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Anopheles gambiae
cluster # 6679 cluster # 6679       Sequences # 5       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6679#0 length = 832 sequences # 1  
consensus_6679#1 length = 731 sequences # 1  
consensus_6679#2 length = 614 sequences # 1  
consensus_6679#3 length = 562 sequences # 1  
consensus_6679#4 length = 375 sequences # 1  

consensusID : consensus_6679#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 832
fasta sequence
                              [AGAATCCCCCGAGGCTCATTGTCGCGTGAGGGGGCCTCCCCGTTTTTGTCTCTGTGAGAAAACACGCAGTACAAAAACGTTTCCTTTATTTTTTTGTTTGTTTCGTGGGAAAACAATGACCGTGCGTTGTTAGTGTGCCCGGATAGGATCGGTGGGCAAAATAGGTGCAGTGTCGGTTGCGGTGTTTGCTATTATCGCCCTTTGCCCTTGTGCTCCTGCCAGTGCGCGCTGTGTTGTTTATTAATTTGAACCAAATTTTGTGCAACGCGTACGCAACCGAGCTGCTGGGCATTGTGGCACACACGGAGGATCTGCTGCGCGATCAAACTCAGGTGAACCTGGCAACCGAGCGCGGTCTGATTATCTTCTGCTGGGGCGATGACAATAACTGTAAGGATACGATAAAGCATTTAAAGAGCCTTGGTATCCATGCCATCATCTACGACAAGATGGATATATACTCGGACAAGGCGGTCAAGGAGAGCGTATTTCTAGTTGGTGCCCGTGAATCGCAAGCTGCGCTGCTGCAGCAGATCAACATCGAGAACCGTTACGAGCAGACGAATCAGCATGATTTTCTCAACGACAAGGACGTTCGGCTCAGCCTGACAAGTCGGGCTCATCCAACGTCTACTCCTTCGATTTGAGTTTTCACGGTGATTTGGTCTTTCCGGCTTCGGTGATAATGCAACAAACGATGGATGGTTCCATAGCTGGAAACGGGAGTGTGCGTTAATTGGTTCCCTGTCGAGTTTAACAATTCTGCTGAACTAGTCATTACTTTGATCGGGCTACGGGCATTACCAAGTGCTGATTCAGCCTGCCTTTCANT]

[+] EMBL AL934831             [AGAATCCCCCGAGGCTCATTGTCGCGTGAGGGGGCCTCCCCGTTTTTGTCTCTGTGAGAAAACACGCAGTACAAAAACGTTTCCTTTATTTTTTTGTTTGTTTCGTGGGAAAACAATGACCGTGCGTTGTTAGTGTGCCCGGATAGGATCGGTGGGCAAAATAGGTGCAGTGTCGGTTGCGGTGTTTGCTATTATCGCCCTTTGCCCTTGTGCTCCTGCCAGTGCGCGCTGTGTTGTTTATTAATTTGAACCAAATTTTGTGCAACGCGTACGCAACCGAGCTGCTGGGCATTGTGGCACACACGGAGGATCTGCTGCGCGATCAAACTCAGGTGAACCTGGCAACCGAGCGCGGTCTGATTATCTTCTGCTGGGGCGATGACAATAACTGTAAGGATACGATAAAGCATTTAAAGAGCCTTGGTATCCATGCCATCATCTACGACAAGATGGATATATACTCGGACAAGGCGGTCAAGGAGAGCGTATTTCTAGTTGGTGCCCGTGAATCGCAAGCTGCGCTGCTGCAGCAGATCAACATCGAGAACCGTTACGAGCAGACGAATCAGCATGATTTTCTCAACGACAAGGACGTTCGGCTCAGCCTGACAAGTCGGGCTCATCCAACGTCTACTCCTTCGATTTGAGTTTTCACGGTGATTTGGTCTTTCCGGCTTCGGTGATAATGCAACAAACGATGGATGGTTCCATAGCTGGAAACGGGAGTGTGCGTTAATTGGTTCCCTGTCGAGTTTAACAATTCTGCTGAACTAGTCATTACTTTGATCGGGCTACGGGCATTACCAAGTGCTGATTCAGCCTGCCTTTCANT]


