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Anopheles gambiae
cluster # 6838 cluster # 6838       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6838#0 length = 1484 sequences # 4  
consensus_6838#1 length = 1196 sequences # 1  
consensus_6838#2 length = 639 sequences # 1  

consensusID : consensus_6838#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1484
fasta sequence
                              [CCGCACACGCGCTGCATTTGAGCCACCACGATGGTGTTTGTATGCGCTTCGATGAGTGTTAGGAGTGTTTTTGGTTGTTGTGTCGTTGTGGCGATTCTGAATGGCTTAAACATGGAAAGGTGTGCGTGTGTGTGTGTATGTGTGTGTGTATGTGTAAAGCTTTCGTCCAGCGAGTTGTAATTATTCCGTGTTCATCCTTTACGTTTAGGGCCAAAACTAAGGCCGCGGGGTGTAGCGCGGCAGCACAGCGCATTACGTTGTAGCGCACATATGTTTGTACAATTTGTTCTTAAATCGTACACATTCATACAATCAATGTGTGTACGCATGTGGACGTATGTGTATTGCCGTGTCGTCTATAAGTAATAATTATCTATATATGTATCACTGTTCCGCACTGGGCGGCGCAGGTCGCGTGCAACAAGTACTCAAGCAACTGTTAGGTTACGTTTAAGTGTTAAGAAGATGCAGGATTCTAAATGCTCATGCCAAACAGAAGGTCTGAAGTCCGTACTCCGAGACGGGCGAGCGTTTCGCAGGATTCGTGAAACGTCATGTGGTATGTGTTTGTTCTTCGTTGTATGATTATTATTAACTTGGCTTGATGGAACAGTCTGGTTTGAATTTGGGTTTTGTTGCGGCAGCACTACATCTTTGGTTCGCTATTGTGGGGTCTTTCTTAATGAAAGATTCTGCAACAAAAACAACAAATAGCACAAAAACGGAGCAATGTCGTCGTTGTTTGTCATCAGCCTGAGAGCTTCAACTATTACAAAAACACAAAAAAGTAGTAGATCTATTACACATACACGAAACTCGTTCGTCGCACGAGTAAATTCTAATCAAAGAAACACACTTAAAAGGAAACAAAAAGAGTAAACTTAAAGTTAAAAAAACGAAAATAAAGTCATGCTAAGGNATAGATGCAAAAAAAAAATGTATGGATGTGTGGGAATATATATATGTGTGTGCATGCGTGTAAATGTATGTTTGTGNGGGCTATGTAGCTCCCCGCTCCTGCTAAGCCGACAAGGAAAGGCGACAAAAAAGCTTCCAACAAACATAAACATGTAGGCAACGTGATAAGACGCAAAACACGCAAACGTATATAGAAG-AAAAAAAACGAAATAATTTCGAACCACGCGCCCAAACGGAGGAGAACCAAACGGAAATAAGCTTTTGCGAATAAAATTTGCAAAAGCAAAAAGCCTAAGAACGTATAGAGCAGTCAAACATGCACGAATAGACAGGCGTTAAAGCTGGTTAAGGAGAGCAGCAGAACTTGTTGTTGTTTTTTTTTTTTTGGAAAAATGCACAATATGCGCAGAAAAACACACACTCACACGGATGAAGAGATATTTTGAGTATTTATTTATTGACTAAGTGTCTAGCCGTAGATGCGCATTTTGCTGGGCTGTACGATTGCCACAGCTATGAAAAGGGGCGGGCGACCCTTGGGTCATCCGGCACAAAACGGAGAGAAA]

