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Anopheles gambiae
cluster # 6701 cluster # 6701       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6701#0 length = 1450 sequences # 3  
consensus_6701#1 length = 1021 sequences # 1  
consensus_6701#2 length = 910 sequences # 2  

consensusID : consensus_6701#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1450
fasta sequence
                              [GATCACGACCCTTTTCCACTCACTGCAGAAAACAAGCGAATCAGGTACGGTAAGTGATCGTATAACTGACCTGAAGACAAAACTGGAAGAGGTAACTACCATGATCGTCGACCTGGGCAAGCAAACCGATGGTACCGAAAATCTGGGCGACATGGTGGAGTCCGAGCTGACCACCATGGACAAAGCGATCGAAGAAGCTGCATCACGCATACAGGAAATGCTGTCAAAATCCCGCGCTTCCGATTCGGGCATAAAGCTAGAGGTGAACGAGAAGATTCTTGATGCCTGCACGAGTCTCATGCAAGCGATTAGAGTGCTAGTGCAGAAATCTCGTTTGCTGCAATCGGAAATTGTTGCCCTCGGCAAAGGAACCGCTTCGGCAAAGGAATTCTACAAACGAAACCACCAATGGACGGAGGGACTAATTTCGGCAGCCAAGAGTGTAGCCCAAGGAGCCAACTTTCTGGTCACGGCGGCAAATAAAACGGTGGTCGGTGGGGCAAAACATCAGCTAGATTTGGTGGTAGCCGCCCAGGAGATTGCGGCCTGCACGGCACAGCTCGTAGTGGCCAGCCGCGTGAAAGCTCCACGATCCAGCACCAACCTTACAGCGCTGGGCACCGCCTCCAAGAACGTCACGCAAGCGACCGGGATTGTTGTTGCCACGGCGAAGGATTGCAGCCAGCGGTTGGAAGATTCCCAGGATCTGGATCTTGGCACGCTGACGGTACATCAAGCCAAAACGAAAGAGATGGAAATTCAGGTAAAGGTGCTTGAGCTAGAGCAGGCACTGCAAATGGAGCGAATGCGCCTGGCCTCATTCCGCAAGAAGAACTACCAACAACCCGTGGAAGAGTAGTAAACCTAGCACTTGGCGCCACTCCCATGTTGGGTACGCTCCACGCTTTATTTAAGAAGGTAGTACGGGTCGCAGCGATCACTTTTTCGAAATTCACCAAACACATACACAGAGGTTTAAAATGACCAATCTGTAGACGACTGTAGCTATGTTTCAATCCAATCCCAAAAAATCAAACAAAATGCTTGGATTTAATTTGCTCTCTAGATGGAGATGCATTTCTACCGATTGTGTCTTATTTTGGCAATCATTTCAAATCACTTCAGACTGGTAATATGCAACAAACTGGAGGTGAAAACTGCTTGTGCTGAAAAATGTTACACTTATCATCCCACGTTATCAGCCACGCATATCACACGTTAGCCAATGAGAGGGAGGCATCATCATGCAACATCGACATTATGTTAAGAGTGTTTCGTCGCTTCATTAAGCGTTATTAATAGGATAGTGAATATATTAGTATAGCATATTTAACTTTGTTAGATACCCCAAAAGCGTAAGATGCATCCAGTAACGAATGATAAGAACTCTGTTATACTGTATCTTGTATTTCTACTTACACGAAATTTGATGCAACAATAACATGGATCA]