>consensus_6679#0 AGAATCCCCCGAGGCTCATTGTCGCGTGAGGGGGCCTCCCCGTTTTTGTCTCTGTGAGAA AACACGCAGTACAAAAACGTTTCCTTTATTTTTTTGTTTGTTTCGTGGGAAAACAATGAC CGTGCGTTGTTAGTGTGCCCGGATAGGATCGGTGGGCAAAATAGGTGCAGTGTCGGTTGC GGTGTTTGCTATTATCGCCCTTTGCCCTTGTGCTCCTGCCAGTGCGCGCTGTGTTGTTTA TTAATTTGAACCAAATTTTGTGCAACGCGTACGCAACCGAGCTGCTGGGCATTGTGGCAC ACACGGAGGATCTGCTGCGCGATCAAACTCAGGTGAACCTGGCAACCGAGCGCGGTCTGA TTATCTTCTGCTGGGGCGATGACAATAACTGTAAGGATACGATAAAGCATTTAAAGAGCC TTGGTATCCATGCCATCATCTACGACAAGATGGATATATACTCGGACAAGGCGGTCAAGG AGAGCGTATTTCTAGTTGGTGCCCGTGAATCGCAAGCTGCGCTGCTGCAGCAGATCAACA TCGAGAACCGTTACGAGCAGACGAATCAGCATGATTTTCTCAACGACAAGGACGTTCGGC TCAGCCTGACAAGTCGGGCTCATCCAACGTCTACTCCTTCGATTTGAGTTTTCACGGTGA TTTGGTCTTTCCGGCTTCGGTGATAATGCAACAAACGATGGATGGTTCCATAGCTGGAAA CGGGAGTGTGCGTTAATTGGTTCCCTGTCGAGTTTAACAATTCTGCTGAACTAGTCATTA CTTTGATCGGGCTACGGGCATTACCAAGTGCTGATTCAGCCTGCCTTTCANT



consensusID : consensus_6679#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 731
fasta sequence
                              [CGAGGTTTNAGCATGATTTTCTCAACGACCAGGACGTTCGGCTCAGCCTGGACAAGTCGGGCTCATCCAACTCTACTCCTTCGATTCTGAGTTTTCACGTGATTTTGTCTTTCCGGCTTTCGGTGATAATGAAAAAAGATGGATGGTATCCATAGCTGGAAACGGCGAGCTGTGCGTAATTGGTTCCCTGCTTGATTTAACAATTTTGCTGAATAGCTTATTACTTTCTTCATATCGGTATTGGCATACAAGTGTGTTTNTCTGCTTATTTTCCAACTTACGCTATAATATTCATATGTGTCTCTGTCATACGAAACTTTCNCCCNCTATACATAAATCTCGNNCCGGAGTGCTGTCGTTGTGTGCCGAGTGCGCATGACGCTGCCGGTATTTTNTCGCAATCTCTAATTTTACCAAGCAAATATTGAAATACTTGGCTATCTCCTGCNCACTTACCTTACGAACAAGCCGCTAGCGGGCAGCANTTGACGAACTCTACACACTTTTGCAACTGTACCTTACAACCNCACAGGCGCCTAAACCATTAATTNAAACAAACCCAACAAACCAAACCCACTCCAACCAACCAACCCTCAAAGGCAATGCCAGGGGTTTCCCACACACGCATCAACACTGNGGCACACANACCAAGGACANCACTNTCTCACTTAACCCTTAAATCATCATTTAATTAAGGCANTTTACAACACAACCAACCCAAAATTCCCCCT]