[+] EMBL BM603414             [CCGCACACGCGCTGCATTTGAGCCACCACGATGGTGTTTGTATGCGCTTCGATGAGTGTTAGGAGTGTTTTTGGTTGTTGTGTCGTTGTGGCGATTCTGAATGGCTTAAACATGGAAAGGTGTGCGTGTGTGTGTGTATGTGTGTGTGTATGTGTAAAGCTTTCGTCCAGCGAGTTGTAATTATTCCGTGTTCATCCTTTACGTTTAGGGCCAAAACTAAGGCCGCGGGGTGTAGCGCGGCAGCACAGCGCATTACGTTGTAGCGCACATATGTTTGTACAATTTGTTCTTAAATCGTACACATTCATACAATCAATGTGTGTACGCATGTGGACGTATGTGTATTGCCGTGTCGTCTATAAGTAATAATTATCTATATATGTATCACTGTTCCGCACTGGGCGGCGCAGGTCGCGTGCAACAAGTACTCAAGCAACTGTTAGGTTACGTTTAAGTGTTAAGAAGATGCAGGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX626714             [                                                                                                                                                                                                                                                                                                                                  TACGCATGTGGACGTATGTGTATTGCCGTGTCGTCTATAAGTAATAATTATCTATATATGTATCACCGTTCCGCACTGGGCGGCGCAGGTCGCGTGCAACAAGTACTCAAGCAACTGTTAGGTTACGTTTAAGTGNTAAGAAGATGCAGGATTCTAAATGCTCATGCCAAACAGAAGGTCTGAAGTCCGTACTCCGAGACGGGCGAGCGTTTCGCAGGATTCGTGAAACGTCATGTGGTATGTGTTTGTTCTTCGTTGTATGATTATTATTAACTTGGCTTGATGGAACAGTCTGGTTTGAATTTGGGTTTTGTTGCGGCAGCACTACATCTTTGGTTCGCTATTGTGGGGTCTTTCTTAATGAAAGATTCTGCAACAAAAACAACAAATAGCACAAAAACGGAGCAATGTCGTCGTTGTTTGTCATCAGCCTGAGAGCTTCAACTATTACAAAAACACAAAAAAGTAGTAGATCTATTACACATACACGAAACTCGTTCGTCGCACGAGTAAATTCTAATCAAAGAAACACACTTAAAAGGAAACAAAAAGAGTAAACTTAAAGTTAAAAAAACGAAAATAAAGTCATGCTAAGGNATAGATGCAAAAAAAAAATGTATGGATGTGTGGGAATATATATATGTGTGTGCATGCGTGTAAATGTATGTTTGTGNGGGCTATGTAGCTCCCCGCTCCTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX625426             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCCTGAGAGCTTCAACTATTACAAAAACACAAAAAAGTAGTAGATCTATTACACATACACGAAACTCGTTCGTCGCACGAGTAAATTCTAATCAAAGAAACACACTTAAAAGGAAACAAAAAGAGTAAACTTAAAGTTAAAAAAACGAAAATAAAGTCATGCTAAGGTATAGATGCAAAAAAAAAATGTATGGATGTGTGGGAATATATATATGTGTGTGCATGCGTGTAAATGTATGTTTGTGTGGGCTATGTAGCTCCCCGCTCCTGCTAAGCCGACAAGGAAAGGCGACAAAAAAGCTTCCAACAAACATAAACATGTAGGCAACGTGATAAGACGCAAAACACGCAAACGTATATAGAAG AAAAAAAACGAAATAATTTCGAACCACGCGCCCAAACGGAGGAGAACCAAACGGAAATAAGCTTTTGCGAATAAAATTTGCAAAAGCAAAAAGCCTAAGAACGTATAGAGCAGTCAAACATGCACGAATAGACAGGCGTTAAAGCTGGTTAAGGAGAGCAGCAGAACTTGTTGTTGTTTTTTTTTTTTTGGAAAAATGCACAATATG                                                                                                                                                                  ]
[+] EMBL BX609662             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTCCCCGCTCCTGCTAAGCCGACAAGGAAAGGCGACAAAAAAGCTTCCAACAAACATAAACATGTAGGCAACGTGATAAGACGCAAAACACGCAAACGTATATAGAAGAAAAAAAAACGAAATAATTTCGAACCACGCGCCCAAACGGAGGAGAACCAAACGGAAATAAGCTTTTGCGAATAAAATTTGCAAAAGCAAAAAGCCTAAGAACGTATAGAGCAGTCAAACATGCACGAATAGACAGGCGTTAAAGCTGGTTAAGGAGAGCAGCAGAACTTGTTGTT TTTTTTTTTTTTTGGAAAAATGCACAATATGCGCAGAAAAACACACACTCACACGGATGAAGAGATATTTTGAGTATTTATTTATTGACTAAGTGTCTAGCCGTAGATGCGCATTTTGCTGGGCTGTACGATTGCCACAGCTATGAAAAGGGGCGGGCGACCCTTGGGTCATCCGGCACAAAACGGAGAGAAA]


