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Anopheles gambiae
cluster # 6878 cluster # 6878       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6878#0 length = 1032 sequences # 1  
consensus_6878#1 length = 695 sequences # 1  
consensus_6878#2 length = 684 sequences # 1  
consensus_6878#3 length = 683 sequences # 1  
consensus_6878#4 length = 678 sequences # 2  

consensusID : consensus_6878#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1032
fasta sequence
                              [AGAATNGCCCGACGGTTAAGTATACTGCAATACGCACCATCGGTTAGATTATACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGCGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTGTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTAGCTGGTTCCTTGAATTACGTTGAGTGTGATATATACTGTGGAAGACGACATCAAAATATGCATACGGCATGGCATTGAACAAACACAATAACGGTGGAGGTAGATATTGCTAAGTNTAAACAANGCAGGCATTAATAAACGAAAAATGTCCTGGCTTAAACCAGNGCACGCAATTACATACACAGAGACCCTTATACNAAGACCCATGGAANACCGAATATCCATTTGGGTCATNTCCTTCTGTCGCACTCGGGGAAGCTGTAAAAATCAATGCAAAGCACCGTTGNATGTAACAAGGGCCACCATCCATACACACGTNCAANACCAGCCTAATACGCACCATTACACATGTCCATCNAAGCCGCTACCCAGGCAACGCCGACATATGAACTGGAANTGTACCCCCANACATCAANAGNANCGCAGTCACCTGCACATCNAACCCCGCACANTTCNTCANTCNANCAACCACACNAAACACCCAATNGCCAACATAAATCCTCAAACCCCACGGCGAGCCCNTGCTAACCAGCTCCCNCCGCAGCTAATTACAAGATCAACCCCACGGCCCCCTAAAACNCTCACACNGGGNTNGCAATCATNAACAATCNCAAACGCAAAAAACTACCCTCCCAAGCCGGGGANTCACACTGCCNCACCTCAGGTCACAANTTACCACTTNCCCCGAAAACACTNANCCAGCCCTTCAANAGANTNGGTGGCAGACAAGCAAGCACAACAATNTGCACGTCCAACCAACCCNNCCACCCNATGGNCCACCACACCCCACACCCANTACACCTCAAC]

[+] EMBL AL695596             [AGAATNGCCCGACGGTTAAGTATACTGCAATACGCACCATCGGTTAGATTATACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGCGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTGTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTAGCTGGTTCCTTGAATTACGTTGAGTGTGATATATACTGTGGAAGACGACATCAAAATATGCATACGGCATGGCATTGAACAAACACAATAACGGTGGAGGTAGATATTGCTAAGTNTAAACAANGCAGGCATTAATAAACGAAAAATGTCCTGGCTTAAACCAGNGCACGCAATTACATACACAGAGACCCTTATACNAAGACCCATGGAANACCGAATATCCATTTGGGTCATNTCCTTCTGTCGCACTCGGGGAAGCTGTAAAAATCAATGCAAAGCACCGTTGNATGTAACAAGGGCCACCATCCATACACACGTNCAANACCAGCCTAATACGCACCATTACACATGTCCATCNAAGCCGCTACCCAGGCAACGCCGACATATGAACTGGAANTGTACCCCCANACATCAANAGNANCGCAGTCACCTGCACATCNAACCCCGCACANTTCNTCANTCNANCAACCACACNAAACACCCAATNGCCAACATAAATCCTCAAACCCCACGGCGAGCCCNTGCTAACCAGCTCCCNCCGCAGCTAATTACAAGATCAACCCCACGGCCCCCTAAAACNCTCACACNGGGNTNGCAATCATNAACAATCNCAAACGCAAAAAACTACCCTCCCAAGCCGGGGANTCACACTGCCNCACCTCAGGTCACAANTTACCACTTNCCCCGAAAACACTNANCCAGCCCTTCAANAGANTNGGTGGCAGACAAGCAAGCACAACAATNTGCACGTCCAACCAACCCNNCCACCCNATGGNCCACCACACCCCACACCCANTACACCTCAAC]