[+] EMBL AL695969             [CGAGGTTTNAGCATGATTTTCTCAACGACCAGGACGTTCGGCTCAGCCTGGACAAGTCGGGCTCATCCAACTCTACTCCTTCGATTCTGAGTTTTCACGTGATTTTGTCTTTCCGGCTTTCGGTGATAATGAAAAAAGATGGATGGTATCCATAGCTGGAAACGGCGAGCTGTGCGTAATTGGTTCCCTGCTTGATTTAACAATTTTGCTGAATAGCTTATTACTTTCTTCATATCGGTATTGGCATACAAGTGTGTTTNTCTGCTTATTTTCCAACTTACGCTATAATATTCATATGTGTCTCTGTCATACGAAACTTTCNCCCNCTATACATAAATCTCGNNCCGGAGTGCTGTCGTTGTGTGCCGAGTGCGCATGACGCTGCCGGTATTTTNTCGCAATCTCTAATTTTACCAAGCAAATATTGAAATACTTGGCTATCTCCTGCNCACTTACCTTACGAACAAGCCGCTAGCGGGCAGCANTTGACGAACTCTACACACTTTTGCAACTGTACCTTACAACCNCACAGGCGCCTAAACCATTAATTNAAACAAACCCAACAAACCAAACCCACTCCAACCAACCAACCCTCAAAGGCAATGCCAGGGGTTTCCCACACACGCATCAACACTGNGGCACACANACCAAGGACANCACTNTCTCACTTAACCCTTAAATCATCATTTAATTAAGGCANTTTACAACACAACCAACCCAAAATTCCCCCT]


>consensus_6679#1 CGAGGTTTNAGCATGATTTTCTCAACGACCAGGACGTTCGGCTCAGCCTGGACAAGTCGG GCTCATCCAACTCTACTCCTTCGATTCTGAGTTTTCACGTGATTTTGTCTTTCCGGCTTT CGGTGATAATGAAAAAAGATGGATGGTATCCATAGCTGGAAACGGCGAGCTGTGCGTAAT TGGTTCCCTGCTTGATTTAACAATTTTGCTGAATAGCTTATTACTTTCTTCATATCGGTA TTGGCATACAAGTGTGTTTNTCTGCTTATTTTCCAACTTACGCTATAATATTCATATGTG TCTCTGTCATACGAAACTTTCNCCCNCTATACATAAATCTCGNNCCGGAGTGCTGTCGTT GTGTGCCGAGTGCGCATGACGCTGCCGGTATTTTNTCGCAATCTCTAATTTTACCAAGCA AATATTGAAATACTTGGCTATCTCCTGCNCACTTACCTTACGAACAAGCCGCTAGCGGGC AGCANTTGACGAACTCTACACACTTTTGCAACTGTACCTTACAACCNCACAGGCGCCTAA ACCATTAATTNAAACAAACCCAACAAACCAAACCCACTCCAACCAACCAACCCTCAAAGG CAATGCCAGGGGTTTCCCACACACGCATCAACACTGNGGCACACANACCAAGGACANCAC TNTCTCACTTAACCCTTAAATCATCATTTAATTAAGGCANTTTACAACACAACCAACCCA AAATTCCCCCT



consensusID : consensus_6679#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 614
fasta sequence
                              [CCCCAGGTTTATTCTGCTGGGGCGATGACACTAACTGTAAGGATACTATAAAGCATTTAAAGAGCCTTGGTATCCCATGCCATCATCTACGACAAGATGGATATATACTCGGACAAGGCGGTCAAGGAGAGCGTATTTTTAGTTGGTGCCCGTGAATCCGCAAGCTGCGCTGCTGCAGCAGATCAACATCGAGAACCGTTACGAGCCAGACGAATCAGCACGATTTTCTCAACGACAAGGACGTGCGGCTCAGCCTGGACAAGTCGCAGCTCATCCAACTCTACTCCTTCGCATTTGAGTTTTCACGTGATTNAAGTAGTATATCCAGCCTTTCCGGTTATAATGAAAAAAGATGGATGGTTCCATAGCTGGAAACGGGAGTGTGCGTAATTGGTTCACTNGTTGATTTAAAATTTTGCTGAATAGTTATTTACTCTTNNAAAGGTATAAGGCCATACAAGATGTGTTATATACTCTNGCCTTAATCACATCCAATTAGGCTATAATATTCATTGTGTTCTGTATAAGAAACTTTAATATACATAAATTGAACGGAGTGTGTGTGTGTGCGAGGTGCAATGAGTGAGTATATACGAATTTATTTACAACATAAT]