>consensus_6838#0 CCGCACACGCGCTGCATTTGAGCCACCACGATGGTGTTTGTATGCGCTTCGATGAGTGTT AGGAGTGTTTTTGGTTGTTGTGTCGTTGTGGCGATTCTGAATGGCTTAAACATGGAAAGG TGTGCGTGTGTGTGTGTATGTGTGTGTGTATGTGTAAAGCTTTCGTCCAGCGAGTTGTAA TTATTCCGTGTTCATCCTTTACGTTTAGGGCCAAAACTAAGGCCGCGGGGTGTAGCGCGG CAGCACAGCGCATTACGTTGTAGCGCACATATGTTTGTACAATTTGTTCTTAAATCGTAC ACATTCATACAATCAATGTGTGTACGCATGTGGACGTATGTGTATTGCCGTGTCGTCTAT AAGTAATAATTATCTATATATGTATCACTGTTCCGCACTGGGCGGCGCAGGTCGCGTGCA ACAAGTACTCAAGCAACTGTTAGGTTACGTTTAAGTGTTAAGAAGATGCAGGATTCTAAA TGCTCATGCCAAACAGAAGGTCTGAAGTCCGTACTCCGAGACGGGCGAGCGTTTCGCAGG ATTCGTGAAACGTCATGTGGTATGTGTTTGTTCTTCGTTGTATGATTATTATTAACTTGG CTTGATGGAACAGTCTGGTTTGAATTTGGGTTTTGTTGCGGCAGCACTACATCTTTGGTT CGCTATTGTGGGGTCTTTCTTAATGAAAGATTCTGCAACAAAAACAACAAATAGCACAAA AACGGAGCAATGTCGTCGTTGTTTGTCATCAGCCTGAGAGCTTCAACTATTACAAAAACA CAAAAAAGTAGTAGATCTATTACACATACACGAAACTCGTTCGTCGCACGAGTAAATTCT AATCAAAGAAACACACTTAAAAGGAAACAAAAAGAGTAAACTTAAAGTTAAAAAAACGAA AATAAAGTCATGCTAAGGNATAGATGCAAAAAAAAAATGTATGGATGTGTGGGAATATAT ATATGTGTGTGCATGCGTGTAAATGTATGTTTGTGNGGGCTATGTAGCTCCCCGCTCCTG CTAAGCCGACAAGGAAAGGCGACAAAAAAGCTTCCAACAAACATAAACATGTAGGCAACG TGATAAGACGCAAAACACGCAAACGTATATAGAAGAAAAAAAACGAAATAATTTCGAACC ACGCGCCCAAACGGAGGAGAACCAAACGGAAATAAGCTTTTGCGAATAAAATTTGCAAAA GCAAAAAGCCTAAGAACGTATAGAGCAGTCAAACATGCACGAATAGACAGGCGTTAAAGC TGGTTAAGGAGAGCAGCAGAACTTGTTGTTGTTTTTTTTTTTTTGGAAAAATGCACAATA TGCGCAGAAAAACACACACTCACACGGATGAAGAGATATTTTGAGTATTTATTTATTGAC TAAGTGTCTAGCCGTAGATGCGCATTTTGCTGGGCTGTACGATTGCCACAGCTATGAAAA GGGGCGGGCGACCCTTGGGTCATCCGGCACAAAACGGAGAGAAA



consensusID : consensus_6838#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1196
fasta sequence
                              [GGCAGAATCCCCCCGCAGGTTATATATATAAATATGTAGGCTACACATAAGCCAGCGGTGAAAAAAACAAAAATCGACGTTCGACGTCAAACTCCGTTCCAATCTACAATGCCGCGAGCACACGCGCTGCATTTGAGCCACCACGATGGTGTATTGTATGCGCTTCGATAGAGTGTTAGGAGTAGTTAATATAGGTATGTATAGTAGTACGTAAGTAGGGAGATATCTGAATAGGGCTTAAAACATGGGAAAAGGTAGTAGACGTAGTAGTAGTAGTAGTATAGTAGTNGTAGTAGTATTGTAGTAAAAGCTTTNNACGTTACCAGCGAAGATTGTAAAATATAATATACCGGTTGGTTANATACAATACCTATATAGCGGTATATCACGGCGACCAAAACAAACCTTAAAGAGGCACGGACGGGGGGATAGTTAAGACGGTCGGNCCAAGCAACCAGACGCNATTAACGTTANNAGTCAGACCGCCACCAATTATTGCTCNCTACGGTCAACAACACTATAAAGGTANACCTATCAAAAATACCGAGAAACCAACAATTTTCTCATTAACNCAAACTACCCAAACATNCGGTCGGTCTGGTTAAAACACTGNCACATTAGGTCTGGGGCAACCGGTATAACTTGGNTTAGGTAAATTATAAGGCCCNAGGTCTGGGTACAGATACCTTCAATCAAAACGGTTACAAACTACACCACTACTNACATTACCTTAATAACATTCCATTCGTTNCATACAAACATAAGGNTACTACCCCCGCCAAACACTATGNGGAGNGACACNGGACCAGACCCAAANANGATACCACGCAGCGTNGACACAACGCACAAAAAAGAGTACAACCATACCACAAAGACCACACAACCCANAGGCGTAACAAAGGGCAAACNAACCAGNGANCAAAACAGGCGTGGGCTACAACAGCAAAAAACGAATAGGGCCAAGCGAGAAACTCANCCATTNAACACAAANCNGGGCCTACCNACATNGGCNCCACAGCANCCAAAGCAACAAAGGGCGAACANCNAGGAACAAGGACCNCGGCGCGAAACCCTNCCCNCGCACAGCANACCGCGACCGCCGGAAGACCGGCACACACCAGCCCCACGCNNGCAACANACACNCGACACGGANACACACCAGCAGCCCACCAGGCTGNCGCACAACANGGCNGGAN]

