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Anopheles gambiae
cluster # 6797 cluster # 6797       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6797#0 length = 1113 sequences # 2  
consensus_6797#1 length = 986 sequences # 1  
consensus_6797#2 length = 959 sequences # 1  
consensus_6797#3 length = 649 sequences # 1  
consensus_6797#4 length = 90 sequences # 1  

consensusID : consensus_6797#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1113
fasta sequence
                              [ATTTCATTGCCTTGCTTGCTTTGCTTCTTTATTGCATATTATTACAAACTCGTCAGGATCTAAGCTTTCTCGTCCGAGGCCTGGGTGGCACCCGACGCAACCGACTGGCCATCGTCGACTGGTGCATCCTGGCACGATAGCGACGGGAACTTCTGGTACAGGGCAGCGCGATACTTCGGATGGCTGATGCCGTACACGATCGGGTTGTAGACGGCGTTGGCCTTGGCGAACAGCGAGCCCCAAATGGTGGCCAGCGGGCTGATCGGGGCAGCCTTGAAGATTCCGGTGAAGTTGATGACCAGATACGGCGTCCAGGCCATGAACCAGAGCGAGATGGTGACCAGGGCGACCTTGGCCAGCTTCATCTCGGTGCTGGTGTTCTGGGCTTCCTGCGTACGCGAGCGAGGCGACGTTCATCTTCTTGGCCTGCTCGCGCATGTTCTTCTCGTGAGCGGACACAGCCTTCAGGATGAAGGTGTACGAGTAGATGATGGTCAGCAGCGGCAGCCAGTACACGAAGATGGCGTAGATGATGATGTACGAGCGGCTCAGCCACGTCTGGGTCAGGTAGTCGGTTCCGCA-GCGGTCATGTTGCCCTCCGGCACGTATCGGTTCCATCCGAACAGCGGGGCCAGAATCCAGAACAGCGCGAACACCCACACGCCCAGAATGCGCA-CAGGGGCACCGTTTGTTGGTCATCGGCTTGCCGGCGAGACCCTTCACGATGACGTTGTAACGGTCAA-AGGCAATCATCGTCATGGTCCAGATCGAGGCACAGCCGAACATCACACAACCGTTAAAAAAAAACGAGATCATTCCGAAAATAAAGATGGCAAAACCTAGGATCGAGTGCCACAGCGGGTTCATGGGCGGGAACTGGTTCCAGTGGGGATGCACCATGTGGAGCATCTCTGGTGGGACCTTGTCCACCACGGACATGTTGCCACCGCTCTGCGTCCAGGCATCGAAGTGAGGTTCCACAAACGCAGCCATTGCTAATATTGGGAAAACGGTAGATGTTGTTTTGGTTTAGCTTTAAACAATATATTTAAGCTGAAGAAAATCGTTGTTACACGAACTACTTCAGCTACACAGCTAAAAGAATGTTTCCCT]

[+] EMBL CNS08WOL             [ATTTCATTGCCTTGCTTGCTTTGCTTCTTTATTGCATATTATTACAAACTCGTCAGGATCTAAGCTTTCTCGTCCGAGGCCTGGGTGGCACCCGACGCAACCGACTGGCCATCGTCGACTGGTGCATCCTGGCACGATAGCGACGGGAACTTCTGGTACAGGGCAGCGCGATACTTCGGATGGCTGATGCCGTACACGATCGGGTTGTAGACGGCGTTGGCCTTGGCGAACAGCGAGCCCCAAATGGTGGCCAGCGGGCTGATCGGGGCAGCCTTGAAGATTCCGGTGAAGTTGATGACCAGATACGGCGTCCAGGCCATGAACCAGAGCGAGATGGTGACCAGGGCGACCTTGGCCAGCTTCATCTCGGTGCTGGTGTTCTGGGCTTCCTGCGTACGCGAGCGAGGCGACGTTCATCTTCTTGGCCTGCTCGCGCATGTTCTTCTCGTGAGCGGACACAGCCTTCAGGATGAAGGTGTACGAGTAGATGATGGTCAGCAGCGGCAGCCAGTACACGAAGATGGCGTAGATGATGATGTACGAGCGGCTCAGCCACGTCTGGGTCAGGTAGTCGGTTCCGCA GCGGTCATGTTGCCCTCCGGCACGTATCGGTTCCATCCGAACAGCGGGGCCAGAATCCAGAACAGCGCGAACACCCACACGCCCAGAATGCGCA CAGGGGCACCGTTTGTTGGTCATCGGCTTGCCGGCGAGACCCTTCACGATGACGTTGTAACGGTCAA AGGCAATCATCGTCATGGTCCAGATCGAGGCACAGCCGAACATCACACAACCGTTAAAAAAAAACGAGATCATTCCGAAAATAAAGATGGCAAA                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS08WOK             [                                                                                                                                             GACGGGAACTTCTGGTACAGGGCAGCGCGATACTTCGGATGGCTGATGCCGTACACGATCGGGTTGTAGACGGCGTTGGCCTTGGCGAACAGCGAGCCCCAGATGGTGGCCAGCGGGCTGATCGGGGCAGCCTTGAAGATTCCGGTGAAGTTGATGACCAGATACGGCGTCCAGGCTTTTTTTTAGAGCGAGATGGTGACCAGGGCGACCTTGGCCAGCTTCATCTCGGTGCTGGTGTTCTGGGCTTCCTGCGTACGC AGCGAGGCGACGTTCATCTTCTTGGCCTG TCGCGCATGTTCTTCTCGTGAGCGGACACAGCCTTCAGGATGAAGGTGTACGAGTAGATGATGGTCAGCAGCGGCAGCCAGTACACGAAGATGGCGTAGATGATGATGTACGAGCGGCTCAGCCACGTCTGGGTCAGGTAGTCGGTTCCGCAGGCGGTCATGTTGCCCTCCGGCACGTATCGGTTCCATCCGAACAGCGGGGCCAGAGTCCAGAACAGCGCGAACACCCACACGCCCAGAATGCGCAGCA GGGCACCG TTGTTGGTCATCGGCTTGCCGGCGAGACCCTTCACGATGACGTTGTAACGGTCAAGAGGCAATCATCGTCATGGTCCAGATCGAGGCACAGCCGAACATCACACAACCGTTACCGGTCATCGAGATCATTCCGAGCATGAAGATGGCAAAACCTAGGATCGAGTGCCACAGCGGGTTCATGGGCGGGAACTGGTTCCAGTGGGGATGCACCATGTGGAGCATCTCTGGTGGGACCTTGTCCACCACGGACATGTTGCCACCGCTCTGCGTCCAGGCATCGAAGTGAGGTTCCACAAACGCAGCCATTGCTAATATTGGGAAAACGGTAGATGTTGTTTTGGTTTAGCTTTAAACAATATATTTAAGCTGAAGAAAATCGTTGTTACACGAACTACTTCAGCTACACAGCTAAAAGAATGTTTCCCT]