[+] EMBL AL697605             [CCCCAGGTTTATTCTGCTGGGGCGATGACACTAACTGTAAGGATACTATAAAGCATTTAAAGAGCCTTGGTATCCCATGCCATCATCTACGACAAGATGGATATATACTCGGACAAGGCGGTCAAGGAGAGCGTATTTTTAGTTGGTGCCCGTGAATCCGCAAGCTGCGCTGCTGCAGCAGATCAACATCGAGAACCGTTACGAGCCAGACGAATCAGCACGATTTTCTCAACGACAAGGACGTGCGGCTCAGCCTGGACAAGTCGCAGCTCATCCAACTCTACTCCTTCGCATTTGAGTTTTCACGTGATTNAAGTAGTATATCCAGCCTTTCCGGTTATAATGAAAAAAGATGGATGGTTCCATAGCTGGAAACGGGAGTGTGCGTAATTGGTTCACTNGTTGATTTAAAATTTTGCTGAATAGTTATTTACTCTTNNAAAGGTATAAGGCCATACAAGATGTGTTATATACTCTNGCCTTAATCACATCCAATTAGGCTATAATATTCATTGTGTTCTGTATAAGAAACTTTAATATACATAAATTGAACGGAGTGTGTGTGTGTGCGAGGTGCAATGAGTGAGTATATACGAATTTATTTACAACATAAT]


>consensus_6679#2 CCCCAGGTTTATTCTGCTGGGGCGATGACACTAACTGTAAGGATACTATAAAGCATTTAA AGAGCCTTGGTATCCCATGCCATCATCTACGACAAGATGGATATATACTCGGACAAGGCG GTCAAGGAGAGCGTATTTTTAGTTGGTGCCCGTGAATCCGCAAGCTGCGCTGCTGCAGCA GATCAACATCGAGAACCGTTACGAGCCAGACGAATCAGCACGATTTTCTCAACGACAAGG ACGTGCGGCTCAGCCTGGACAAGTCGCAGCTCATCCAACTCTACTCCTTCGCATTTGAGT TTTCACGTGATTNAAGTAGTATATCCAGCCTTTCCGGTTATAATGAAAAAAGATGGATGG TTCCATAGCTGGAAACGGGAGTGTGCGTAATTGGTTCACTNGTTGATTTAAAATTTTGCT GAATAGTTATTTACTCTTNNAAAGGTATAAGGCCATACAAGATGTGTTATATACTCTNGC CTTAATCACATCCAATTAGGCTATAATATTCATTGTGTTCTGTATAAGAAACTTTAATAT ACATAAATTGAACGGAGTGTGTGTGTGTGCGAGGTGCAATGAGTGAGTATATACGAATTT ATTTACAACATAAT



consensusID : consensus_6679#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 562
fasta sequence
                              [CCGGCCTCGCGTTTTTGTCTCTGTGAGAAAACACGCAGTACAAAAACGTTTCCTTTATTTTTAGTGTTTGTTTCGTGGGAAAACAATGACCGTACGTTGTTAGTGTGCCCGGATAGGATCGGTGGGCAAAATAGGTGCAGTGTCGGTTGCGGTGTTTGCTATTATCGCCCTTTGCCCTTGTGCTCCTGCCAGTGCGCGCTGTGTTGTTTATTAATTTGAACCAAATTTTGTGCAACAACAAAGAAGTCTGTGTGAGTGTGCGCGCCAGTTGTGCAAAGACTGGCATTTTCTTATCGTACCAAAGGGCCCAGTGTGTTTGTGCAAAGGGAAGAAACAAACGTAAACAAAGGATCGCTCGCGACACAAATCGTCTTCCAATTTTGCCCACGATACCAAAGAAGTGCTTTTGATAAGTTGTTCGTAGAAAACACACACAACAGACAACAAACAAAATGCAGCGCTGGTGGTTTTTAGAAGAAAATGCTGAAGGAAAGGATCCATCGTCGTCCACCGCCTCGCAGAAGTCGGAAGCGTCCGTGAAAAAAACCAAAGCAATCCACGA]