[+] EMBL BX615300             [GATCACGACCCTTTTCCACTCACTGCAGAAAACAAGCGAATCAGGTACGGTAAGTGATCGTATAACTGACCTGAAGACAAAACTGGAAGAGGTAACTACCATGATCGTCGACCTGGGCAAGCAAACCGATGGTACCGAAAATCTGGGCGACATGGTGGAGTCCGAGCTGACCACCATGGACAAAGCGATCGAAGAAGCTGCATCACGCATACAGGAAATGCTGTCAAAATCCCGCGCTTCCGATTCGGGCATAAAGCTAGAGGTGAACGAGAAGATTCTTGATGCCTGCACGAGTCTCATGCAAGCGATTAGAGTGCTAGTGCAGAAATCTCGTTTGCTGCAATCGGAAATTGTTGCCCTCGGCAAAGGAACCGCTTCGGCAAAGGAATTCTACAAACGAAACCACCAATGGACGGAGGGACTAATTTCGGCAGCCAAGAGTGTAGCCCAAGGAGCCAACTTTCTGGTCACGGCGGCAAATAAAACGGTGGTCGGTGGGGCAAAACATCAGCTAGATTTGGTGGTAGCCGCCCAGGAGATTGCGGCCTGCACGGCACAGCTCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX602050             [                                                                                                                                                                                                                                                                                                                                                         GGAAATTGTTGCCCTCGGCAAAGGAACCGCTTCGGCAAAGGAATTCTACAAACGAAACCACCAATGGACGGAGGGACTAATTTCGGCAGCCAAGAGTGTAGCCCAAGGAGCCAACTTTCTGGTCACGGCGGCAAATAAAACGGTGGTCGGTGGGGCAAAACATCAGCTAGATTTGGTGGTAGCCGCCCAGGAGATTGCGGCCTGCACGGCACAGCTCGTAGTGGCCAGCCGCGTGAAAGCTCCACGATCCAGCACCAACCTTACAGCGCTGGGCACCGCCTCCAAGAACGTCACGCAAGCGACCGGGATTGTTGTTGCCACGGCGAAGGATTGCAGCCAGCGGTTGGAAGATTCCCAGGATCTGGATCTTGGCACGCTGACGGTACATCAAGCCAAAACGAAAGAGATGGAAATTCAGGTAAAGGTGCTTGAGCTAGAGCAGGCACTGCAAATGGAGCGAATGCGCCTGGCCTCATTCCGCAAGAAGAACTACCAACAACCCGTGGAAGAGTAGTAAACCTAGCACTTGGCGCCACTCCCATGTTGGGTACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX611520             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TACATCAAGCCAAAACGAAAGAGATGGAAATTCAGGTAAAGGTGCTTGAGCTAGAGCAGGCACTGCAAATGGAGCGAATGCGCCTGGCCTCATTCCGCAAGAAGAACTACCAACAACCCGTGGAAGAGTAGTAAACCTAGCACTTGGCGCCACTCCCATGTTGGGTACGCTCCACGCTTTATTTAAGAAGGTAGTACGGGTCGCAGCGATCACTTTTTCGAAATTCACCAAACACATACACAGAGGTTTAAAATGACCAATCTGTAGACGACTGTAGCTATGTTTCAATCCAATCCCAAAAAATCAAACAAAATGCTTGGATTTAATTTGCTCTCTAGATGGAGATGCATTTCTACCGATTGTGTCTTATTTTGGCAATCATTTCAAATCACTTCAGACTGGTAATATGCAACAAACTGGAGGTGAAAACTGCTTGTGCTGAAAAATGTTACACTTATCATCCCACGTTATCAGCCACGCATATCACACGTTAGCCAATGAGAGGGAGGCATCATCATGCAACATCGACATTATGTTAAGAGTGTTTCGTCGCTTCATTAAGCGTTATTAATAGGATAGTGAATATATTAGTATAGCATATTTAACTTTGTTAGATACCCCAAAAGCGTAAGATGCATCCAGTAACGAATGATAAGAACTCTGTTATACTGTATCTTGTATTTCTACTTACACGAAATTTGATGCAACAATAACATGGATCA]