[+] EMBL AL694957             [GGCAGAATCCCCCCGCAGGTTATATATATAAATATGTAGGCTACACATAAGCCAGCGGTGAAAAAAACAAAAATCGACGTTCGACGTCAAACTCCGTTCCAATCTACAATGCCGCGAGCACACGCGCTGCATTTGAGCCACCACGATGGTGTATTGTATGCGCTTCGATAGAGTGTTAGGAGTAGTTAATATAGGTATGTATAGTAGTACGTAAGTAGGGAGATATCTGAATAGGGCTTAAAACATGGGAAAAGGTAGTAGACGTAGTAGTAGTAGTAGTATAGTAGTNGTAGTAGTATTGTAGTAAAAGCTTTNNACGTTACCAGCGAAGATTGTAAAATATAATATACCGGTTGGTTANATACAATACCTATATAGCGGTATATCACGGCGACCAAAACAAACCTTAAAGAGGCACGGACGGGGGGATAGTTAAGACGGTCGGNCCAAGCAACCAGACGCNATTAACGTTANNAGTCAGACCGCCACCAATTATTGCTCNCTACGGTCAACAACACTATAAAGGTANACCTATCAAAAATACCGAGAAACCAACAATTTTCTCATTAACNCAAACTACCCAAACATNCGGTCGGTCTGGTTAAAACACTGNCACATTAGGTCTGGGGCAACCGGTATAACTTGGNTTAGGTAAATTATAAGGCCCNAGGTCTGGGTACAGATACCTTCAATCAAAACGGTTACAAACTACACCACTACTNACATTACCTTAATAACATTCCATTCGTTNCATACAAACATAAGGNTACTACCCCCGCCAAACACTATGNGGAGNGACACNGGACCAGACCCAAANANGATACCACGCAGCGTNGACACAACGCACAAAAAAGAGTACAACCATACCACAAAGACCACACAACCCANAGGCGTAACAAAGGGCAAACNAACCAGNGANCAAAACAGGCGTGGGCTACAACAGCAAAAAACGAATAGGGCCAAGCGAGAAACTCANCCATTNAACACAAANCNGGGCCTACCNACATNGGCNCCACAGCANCCAAAGCAACAAAGGGCGAACANCNAGGAACAAGGACCNCGGCGCGAAACCCTNCCCNCGCACAGCANACCGCGACCGCCGGAAGACCGGCACACACCAGCCCCACGCNNGCAACANACACNCGACACGGANACACACCAGCAGCCCACCAGGCTGNCGCACAACANGGCNGGAN]