>consensus_6797#0 ATTTCATTGCCTTGCTTGCTTTGCTTCTTTATTGCATATTATTACAAACTCGTCAGGATC TAAGCTTTCTCGTCCGAGGCCTGGGTGGCACCCGACGCAACCGACTGGCCATCGTCGACT GGTGCATCCTGGCACGATAGCGACGGGAACTTCTGGTACAGGGCAGCGCGATACTTCGGA TGGCTGATGCCGTACACGATCGGGTTGTAGACGGCGTTGGCCTTGGCGAACAGCGAGCCC CAAATGGTGGCCAGCGGGCTGATCGGGGCAGCCTTGAAGATTCCGGTGAAGTTGATGACC AGATACGGCGTCCAGGCCATGAACCAGAGCGAGATGGTGACCAGGGCGACCTTGGCCAGC TTCATCTCGGTGCTGGTGTTCTGGGCTTCCTGCGTACGCGAGCGAGGCGACGTTCATCTT CTTGGCCTGCTCGCGCATGTTCTTCTCGTGAGCGGACACAGCCTTCAGGATGAAGGTGTA CGAGTAGATGATGGTCAGCAGCGGCAGCCAGTACACGAAGATGGCGTAGATGATGATGTA CGAGCGGCTCAGCCACGTCTGGGTCAGGTAGTCGGTTCCGCAGCGGTCATGTTGCCCTCC GGCACGTATCGGTTCCATCCGAACAGCGGGGCCAGAATCCAGAACAGCGCGAACACCCAC ACGCCCAGAATGCGCACAGGGGCACCGTTTGTTGGTCATCGGCTTGCCGGCGAGACCCTT CACGATGACGTTGTAACGGTCAAAGGCAATCATCGTCATGGTCCAGATCGAGGCACAGCC GAACATCACACAACCGTTAAAAAAAAACGAGATCATTCCGAAAATAAAGATGGCAAAACC TAGGATCGAGTGCCACAGCGGGTTCATGGGCGGGAACTGGTTCCAGTGGGGATGCACCAT GTGGAGCATCTCTGGTGGGACCTTGTCCACCACGGACATGTTGCCACCGCTCTGCGTCCA GGCATCGAAGTGAGGTTCCACAAACGCAGCCATTGCTAATATTGGGAAAACGGTAGATGT TGTTTTGGTTTAGCTTTAAACAATATATTTAAGCTGAAGAAAATCGTTGTTACACGAACT ACTTCAGCTACACAGCTAAAAGAATGTTTCCCT



