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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6749#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1273 fasta sequence
[AATTTTTAATCACACTGATCGGATTTAAACAAAAATCATTCGTGACATACATGTTAGGATAGCAGAAGAGGGGGAAAACTACAAAAGCAGCTAAAGTTATAAGTAATGCAAACAAAACGAACGTATGTATATATGTACAAAATGATTCCGCAACGCAAAATAGTGAAGAAAAGATTCTACAAAAACCATAACACACCATTTAGAGTAAAGGAGGCGACAGGTCAGTACCAGTATAAAACGTCAACCCTTTTCGTCCGGAA-CCCGCGTGGTCAGGGGGCTGATATTCCAAAACATAAAAACGCTCCCCCTCGCTTCACTGACTACTGTTAAGGGCGGTAATCTAAAATCATTCTCATGGTGAGCGCACGATAGAGCTAAAGGCCATCTACTTGTAGAATAAAATCGGTTCCTTGCTCATGCCTCTCATTTACCTAAAACGAAGTGGGGTACTAAAAAACCATACTTTATCCGGGTAGCAGTACAATTGTACAGTGTGTGGGTGTGTGTGTGTGTGTTTGTGTGTGCAAGATTAAACCGTAATAAAGAGCAACCGTAACACAACGATAGGCTCATCCAGAAGCTTGTCCATCTATCCATTCATTCCCCCTTCCCTGACATCCCTTTGCGTACAATCTTTTGGTAAAAAAGGTAATAAATAAATATCAATCACTGTAATCCCTTCAAACACACGCACACACGCAATCGCCTCACTGAAACCGGGGGGGCTCCACCGGGCATCCGCCGCTCGTATATTATAACACCGGACCACTGTCGCCCGACCCGTACAGTATGCTGTCAAAGCCAAACGTTGGCCGTCGCCGTTGCGAAAGCGAGTAGTTTTTCCGTTCCAGCTGCCGCAAGCGCTTCGGGCGCGGCTCGTCGAAGCAAAGCTCGGGCCGGCGTTTGCGTATCTGGCCGAAGAGCTGCCGCTCCTGCTTGGCCACGAACGGTTTGCCCTCGGTTGCCGTGAATTGGGACCGCACGCAGCAATTCGCTCTCGCTGAAACCGATAAACTGCATGCACTCCTCGTGCTCGAATCCGACGAAAACGTCCGACGAAGGGCCGGTGCCAAGGAACAGCACGTCATCGTCGTCCGACGCGACCGAGAGCGAGCGCATGCCCGCCGTCAGCAATTGGTGGCTGCTAGCGAGGTGAAGGTTGGCAAATATCTCTTGCTTTACCAGCACCGGCGTGATCAGGTCGCTGAAGCACCACGGTTCTTTGGGTACATTGTGCCAGCTGGGGGGCGTCGATATGGTGGTTGTTGCAGCG]
[+] EMBL CNS09J9D [AATTTTTAATCACACTGATCGGATTTAAACAAAAATCATTCGTGACATACATGTTAGGATAGCAGAAGAGGGGGAAAACTACAAAAGCAGCTAAAGTTATAAGTAATGCAAACAAAACGAACGTATGTATATATGTACAAAATGATTCCGCAACGCAAAATAGTGAAGAAAAGATTCTACAAAAACCATAACACACCATTTAGAGTAAAGGAGGCGACAGGTCAGTACCAGTATAAAACGTCAACCCTTTTCGTCCGGAA CCCGCGTGGTCAGGGGGCTGATATTCCAAAACATAAAAACGCTCCCCCTCGCTTCACTGACTACTGTTAAGGGCGGTAATCTAAAATCATTCTCATGGTGAGCGCACGATAGAGCTAAAGGCCATCTACTTGTAGAATAAAATCGGTTCCTTGCTCATGCCTCTCATTTACCTAAAACGAAGTGGGGTACTAAAAAACCATACTTTATCCGGGTAGCAGTACAATTGTACAGTGTGTGGGTGTGTGTGTGTGTTTTTGTGTGTGCAAGATTAAACCGTAATAAAGAGCAACCGTAACACAACGATAGGCTCATCCAGAAGCTTGTCCATCTATCCATTCATTCCCCCTTCCCTGACATCCCTTTGCGTACAATCTTTTGGTAAAAAAGGTAATAAATAAATATCAATCACTGTAATCCCTTCAAACACACGCACACACGCAATCGCCTCACTGAAACCGGGGGGGCTCCACCGGGCATCCGCCGCTCGTATATTATAACACCGGACCACTGTCGCCCGACCCGTACAGTATGCTGTCAAAGCAAAACGTTGGCCGTCGCCGTTGCGAAA CGAGTAGT ]