[+] EMBL BM598869             [CCGGCCTCGCGTTTTTGTCTCTGTGAGAAAACACGCAGTACAAAAACGTTTCCTTTATTTTTAGTGTTTGTTTCGTGGGAAAACAATGACCGTACGTTGTTAGTGTGCCCGGATAGGATCGGTGGGCAAAATAGGTGCAGTGTCGGTTGCGGTGTTTGCTATTATCGCCCTTTGCCCTTGTGCTCCTGCCAGTGCGCGCTGTGTTGTTTATTAATTTGAACCAAATTTTGTGCAACAACAAAGAAGTCTGTGTGAGTGTGCGCGCCAGTTGTGCAAAGACTGGCATTTTCTTATCGTACCAAAGGGCCCAGTGTGTTTGTGCAAAGGGAAGAAACAAACGTAAACAAAGGATCGCTCGCGACACAAATCGTCTTCCAATTTTGCCCACGATACCAAAGAAGTGCTTTTGATAAGTTGTTCGTAGAAAACACACACAACAGACAACAAACAAAATGCAGCGCTGGTGGTTTTTAGAAGAAAATGCTGAAGGAAAGGATCCATCGTCGTCCACCGCCTCGCAGAAGTCGGAAGCGTCCGTGAAAAAAACCAAAGCAATCCACGA]


>consensus_6679#3 CCGGCCTCGCGTTTTTGTCTCTGTGAGAAAACACGCAGTACAAAAACGTTTCCTTTATTT TTAGTGTTTGTTTCGTGGGAAAACAATGACCGTACGTTGTTAGTGTGCCCGGATAGGATC GGTGGGCAAAATAGGTGCAGTGTCGGTTGCGGTGTTTGCTATTATCGCCCTTTGCCCTTG TGCTCCTGCCAGTGCGCGCTGTGTTGTTTATTAATTTGAACCAAATTTTGTGCAACAACA AAGAAGTCTGTGTGAGTGTGCGCGCCAGTTGTGCAAAGACTGGCATTTTCTTATCGTACC AAAGGGCCCAGTGTGTTTGTGCAAAGGGAAGAAACAAACGTAAACAAAGGATCGCTCGCG ACACAAATCGTCTTCCAATTTTGCCCACGATACCAAAGAAGTGCTTTTGATAAGTTGTTC GTAGAAAACACACACAACAGACAACAAACAAAATGCAGCGCTGGTGGTTTTTAGAAGAAA ATGCTGAAGGAAAGGATCCATCGTCGTCCACCGCCTCGCAGAAGTCGGAAGCGTCCGTGA AAAAAACCAAAGCAATCCACGA



consensusID : consensus_6679#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 375
fasta sequence
                              [GCGGTCAAGGAGAGCGTATTTTTAGTTGGTGCCCGTGAATCGCAAGCTGCGCTGCTGCAGCAGATCAACATCGAGAACCGTTACGAGCAGACGAATCAGCACGGATTTTCTCAACGGACAAGNACGTTCGGCGCAGCCTGGGACAAGTCGGGCTCATCCAACTCTACTCCTTCGGATTTGAGTTTTCACGTGGATTTTGTCTTTCCGCCTTTCCGGTGATAATGAAAAAANGATGGATGGTTCCATAGCTGGAAACGGGGAGATNGCGTAAACGGTTCCCTGTTGATTTAAAAATTTGCTGAATAGTNATNACTTTTTTTTTTTGGGTTTGGCATACAAGTGTGTTTTTCTGCTTTTTCCAATGAGCTATAATAT]