consensusID : consensus_6797#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 986
fasta sequence
                              [AACAACACCGGTTCCGCGTTTATCCGCAAAACGACCGCCAGCCAGACCGGGACAGTTCCTCCCTACCGATACAGCACCAGTCCGTGCGCCCGTGGAGCGATGCCGCTAATCATCCCGAGCGAAGTTTGGCACCCCGGGAAGCGAATAGACGCGAAGAGTGTGTGTGCGTGTGTGTTAGTGCGTATGTTGGAAAGTTGTGTGTGCAGAGTAGCAATCATCCAAACCCCGCAAAAGCCCCGTCCGCTTGCACGGCCACCGTTGGTGTTCATTTGCAGTGCGCGCTCGTTAGTTTTTAGATGCAGTGAAGTGTTGTTATTTTGGTACGATATAGTTAGCATTTAAGTCCTGCAAACGGTCGCACATCGCTCGTTGCCATTGGGTTGTCGTTACGCGGAGAAGTAGCCGAAACAACTTTTGAGGAGCAGGCAGCATGAGCCACTCGAGAAATTATAACTACTACGAGCCCTCGCGGTCCCGCAGCCGGGAACGCAGCTACCGTCGAGAGTATCGCGACGATTCGGAACGCTACAATCCAGGCACATCGGAGTCGGGCCGCACACCGGCCGATTACGGTGGAAGCGCGGGAACGCGAGCGATGGGAACGGGACGCGAGATCAAGGGAGCATTACTACTACTACGACAGCTATTCCGGTCACGACCGCAGCCGCAACCGTTCCATGACGGGCCGGTCTGGCAGGAGCAGCGATTACTATCGCGGCGGAACCAGCATTCGCTGACAGTGGTGGACTTCCTCCAACCATGCACCCATCGCTGCTGGTTGAATCGGTTAAGGAAACGAGAAAACAAAAGAAACGCAGCATAAGGAGACAGGAAATAGGGAAAGAGAGAGAGAGAGAGAGAGTGAGAAGCACCGAATGAGAGCAGTGTGCGGGCAAGTTGTGTCCCTCTGTGTTTGCATATTGTTACGTCGCGGTGCGCACAATAAGGATAAGGAGGATTGTTAAGAGAGTAAAGCCTAGCCAAAA]

[+] EMBL CNS08JVJ             [AACAACACCGGTTCCGCGTTTATCCGCAAAACGACCGCCAGCCAGACCGGGACAGTTCCTCCCTACCGATACAGCACCAGTCCGTGCGCCCGTGGAGCGATGCCGCTAATCATCCCGAGCGAAGTTTGGCACCCCGGGAAGCGAATAGACGCGAAGAGTGTGTGTGCGTGTGTGTTAGTGCGTATGTTGGAAAGTTGTGTGTGCAGAGTAGCAATCATCCAAACCCCGCAAAAGCCCCGTCCGCTTGCACGGCCACCGTTGGTGTTCATTTGCAGTGCGCGCTCGTTAGTTTTTAGATGCAGTGAAGTGTTGTTATTTTGGTACGATATAGTTAGCATTTAAGTCCTGCAAACGGTCGCACATCGCTCGTTGCCATTGGGTTGTCGTTACGCGGAGAAGTAGCCGAAACAACTTTTGAGGAGCAGGCAGCATGAGCCACTCGAGAAATTATAACTACTACGAGCCCTCGCGGTCCCGCAGCCGGGAACGCAGCTACCGTCGAGAGTATCGCGACGATTCGGAACGCTACAATCCAGGCACATCGGAGTCGGGCCGCACACCGGCCGATTACGGTGGAAGCGCGGGAACGCGAGCGATGGGAACGGGACGCGAGATCAAGGGAGCATTACTACTACTACGACAGCTATTCCGGTCACGACCGCAGCCGCAACCGTTCCATGACGGGCCGGTCTGGCAGGAGCAGCGATTACTATCGCGGCGGAACCAGCATTCGCTGACAGTGGTGGACTTCCTCCAACCATGCACCCATCGCTGCTGGTTGAATCGGTTAAGGAAACGAGAAAACAAAAGAAACGCAGCATAAGGAGACAGGAAATAGGGAAAGAGAGAGAGAGAGAGAGAGTGAGAAGCACCGAATGAGAGCAGTGTGCGGGCAAGTTGTGTCCCTCTGTGTTTGCATATTGTTACGTCGCGGTGCGCACAATAAGGATAAGGAGGATTGTTAAGAGAGTAAAGCCTAGCCAAAA]