[+] EMBL CNS09D03 [ TAAACAAAAATCATTCGTGACATACATGTTAGGATAGCAGAAGAGGGGGAAAACTACAAAAG AGCTAAAGTTATAAGTAATGCAAACAAAACGAACGTATGTATATATGTACAAAATGATTCCGCAACGCAAAATAGTGAAGAAAAGATTCTACAAAAACCATAACACACCATTTAGAGTAAAGGAGGCGACAGGTCAGTACCAGTATAAAACGTCAACCCTTTTCGTCCGGAACCCCGCGTGGTCAGGGGGCTGATATTCCAAAACATAAAAACGCTCCCCCTCGCTTCACTGACTACTGTTAAGGGCGGTAATCTAAAATCATTCTCATGGTGAGCGCACGATAGAGCTAAAGGCCATCTACTTGTAGAATAAAATCGGTTCCTTGCTCATGCCTCTCATTTACCTAAAACGAAGTGGGGTACTAAAAAACCATACTTTATCCGGGTAGCAGTACAATTGTACAGTGTGTGGGTGTGTGTGTGTGTGTTTGTGTGTGCAAGATTAAACCGTAATAAAGAGCAACCGTAACACAACGATAGGCTCATCCAGAAGCTTGTCCATCTATCCATTCATTCCCCCTTCCCTGACATCCCTTTGCGTACAATCTTTTGGTAAAAAAGGTAATAAATAAATATCAATCACTGTAATCCCTTCAAACACACGCACACACGCAATCGCCTCACTGAAACCGGGGGGGCTC ]
[-] EMBL CNS09J9C [ GCAGTACAATTGTACAGTGTGTGGGTGTGTGTGTGTGTGTTTGTGTGTGCAAGATTAAACCGTAATAAAGAGCAACCGTAACACAACGATAGGCTCATCCAGAAGCTTGTCCATCTATCCATTCATTCCCCCTTCCCTGACATCCCTTTGCGTACAATCTTTTGGTAAAAAAGGTAATAAATAAATATCAATCACTGTAATCCCTTCAAACACACGCACACACGCAATCGCCTCACTGAAACCGGGGGGGCTCCACCGGGCATCCGCCGCTCGTATATTATAACACCGGACCACTGTCGCCCGACCCGTACAGTATGCTGTCAAAGCCAAACGTTGGCCGTCGCCGTTGCGAAAGCGAGTAGTTTTTCCGTTCCAGCTGCCGCAAGCGCTTCGGGCGCGGCTCGTCGAAGCAAAGCTCGGGCCGGCGTTTGCGTATCTGGCCGAAGAGCTGCCGCTCCTGCTTGGCCACGAACGGTTTGCCCTCGGTTGCCGTGAATTGGGACCGCACGCAGCAATTCGCTCTCGCTGAAACCGATAAACTGCATGCACTCCTCGTGCTCGAATCCGACGAAAACGTCCGACGAAGGGCCGGTGCCAAGGAACAGCACGTCATCGTCGTCCGACGCGACCGAGAGCGAGCGCATGCCCGCCGTCAGCAATTGGTGGCTGCTAGCGAGGTGAAGGTTGGCAAATATCTCTTGCTTTACCAGCACCGGCGTGATCAGGTCGCTGAAGCACCACGGTTCTTTGGGTACATTGTGCCAGCTGGGGGGCGTCGATATGGTGGTTGTTGCAGCG]
[-] EMBL CNS09D02 [ GCAAGATTAAACCGTAATAAAGAGCAACCGTAACACAACGATAGGCTCATCCAGAAGCTTGTCCATCTATCCATTCATTCCCCCTTCCCTGACATCCCTTTGCGTACAATCTTTTGGTAAAAAAGGTAATAAATAAATATCAATCACTGTAATCCCTTCAAACACACGCACACACGCAATCGCCTCACTGAAACCGGGGGGGCTCCACCGGGCATCCGCCGCTCGTATATTATAACACCGGACCACTGTCGCCCGACCCGTACAGTATGCTGTCAAAGCCAAACGTTGGCCGTCGCCGTTGCGAAAGCGAGTAGTTTTTCCGTTCCAGCTGCCGCAAGCGCTTCGGGCGCGGCTCGTCGAAGCAAAGCTCGGGCCGGCGTTTGCGTATCTGGCCGAAGAGCTGCCGCTCCTGC ]
[-] EMBL CNS09KJD [ CGGGCATCCGCCGCTCGTATATTATAACACCGGACCACTGTCGCCCGACCCGTACAGTATGCTGTCAAAGCCAAACGTTGGCCGTCGCCGTTGCGAAAGCGAGTAGTTTTTCCGTTCCAGCTGCCGCAAGCGCTTCGGGCGCGGCTCGTCGAAGCAAAGCTCGGGCCGGCGTTTGCGTATCTGGCCGAAGAGCTG ]
consensusID : consensus_6749#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence
[CAGTAGCGCAATACAACTGTACAGTGTGTGGATGTGTGTGTGTGTGTTTGTATGTGCAAAATTAAACCGTAATAAAGAGCGACCGTAACACAACGATAGGCTCATCCAGAAGCTTGCCCATCGATCCATCCATTCATCCATCTCCCTTCCCGCACATCCCTTTGTGTACAATCTTTTGGTAAAAAAGGTAATAAATAAATATCAATCACTGCAATCCCTTCACATACACGCGATCGCCTCACTAAAACCGGAGGGGCTCCACCGGGCATCCGCCGCACGTATATTATAACACCGGACCACTGTCGCCCGACCCGTACAGTATGCTCGCAAAGCCAAACGTTGGCCGTCGCCGTTGCGAAAGCGAATAGTCTTTCCGTTCCAGCTGCCGCAAGCGCTTCGGGCGCGGCTCGTCGACGCAGAGCTCGGGCCGGCGTTTGCGTATCTGGCCGAAGAGCTGCCGCTGCTGCCTGGTCACAAACGGTTTGCCCTCGCTTGCCGTGAATTGGGACCGCACGCCGCAATCGCTCTCGCTGAAACCGATAAACTGGACGCACTCCTCGTGCTCGAACCCGACGAAAACGTCCGACGGGTCGGTGCCAAGGAACAGCACGTCATCGTCGTCCGACGCGACCGAGAGCGAGCGCATCCCCGCCGTCAGCAATTGGTGGCTGCTAGCGAGCGG]
