These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6836#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 868 fasta sequence [AGCAGAATCGGCACGAGGTTGTATACACACAAAAAAACCCGTCTCAAATCCCGCACTCGTTTGTACAA-AATCTCCAACACCCTCTGCTCTGTGTGATCGCAAAATGAAATGAACAAACAAAAAAACAAACAAATTGCGCACCATCAACAACGTCGTCGTCGTCGTCGTCG-TCGGGCAGGTCATGAATCCGCTCGACGCTCAGTGCAACGTCCAGCGGGACGATGCCATCTGTGTGAGCCAGCTGAAGAACGCCAA-GGAGATTGACCGGGCGCTGCTGCAGGAGAAGCCGGACGTGAAGATTTTCCTGCCGTTCCGC-TTCTACCTC-TACCGCCCGGAGGAACTGTTCCAGCCGAACAC-GTACAACCGTTTCCTGGTCGCCCCGACCGGAGATCATGTCATTTCGCTGATTGACGAAATTTCGTACCTGTCCGCGCCGGCCCCG-CTGC-TGTCCCAGTACGACGACA-TTAACCCGGAGCAGT-TCTGCAACGGTGACAACCGGCCGGCCGACTGCGGTGCCAACTGCATGTGCACGCACAAGGTCGACATTCCGCTCAATGCCATCGTGGAGGTCGTTCTTGTCGACGAAGTCCAACAACCGAATCTGAGCCATCCGTTCCATCTGCACGGTTACGCGTACAACGTGATCGGTATTGGCCGCTCACCGGACTCGAACGTCAAGAAGATTAACCTGAAGCACGCGCTCGACCTCGATCGGCGCGGTCTGCTCCACCGGCAGTACAACCTGGCCCCGCTCAAGGACACCATTGCCGTCCCGAACAACGGATACGTCGTGCTGCGATTCCGTGCCGACAATCCAGGGATTCTGGCTGNTCCACTGTCACTTCCTGTTCCACATCGTGATAGGAAT] [+] EMBL BX469444 [AGCAGAATCGGCACGAGGTTGTATACACACAAAAAAACCCGTCTCAAATCCCGCACTCGTTTGTACAACAATCTCCAACACCCTCTGCTCTGTGTGATCGCAAAATGAAATGAACAAACAAAAAAACAAACAAATTGCGCACCATCAACAACGTCGTCGTCGTCGTCGTCGNTCGGGCAGGTCATGAATCCGCTCGACGCTCAGTGCAACGTCCAGCGGGACGATGCCATCTGTGTGAGCCAGCTGAAGAACGCCAAGGGAGATTGACCGGGCGCTGCTGCAGGAGAAGCCGGACGTGAAGATTTTCCTGCCGTTCCGCGTTCTACCTCGTACCGCCCGGAGGAACTGTTCCAGCCGAACACGGTACAACCGTTTCCTGGTCGCCCCGACCGGAGATCATGTCATTTCGCTGATTGACGAAATTTCGTACCTGTCCGCGCCGGCCCCGNGTGCATGTCCCAGTACGACGACAGTTAACCCGGAGCAGTGTCTGCAACGGTGACAACCGGNCGGCCGACTGCGGT ] [+] EMBL BX628072 [ ATCCCGCACTCGTTTGTACAA AATCTCCAACACCCTCTGCTCTGTGTGATCGCAAAATGAAATGAACAAACAAAAAAACAAACAAATTGCGCACCATCAACAACGTCGTCGTCGTCGTCGTCG TCGGGCAGGTCATGAATCCGCTCGACGCTCAGTGCAACGTCCAGCGGGACGATGCCATCTGTGTGAGCCAGCTGAAGAACGCCAA GGAGATTGACCGGGCGCTGCTGCAGGAGAAGCCGGACGTGAAGATTTTCCTGCCGTTCCGC TTCTACCTC TACCGCCCGGAGGAACTGTTCCAGCCGAACAC GTACAACCGTTTCCTGGTCGCCCCGACCGGAGATCATGTCATTTCGCTGATTGACGAAATTTCGTACCTGTCCGCGCCGGCCCCG CTGC TGTCCCAGTACGACGACA TTAACCCGGAGCAGT TCTGCAACGGTGACAACCGGCCGGCCGACTGCGGTGCCAACTGCATGTGCACGCACAAGGTCGACATTCCGCTCAATGCCATCGTGGAGGTCGTTCTTGTCGACGAAGTCCAACAACCGAATCTGAGCCATCCGTTCCATCTGCACGGTTACGCGTACAACGTGATCGGTATTGGCCGCTCACCGGACTCGAACGTCAAGAAGATTAACCTGAAGCACGCGCTCGACCTCGATCGGCGCGGTCTGCTCCACCGGCAGTACAACCTGGCCCCGCTCAA ] [+] EMBL