>consensus_6797#1 AACAACACCGGTTCCGCGTTTATCCGCAAAACGACCGCCAGCCAGACCGGGACAGTTCCT CCCTACCGATACAGCACCAGTCCGTGCGCCCGTGGAGCGATGCCGCTAATCATCCCGAGC GAAGTTTGGCACCCCGGGAAGCGAATAGACGCGAAGAGTGTGTGTGCGTGTGTGTTAGTG CGTATGTTGGAAAGTTGTGTGTGCAGAGTAGCAATCATCCAAACCCCGCAAAAGCCCCGT CCGCTTGCACGGCCACCGTTGGTGTTCATTTGCAGTGCGCGCTCGTTAGTTTTTAGATGC AGTGAAGTGTTGTTATTTTGGTACGATATAGTTAGCATTTAAGTCCTGCAAACGGTCGCA CATCGCTCGTTGCCATTGGGTTGTCGTTACGCGGAGAAGTAGCCGAAACAACTTTTGAGG AGCAGGCAGCATGAGCCACTCGAGAAATTATAACTACTACGAGCCCTCGCGGTCCCGCAG CCGGGAACGCAGCTACCGTCGAGAGTATCGCGACGATTCGGAACGCTACAATCCAGGCAC ATCGGAGTCGGGCCGCACACCGGCCGATTACGGTGGAAGCGCGGGAACGCGAGCGATGGG AACGGGACGCGAGATCAAGGGAGCATTACTACTACTACGACAGCTATTCCGGTCACGACC GCAGCCGCAACCGTTCCATGACGGGCCGGTCTGGCAGGAGCAGCGATTACTATCGCGGCG GAACCAGCATTCGCTGACAGTGGTGGACTTCCTCCAACCATGCACCCATCGCTGCTGGTT GAATCGGTTAAGGAAACGAGAAAACAAAAGAAACGCAGCATAAGGAGACAGGAAATAGGG AAAGAGAGAGAGAGAGAGAGAGTGAGAAGCACCGAATGAGAGCAGTGTGCGGGCAAGTTG TGTCCCTCTGTGTTTGCATATTGTTACGTCGCGGTGCGCACAATAAGGATAAGGAGGATT GTTAAGAGAGTAAAGCCTAGCCAAAA



consensusID : consensus_6797#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 959
fasta sequence
                              [GAATTGCCCCGAGGGTTTTAAGAAAATGACGCGGTCGAAGAATCGGTCCGACTCGGAGGAATCGGAAAAGGCCGACAAGAAGCAGCGCGGTCGTGAGAAGGAGCGTAAAAAGCGTACCTCTAGCAGCAGCGACAGCAGCGGAAGCTCATCGGACAGCAGCTCCTCGCGCAGCAGTTCCCGGTTCGCGGTCCGAGGCTTCGGTCCAAGCAAGCAAGCTTCGGTTCCTCGGTTCCAAGGCTTCCTTCGGGTTCGGTCGGTTCCAAGCCAGCNGGGTGGCCCGGAGGCGGTTTCAACGGCAACCAAAGGCGCCAANAAACGGAAACAACCCGGTTCCCGGGTCGCCGGGTTCGGCCGCCAAGGCAAAGAGGCCCCGGGACCCAAACCGGGCCCAAAAAGGCTTGGGGAACCAAAACAAGGTTCCTGCACCGGCCAACTGGCCAAAGGGAAACCTGCCCGGTTAAAANGGGGCACCCGAGGCTGGTTGCCGNGGTTCCCAAAGTTCCGAAACGGGAGGAACAAACCCGGAAACGCCCTAGGCAGGTTCCGGGAAACCCTGCNGCGAACAATTGACCAAGGAAAACAAAGGCAAGTGCCCCTGGGACGNCCCGATTCGGGTCCGAACAAAGGTTCGATCCAAAGAGGACGTTCGCNGACCAAGCAGCCCGGGCCCGCGTCCGACGGGATCCCTGGGATTCGGTNCCGAATAGGCTGGCCTANATGGCCCGTTTCAGGACCTGGAATACGGTTTACCCCTGGTTCAACTNGCCACCTGGCATGGCCCCCTGGGNGTTTAAACAGGCCAATTTTCCCAACTAATTTCAGGTAGTCTGCCCTNGTGGCTCTTTAGGAACCTGCCTATGCCAANAACCGGTTTAAAACCCCCGGTTAGCACTTCCAACGCGAACTTATGAGGTTTAGCGCGCACAACAATTTCCTTTTTCCAAACGAGCCNTTACCAG]

[+] EMBL AL693540             [GAATTGCCCCGAGGGTTTTAAGAAAATGACGCGGTCGAAGAATCGGTCCGACTCGGAGGAATCGGAAAAGGCCGACAAGAAGCAGCGCGGTCGTGAGAAGGAGCGTAAAAAGCGTACCTCTAGCAGCAGCGACAGCAGCGGAAGCTCATCGGACAGCAGCTCCTCGCGCAGCAGTTCCCGGTTCGCGGTCCGAGGCTTCGGTCCAAGCAAGCAAGCTTCGGTTCCTCGGTTCCAAGGCTTCCTTCGGGTTCGGTCGGTTCCAAGCCAGCNGGGTGGCCCGGAGGCGGTTTCAACGGCAACCAAAGGCGCCAANAAACGGAAACAACCCGGTTCCCGGGTCGCCGGGTTCGGCCGCCAAGGCAAAGAGGCCCCGGGACCCAAACCGGGCCCAAAAAGGCTTGGGGAACCAAAACAAGGTTCCTGCACCGGCCAACTGGCCAAAGGGAAACCTGCCCGGTTAAAANGGGGCACCCGAGGCTGGTTGCCGNGGTTCCCAAAGTTCCGAAACGGGAGGAACAAACCCGGAAACGCCCTAGGCAGGTTCCGGGAAACCCTGCNGCGAACAATTGACCAAGGAAAACAAAGGCAAGTGCCCCTGGGACGNCCCGATTCGGGTCCGAACAAAGGTTCGATCCAAAGAGGACGTTCGCNGACCAAGCAGCCCGGGCCCGCGTCCGACGGGATCCCTGGGATTCGGTNCCGAATAGGCTGGCCTANATGGCCCGTTTCAGGACCTGGAATACGGTTTACCCCTGGTTCAACTNGCCACCTGGCATGGCCCCCTGGGNGTTTAAACAGGCCAATTTTCCCAACTAATTTCAGGTAGTCTGCCCTNGTGGCTCTTTAGGAACCTGCCTATGCCAANAACCGGTTTAAAACCCCCGGTTAGCACTTCCAACGCGAACTTATGAGGTTTAGCGCGCACAACAATTTCCTTTTTCCAAACGAGCCNTTACCAG]