[-] EMBL BM607187 [CAGTAGCGCAATACAACTGTACAGTGTGTGGATGTGTGTGTGTGTGTTTGTATGTGCAAAATTAAACCGTAATAAAGAGCGACCGTAACACAACGATAGGCTCATCCAGAAGCTTGCCCATCGATCCATCCATTCATCCATCTCCCTTCCCGCACATCCCTTTGTGTACAATCTTTTGGTAAAAAAGGTAATAAATAAATATCAATCACTGCAATCCCTTCACATACACGCGATCGCCTCACTAAAACCGGAGGGGCTCCACCGGGCATCCGCCGCACGTATATTATAACACCGGACCACTGTCGCCCGACCCGTACAGTATGCTCGCAAAGCCAAACGTTGGCCGTCGCCGTTGCGAAAGCGAATAGTCTTTCCGTTCCAGCTGCCGCAAGCGCTTCGGGCGCGGCTCGTCGACGCAGAGCTCGGGCCGGCGTTTGCGTATCTGGCCGAAGAGCTGCCGCTGCTGCCTGGTCACAAACGGTTTGCCCTCGCTTGCCGTGAATTGGGACCGCACGCCGCAATCGCTCTCGCTGAAACCGATAAACTGGACGCACTCCTCGTGCTCGAACCCGACGAAAACGTCCGACGGGTCGGTGCCAAGGAACAGCACGTCATCGTCGTCCGACGCGACCGAGAGCGAGCGCATCCCCGCCGTCAGCAATTGGTGGCTGCTAGCGAGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6749#0 AATTTTTAATCACACTGATCGGATTTAAACAAAAATCATTCGTGACATACATGTTAGGAT 60
consensus_6749#1 ------------------------------------------------------------
consensus_6749#0 AGCAGAAGAGGGGGAAAACTACAAAAGCAGCTAAAGTTATAAGTAATGCAAACAAAACGA 120
consensus_6749#1 ------------------------------------------------------------
consensus_6749#0 ACGTATGTATATATGTACAAAATGATTCCGCAACGCAAAATAGTGAAGAAAAGATTCTAC 180
consensus_6749#1 ------------------------------------------------------------
consensus_6749#0 AAAAACCATAACACACCATTTAGAGTAAAGGAGGCGACAGGTCAGTACCAGTATAAAACG 240
consensus_6749#1 ------------------------------------------------------------
consensus_6749#0 TCAACCCTTTTCGTCCGGAACCCGCGTGGTCAGGGGGCTGATATTCCAAAACATAAAAAC 300
consensus_6749#1 ------------------------------------------------------------
consensus_6749#0 GCTCCCCCTCGCTTCACTGACTACTGTTAAGGGCGGTAATCTAAAATCATTCTCATGGTG 360
consensus_6749#1 ------------------------------------------------------------
consensus_6749#0 AGCGCACGATAGAGCTAAAGGCCATCTACTTGTAGAATAAAATCGGTTCCTTGCTCATGC 420
consensus_6749#1 ------------------------------------------------------------
consensus_6749#0 CTCTCATTTACCTAAAACGAAGTGGGGTACTAAAAAACCATACTTTATCCGGGTAGCAGT 480
consensus_6749#1 ------------------------------------------------CAGTAGCGCAAT 12
* * *** *
consensus_6749#0 ACAATTGTACAGTGTGTGGGTGTGTGTGTGTGTGTTTGTGTGTGCAAGATTAAACCGTAA 540
consensus_6749#1 ACAACTGTACAGTGTGTGGATGTGTGTGTGTGTGTTTGTATGTGCAAAATTAAACCGTAA 72
**** ************** ******************* ******* ************
consensus_6749#0 TAAAGAGCAACCGTAACACAACGATAGGCTCATCCAGAAGCTTGTCCATCTATCCATTCA 600
consensus_6749#1 TAAAGAGCGACCGTAACACAACGATAGGCTCATCCAGAAGCTTGCCCATCGATCCATCCA 132