BX625059 [ AGAAGCCGGACGTGAAGATTTTCCTGCCGTTCCGC TTCTACCTC TACCGCCCGGAGGAACTGTTCCAGCCGAACAC GTACAACCGTTTCCTGGTCGCCCCGACCGGAGATCATGTCATTTCGCTGATTGACGAAATTTCGTACCTGTCCGCGCCGGCCCCG CTGC TGTCCCAGTACGACGACA TTAACCCGGAGCAGT TCTGCAACGGTGACAACCGGCCGGCCGACTGCGGTGCCAACTGCATGTGCACGCACAAGGTCGACATTCCGCTCAATGCCATCGTGGAGGTCGTTCTTGTCGACGAAGTCCAACAACCGAATCTGAGCCATCCGTTCCATCTGCACGGTTACGCGTACAACGTGATCGGTATTGGCCGCTCACCGGACTCGAACGTCAAGAAGATTAACCTGAAGCACGCGCTCGACCTCGATCGGCGCGGTCTGCTCCACCGGCAGTACAACCTGCCCCCGCTCAAGGACACCATTGCCGTCCCGAACAACGGATACGTCGTGCTGCGATTCCGTGCCGACAATCCAGGGATTCTGGCTGNTCCACTGTCACTTCCTGTTCCACATCGTGATAGGAAT] consensusID : consensus_6836#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 646 fasta sequence [CAGAATTCCCCGCAGGTTATTACGCCCGGGCGCCGCTATCGGTTCGCTATGATCAACGCGTTCGCTATCCGTCTGCCCGGCCAGGTTACGATCGAGGGACATGCGCTGACGGTGATTGCGACCGACGGCGTAGCCGGTGCATACCGGTGCAAGTCAACACCATCATCTCGTTCTCAGTGCGAACGTTACGATTTCGTCATCACCGTGACCAGCCTGGTCGGTGCGTACTGGATCCAGCTGCGNAGGACTCGGCGAGATGCGGCATCAAGCGTGCCCAGCAGCTGGNCATCCTGCGCTATGCTCGCGGCACCTACCAGCCTGCTCGCCGACCCCAACTACGACAGTCGGACTTCCGNAGGGCGTTGTCATGAATCCGCTCGAGCTCAGTGCAACGTCCAGCTGGGACGATGCCATCTGTGTNGAGGCCAGCTGAACGAACGCCAAGGCAGNATTGACCGGGCGCTGCTGCACGGCACGNAACGCCGGCACGTGAAGATTTCTCCTGCCGTTACGCTTCTACCCTACACGCCCGGCAGGAANCTGTNCCAGCCGAAACACGGTACAACCCGCTCATCCATGNCATCCGCCCCCGACCGGCAGCATCACTGCTCAATAAACAGCCTAGATATGACCGAACACTCNCCCG] [+] EMBL AL694943 [CAGAATTCCCCGCAGGTTATTACGCCCGGGCGCCGCTATCGGTTCGCTATGATCAACGCGTTCGCTATCCGTCTGCCCGGCCAGGTTACGATCGAGGGACATGCGCTGACGGTGATTGCGACCGACGGCGTAGCCGGTGCATACCGGTGCAAGTCAACACCATCATCTCGTTCTCAGTGCGAACGTTACGATTTCGTCATCACCGTGACCAGCCTGGTCGGTGCGTACTGGATCCAGCTGCGNAGGACTCGGCGAGATGCGGCATCAAGCGTGCCCAGCAGCTGGNCATCCTGCGCTATGCTCGCGGCACCTACCAGCCTGCTCGCCGACCCCAACTACGACAGTCGGACTTCCGNAGGGCGTTGTCATGAATCCGCTCGAGCTCAGTGCAACGTCCAGCTGGGACGATGCCATCTGTGTNGAGGCCAGCTGAACGAACGCCAAGGCAGNATTGACCGGGCGCTGCTGCACGGCACGNAACGCCGGCACGTGAAGATTTCTCCTGCCGTTACGCTTCTACCCTACACGCCCGGCAGGAANCTGTNCCAGCCGAAACACGGTACAACCCGCTCATCCATGNCATCCGCCCCCGACCGGCAGCATCACTGCTCAATAAACAGCCTAGATATGACCGAACACTCNCCCG] consensusID : consensus_6836#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 558 fasta sequence [TTTCGTCATCACCGCTGACCAGCCGGTCGGTGCGTACTGGATCCAGCTGCGAGGACTCGTGCGAGTGCGGCATCAAGCGTGCCCAGCAGCTGGCCATCCTGCGCTATGCTCGCGGCCCCTACCAGCCTGCCTCGCCGCCCCCAACCTACGACGTCGGACTTCCGCAGGGCGTTGTCATGAATCCGCTCGACGCTCAGTGCAACGTCCAGCGGGACGATGCCATCTGTGTGAGCCAGCTGAAGAACGCCAAGGAGATTGACCGGGCGCTGCTGCAGGAGAAGCCGGACGTGAAGATTTTCCTGCCGTTCCGCTTCTACCTCTACCGCCCGGAGGAACTGTTCCAGCCGAACACGTACAACCGTTTCCTGGTCGCCCCGACCGGAGATCATGTCATTTCGCTGATNGACGAAATTTCGTACCTGTCCGCGCCGGCCCCGCTGCTGTCCCAGTACGACGACATTAACCCGGAGCAGTNNTGCAACGGTGACAACCGGCCCGCCGACTGCGGTGCCCACTGCATGTGCACGCACAAGGTCGACATTCCGCTCAATGCNATCG] [+] EMBL BX619374 [TTTCGTCATCACCGCTGACCAGCCGGTCGGTGCGTACTGGATCCAGCTGCGAGGACTCGTGCGAGTGCGGCATCAAGCGTGCCCAGCAGCTGGCCATCCTGCGCTATGCTCGCGGCCCCTACCAGCCTGCCTCGCCGCCCCCAACCTACGACGTCGGACTTCCGCAGGGCGTTGTCATGAATCCGCTCGACGCTCAGTGCAACGTCCAGCGGGACGATGCCATCTGTGTGAGCCAGCTGAAGAACGCCAAGGAGATTGACCGGGCGCTGCTGCAGGAGAAGCCGGACGTGAAGATTTTCCTGCCGTTCCGCTTCTACCTCTACCGCCCGGAGGAACTGTTCCAGCCGAACACGTACAACCGTTTCCTGGTCGCCCCGACCGGAGATCATGTCATTTCGCTGATNGACGAAATTTCGTACCTGTCCGCGCCGGCCCCGCTGCTGTCCCAGTACGACGACATTAACCCGGAGCAGTNNTGCAACGGTGACAACCGGCCCGCCGACTGCGGTGCCCACTGCATGTGCACGCACAAGGTCGACATTCCGCTCAATGCNATCG] consensusID : consensus_6836#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 412 fasta sequence [CCGCTAACTCGCACCTGTACGACTTCGATCTGACCACGCACATCATGCTGGTGAGTGACTGGCTGCACGAGGACGCCGCTGAGCGCTACCCGGGCCGTCTGGCGGTGAACACCGGGCAGGATCCCGAATCGCTGCTGATCAACGGCAAGGGCCAGTTCCGTGACCCGAACACCGGCTTCATGACCAACACGCCGCTGGAGATCTTCACCATTACGCCTGGGCGCCGCTATCGGTTCCGCATGATCAACGCGTTCGCTTCCGTCTGCCCGGCCCAGGTTACGATTGAGGGACATGCGCTGACGGTGATTGCGACCGACGGCGAGCCGGTGCATCCGGTGCAAGTCAACACCATCATCTCGTTCTCAGGCGAACGTTACGATTTCGTCATCACCGCTGACCAGCCGGGTCGGTG] [+] EMBL BM615684 [CCGCTAACTCGCACCTGTACGACTTCGATCTGACCACGCACATCATGCTGGTGAGTGACTGGCTGCACGAGGACGCCGCTGAGCGCTACCCGGGCCGTCTGGCGGTGAACACCGGGCAGGATCCCGAATCGCTGCTGATCAACGGCAAGGGCCAGTTCCGTGACCCGAACACCGGCTTCATGACCAACACGCCGCTGGAGATCTTCACCATTACGCCTGGGCGCCGCTATCGGTTCCGCATGATCAACGCGTTCGCTTCCGTCTGCCCGGCCCAGGTTACGATTGAGGGACATGCGCTGACGGTGATTGCGACCGACGGCGAGCCGGTGCATCCGGTGCAAGTCAACACCATCATCTCGTTCTCAGGCGAACGTTACGATTTCGTCATCACCGCTGACCAGCCGGGTCGGTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_6836#1 ------------------------------------------------------------ consensus_6836#3 ------------------------------------------------------------ consensus_6836#0 ----AGCAGAATCGGC-ACGAGGTTGTATACACACAAAAAAACCCGTCTCAAATCCCGCA 55 consensus_6836#2 TTTCGTCATCACCGCTGACCAGCCGGTCGGTGCGTACTGGATCCAGCTGCGA-----GGA 55 consensus_6836#1 --CAGAATTCCCCGCAGGTTATTACGCCCGGGCGCCGCTATCGGTTCGCTATGATCAACG 