[+] EMBL BX624216             [GCGGTCAAGGAGAGCGTATTTTTAGTTGGTGCCCGTGAATCGCAAGCTGCGCTGCTGCAGCAGATCAACATCGAGAACCGTTACGAGCAGACGAATCAGCACGGATTTTCTCAACGGACAAGNACGTTCGGCGCAGCCTGGGACAAGTCGGGCTCATCCAACTCTACTCCTTCGGATTTGAGTTTTCACGTGGATTTTGTCTTTCCGCCTTTCCGGTGATAATGAAAAAANGATGGATGGTTCCATAGCTGGAAACGGGGAGATNGCGTAAACGGTTCCCTGTTGATTTAAAAATTTGCTGAATAGTNATNACTTTTTTTTTTTGGGTTTGGCATACAAGTGTGTTTTTCTGCTTTTTCCAATGAGCTATAATAT]


>consensus_6679#4 GCGGTCAAGGAGAGCGTATTTTTAGTTGGTGCCCGTGAATCGCAAGCTGCGCTGCTGCAG CAGATCAACATCGAGAACCGTTACGAGCAGACGAATCAGCACGGATTTTCTCAACGGACA AGNACGTTCGGCGCAGCCTGGGACAAGTCGGGCTCATCCAACTCTACTCCTTCGGATTTG AGTTTTCACGTGGATTTTGTCTTTCCGCCTTTCCGGTGATAATGAAAAAANGATGGATGG TTCCATAGCTGGAAACGGGGAGATNGCGTAAACGGTTCCCTGTTGATTTAAAAATTTGCT GAATAGTNATNACTTTTTTTTTTTGGGTTTGGCATACAAGTGTGTTTTTCTGCTTTTTCC AATGAGCTATAATAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6679#2      CCCCAGGTTTATTCTGCTGGGGCGATGACACTAACTGTAAGGATACTATAAAGCATTTAA 60
consensus_6679#4      ------------------------------------------------------------
consensus_6679#1      ------------------------------------------------------------
consensus_6679#0      ------------------------------------------------------------
consensus_6679#3      ------------------------------------------------------------
                                                                                  

consensus_6679#2      AGAGCCTTGGTATCCCATGCCATCATCTACGACAAGATGGATATATACTCGGACAAGGCG 120
consensus_6679#4      ---------------------------------------------------------GCG 3
consensus_6679#1      ------------------------------------------------------------
consensus_6679#0      --------------------------------------AGAATCCCCCGAGGCTCATTGT 22
consensus_6679#3      ------------------------------------------------------------
                                                                                  

consensus_6679#2      GTCAAGGAGAGCGTATTTTTAGTTGGTGCCCGTGAATCCGCAAGCTGCGCTGCTGCAGCA 180
consensus_6679#4      GTCAAGGAGAGCGTATTTTTAGTTGGTGCCCGTGAATC-GCAAGCTGCGCTGCTGCAGCA 62
consensus_6679#1      ------------------------------------------------------------
consensus_6679#0      CGCGTGAGGGGGCCTCCCCGTTTTTGTCTCTGTGAGAAAACACGCAGTACAAAAACGTTT 82
consensus_6679#3      ---------CCGGCCTCGCGTTTTTGTCTCTGTGAGAAAACACGCAGTACAAAAACGTTT 51
                                                                                  

consensus_6679#2      GATCAACATCGAG-AACCGTTACGAGCCAGACGAATCAGCACG-ATTTTC----TCAACG 234
consensus_6679#4      GATCAACATCGAG-AACCGTTACGAGC-AGACGAATCAGCACGGATTTTC----TCAACG 116
consensus_6679#1      ----------------------------CGAGGTTTNAGCATG-ATTTTC----TCAACG 27
consensus_6679#0      CCTTTATTTTTTT-GTTTGTTTCGTGGGAAAACAATGACCGTGCGTTGTTAGTGTGCCCG 141
consensus_6679#3      CCTTTATTTTTAGTGTTTGTTTCGTGGGAAAACAATGACCGTACGTTGTTAGTGTGCCCG 111
                                                    *    * * *     ** *     *   **

