAC GCGTCTGTACGATGCTGATCGGTACGAACTTGTCGGTAAAAGGTT G CGCTCACGCGTACACGCGCA GCTCT AGCCGCAGTAAGATAAGATAATGC TAGT CTAA TTA CTGTTTAA TTGAGCGGACAAGAACTGACAGGGAAAACGGAAAGCGCCCAATAGGACAGAGGCACCCAGCGAGCCGATGCGGCGATATGGAGGCAATCGAGGCCACTAAAGCCTTCCGCCGCGCGCTTACACTAACAGGGGGAGAGGCAAAGAAATTACTGATCGTAAACTCCTTCAATGGGACCACGAATCACCGGATCCGCAAATGTGAGGAATAAAATAAAGCATCATTAATAGCATTAACGACCGATAAATAGTGTAAAAGGGTGGCCCCATCGGTGGCCGTCGCGCTAACGCCAGCAATAATTGTGAAATTGTGCGAAAATCTAGG] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||