>consensus_6701#0 GATCACGACCCTTTTCCACTCACTGCAGAAAACAAGCGAATCAGGTACGGTAAGTGATCG TATAACTGACCTGAAGACAAAACTGGAAGAGGTAACTACCATGATCGTCGACCTGGGCAA GCAAACCGATGGTACCGAAAATCTGGGCGACATGGTGGAGTCCGAGCTGACCACCATGGA CAAAGCGATCGAAGAAGCTGCATCACGCATACAGGAAATGCTGTCAAAATCCCGCGCTTC CGATTCGGGCATAAAGCTAGAGGTGAACGAGAAGATTCTTGATGCCTGCACGAGTCTCAT GCAAGCGATTAGAGTGCTAGTGCAGAAATCTCGTTTGCTGCAATCGGAAATTGTTGCCCT CGGCAAAGGAACCGCTTCGGCAAAGGAATTCTACAAACGAAACCACCAATGGACGGAGGG ACTAATTTCGGCAGCCAAGAGTGTAGCCCAAGGAGCCAACTTTCTGGTCACGGCGGCAAA TAAAACGGTGGTCGGTGGGGCAAAACATCAGCTAGATTTGGTGGTAGCCGCCCAGGAGAT TGCGGCCTGCACGGCACAGCTCGTAGTGGCCAGCCGCGTGAAAGCTCCACGATCCAGCAC CAACCTTACAGCGCTGGGCACCGCCTCCAAGAACGTCACGCAAGCGACCGGGATTGTTGT TGCCACGGCGAAGGATTGCAGCCAGCGGTTGGAAGATTCCCAGGATCTGGATCTTGGCAC GCTGACGGTACATCAAGCCAAAACGAAAGAGATGGAAATTCAGGTAAAGGTGCTTGAGCT AGAGCAGGCACTGCAAATGGAGCGAATGCGCCTGGCCTCATTCCGCAAGAAGAACTACCA ACAACCCGTGGAAGAGTAGTAAACCTAGCACTTGGCGCCACTCCCATGTTGGGTACGCTC CACGCTTTATTTAAGAAGGTAGTACGGGTCGCAGCGATCACTTTTTCGAAATTCACCAAA CACATACACAGAGGTTTAAAATGACCAATCTGTAGACGACTGTAGCTATGTTTCAATCCA ATCCCAAAAAATCAAACAAAATGCTTGGATTTAATTTGCTCTCTAGATGGAGATGCATTT CTACCGATTGTGTCTTATTTTGGCAATCATTTCAAATCACTTCAGACTGGTAATATGCAA CAAACTGGAGGTGAAAACTGCTTGTGCTGAAAAATGTTACACTTATCATCCCACGTTATC AGCCACGCATATCACACGTTAGCCAATGAGAGGGAGGCATCATCATGCAACATCGACATT ATGTTAAGAGTGTTTCGTCGCTTCATTAAGCGTTATTAATAGGATAGTGAATATATTAGT ATAGCATATTTAACTTTGTTAGATACCCCAAAAGCGTAAGATGCATCCAGTAACGAATGA TAAGAACTCTGTTATACTGTATCTTGTATTTCTACTTACACGAAATTTGATGCAACAATA ACATGGATCA



consensusID : consensus_6701#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1021
fasta sequence
                              [AAGCATATTCGGCACGAGGCCNACAGGTTAGCAAACGTGTAACACAAACTGCAGGCTGCGCTGATTGGAAGGTGCGAAGCGCTAGAAACGGCGCTCATTGAACTAGCAAAGATTAGTGGAGAGACTGGCACTGACTGCACCCATGCCTGGAGGCGTGCATTAAGTCGTCGGAGAAAGCTGACACTTGCGCGCCATCGGTGAAAATGAAATGCCCGGAGCTGGCAGGAACACCCACCTACTTTTTGATGATAGCGGAAGCAGCTGCAGGAAGTGCTGAGCCAAGCGTGAAGATGGTCCAGTGATGAACTATCTGAAGGACAAGTTCGACGAACGTAGAATCGCTGGCACGGAAAGTCATTATCGGGGCGCATCTGCTCGCTTCTGCTCACGTGCAGGGCATGACTGTATGCAATCGCTCGGCCAAACATTGAAAGCGGTGAACGTATCGCAGAAGAGTTGAAGAAACTGGGTCAATCGATCACGACCCTTTTCCACTCACTGCAGAAAACAAGCGAATCAGGTACGGTAAGTGATCGTATAACTGACCTGAAGACAAAACTGGAAGAGGTAACTACCATGATCGTCGACCTGGGCAAGCGAAACCGATTGGTACCGAAAGATCTGGGCGACATGGTGGAGTCCGAGCTGAACCACCAATGGACAAAGCGATCGAAGAAGCTTGGCATCACGCATTACGGAAATGCTTGTCCAAAATCCCGCGGCCTTTTCCGGAATTATCCGGGGGCATTAAAGGGCTTACGAAGGGTTGAGACACGGAGGAAGATTCCTTGGATTGCCTTGNCACGAAGTNTTCCATTTGCCAAGCANATCAGACGAGTTGNNTTAAGTTGGCCAGGAAATCTTCCGGTTTTGCCTGNCAAGTTCCGGGGCACATTGTTTTGGGCCCTCGGGGCAAAAGGGAAACCGTTTTCGGGCGAAAAGGGGAATTTCTTCACACAGGGGAAACCCCCGATTNGAGCACGGCAGGGANCNNANATCTCGGGGGACCAAGAGATGTTTG]