>consensus_6838#1 GGCAGAATCCCCCCGCAGGTTATATATATAAATATGTAGGCTACACATAAGCCAGCGGTG AAAAAAACAAAAATCGACGTTCGACGTCAAACTCCGTTCCAATCTACAATGCCGCGAGCA CACGCGCTGCATTTGAGCCACCACGATGGTGTATTGTATGCGCTTCGATAGAGTGTTAGG AGTAGTTAATATAGGTATGTATAGTAGTACGTAAGTAGGGAGATATCTGAATAGGGCTTA AAACATGGGAAAAGGTAGTAGACGTAGTAGTAGTAGTAGTATAGTAGTNGTAGTAGTATT GTAGTAAAAGCTTTNNACGTTACCAGCGAAGATTGTAAAATATAATATACCGGTTGGTTA NATACAATACCTATATAGCGGTATATCACGGCGACCAAAACAAACCTTAAAGAGGCACGG ACGGGGGGATAGTTAAGACGGTCGGNCCAAGCAACCAGACGCNATTAACGTTANNAGTCA GACCGCCACCAATTATTGCTCNCTACGGTCAACAACACTATAAAGGTANACCTATCAAAA ATACCGAGAAACCAACAATTTTCTCATTAACNCAAACTACCCAAACATNCGGTCGGTCTG GTTAAAACACTGNCACATTAGGTCTGGGGCAACCGGTATAACTTGGNTTAGGTAAATTAT AAGGCCCNAGGTCTGGGTACAGATACCTTCAATCAAAACGGTTACAAACTACACCACTAC TNACATTACCTTAATAACATTCCATTCGTTNCATACAAACATAAGGNTACTACCCCCGCC AAACACTATGNGGAGNGACACNGGACCAGACCCAAANANGATACCACGCAGCGTNGACAC AACGCACAAAAAAGAGTACAACCATACCACAAAGACCACACAACCCANAGGCGTAACAAA GGGCAAACNAACCAGNGANCAAAACAGGCGTGGGCTACAACAGCAAAAAACGAATAGGGC CAAGCGAGAAACTCANCCATTNAACACAAANCNGGGCCTACCNACATNGGCNCCACAGCA NCCAAAGCAACAAAGGGCGAACANCNAGGAACAAGGACCNCGGCGCGAAACCCTNCCCNC GCACAGCANACCGCGACCGCCGGAAGACCGGCACACACCAGCCCCACGCNNGCAACANAC ACNCGACACGGANACACACCAGCAGCCCACCAGGCTGNCGCACAACANGGCNGGAN



consensusID : consensus_6838#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 639
fasta sequence
                              [GCAGAATCCGCACGAGTGGTTTTTGGTTGTTGTGTCGTTGTGGCGATTTTGAATGGCTTAAACATGGAAAGGTGTGCGTGTGTGTGTGTGTGTATGTGTGTATGTGTAAAGCTTTCGTCCAGCGAGTTGTAATTATTCCGTGTTCATCCTTTACGTTTAGGGCCAAAACCAAGGCCGCGGTGTAGCGCGGCAGCACAGCGCATTACGTTGTAGCGCACATATGTTTGCCACAATTTGTTCTTAAATCGTACACATTCATACAATCAATGTGTGTACGCATGTGTACGGTATGTGGTATTGCCGTGTCGTCTATAAGTAATAATTATCTATATATGTATCACTGTTCCGCACTGGGCGGCGCAGTCGCGTGCAACAAGTACTCAAGCAACTGTTAGGTTACGTTTAAGTGTTAACGAAGATGCAGGATTCTAAATGCTCATGCCAAACAGAAGGTCTGAAGTCCGTACTCCGAGACGGGCGAGCGTTTCGCAGGATTCGTGAAACGTCATGTGGTATGTGTTNGTTCTTCGGTGTTAGTATGATTATTACTTGCACTTGGCTTGATGGAACAGTCTGGGTTTGAACTTTNGACGTCATNGTTGCGGCAGACACTACACCTTGGGTTTCGCGTATAGTGGG]

[+] EMBL BX468780             [GCAGAATCCGCACGAGTGGTTTTTGGTTGTTGTGTCGTTGTGGCGATTTTGAATGGCTTAAACATGGAAAGGTGTGCGTGTGTGTGTGTGTGTATGTGTGTATGTGTAAAGCTTTCGTCCAGCGAGTTGTAATTATTCCGTGTTCATCCTTTACGTTTAGGGCCAAAACCAAGGCCGCGGTGTAGCGCGGCAGCACAGCGCATTACGTTGTAGCGCACATATGTTTGCCACAATTTGTTCTTAAATCGTACACATTCATACAATCAATGTGTGTACGCATGTGTACGGTATGTGGTATTGCCGTGTCGTCTATAAGTAATAATTATCTATATATGTATCACTGTTCCGCACTGGGCGGCGCAGTCGCGTGCAACAAGTACTCAAGCAACTGTTAGGTTACGTTTAAGTGTTAACGAAGATGCAGGATTCTAAATGCTCATGCCAAACAGAAGGTCTGAAGTCCGTACTCCGAGACGGGCGAGCGTTTCGCAGGATTCGTGAAACGTCATGTGGTATGTGTTNGTTCTTCGGTGTTAGTATGATTATTACTTGCACTTGGCTTGATGGAACAGTCTGGGTTTGAACTTTNGACGTCATNGTTGCGGCAGACACTACACCTTGGGTTTCGCGTATAGTGGG]