>consensus_6797#2 GAATTGCCCCGAGGGTTTTAAGAAAATGACGCGGTCGAAGAATCGGTCCGACTCGGAGGA ATCGGAAAAGGCCGACAAGAAGCAGCGCGGTCGTGAGAAGGAGCGTAAAAAGCGTACCTC TAGCAGCAGCGACAGCAGCGGAAGCTCATCGGACAGCAGCTCCTCGCGCAGCAGTTCCCG GTTCGCGGTCCGAGGCTTCGGTCCAAGCAAGCAAGCTTCGGTTCCTCGGTTCCAAGGCTT CCTTCGGGTTCGGTCGGTTCCAAGCCAGCNGGGTGGCCCGGAGGCGGTTTCAACGGCAAC CAAAGGCGCCAANAAACGGAAACAACCCGGTTCCCGGGTCGCCGGGTTCGGCCGCCAAGG CAAAGAGGCCCCGGGACCCAAACCGGGCCCAAAAAGGCTTGGGGAACCAAAACAAGGTTC CTGCACCGGCCAACTGGCCAAAGGGAAACCTGCCCGGTTAAAANGGGGCACCCGAGGCTG GTTGCCGNGGTTCCCAAAGTTCCGAAACGGGAGGAACAAACCCGGAAACGCCCTAGGCAG GTTCCGGGAAACCCTGCNGCGAACAATTGACCAAGGAAAACAAAGGCAAGTGCCCCTGGG ACGNCCCGATTCGGGTCCGAACAAAGGTTCGATCCAAAGAGGACGTTCGCNGACCAAGCA GCCCGGGCCCGCGTCCGACGGGATCCCTGGGATTCGGTNCCGAATAGGCTGGCCTANATG GCCCGTTTCAGGACCTGGAATACGGTTTACCCCTGGTTCAACTNGCCACCTGGCATGGCC CCCTGGGNGTTTAAACAGGCCAATTTTCCCAACTAATTTCAGGTAGTCTGCCCTNGTGGC TCTTTAGGAACCTGCCTATGCCAANAACCGGTTTAAAACCCCCGGTTAGCACTTCCAACG CGAACTTATGAGGTTTAGCGCGCACAACAATTTCCTTTTTCCAAACGAGCCNTTACCAG



consensusID : consensus_6797#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 649
fasta sequence
                              [CCGCCCACGCGTCCGAATTTCTTCGAAGAGCGGCAAGGCGGAGAATCAATCATGAGCTGCCGGTTGCTGCTGGTTTGTCTGTGTGCCCTGGTGGCGGTGGCGTTTGCCGGTGAAGCCGACGTGCTGGATCTGACCGATAGCGATTTTTCGACCCGCGTCGCGGAGACGGAAACCACCCTTGTGATGTTCTACGCACCATGGTGCGGACACTGCAAAAAGCTCAAGCCCGAGTATGCCAAGGCAGCGGAGCTGCTACGTGGCGAAGATCCTCCGATCGCGCTGGCCAAGGTCGACTGTACCGAGGGCGGTAAGGACACGTGTAACAAGTTCAGCGTCAGCGGCTATCCCACCCTGAAGGTGTTCAAGAACGGCGAGGTGTCGCAGGAGTACAACGGCCCGCGCGAAGCGACCGGCATTGCCAAGTACATGAAATCGATCGTCGGACCGGCCTCGAAGGATCTGCTGACGGTGGAAGCGTTCGAAGCGTTCCTGAAGGTGCAGGAAACGTCCGTGGTCGGGTTCTTCCAGAAGGAGTCGGAGCTGAAGGGTGTCTTCCTGAAGTACGCTGACAGCCAGCGCGAGCGGCTACGCTTCGGTCACAGCAGTGCGCCGGCCGTACTGGAGAAGCAGGGCGAAACCGATGCCGTAT]