[+] EMBL BX467576             [AAGCATATTCGGCACGAGGCCNACAGGTTAGCAAACGTGTAACACAAACTGCAGGCTGCGCTGATTGGAAGGTGCGAAGCGCTAGAAACGGCGCTCATTGAACTAGCAAAGATTAGTGGAGAGACTGGCACTGACTGCACCCATGCCTGGAGGCGTGCATTAAGTCGTCGGAGAAAGCTGACACTTGCGCGCCATCGGTGAAAATGAAATGCCCGGAGCTGGCAGGAACACCCACCTACTTTTTGATGATAGCGGAAGCAGCTGCAGGAAGTGCTGAGCCAAGCGTGAAGATGGTCCAGTGATGAACTATCTGAAGGACAAGTTCGACGAACGTAGAATCGCTGGCACGGAAAGTCATTATCGGGGCGCATCTGCTCGCTTCTGCTCACGTGCAGGGCATGACTGTATGCAATCGCTCGGCCAAACATTGAAAGCGGTGAACGTATCGCAGAAGAGTTGAAGAAACTGGGTCAATCGATCACGACCCTTTTCCACTCACTGCAGAAAACAAGCGAATCAGGTACGGTAAGTGATCGTATAACTGACCTGAAGACAAAACTGGAAGAGGTAACTACCATGATCGTCGACCTGGGCAAGCGAAACCGATTGGTACCGAAAGATCTGGGCGACATGGTGGAGTCCGAGCTGAACCACCAATGGACAAAGCGATCGAAGAAGCTTGGCATCACGCATTACGGAAATGCTTGTCCAAAATCCCGCGGCCTTTTCCGGAATTATCCGGGGGCATTAAAGGGCTTACGAAGGGTTGAGACACGGAGGAAGATTCCTTGGATTGCCTTGNCACGAAGTNTTCCATTTGCCAAGCANATCAGACGAGTTGNNTTAAGTTGGCCAGGAAATCTTCCGGTTTTGCCTGNCAAGTTCCGGGGCACATTGTTTTGGGCCCTCGGGGCAAAAGGGAAACCGTTTTCGGGCGAAAAGGGGAATTTCTTCACACAGGGGAAACCCCCGATTNGAGCACGGCAGGGANCNNANATCTCGGGGGACCAAGAGATGTTTG]


>consensus_6701#1 AAGCATATTCGGCACGAGGCCNACAGGTTAGCAAACGTGTAACACAAACTGCAGGCTGCG CTGATTGGAAGGTGCGAAGCGCTAGAAACGGCGCTCATTGAACTAGCAAAGATTAGTGGA GAGACTGGCACTGACTGCACCCATGCCTGGAGGCGTGCATTAAGTCGTCGGAGAAAGCTG ACACTTGCGCGCCATCGGTGAAAATGAAATGCCCGGAGCTGGCAGGAACACCCACCTACT TTTTGATGATAGCGGAAGCAGCTGCAGGAAGTGCTGAGCCAAGCGTGAAGATGGTCCAGT GATGAACTATCTGAAGGACAAGTTCGACGAACGTAGAATCGCTGGCACGGAAAGTCATTA TCGGGGCGCATCTGCTCGCTTCTGCTCACGTGCAGGGCATGACTGTATGCAATCGCTCGG CCAAACATTGAAAGCGGTGAACGTATCGCAGAAGAGTTGAAGAAACTGGGTCAATCGATC ACGACCCTTTTCCACTCACTGCAGAAAACAAGCGAATCAGGTACGGTAAGTGATCGTATA ACTGACCTGAAGACAAAACTGGAAGAGGTAACTACCATGATCGTCGACCTGGGCAAGCGA AACCGATTGGTACCGAAAGATCTGGGCGACATGGTGGAGTCCGAGCTGAACCACCAATGG ACAAAGCGATCGAAGAAGCTTGGCATCACGCATTACGGAAATGCTTGTCCAAAATCCCGC GGCCTTTTCCGGAATTATCCGGGGGCATTAAAGGGCTTACGAAGGGTTGAGACACGGAGG AAGATTCCTTGGATTGCCTTGNCACGAAGTNTTCCATTTGCCAAGCANATCAGACGAGTT GNNTTAAGTTGGCCAGGAAATCTTCCGGTTTTGCCTGNCAAGTTCCGGGGCACATTGTTT TGGGCCCTCGGGGCAAAAGGGAAACCGTTTTCGGGCGAAAAGGGGAATTTCTTCACACAG GGGAAACCCCCGATTNGAGCACGGCAGGGANCNNANATCTCGGGGGACCAAGAGATGTTT G