>consensus_6838#2 GCAGAATCCGCACGAGTGGTTTTTGGTTGTTGTGTCGTTGTGGCGATTTTGAATGGCTTA AACATGGAAAGGTGTGCGTGTGTGTGTGTGTGTATGTGTGTATGTGTAAAGCTTTCGTCC AGCGAGTTGTAATTATTCCGTGTTCATCCTTTACGTTTAGGGCCAAAACCAAGGCCGCGG TGTAGCGCGGCAGCACAGCGCATTACGTTGTAGCGCACATATGTTTGCCACAATTTGTTC TTAAATCGTACACATTCATACAATCAATGTGTGTACGCATGTGTACGGTATGTGGTATTG CCGTGTCGTCTATAAGTAATAATTATCTATATATGTATCACTGTTCCGCACTGGGCGGCG CAGTCGCGTGCAACAAGTACTCAAGCAACTGTTAGGTTACGTTTAAGTGTTAACGAAGAT GCAGGATTCTAAATGCTCATGCCAAACAGAAGGTCTGAAGTCCGTACTCCGAGACGGGCG AGCGTTTCGCAGGATTCGTGAAACGTCATGTGGTATGTGTTNGTTCTTCGGTGTTAGTAT GATTATTACTTGCACTTGGCTTGATGGAACAGTCTGGGTTTGAACTTTNGACGTCATNGT TGCGGCAGACACTACACCTTGGGTTTCGCGTATAGTGGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6838#0      CCGCACACGCGCTGCATTTGAGCCACCACGATGGTGTTTGTATGCGCTTCGATGAGTGT- 59
consensus_6838#2      --------------------------------------------------GCAGAATCCG 10
consensus_6838#1      -------------------------------------------------GGCAGAATCCC 11
                                                                        *  ** *   

consensus_6838#0      TAGGAGTG-TTTTTG-GTTGTTGTGTCGTTGTGGCGATTCTGAATGGCTTAAACATGGAA 117
consensus_6838#2      CACGAGTGGTTTTTG-GTTGTTGTGTCGTTGTGGCGATTTTGAATGGCTTAAACATGGAA 69
consensus_6838#1      CCCGCAGGTTATATATATAAATATGTAGGCTACACATAAGCCAGCGG-TGAAAAAAACAA 70
                         *   * * * *   *   * *** *      *       *  ** * *** *   **

consensus_6838#0      AGGTGTGCGTGTGTGTGTGTATGTGTGTGTGTATGTGTAAAGCTTTCGTCCAGCGAGTTG 177
consensus_6838#2      AGGTGTGCGTGTGTGTGTGTGTGTATGTGTGTATGTGTAAAGCTTTCGTCCAGCGAGTTG 129
consensus_6838#1      AAATCGACGTTCG-ACGTCAAACTCCGTTCCAATCTACAATGCCGCGAGCACACGCGCTG 129
                      *  *   ***  *   **     *  **    ** *  ** **      *   ** * **

consensus_6838#0      TAATTATTCCGTGTTCATCCTTTACGTTTAGGGCCAAAACTAAGGCCGCGGGGTG--TAG 235
consensus_6838#2      TAATTATTCCGTGTTCATCCTTTACGTTTAGGGCCAAAACCAAGGCCGCGG--TG--TAG 185
consensus_6838#1      CATTTGAGCCACCACGATGGTGTATTGTATGCGCTTCGATAGAGTGTTAGGAGTAGTTAA 189
                       * **   **      **  * **   *  * **    *   **     **  *   ** 

consensus_6838#0      CGCGGCAGCACAGCGCATTACGTTGTAGCGCACATATGTTTGT-ACAATTTGTTCTTAAA 294
consensus_6838#2      CGCGGCAGCACAGCGCATTACGTTGTAGCGCACATATGTTTGCCACAATTTGTTCTTAAA 245
consensus_6838#1      TATAGGTATGTATAGTAGTACGTA--AGTAGGGAGATATCTGA-ATAGGGC-TTAAAACA 245
                          *      *  * * *****   **     * ** * **  * *     **   * *