58 consensus_6836#3 ---------------------------------------------CCGCTAACTCGCACC 15 consensus_6836#0 CTCGTTTGTACAAAATCTCCAACACCCTCTGCTCTGTGTGATCGCAAAATGAAATGAACA 115 consensus_6836#2 CTCGTGCGAGTGCGGCATCAAGCGTGCCCAGCAGC---TGGCCATCCTGCGCTATGCTCG 112 * consensus_6836#1 CGTTCGCTATCCGTCTGCCCGGCCAG-GTTACGATCGAGGGACATGC-GCTGACGGTGAT 116 consensus_6836#3 TGTACGACTTCGATCTGACCACGCAC-ATCATGCTGGTGAGTGACTG-GCTGCACGAGGA 73 consensus_6836#0 AACAAAAAAACAAACAAATTGCGCACCATCAACAACGTCGTCGTCGTCGTCGTCGTCGGG 175 consensus_6836#2 CGGCCCCTACCAGCCTGCCTCGCCGCCCCCAAC--CTACGACGTCGG-ACTTCCGCAGGG 169 * * * * * consensus_6836#1 TGCGACCGACGGCGTAGCCGGTGCATACCGGTGCAAGTCAACACCATCATCTCGTTCTCA 176 consensus_6836#3 CGCCGCTGAGCGC-TACCCGGGCCGTCTGGCGGTGAACACCGGGCAGGATCCCGAA-TCG 131 consensus_6836#0 CAG-GTCATGAATCCGCTCGA--CGCTCAGTG--CAACGTCCAGCGGGACGATGCCATCT 230 consensus_6836#2 CGTTGTCATGAATCCGCTCGA--CGCTCAGTG--CAACGTCCAGCGGGACGATGCCATCT 225 ** * * * * * * ** consensus_6836#1 GTGCGAACGTTACGAT-TTCGTCATCACCGTGACCAGCCTGGTCGGTGCGTACTGGATCC 235 consensus_6836#3 CTGCTGATCAACGGCA-AGGGCCAGTTCCGTGACCCGAACACCGGCTTCATGACCAACAC 190 consensus_6836#0 GTGTGAGCCAGCTGAAGAACGCCAAGGAGATTGACCGGGCGCT-GCTGCAGGAGAAGCCG 289 consensus_6836#2 GTGTGAGCCAGCTGAAGAACGCCAAGGAGATTGACCGGGCGCT-GCTGCAGGAGAAGCCG 284 ** * * ** * * * * * * consensus_6836#1 AGCTGCGNAGGACTCGGCGAGATGCGGCAT-CAAGCGTG--CCCAGCAGCTGGNCATCCT 292 consensus_6836#3 GCCGCTGGAGATCTTCAC---------CAT-TACGCCTG--GGC-GCCGCTATCGGTTCC 237 consensus_6836#0 GACG-TGAAGATTTTCCTGCCGTTCCGCTTCTACCTCTACCGCCCGGAGGAACTGTTCCA 348 consensus_6836#2 GACG-TGAAGATTTTCCTGCCGTTCCGCTTCTACCTCTACCGCCCGGAGGAACTGTTCCA 343 * * ** * * * * * * * * * * consensus_6836#1 GCGCTATGCTCGCGGCACCTACCAGCCTGCTCGCCGACCC-CAACTACGAC-AGTCGGAC 350 consensus_6836#3 GCATGATCAACGCGTTCGCTTCC-GTCTGC---CCGGCCC-AGGTTACGAT-TGAGGGAC 291 consensus_6836#0 GCCGAACACGTACAACCGTTTCCTGGTCGCC--CCGACCGGAGATCATGTCATTTCGCTG 406 consensus_6836#2 GCCGAACACGTACAACCGTTTCCTGGTCGCC--CCGACCGGAGATCATGTCATTTCGCTG 401 ** * * * ** * ** *** ** * * * consensus_6836#1 TTCCGNAGGGCGTTGTCATGAATCCGCTCGAGCTCAGTGCAAC--GTCCAGCTGGGACGA 408 consensus_6836#3 ATGCGCTGACGGTGATTGCGACCGACGGCGAGC-CGGTGCATCCGGTGCAAGTCA-ACAC 349 consensus_6836#0 ATTGACGAAATTTCGTACCTGTCCGCGCCGGCCCCGCTGCTGTCCCAGTACGACG-ACAT 465 consensus_6836#2 ATNGACGAAATTTCGTACCTGTCCGCGCCGGCCCCGCTGCTGTCCCAGTACGACG-ACAT 