consensusID : consensus_6701#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 910
fasta sequence
                              [CCGTGATCATTACGCAAAGGAAGAAATGTCTTTGCAGCAGAGCGTAAACGAAAATTCACTTAAAGCGCAGGAACTATCCGATCAAATTGAACAATTGCGGACGGAAAATGATACACTCAAACAACAATACAACGAACTGGAAGCAGCCAAAGCGTTGCAAGCGGAAGAGTTCCAGCGAACACACCAGGAGGAACTGCTTCGGTTCGATTCACTGCAGACGGAAATGAACGATAAGCTGGCCACTATCGCCTCGGAAAAGGATACCATAGCGGGCGAAAAGGAGCAAACCTGGGAGCAGCTGCTAATGCTTCAAACGGAATCCACCCAAAAGCAGGCTGATTTTGAGTCGCTGGAAAAGGATTTGAAATCAGTTCTCGAGCAAAAGGATCACGAATTGGAAGAACTTAATGCAAAGTATCGGGAGCTGGAAGAAAAATATCAGAGTCTAGATGCAAATATGGAACGGTTACTTTCCGAAAAGGAAACAATTGAATCTGATCTGCAAGATTTACTTCACCAACAGGAGCAAACGGAACACAAACTGCAGGCTGCGCTGTTGAAGGTGGAAGCGCTAGAAACGGCGCTCATTGACAGCAAAATTAGTGGAGAGACGGCACTGCGCACCCTGCTGGAGGCGTGCATTAAGTCGTCGGAAAAGCTGACACTGCGCGCCATCGGTGAAAATGAAATGCCCGGAGCTGGCGGAACACCCACCTACTTTTTGATGATAGCGGAAGAGCTGCAGGAAGTGCTGACCAAGCTGAAGATGGTCCATGAGAACTATCTGAAGGACAATTCGACGAACGTAGAATCGCTGGCACGGAAAGTCATTATCGGGGCGCATCTGCTCGCTTCTGCTCACGTGCAGGGCATGACTGTATGCAATCGCTCGGCAAACATTGAAAGCGGT]

[+] EMBL BM644785             [CCGTGATCATTACGCAAAGGAAGAAATGTCTTTGCAGCAGAGCGTAAACGAAAATTCACTTAAAGCGCAGGAACTATCCGATCAAATTGAACAATTGCGGACGGAAAATGATACACTCAAACAACAATACAACGAACTGGAAGCAGCCAAAGCGTTGCAAGCGGAAGAGTTCCAGCGAACACACCAGGAGGAACTGCTTCGGTTCGATTCACTGCAGACGGAAATGAACGATAAGCTGGCCACTATCGCCTCGGAAAAGGATACCATAGCGGGCGAAAAGGAGCAAACCTGGGAGCAGCTGCTAATGCTTCAAACGGAATCCACCCAAAAGCAGGCTGATTTTGAGTCGCTGGAAAAGGATTTGAAATCAGTTCTCGAGCAAAAGGATCACGAATTGGAAGAACTTAATGCAAAGTATCGGGAGCTGGAAGAAAAATATCAGAGTCTAGATGCAAATATGGAACGGTTACTTTCCGAAAAGGAAACAATTGAATCTGATCTGCAAGATTTACTTCACCAACAGGAGCAAACGGAACACAAACTGCAGGCTGCGCTGTTGAAGGTGGAAGCGCTAGAAACGGCGCTCATTGACAGCAAAATTAGTGGAGAGACGGCACTGCGCACCCTGCTGGAGGCGTGCATTAA                                                                                                                                                                                                                                                                         ]
[+] EMBL BM577211             [                                                                                                                                                                                                                        ccgGGAAATGAACGATAAGCTGGCCACTATCGCCTCGGAAAAGGATACCATAGCGGGCGAAAAGGAGCAAACCTGGGAGCAGCTGCTAATGCTTCAAACGGAATCCACCCAAAAGCAGGCTGATTTTGAGTCGCTGGAAAAGGATTTGAAATCAGTTCTCGAGCAAAAGGATCACGAATTGGAAGAACTTAATGCAAAGTATCGGGAGCTGGAAGAAAAGTATCAGAGTCTAGATGCAAATATGGAACGGTTACTTTCCGAAAAGGAAACAATTGAATCTGATCTGCAAGATTTACTTCACCAACAGGAGCAAACGGAACACAAACTGCAGGCTGCGCTGTTGAAGGTGGAAGCGCTAGAAACGGCGCTCATTGACAGCAAAATTAGTGGAGAGACGGCACTGCGCACCCTGCTGGAGGCGTGCATTAAGTCGTCGGAAAAGCTGACACTGCGCGCCATCGGTGAAAATGAAATGCCCGGAGCTGGCGGAACACCCACCTACTTTTTGATGATAGCGGAAGAGCTGCAGGAAGTGCTGACCAAGCTGAAGATGGTCCATGAGAACTATCTGAAGGACAATTCGACGAACGTAGAATCGCTGGCACGGAAAGTCATTATCGGGGCGCATCTGCTCGCTTCTGCTCACGTGCAGGGCATGACTGTATGCAATCGCTCGGCAAACATTGAAAGCGGT]