consensus_6838#0      TCGTACACATTCATACAATCAATGTGTGTACGCATGTGGACG-TAT-GTG-TATTGCCGT 351
consensus_6838#2      TCGTACACATTCATACAATCAATGTGTGTACGCATGTGTACGGTAT-GTGGTATTGCCGT 304
consensus_6838#1      TGGGAAAAGGTAGTAGACGTAGTAGTAGTAGTAGTATAGTAGTNGTAGTAGTATTGTAGT 305
                      * * * *   *  ** *   * *    ***    * *    *   * **  *****  **

consensus_6838#0      GTCGTCTATAAGTAATAATTATCTA---TATATGTATCACTGTTCCGCACTGGGCGGCGC 408
consensus_6838#2      GTCGTCTATAAGTAATAATTATCTA---TATATGTATCACTGTTCCGCACTGGGCGGCGC 361
consensus_6838#1      AAAAGCTTTNNACGTTACCAGCGAAGATTGTAAAATATAATATACCGGTTGGTTANATAC 365
                           ** *      **       *   * **      * * * ***    *       *

consensus_6838#0      AGGTCGCGTGCAACAA-GTACTCAAGCAACTGTTAGGTTACGTTTAAGTGTTAA-GAAGA 466
consensus_6838#2      AG-TCGCGTGCAACAA-GTACTCAAGCAACTGTTAGGTTACGTTTAAGTGTTAACGAAGA 419
consensus_6838#1      AATACCTATATAGCGGTATATCACGGCGACCAA-AACAAACCTTAAAGAGGCACGGACGG 424
                      *   *   *  * *    **     ** **    *    ** ** *** *  *  ** * 

consensus_6838#0      TGCAGGATTCTAAATGCTCATGCCAAACAGAAGGTC-----TGAAGTCCGTACTCCGAG- 520
consensus_6838#2      TGCAGGATTCTAAATGCTCATGCCAAACAGAAGGTC-----TGAAGTCCGTACTCCGAG- 473
consensus_6838#1      GGGGATAGTTAAGACGGTCGGNCCAAGCAACCAGACGCNATTAACGTTANNAGTCAGACC 484
                       *    * *  * * * **   **** **    * *     * * **    * ** **  

consensus_6838#0      ---ACGGGCGAGCGTTTCGCAGGATTCGTGAAAC-GTCATGTGGTATGTGTTTGTTCT-T 575
consensus_6838#2      ---ACGGGCGAGCGTTTCGCAGGATTCGTGAAAC-GTCATGTGGTATGTGTTNGTTCT-T 528
consensus_6838#1      GCCACCAATTATTGCTCNCTACGGTCAACAACACTATAAAGGTANACCTATCAAAAATAC 544
                         **     *  * *    * * *     * **  * * *    *  * *      *  

consensus_6838#0      CGTTGT----ATGATTATTATTA--ACTTGGCTTGATGGAACA--------GTCTGG-TT 620
consensus_6838#2      CGGTGTTAGTATGATTATTACTTGCACTTGGCTTGATGGAACA--------GTCTGGGTT 580
consensus_6838#1      CGAGAAACCAACAATTTTCTCATTAACNCAAACTACCCAAACATNCGGTCGGTCTGGTTA 604
                      **        *  *** *       **      *     ****        ****** * 

consensus_6838#0      TGAATTTGGGTT----TTGTTGCGGCAG-CACTACATCTTTGGTT-CGC-TATTGTGGGG 673
consensus_6838#2      TGAACTTTNGACGTCATNGTTGCGGCAGACACTACACCTTGGGTTTCGCGTATAGTGGG- 639
consensus_6838#1      AAACACTGNCACATTAGGTCTGGGGCAACCGGTATAACTTGGNTTAGGTAAATTATAAGG 664
                        *   *             ** ****  *  ** * *** * **  *   **  *  * 

consensus_6838#0      TCTTTCTTAATGAAAGATTCTGCAACAAAAACAACAAATAGCACAAAAACGGAGCAATGT 733
consensus_6838#2      ------------------------------------------------------------
consensus_6838#1      CCC---------NAGGTCTGGGTACAGATACCTTCAATCAAAACGGTTACAAACTACACC 715
                                                                                  