[+] EMBL BM612817             [CCGCCCACGCGTCCGAATTTCTTCGAAGAGCGGCAAGGCGGAGAATCAATCATGAGCTGCCGGTTGCTGCTGGTTTGTCTGTGTGCCCTGGTGGCGGTGGCGTTTGCCGGTGAAGCCGACGTGCTGGATCTGACCGATAGCGATTTTTCGACCCGCGTCGCGGAGACGGAAACCACCCTTGTGATGTTCTACGCACCATGGTGCGGACACTGCAAAAAGCTCAAGCCCGAGTATGCCAAGGCAGCGGAGCTGCTACGTGGCGAAGATCCTCCGATCGCGCTGGCCAAGGTCGACTGTACCGAGGGCGGTAAGGACACGTGTAACAAGTTCAGCGTCAGCGGCTATCCCACCCTGAAGGTGTTCAAGAACGGCGAGGTGTCGCAGGAGTACAACGGCCCGCGCGAAGCGACCGGCATTGCCAAGTACATGAAATCGATCGTCGGACCGGCCTCGAAGGATCTGCTGACGGTGGAAGCGTTCGAAGCGTTCCTGAAGGTGCAGGAAACGTCCGTGGTCGGGTTCTTCCAGAAGGAGTCGGAGCTGAAGGGTGTCTTCCTGAAGTACGCTGACAGCCAGCGCGAGCGGCTACGCTTCGGTCACAGCAGTGCGCCGGCCGTACTGGAGAAGCAGGGCGAAACCGATGCCGTAT]


>consensus_6797#3 CCGCCCACGCGTCCGAATTTCTTCGAAGAGCGGCAAGGCGGAGAATCAATCATGAGCTGC CGGTTGCTGCTGGTTTGTCTGTGTGCCCTGGTGGCGGTGGCGTTTGCCGGTGAAGCCGAC GTGCTGGATCTGACCGATAGCGATTTTTCGACCCGCGTCGCGGAGACGGAAACCACCCTT GTGATGTTCTACGCACCATGGTGCGGACACTGCAAAAAGCTCAAGCCCGAGTATGCCAAG GCAGCGGAGCTGCTACGTGGCGAAGATCCTCCGATCGCGCTGGCCAAGGTCGACTGTACC GAGGGCGGTAAGGACACGTGTAACAAGTTCAGCGTCAGCGGCTATCCCACCCTGAAGGTG TTCAAGAACGGCGAGGTGTCGCAGGAGTACAACGGCCCGCGCGAAGCGACCGGCATTGCC AAGTACATGAAATCGATCGTCGGACCGGCCTCGAAGGATCTGCTGACGGTGGAAGCGTTC GAAGCGTTCCTGAAGGTGCAGGAAACGTCCGTGGTCGGGTTCTTCCAGAAGGAGTCGGAG CTGAAGGGTGTCTTCCTGAAGTACGCTGACAGCCAGCGCGAGCGGCTACGCTTCGGTCAC AGCAGTGCGCCGGCCGTACTGGAGAAGCAGGGCGAAACCGATGCCGTAT



consensusID : consensus_6797#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 90
fasta sequence
                              [GCAGATCGCCGTCGACAAGCAGTACAAGCGGTATCGTCGATCGCTTCGTTCGCATCCCGAAGAGACAGAGGAATCGGTGCCTTCTGGCGC]

[+] EMBL CNS092H2             [GCAGATCGCCGTCGACAAGCAGTACAAGCGGTATCGTCGATCGCTTCGTTCGCATCCCGAAGAGACAGAGGAATCGGTGCCTTCTGGCGC]


>consensus_6797#4 GCAGATCGCCGTCGACAAGCAGTACAAGCGGTATCGTCGATCGCTTCGTTCGCATCCCGA AGAGACAGAGGAATCGGTGCCTTCTGGCGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6797#1      ------------------------------------------------------------
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      ATTTCATTGCCTTGCTTGCTTTGCTTCTTTATTGCATATTATTACAAACTCGTCAGGATC 60
consensus_6797#3      ------------------------------------------------------------
consensus_6797#2      ------------------------------------------------------------
                                                                                  

consensus_6797#1      ---------------------------AACAACACCGGTTCCGCGTTTATCCGCAAAACG 33
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      TAAGCTTTCTCGTCCGAGGCCTGGGTGGCACCCGACGCAACCGACTGGCCATCGTCGACT 120
consensus_6797#3      ----------------------------CCGCCCACGCGTCCGAATTTCTTCGAAGAGCG 32
consensus_6797#2      --------------------------------GAATTGCCCCGAGGGTTTTAAGAAAATG 28
                                                                                  

consensus_6797#1      ACCGCCAGCCAGACCGGGACAGTTCCTCCCTACCGATACAGCACCAGTCCGTGCGCCCGT 93
consensus_6797#4      -----------------------------------GCAGATCGCC-GTCGACAAGCAGTA 24
consensus_6797#0      GGTGCATCCTGGCACGATAGCGACGGGAACTTCTGGTACAGGGCAGCGCGATACTTCGGA 180
consensus_6797#3      GCAAGGCGGAGAATCAATCATGA--GCTGCCGGTTGCTGCTGGTTTGTCTGTGTGCCCTG 90
consensus_6797#2      ACGCGGTCGAAGAATCGGTCCGACTCGGAGGAATCGGAAAAGGCC-GACAAGAAGCAGCG 87
                                                                      *           