>consensus_6701#2 CCGTGATCATTACGCAAAGGAAGAAATGTCTTTGCAGCAGAGCGTAAACGAAAATTCACT TAAAGCGCAGGAACTATCCGATCAAATTGAACAATTGCGGACGGAAAATGATACACTCAA ACAACAATACAACGAACTGGAAGCAGCCAAAGCGTTGCAAGCGGAAGAGTTCCAGCGAAC ACACCAGGAGGAACTGCTTCGGTTCGATTCACTGCAGACGGAAATGAACGATAAGCTGGC CACTATCGCCTCGGAAAAGGATACCATAGCGGGCGAAAAGGAGCAAACCTGGGAGCAGCT GCTAATGCTTCAAACGGAATCCACCCAAAAGCAGGCTGATTTTGAGTCGCTGGAAAAGGA TTTGAAATCAGTTCTCGAGCAAAAGGATCACGAATTGGAAGAACTTAATGCAAAGTATCG GGAGCTGGAAGAAAAATATCAGAGTCTAGATGCAAATATGGAACGGTTACTTTCCGAAAA GGAAACAATTGAATCTGATCTGCAAGATTTACTTCACCAACAGGAGCAAACGGAACACAA ACTGCAGGCTGCGCTGTTGAAGGTGGAAGCGCTAGAAACGGCGCTCATTGACAGCAAAAT TAGTGGAGAGACGGCACTGCGCACCCTGCTGGAGGCGTGCATTAAGTCGTCGGAAAAGCT GACACTGCGCGCCATCGGTGAAAATGAAATGCCCGGAGCTGGCGGAACACCCACCTACTT TTTGATGATAGCGGAAGAGCTGCAGGAAGTGCTGACCAAGCTGAAGATGGTCCATGAGAA CTATCTGAAGGACAATTCGACGAACGTAGAATCGCTGGCACGGAAAGTCATTATCGGGGC GCATCTGCTCGCTTCTGCTCACGTGCAGGGCATGACTGTATGCAATCGCTCGGCAAACAT TGAAAGCGGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6701#1      ------------------------------------------------------------
consensus_6701#2      ------------------------------------------------------------
consensus_6701#0      GATCACGACCCTTTTCCACTCACTGCAGAAAACAAGCGAATCAGGTACGGTAAGTGATCG 60
                                                                                  

consensus_6701#1      ------------------------------------------------------------
consensus_6701#2      ------------------------------------------------------------
consensus_6701#0      TATAACTGACCTGAAGACAAAACTGGAAGAGGTAACTACCATGATCGTCGACCTGGGCAA 120
                                                                                  

consensus_6701#1      ---------------------------AAGCATATTCGGCACGAGGCCNACAG--GTTAG 31
consensus_6701#2      ------------------------------------------------------------
consensus_6701#0      GCAAACCGATGGTACCGAAAATCTGGGCGACATGGTGGAGTCCGAGCTGACCACCATGGA 180
                                                                                  

consensus_6701#1      CAAACGTGTAACACAAACTGCAGGCTGCGCTGATTGGAAGGTGCGAAGCGCTAGAAACGG 91
consensus_6701#2      ------------------------CCGTGATCATTA-----CGCAAAGGA--AGAAATG- 28
consensus_6701#0      CAAAGCGATCGAAGAAGCTGCATCACGCATACAGGAAATGCTGTCAAAATCCCGCGCTTC 240
                                                *     *         *  **      *      

consensus_6701#1      CGCTCATTGAACTAG--CAAAGATTAGTGGAGAGACTGGCACTGACTGCACCCA-TGCCT 148
consensus_6701#2      ---TCTTTG---CAG--CAGAGCGTAAACGAAA-ATTCACTTAAAGCGCAGGAACTATCC 79
consensus_6701#0      CGATTCGGGCATAAAGCTAGAGGTGAACGAGAAGATTCTTGATGCCTGCACGAGTCTCAT 300
                         *    *    *    * **   *      * * *          ***          

consensus_6701#1      GGAGGCGTGCATTAAGTCGTCGGAGAAAGCTGA-------CACTTGCGCGCCATCGGTGA 201
consensus_6701#2      GATCAAATTGAACAA-TTGCGGACGGAAAATGA-------TACACTCAAACAA-CAAT-A 129
consensus_6701#0      GCAAGCGATTAGAGTGCTAGTGCAGAAATCTCGTTTGCTGCAATCGGAAATTGTTGCCCT 360
                      *         *          *  * **  *          *                  