consensus_6838#0      CGTCGTTGTTTGTCATCAGCCTGAGAGCTTCAACTATTACAAAAACACAAAAAAGTAGTA 793
consensus_6838#2      ------------------------------------------------------------
consensus_6838#1      ACTACTNACATTACCTTAAT---AACATTCCATTCGTTNCATACAAACATAAGGNTACTA 772
                                                                                  

consensus_6838#0      GATCTATTACACA-TACACGAAACTCGTTCGTCGCACGAGTAAATTCTAATCAAAGAAAC 852
consensus_6838#2      ------------------------------------------------------------
consensus_6838#1      CCCCCGCCAAACACTATGNGGAGNGACACNGGACCAGACCCAAANANGATACCACGCAGC 832
                                                                                  

consensus_6838#0      ACACTTAAAAGGAAACAAAAAGAGTAAACTTAAAGTTAAAAAAACGAAAA---TAAAGTC 909
consensus_6838#2      ------------------------------------------------------------
consensus_6838#1      GTNGACACAACGCACAAAAAAGAGTACAACCATACCACAAAGACCACACAACCCANAGGC 892
                                                                                  

consensus_6838#0      ATGCTAAGGNATAGATGCAAAAAAAAAATGTATGGATGTGTGGGAATATATATATGTGTG 969
consensus_6838#2      ------------------------------------------------------------
consensus_6838#1      GTAACAAAGGGCAAACNAACCAGNGANCAAAACAGGCGTGGGCTACAACAGCAAAAAACG 952
                                                                                  

consensus_6838#0      TGCATGCGTGTAAATGTATGTTTGT-GNGGGCTATGTAGCTCCCCGCTCCTGCTAAGCCG 1028
consensus_6838#2      ------------------------------------------------------------
consensus_6838#1      AATAGGGCCAAGCGAGAAACTCANCCATTNAACACAAANCNGGGCCTACCNACATNGGCN 1012
                                                                                  

consensus_6838#0      ACAAGGAAAGGCGACAAAAAAGCTTCCAACAAACATAAACATGTAGGCAACGTGATAAGA 1088
consensus_6838#2      ------------------------------------------------------------
consensus_6838#1      CCACAGCANCCAAAGCAACAAAGGGCGAACANCNAGGAACAAG--GACCNCGGCGCGAAA 1070
                                                                                  

consensus_6838#0      CGCAAAACACGCA-AACGTATATAGAAGAAAAAAAACGAAATAATTTCGAACCACGCGCC 1147
consensus_6838#2      ------------------------------------------------------------
consensus_6838#1      CCCTNCCCNCGCACAGCANACCGCGACCGCCGGAAGACCGGCACACACCAGCCCCACGCN 1130
                                                                                  

consensus_6838#0      CAAACGGAGGAGAACCAAACGGAAATAAGCTTTTGCGAATAAAATTTGCAAAAGCAAAAA 1207
consensus_6838#2      ------------------------------------------------------------
consensus_6838#1      NGCA-ACANACACNCGACACGGANACACACCAGCAGCCCACCAGGCTGNCGCACAACANG 1189
                                                                                  

consensus_6838#0      GCCTAAGAACGTATAGAGCAGTCAAACATGCACGAATAGACAGGCGTTAAAGCTGGTTAA 1267
consensus_6838#2      ------------------------------------------------------------
consensus_6838#1      GCNGGAN----------------------------------------------------- 1196
                                                                                  

consensus_6838#0      GGAGAGCAGCAGAACTTGTTGTTGTTTTTTTTTTTTTGGAAAAATGCACAATATGCGCAG 1327
consensus_6838#2      ------------------------------------------------------------
consensus_6838#1      ------------------------------------------------------------
                                                                                  

consensus_6838#0      AAAAACACACACTCACACGGATGAAGAGATATTTTGAGTATTTATTTATTGACTAAGTGT 1387
consensus_6838#2      ------------------------------------------------------------
consensus_6838#1      ------------------------------------------------------------
                                                                                  

consensus_6838#0      CTAGCCGTAGATGCGCATTTTGCTGGGCTGTACGATTGCCACAGCTATGAAAAGGGGCGG 1447
consensus_6838#2      ------------------------------------------------------------
consensus_6838#1      ------------------------------------------------------------
                                                                                  

consensus_6838#0      GCGACCCTTGGGTCATCCGGCACAAAACGGAGAGAAA 1484
consensus_6838#2      -------------------------------------
consensus_6838#1      -------------------------------------
                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)