consensus_6797#1      GGAGCG------ATGCCGC---TAATCATCCCGAGCGAAGT-TTGGCACCC-CGGGAAGC 142
consensus_6797#4      CAAGCG------GTATCGT---CGATCGCTTCG---------TTCGCATCC-CGAAGAGA 65
consensus_6797#0      TGGCTG------ATGCCGTACACGATCGGGTTGTAGACGGCGTTGGCCTTGGCGAACAGC 234
consensus_6797#3      GTGGCG------GTGGCGT---TTGCCGGTGAAGCCGACGTGCTGGATCTGACCGATAGC 141
consensus_6797#2      CGGTCGTGAGAAGGAGCGTA-AAAAGCGTACCTCTAGCAGCAGCGACAGCAGCGGAAGCT 146
                           *          **        *                         *       

consensus_6797#1      GAATAG-ACGCGAAGAGTGTGTGTGCGTGTGTGTTAGTGCGTATGTTGGAAAGTTGTGTG 201
consensus_6797#4      CAGAGG-AATCGGTGCCTTCTGGCGC---------------------------------- 90
consensus_6797#0      GAGCCCCAAATGGTGGCCAGCGGGCTGATCGGGGCAGCCTTGAAGATTCCGGTGAAGTTG 294
consensus_6797#3      GATTTT---TCGACCCGCGTCGCGGAGACGGAAACCACCCTTGTGATGTTCTACGCACCA 198
consensus_6797#2      CATCGG---ACAGCAGCTCCTCGCGCAGCAGTTCCCGGTTCGCGGTCCGAGGCTTCGGTC 203
                       *                                                          

consensus_6797#1      TGCAGAGTAGCAATCATCCAAACCCCGCAAAAGCCCCGTCCGCTTGCACGGCCACCGTTG 261
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      ATGACCAGATACGGCGTCCAGGCCATGAACCAGAGCGAGATGGTGACCAGGGCGACCTTG 354
consensus_6797#3      TGGTGCGGACACTGCAAAAAGCTCAAGCCCGAGTATGCCAAGGCAGCGGAGCTGCTACGT 258
consensus_6797#2      CAAGCAAGCAAGCTTCGGTTCCTCGGTTCCAAGGCTTCCTTCGGGTTCGGTCGGTTCCAA 263
                                                                                  

consensus_6797#1      GT--GTTCATTTGCAGTGCGCGCTCGTTAGTTTTTAGATGCAGTGAAGTGTTGTTATTTT 319
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      GCCAGCTTCATCTCGGTGCTGGTGTTCTGGGCTTCCTGCGTACGCGAGCGAGGCGACGTT 414
consensus_6797#3      GGCGAAGATCCTCCGATCGCGCTGGCCAAGGTCGACTGTACCGAGGGCGGTAAGGACACG 318
consensus_6797#2      GCCAGCNGGGTGGCCCGGAGGCGGTTTCAA---CGGCAACCAAAGGCGCCAANAAACGGA 320
                                                                                  

consensus_6797#1      GGTA-CGATATAGTTAG-CATTTAAGTCCTGCAAACGGTCGCACATCGCTCGTTGCCATT 377
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      CATC-TTCTTGGCCTGCTCGCGCATGTTCTTCTCGTGAGCGGACACAGCCTTCAGGATGA 473
consensus_6797#3      TGTAACAAGTTCAGCGTCAGCGGCTATCCCACCCTGAAGGTGTTCAAGAACGGCGAGGTG 378
consensus_6797#2      AACAACCCGGTTCCCGGGTCGCCGGGTTCGGCCGCCAAGGCAAAGAGGCCCCGGGACCCA 380
                                                                                  

consensus_6797#1      GGGTTGTCGTTACGCGGAGAAGTAGCCGAAACAACTTTTGAGGAGCAGGCAGCATGAGCC 437
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      AGGTGTACGAGTAGATGATGGTCAGCAGCGGCAGCC-----AGTACACGAAGATGGCGTA 528
consensus_6797#3      TCGCAGGAGTACAACGGCCCGCGCGAAGCGACCGGCATTGCCAAGTACATGAAATCGATC 438
consensus_6797#2      AACCGGGCCCAAAAAGGCTTGGGGAACCAAAACAAGGTTCCTGCACCGGCCAACTGGCCA 440
                                                                                  

consensus_6797#1      ACTCGAGAAATTATAACTACTACGAGCCCTCGCGGTCCCGCAGCCGGGAACGCAGCTACC 497
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      GATGATGATGTACGAGCGGCTCAGCCACGTCTGGGTCAGGTAGTCGGTTCCGCAGCGGTC 588
consensus_6797#3      GTCGGACCGGCCTCGAAGGATCTGCTGACGGTGGAAGCGTTCGAAGCGTTCCTGAAGGTG 498
consensus_6797#2      AAGGGAAACCTGCCCGGTTAAAANGGGGCACCCGAGGCTGGTTGCCGNGGTTCCCAAAGT 500
                                                                                  