consensus_6679#2      -ACAAGGACGTGCGGC----TCAGCCTGG-ACAAGTCGCAGCTCATCCAACTCTACTCCT 288
consensus_6679#4      GACAAGNACGTTCGGC----GCAGCCTGGGACAAGTCG-GGCTCATCCAACTCTACTCCT 171
consensus_6679#1      -ACCAGGACGTTCGGC----TCAGCCTGG-ACAAGTCG-GGCTCATCCAACTCTACTCCT 80
consensus_6679#0      GATAGGATCGGTGGGCAAAATAGGTGCAGTGTCGGTTGCGGTGTTTGCTATTATCGCCCT 201
consensus_6679#3      GATAGGATCGGTGGGCAAAATAGGTGCAGTGTCGGTTGCGGTGTTTGCTATTATCGCCCT 171
                       *   *  **   ***       *    *     ** *  *    * * * * *   ***

consensus_6679#2      TCGCATTTGAGTTTTCACGTGATTNAAGTAGTATA-TCCAGCCTTTCCGGTTATAATGAA 347
consensus_6679#4      TCGGATTTGAGTTTTCACGTGGATT---TTGTCTT-TCC-GCCTTTCCGGTGATAATGAA 226
consensus_6679#1      TCGATTCTGAGTTTTCACGTGATTT----TGTCTT-TCCGGC--TTTCGGTGATAATGAA 133
consensus_6679#0      TTGCCCTTGTGCTCCTGC-CAGTGCGCGCTGTGTTGTTTATTAATTTGAACCAAATTTTG 260
consensus_6679#3      TTGCCCTTGTGCTCCTGC-CAGTGCGCGCTGTGTTGTTTATTAATTTGAACCAAATTTTG 230
                      * *    ** * *    *            ** *  *       **      * * *   

consensus_6679#2      AAAAG-ATGGATGGT-TCCA-TAGCTGGAAACGGG-AG-TGTGCGTAATTGGTTCACTNG 402
consensus_6679#4      AAAANGATGGATGGT-TCCA-TAGCTGGAAACGGGGAG-ATNGCGTAAACGGTTC-CCTG 282
consensus_6679#1      AAAAG-ATGGATGGTATCCA-TAGCTGGAAACGGCGAGCTGTGCGTAATTGGTTCCCTGC 191
consensus_6679#0      TGCAACGCGTACGCAACCGAGCTGCTGGGCATTGT--GGCACACACGGAGGATCTGCTGC 318
consensus_6679#3      TGCAACAACAAAGAAGTCTG-----TGTGAGTG------TGCGCGCCAGTTGTGCAAAGA 279
                         *      * *    *       **                *        *       

consensus_6679#2      TTGATTTAA---AATTTTGCTGAATAG-TTATTTACTCTTNNAAAGG----TATAAGGCC 454
consensus_6679#4      TTGATTTAA---AAATTTGCTGAATAG-TNATNACTTTTTTTTTTTG----GGTTTGGC- 333
consensus_6679#1      TTGATTTAAC--AATTTTGCTGAATAGCTTATTACTTTCTTCATATC----GGTATTGGC 245
consensus_6679#0      GCGATCAAACTCAGGTGAACCTGGCAACCGAGCGCGGTCTGATTATCTTCTGCTGGGGCG 378
consensus_6679#3      CTGGCATTTTCTTATCGTACCAAAGGGCCCAGTGTGTTTGTGCAAAGGGAAGAAACAAAC 339
                        *                *          *                             

consensus_6679#2      AT--ACAAGATGTGTTATATACTCTNGCCTTAATCACATCCAA-TTAGGCTATAATATTC 511
consensus_6679#4      AT--ACAAG-TGTGTT-----TTTCTGCTTT-------TTCCA-ATGAGCTATAATAT-- 375
consensus_6679#1      AT--ACAAG-TGTGTT-----TNTCTGCTTATTT----TCCAACTTACGCTATAATATTC 293
consensus_6679#0      ATG-ACAATAACTGTAA---GGATACGATAAAGC---ATTTAA--AGAGCCTTGGTATCC 429
consensus_6679#3      GTAAACAAAGGATCGCTCGCGACACAAATCGTCT----TCCAATTTTGCCCACGATAC-C 394
                       *  ****    *                         *   *      *     **   