******** *********************************** ***** ****** **
consensus_6749#0 TTC-------CCCCTTCCCTGACATCCCTTTGCGTACAATCTTTTGGTAAAAAAGGTAAT 653
consensus_6749#1 TTCATCCATCTCCCTTCCCGCACATCCCTTTGTGTACAATCTTTTGGTAAAAAAGGTAAT 192
*** ******** *********** ***************************
consensus_6749#0 AAATAAATATCAATCACTGTAATCCCTTCAAACACACGCACACACGCAATCGCCTCACTG 713
consensus_6749#1 AAATAAATATCAATCACTGCAATCCCTTCA--------CATACACGCGATCGCCTCACTA 244
******************* ********** ** ****** ***********
consensus_6749#0 AAACCGGGGGGGCTCCACCGGGCATCCGCCGCTCGTATATTATAACACCGGACCACTGTC 773
consensus_6749#1 AAACCGGAGGGGCTCCACCGGGCATCCGCCGCACGTATATTATAACACCGGACCACTGTC 304
******* ************************ ***************************
consensus_6749#0 GCCCGACCCGTACAGTATGCTGTCAAAGCCAAACGTTGGCCGTCGCCGTTGCGAAAGCGA 833
consensus_6749#1 GCCCGACCCGTACAGTATGCTCGCAAAGCCAAACGTTGGCCGTCGCCGTTGCGAAAGCGA 364
********************* *************************************
consensus_6749#0 GTAGTTTTTCCGTTCCAGCTGCCGCAAGCGCTTCGGGCGCGGCTCGTCGAAGCAAAGCTC 893
consensus_6749#1 ATAGTCTTTCCGTTCCAGCTGCCGCAAGCGCTTCGGGCGCGGCTCGTCGACGCAGAGCTC 424
**** ******************************************** *** *****
consensus_6749#0 GGGCCGGCGTTTGCGTATCTGGCCGAAGAGCTGCCGCTCCTGCTTGGCCACGAACGGTTT 953
consensus_6749#1 GGGCCGGCGTTTGCGTATCTGGCCGAAGAGCTGCCGCTGCTGCCTGGTCACAAACGGTTT 484
************************************** **** *** *** ********
consensus_6749#0 GCCCTCGGTTGCCGTGAATTGGGACCGCACGCAGCAATTCGCTCTCGCTGAAACCGATAA 1013
consensus_6749#1 GCCCTCGCTTGCCGTGAATTGGGACCGCACGCCGCAAT-CGCTCTCGCTGAAACCGATAA 543
******* ************************ ***** *********************
consensus_6749#0 ACTGCATGCACTCCTCGTGCTCGAATCCGACGAAAACGTCCGACGAAGGGCCGGTGCCAA 1073
consensus_6749#1 ACTGGACGCACTCCTCGTGCTCGAACCCGACGAAAACGTCCGACG---GGTCGGTGCCAA 600
**** * ****************** ******************* ** *********
consensus_6749#0 GGAACAGCACGTCATCGTCGTCCGACGCGACCGAGAGCGAGCGCATGCCCGCCGTCAGCA 1133
consensus_6749#1 GGAACAGCACGTCATCGTCGTCCGACGCGACCGAGAGCGAGCGCATCCCCGCCGTCAGCA 660
********************************************** *************
consensus_6749#0 ATTGGTGGCTGCTAGCGAGGTGAAGGTTGGCAAATATCTCTTGCTTTACCAGCACCGGCG 1193
consensus_6749#1 ATTGGTGGCTGCTAGCGAGCGG-------------------------------------- 682
******************* *
consensus_6749#0 TGATCAGGTCGCTGAAGCACCACGGTTCTTTGGGTACATTGTGCCAGCTGGGGGGCGTCG 1253
consensus_6749#1 ------------------------------------------------------------
consensus_6749#0 ATATGGTGGTTGTTGCAGCG 1273
consensus_6749#1 --------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||