consensus_6701#1      AAATGAAATGCCCGGAGCTGGCAGGAACACCCACCTACTTTTTGAT-GATAG-CGGAAG- 258
consensus_6701#2      CAACGAA----CTGGAAGCAGCCAAAGCGTT-GCAAGCGGAAGAGT-TCCAG-CGAACA- 181
consensus_6701#0      CGGCAAAGGAACCGCTTCGGCAAAGGAATTCTACAAACGAAACCACCAATGGACGGAGGG 420
                           **    * *                   *   *             * ** *   

consensus_6701#1      --------CAGCTGCAGGAAGTGCTGAGCCAAGCGTGAA---GATGGTC-CAGTGATGAA 306
consensus_6701#2      --------CACCAGGAGGAACTGCTTCGGTTCGATTCAC---TGCAGAC--GGAAATGAA 228
consensus_6701#0      ACTAATTTCGGCAGCCAAGAGTGTAGCCCAAGGAGCCAACTTTCTGGTCACGGCGGCAAA 480
                              *  * *     * **         *    *        * *   *     **

consensus_6701#1      CTATCTGAAGGACAAGTTCGACGAACGTAGAATCGCTGGCACGGAAAGTCATTATCGGGG 366
consensus_6701#2      CGATAAGCTGGCCACTATCGCCT--CGGAAAAG-GATACCATAGCGGGCGAAAA--GGAG 283
consensus_6701#0      TAAAACGGTGGTCGGTGGGGCAAAACATCAGCTAGATTTGGTGGTAGCCGCCCAGGAGAT 540
                        *   *  ** *      *     *        * *      *         *   *  

consensus_6701#1      CGCA-TCTGCTCGCTTCTGCTCACGT--GCAGGGCATGACTGTATGCAATCGCTCGGC-- 421
consensus_6701#2      CAAA-CCTGGGAGCAGCTGCTAATGC--TTCAAACG-GAATCCACCCAAAAGCA-GGC-- 336
consensus_6701#0      TGCGGCCTGCACGGCACAGCTCGTAGTGGCCAGCCGCGTGAAAGCTCCACGATCCAGCAC 600
                            ***   *   * ***             *  *        * *       **  

consensus_6701#1      CAAACATTGAAAGCGGTGAACGTATCGCAGAAGAGTTG---AAGAAACTGGGTCAATCGA 478
consensus_6701#2      TGATTTTGAGTCGCTGGAAAAGGATTTGAAATCAGTTC---------TCGAGCAAAAGGA 387
consensus_6701#0      CAACCTTACAGCGCTGGGCACCGCCTCCAAGAACGTCACGCAAGCGACCGGGATTGTTGT 660
                        *   *     ** *   *        *     **             * *      * 

consensus_6701#1      T--CACGAC------CCTTTTCCACTCACTGCAGAAAACAAGCGAATCAGGTAC-GGTAA 529
consensus_6701#2      T--CACGAA------TTGGAAGAACTTAATGCAAAGTATCGG-GAGCTGGAAGA-AAAAT 437
consensus_6701#0      TGCCACGGCGAAGGATTGCAGCCAGCGGTTGGAAGATTCCCAGGATCTGGATCTTGGCAC 720
                      *  ****                *     ** *          **    *        * 

consensus_6701#1      G-TGATCGTATAACTGACCTGAAGACAAAACTGGAAGAGGTAACTACCATGATCGTCGAC 588
consensus_6701#2      A-TCAGAGTCTAGATG---CAAATATGGAACGGTTACTTTCCGAAAAGGAAACAATTGAA 493
consensus_6701#0      GCTGACGGTACATCAAG--CCAAAACGAAAGAGATGGAAATTCAGGTAAAGGTGCTTGAG 778
                        * *  **  *         ** *   **  *                      * ** 

consensus_6701#1      CTGG-GCAAGCGAAACCGATTGGTACCGAAAGATCTGGGCGACATGGTGGAGTCCGAGCT 647
consensus_6701#2      TCTG-ATCTGCAAGATTTACTT-CACCAACAGGAGCAAACGGAACA-CAAACTGCAGGCT 550
consensus_6701#0      CTAGAGCAGGCACTGCAAATGG--AGCGAATGCGCCTGGCCTCATTCCGCAAGAAGAACT 836
                         *     **       *     * * *  *       *   *      *       **