460 * * * ** * * *** * ** consensus_6836#1 TGCCATCT-GTGTNGAGGCCAGCTGAACGAACGCCAAGGC-AGNATTG-ACCGGGCGCTG 465 consensus_6836#3 CATCATCTCGTTCTCAGGCGAACGTTACGATTTCGTCATC-ACCGCTG-ACCAGCCGGGT 407 consensus_6836#0 TAACCCGGAGCAGTTCTGCAACGGTGACAACCGGCCGGCCGACTGCGGTGCCAACTGCAT 525 consensus_6836#2 TAACCCGGAGCAGTNNTGCAACGGTGACAACCGGCCCGCCGACTGCGGTGCCCACTGCAT 520 * * ** * ** * * * * ** * consensus_6836#1 CTGCACGGCACGNAACGCCGGCACG-TGAAGATTTCTCCTGCCGTTACGCTTCTACCCTA 524 consensus_6836#3 CGGTG------------------------------------------------------- 412 consensus_6836#0 GTGCACGCACAAGGTCGACATTCCGCTCAATGCCATCGTGGAGGTCGTTCTTGTCGACGA 585 consensus_6836#2 GTGCACGCACAAGGTCGACATTCCGCTCAATGCNATCG---------------------- 558 * consensus_6836#1 CACGCCCGGCAGGAANCTGTNCCAGCCGAAACACGGTACAACCCGCTCATCCATGNCATC 584 consensus_6836#3 ------------------------------------------------------------ consensus_6836#0 AGTCCAACAACCGAATCTGAGCCATCCGTTCCATCTGCACGGTTACGCGTACAACGTGAT 645 consensus_6836#2 ------------------------------------------------------------ consensus_6836#1 CGCCCCCGACCGGCAGCATCACTGCTCAATAAACAGCCTAGATATGACCGAACACTCNCC 644 consensus_6836#3 ------------------------------------------------------------ consensus_6836#0 CGGTATTGGCCGCTCACCGGACTCGAACGTCAAGAAGATTAACCTGAAGCACGCGCTCGA 705 consensus_6836#2 ------------------------------------------------------------ consensus_6836#1 CG---------------------------------------------------------- 646 consensus_6836#3 ------------------------------------------------------------ consensus_6836#0 CCTCGATCGGCGCGGTCTGCTCCACCGGCAGTACAACCTGGCCCCGCTCAAGGACACCAT 765 consensus_6836#2 ------------------------------------------------------------ consensus_6836#1 ------------------------------------------------------------ consensus_6836#3 ------------------------------------------------------------ consensus_6836#0 TGCCGTCCCGAACAACGGATACGTCGTGCTGCGATTCCGTGCCGACAATCCAGGGATTCT 825 consensus_6836#2 ------------------------------------------------------------ consensus_6836#1 ------------------------------------------- consensus_6836#3 ------------------------------------------- consensus_6836#0 GGCTGNTCCACTGTCACTTCCTGTTCCACATCGTGATAGGAAT 868 consensus_6836#2 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Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||