These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_686#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 465 fasta sequence [ACGTCGCAAGTATTCGACCGATGAACCGCTGGCGGTGAGCACACCGCCCTCCAAATGGCCCGGCGTGACAAACCTGCGAGCGCTGTTGGCACGAGAGAAGGACGAAGATACACCGCGGCTGAACGTGCTGCTATGCGAGTCGTTTGTGGCCGCTTATATGGCGCTGTTCGTGTACGCTCTGACCACGTGCGATTGTCACATCCTGTACCGTCTAGCCGGGCAGAACTTCTGCGACAGCTCCTGGTCGACACTGTTCGGCGGTGGCGTAAAGAAGCTGTTGCGCAAGGCTACCTCGCACGCGCAAACGGCCCAGACCGTTCAGGCGCAGATGCAGCAGGAAAGCATGGAGGGTTCTGCCGAGGCTGGAGCTAGTAGTGCGGAAGGTAGCGTCTGGGGTGCGGTAACATCGCTTACGAAACATCGGGTGAAGCTAAACATGAAACTGCTGGGACCGTTCGCTGGACC] [+] EMBL AGA280689 [ACGTCGCAAGTATTCGACCGATGAACCGCTGGCGGTGAGCACACCGCCCTCCAAATGGCCCGGCGTGACAAACCTGCGAGCGCTGTTGGCACGAGAGAAGGACGAAGATACACCGCGGCTGAACGTGCTGCTATGCGAGTCGTTTGTGGCCGCTTATATGGCGCTGTTCGTGTACGCTCTGACCACGTGCGATTGTCACATCCTGTACCGTCTAGCCGGGCAGAACTTCTGCGACAGCTCCTGGTCGACACTGTTCGGCGGTGGCGTAAAGAAGCTGTTGCGCAAGGCTACCTCGCACGCGCAAACGGCCCAGACCGTTCAGGCGCAGATGCAGCAGGAAAGCATGGAGGGTTCTGCCGAGGCTGGAGCTAGTAGTGCGGAAGGTAGCGTCTGGGGTGCGGTAACATCGCTTACGAAACATCGGGTGAAGCTAAACATGAAACTGCTGGGACCGTTCGCTGGACC] consensusID : consensus_686#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 369 fasta sequence [CCGCCCACGCGTCCGGCCGAGGCTGGAGCTAGTAGTGCGGAAGGTAGCGTCTGGGGTGCGGTAACATCGCTTACGAAACATCGGGTGAAGCTAAACATGAAACTGCTGGGACCGTTCGCTGGACCCCAGGGTGCATCGAACATGAAGGAGGACAAACCCACGTACCGGGAGCAGTTCGTGCCGCCGGAAATGTCTATGGTGTCGTACTTCCTTACGAAACCTATTCCCAAGGGACTGGGGGCGGACGAAGAGGAGTATGATTCGGCCGACTCGGCCGTATCGGATCTCGACGACGAAGACGAGGATGAGGATGTGTTCAACGATCCGCTAAACAACGACCCCAAAGCATCGCAAGTGTCGGCCGCCGTC] [+] EMBL BM593892 [CCGCCCACGCGTCCGGCCGAGGCTGGAGCTAGTAGTGCGGAAGGTAGCGTCTGGGGTGCGGTAACATCGCTTACGAAACATCGGGTGAAGCTAAACATGAAACTGCTGGGACCGTTCGCTGGACCCCAGGGTGCATCGAACATGAAGGAGGACAAACCCACGTACCGGGAGCAGTTCGTGCCGCCGGAAATGTCTATGGTGTCGTACTTCCTTACGAAACCTATTCCCAAGGGACTGGGGGCGGACGAAGAGGAGTATGATTCGGCCGACTCGGCCGTATCGGATCTCGACGACGAAGACGAGGATGAGGATGTGTTCAACGATCCGCTAAACAACGACCCCAAAGCATCGCAAGTGTCGGCCGCCGTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_686#0 ACGTCGCAAGTATTCGACCGATGA-ACCGCTGGCGGTGAGCACACCGCCCTCCAAATGGC 59 consensus_686#1 -CCGCCCACGCGTCCGGCCGAGGCTGGAGCTAGTAGTGCGGAAGGTAGCGTCTGG----- 54 * * ** * * ** **** * *** * *** * * * ** consensus_686#0 CCGGCGTGACAAACCTGCGAGCGCTGTTGGCACGAGAGAAGGACGAAGATACACCGCGGC 119 consensus_686#1 --GGTGCGGTAAC------ATCGCTTACGAAACATCGGGTGAAGCTAAACATGAAACTGC 106 ** * * ** * **** * ** * * * * * * * ** consensus_686#0 TGAACGTGCTGCTATGCGAGTCGTTTGTGGCCGCTTATATGGCGCTGTTCGTGTACGCTC 179 consensus_686#1 TGGG---ACCGTTCGCTGGACCCCAGGGTGCATCGAACATGAAGGAGGACA--AACCCAC 161 ** * * * * * * ** * * *** * * * ** * * consensus_686#0 TGACCACGTGCGATTGTCACATCCTGTACCGTCTAGCCGGGCAGAACTTCTGCGACAGCT 239 consensus_686#1 GTACCGGGAGCAGTTCGTGCCGCCGGAAATGTCTA-TGGTGTCGTACTTCCTT-ACGAAA 219 *** * ** ** * ** * * ***** * * * ***** ** consensus_686#0 CCTGGTCGACACTGTTCGGCGGTGGCGTAAAGAAGCTGTTGCGCAAGGCTACCTCGCACG 299 consensus_686#1 CCTATTCCCAAGGGACTGGGGGCGGACGAAGAGGAGTATGATTC--GGCCGACTCGGCCG 277 *** ** * * ** ** ** ** * * * *** **** ** consensus_686#0 CGCAAACGGCCCAGACCGTTCAGGCGCAGATGCAGCAGGAAAGCATGGAGGGTTCTGCCG 359 consensus_686#1 TATCG--GATCTCGACGACGAAGACGAGGATG-----AGGATGTGTTCAACGATCCGCTA 330 * * *** ** ** **** * * * * * * ** ** consensus_686#0 AGGCTGGAGCTAGTAGTGCGGAAGGTAGCGTCTGGGGTGCGGTAACATCGCTTACGAAAC 419 consensus_686#1 AACAACGACCCCAAAGCATCGCAAGTGTCGGCCGCCGTC--------------------- 369 * ** * ** * * ** ** * * ** consensus_686#0 ATCGGGTGAAGCTAAACATGAAACTGCTGGGACCGTTCGCTGGACC 465 consensus_686#1 ---------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||