consensus_6797#1      GTCGAGAGTATCGCGACGATTCGGAACGCTACAATCCAGGCACATCGGAGTCGGGCCGCA 557
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      ATGTTGCCCTCCGGCACGTATCGGTTCCATCCGAACAGCGGGGCCAGAATCCAGAACAGC 648
consensus_6797#3      CAGGAAACGTCCGTGGTCGGGTTCTTCCAGAAGGAGTCGGAGCTGAAGGGTGTCTTCCTG 558
consensus_6797#2      TCCGAAACGGGAGGAACAAACCCGGAAACGCCCTAGGCAGGTTCCGGGAAACCCTGCNGC 560
                                                                                  

consensus_6797#1      CACCGGCCGATTACGGTGGAAGCGCGGGAACGCGAGCGATGGGAACGGGACGCGAGATCA 617
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      GCGAACACCCACACGCCCAGAATGCGCACAGGGGCACCGTTTGTTGGTCATCGGCTTGCC 708
consensus_6797#3      AAGTACGCTGACAGCCAGCGCGAGCGGCTACGCTTCGGTCACAGCAGTGCGCCGGCCGTA 618
consensus_6797#2      GAACAATTGACCAAGGAAAACAAAGGCAAGTGCCCCTGGGACGNCCCGATTCGGGTCCGA 620
                                                                                  

consensus_6797#1      AGGGAGCATTACTACTACTACGACAGCTATTCCGGTCACGACCGCAGCCGCAACC--GTT 675
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      GGCGAGACCCTTCACGATGACGTTGTAACGGTCAAAGGCAATCATCGTCATGGTCCAGAT 768
consensus_6797#3      CTGGAGAAGCAGGGCGAAACCGATGCCGTAT----------------------------- 649
consensus_6797#2      ACAAAGGTTCGATCCAAAGAGGACGTTCGCNGACCAAGCAGCCCGGGCCCGCGTCC-GAC 679
                                                                                  

consensus_6797#1      CCATGACGGGCCGGTCTGGCAGGAGCAGCGATTACTATCGCGGCGGAACCAGCATTCGCT 735
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      CGAGGCACAGCCGAACATCACACAACCGTTAAAAAAAAACGAGATCATTCCGAAAATAAA 828
consensus_6797#3      ------------------------------------------------------------
consensus_6797#2      GGGATCCCTGGGATTCGGTNCCGAATAGGCTGGCCTANATGGCCCGTTTCAGGACCTGGA 739
                                                                                  

consensus_6797#1      GACAGTGGTGGACTTCCTCCAACCATGCACCCATCGCTGCTGGTTGAATCGGTTAAGGAA 795
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      GATGGCAAAACCTAGGATCGAGTGCCACAGCGGGTTCATGGGCGGGAACTGGTTCCAGTG 888
consensus_6797#3      ------------------------------------------------------------
consensus_6797#2      ATACGGTTTACCCCTGGTTCAACTNGCCACCTGGCATGGCCCCCTGGGNGTTTAAACAGG 799
                                                                                  

consensus_6797#1      ACGAGAAAACAAAAGAAACGCAGCATAAGGAGACAGGAAATAGGGAAAGAGAGAGAGAGA 855
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      GGGATGCACCATGTGGAGCATCTCTGGTGGGACCTTGTCCACCACGGACATGTTGCCACC 948
consensus_6797#3      ------------------------------------------------------------
consensus_6797#2      CCAATTTTCCCAACTAATTTCAGGTAGTCTGCCCTNGTGGCTCTTTAGGAACCTGCCTAT 859
                                                                                  

consensus_6797#1      GAGAGAGTGAGAAGCACCGAATGAGAGCAGTGTGCGGGCAAGTTGTGTCCCTCTGTGTTT 915
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      GCTCTGCGTCCAGGCATCGAAGTGAGGTTCCACAAACGCAGCCATTGCTAATATTGGGAA 1008
consensus_6797#3      ------------------------------------------------------------
consensus_6797#2      GCCAANAACCGGTTTAAAACCCCCGGTTAGCACTTCCAACGCGAACTTATGAGGTTTAGC 919
                                                                                  

consensus_6797#1      GCATATTGTTACGTCGCGGTGCGCACAATAAGGATAAGGAGGATTGTTAAGAGAGTAAAG 975
consensus_6797#4      ------------------------------------------------------------
consensus_6797#0      AACGGTAGATGTTGTTTTGGTTTAGCTTTAAACAATATATTTAAGCTGAAGAAAATCGTT 1068
consensus_6797#3      ------------------------------------------------------------
consensus_6797#2      GCGCACAACAATTTCCTTTTTCCAAACGAGCCNTTACCAG-------------------- 959
                                                                                  

consensus_6797#1      CCTAGCCAAAA---------------------------------- 986
consensus_6797#4      ---------------------------------------------
consensus_6797#0      GTTACACGAACTACTTCAGCTACACAGCTAAAAGAATGTTTCCCT 1113
consensus_6797#3      ---------------------------------------------
consensus_6797#2      ---------------------------------------------
                                                                   




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)