consensus_6679#2      AT---TGTGTTCTGTATAAGAAACTTTAATATAC-ATAAATTGAACG-GAGTGTGTGTGT 566
consensus_6679#4      ------------------------------------------------------------
consensus_6679#1      ATATGTGTCTCTGTCATACGAAACTTTCNCCCNCTATACATAAATCTCGNNCCGGAGTGC 353
consensus_6679#0      ATGCCATCATCTACGACAAGATGGATATATACTCGGACAAGGCGGTCAAGGAGAGCGTAT 489
consensus_6679#3      AAAGAAGTGCTTTTGATAAGTTGTTCGTAGAAAACACACACAACAGACAACAAACAAAAT 454
                                                                                  

consensus_6679#2      GTGCGAGGTGCAATGAGTGAGTAT-A-TACGAATTTATTTACAACATAAT---------- 614
consensus_6679#4      ------------------------------------------------------------
consensus_6679#1      TGTCGTTGTGTGCCGAGTGCGCATGA-CGCTGCCGGTATTTTNTCGCAATCTCTAATTTT 412
consensus_6679#0      TTCTAGTTGGTGCCCGTGAATCGCAAGCTGCGCTGCTGCAGCAGATCAACATCGAGAACC 549
consensus_6679#3      GCAGCGCTGGTGGTTTTTAGAAGAAAATGCTGAAGGAAAGGATCCATCGTCGTCCA--CC 512
                                                                                  

consensus_6679#2      ------------------------------------------------------------
consensus_6679#4      ------------------------------------------------------------
consensus_6679#1      ACCAAGCAAATATTGAAATACTTGGCTATCTCCTGCNCACTTACCTTACGAACAAGCCG- 471
consensus_6679#0      GTTACGAGCAGACGAATCAGCATGATTTTCTCAACGACAAGGACGTTCGGCTCAGCCTGA 609
consensus_6679#3      GCCTCGCAGAAGTCGGAAGCGTCCGTGAAAAAAACCAAAGCAATCCACGA---------- 562
                                                                                  

consensus_6679#2      ------------------------------------------------------------
consensus_6679#4      ------------------------------------------------------------
consensus_6679#1      CTAGCGGGCAGCANTTGACGAACTCTACACACTTTTGCAACTGTACCTTACAACCNCACA 531
consensus_6679#0      CAAGTCGGGCTCATCCAACGTCTACTCCTTCGATTTGAGTTTTCACGGTGATTTGGTCTT 669
consensus_6679#3      ------------------------------------------------------------
                                                                                  

consensus_6679#2      ------------------------------------------------------------
consensus_6679#4      ------------------------------------------------------------
consensus_6679#1      GGCGCCTAAACCATTAATTNAAACAAACCCAACAAACCAAACCCACTCCAACCAACCAAC 591
consensus_6679#0      TCCGGCTTCGGTGATAATGCAACAAACGATGGATGGTTCCATAGCTGGAAACGGGAGTGT 729
consensus_6679#3      ------------------------------------------------------------
                                                                                  

consensus_6679#2      ------------------------------------------------------------
consensus_6679#4      ------------------------------------------------------------
consensus_6679#1      CCTCAAAGGCAATGCCAGGGGTTTCCCACA-CACGCATCAACACTGNGGCACACANACCA 650
consensus_6679#0      GCGTTAATTGGTTCCCTGTCGAGTTTAACAATTCTGCTGAACTAGTCATTACTTTGATCG 789
consensus_6679#3      ------------------------------------------------------------
                                                                                  

consensus_6679#2      ------------------------------------------------------------
consensus_6679#4      ------------------------------------------------------------
consensus_6679#1      AGGACANCACTNTCTCACTTAACCCTTAAATCATCATTTAATTAAGGCANTTTACAACAC 710
consensus_6679#0      GGCTACGGGCATTACCAAGTGCTGATTCAGCCTGCCTTTCANT----------------- 832
consensus_6679#3      ------------------------------------------------------------
                                                                                  

consensus_6679#2      ---------------------
consensus_6679#4      ---------------------
consensus_6679#1      AACCAACCCAAAATTCCCCCT 731
consensus_6679#0      ---------------------
consensus_6679#3      ---------------------
                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)