consensus_6701#1      G--AACCACCAATGGACAAAGCGATCGAAGAAGC--TTGGCATCAC--GCATTACGGAAA 701
consensus_6701#2      G--CGCTGTTGAAGGTGGAAGCGCTAGAAACGGC--GCT-CATTGA--CAGCAAAATTAG 603
consensus_6701#0      ACCAACAACCCGTGGA-AGAGTAGTAAACCTAGCACTTGGCGCCACTCCCATGTTGGGTA 895
                           *       **    **   *  *    **      *                   

consensus_6701#1      TGCTT-GTCCAAAATCCCGCGGCCTTTTCCGGAATTATCCGGGGGCATTA-AAGGGCTTA 759
consensus_6701#2      TGGAG-AGACGGCACTGCGCACCCTGCTGGAGGCGTGCATTAAGTCGTCGGAAAAGCTGA 662
consensus_6701#0      CGCTCCACGCTTTATTTAAGAAGGTAGTACGGGTCGCAGCGATCACTTTTTCGAAATTCA 955
                       *       *   *          *  *   *             * *         * *

consensus_6701#1      CGAAGGGTTGAGACACGGAGGAAGATTCCTTGGATTGCC--TTGNCACGA-AGTNTTCCA 816
consensus_6701#2      CACTGCGC---GCCATCGGTGAAAATGAAATGCCCGGAG--CTGGCGGAACACCCACCTA 717
consensus_6701#0      CCAAACACATACACAGAGGTTTAAAATGACCAATCTGTAGACGACTGTAGCTATGTTTCA 1015
                      *            **  *    * *           *                      *

consensus_6701#1      TTT---GCCAAGCANATCAGACGAGTTGNNTTAAGTTGGCCAGGAAATCTTCCGGTTTTG 873
consensus_6701#2      CTT---TTTGATGATAGCGGAAGAGCTGCAGGAAGT--GCTGACCAAGCTGAAGATGGTC 772
consensus_6701#0      ATCCAATCCCAAAAAATCAAACAAAATGCTTGGATTTAATTTGCTCTCTAGATGGAGATG 1075
                       *        *  * * *  *  *  **     * *                 *    * 

consensus_6701#1      CCTGNCAAGT-TCCGGGGCACATTGTTTTGG--GCCC----TCGGGGCAAAAGGGAAACC 926
consensus_6701#2      CATGAGAACTATCTGAAGGACAATTCGACGA--ACGTAGAATCGCTG-GCACGGAAAGTC 829
consensus_6701#0      CATTTCTACCGATTGTGTCTTATTTTGGCAATCATTTCAAATCACTTCAGACTGGTAATA 1135
                      * *    *      *      * *                 **       *  *  *   

consensus_6701#1      GTTTTCGGGCGAAAAGGGGAATTTCTTCACACAGGGGAAACCCCCGATTNGAG---CACG 983
consensus_6701#2      ATTATCGGG-------GCGCATCTGCTCGCTTCTG-----CTCACGTGCAGGG---CATG 874
consensus_6701#0      TGCAACAAACTGGAGGTGAAAACTGCTTGTGCTGAAAAATGTTACACTTATCATCCCACG 1195
                           *              *  *  *                 *           ** *

consensus_6701#1      GCAGGGANCNNANAT----CTCGGGGGACCAAGAGATGTTTG------------------ 1021
consensus_6701#2      ACTGTATGCAATCG-----CTCGGCAAACATTGAAAGCGGT------------------- 910
consensus_6701#0      TTATCAGCCACGCATATCACACGTTAGCCAATGAGAGGGAGGCATCATCATGCAACATCG 1255
                              *          * **     *   ** *                        

consensus_6701#1      ------------------------------------------------------------
consensus_6701#2      ------------------------------------------------------------
consensus_6701#0      ACATTATGTTAAGAGTGTTTCGTCGCTTCATTAAGCGTTATTAATAGGATAGTGAATATA 1315
                                                                                  

consensus_6701#1      ------------------------------------------------------------
consensus_6701#2      ------------------------------------------------------------
consensus_6701#0      TTAGTATAGCATATTTAACTTTGTTAGATACCCCAAAAGCGTAAGATGCATCCAGTAACG 1375
                                                                                  

consensus_6701#1      ------------------------------------------------------------
consensus_6701#2      ------------------------------------------------------------
consensus_6701#0      AATGATAAGAACTCTGTTATACTGTATCTTGTATTTCTACTTACACGAAATTTGATGCAA 1435
                                                                                  

consensus_6701#1      ---------------
consensus_6701#2      ---------------
consensus_6701#0      CAATAACATGGATCA 1450
                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)