>consensus_6878#0 AGAATNGCCCGACGGTTAAGTATACTGCAATACGCACCATCGGTTAGATTATACATTGCC GACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGCGCCAGTGGAGCAATT GGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTGTGTGCGCTGTCCAGA CGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTAGCTGGTTCCTTGAAT TACGTTGAGTGTGATATATACTGTGGAAGACGACATCAAAATATGCATACGGCATGGCAT TGAACAAACACAATAACGGTGGAGGTAGATATTGCTAAGTNTAAACAANGCAGGCATTAA TAAACGAAAAATGTCCTGGCTTAAACCAGNGCACGCAATTACATACACAGAGACCCTTAT ACNAAGACCCATGGAANACCGAATATCCATTTGGGTCATNTCCTTCTGTCGCACTCGGGG AAGCTGTAAAAATCAATGCAAAGCACCGTTGNATGTAACAAGGGCCACCATCCATACACA CGTNCAANACCAGCCTAATACGCACCATTACACATGTCCATCNAAGCCGCTACCCAGGCA ACGCCGACATATGAACTGGAANTGTACCCCCANACATCAANAGNANCGCAGTCACCTGCA CATCNAACCCCGCACANTTCNTCANTCNANCAACCACACNAAACACCCAATNGCCAACAT AAATCCTCAAACCCCACGGCGAGCCCNTGCTAACCAGCTCCCNCCGCAGCTAATTACAAG ATCAACCCCACGGCCCCCTAAAACNCTCACACNGGGNTNGCAATCATNAACAATCNCAAA CGCAAAAAACTACCCTCCCAAGCCGGGGANTCACACTGCCNCACCTCAGGTCACAANTTA CCACTTNCCCCGAAAACACTNANCCAGCCCTTCAANAGANTNGGTGGCAGACAAGCAAGC ACAACAATNTGCACGTCCAACCAACCCNNCCACCCNATGGNCCACCACACCCCACACCCA NTACACCTCAAC



consensusID : consensus_6878#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 695
fasta sequence
                              [CCGCCAAAACGACAATTGTCAACAAAGCATCCATAGCATACTGCGATATTTAGCACACCGAAGTACAACTTTAAAAAATGGCGGCTAATGGTAGCAATGGTAATAATGATAACAACGAAAGTATACCTGCAATACCGCCACCATCGGTTAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGCGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTGTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTAGCTGGTTCCTTGAATTACGTTGAGTGTGATATTACTGTGGAAGACGACATCAAATATGCATTCGGATGGATTGAAAACACATACGGTGGAGTAGATATGCTAGTTAACAACGCAGGCATTATAACGAAATGTTTGCTAACAGAGAAGAATAATACAAGAGACCTATACAAGACAATGGAAACGAATATCATTGGTTTATCTTTGTGCACTCGGGAAGCTGTTAAATCAATGAAAGCACGTGATGTTAAGGGCCACATCATAAACGTAAACAGCATATTTGGACATAAAGTACATCAAGCCGTTCCAGGAACGCGACCATTGAATGGAATGTACCCAGCATCAAAGTACGCAGTCACTGCAATTACC]

[+] EMBL BM606118             [CCGCCAAAACGACAATTGTCAACAAAGCATCCATAGCATACTGCGATATTTAGCACACCGAAGTACAACTTTAAAAAATGGCGGCTAATGGTAGCAATGGTAATAATGATAACAACGAAAGTATACCTGCAATACCGCCACCATCGGTTAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGCGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTGTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTAGCTGGTTCCTTGAATTACGTTGAGTGTGATATTACTGTGGAAGACGACATCAAATATGCATTCGGATGGATTGAAAACACATACGGTGGAGTAGATATGCTAGTTAACAACGCAGGCATTATAACGAAATGTTTGCTAACAGAGAAGAATAATACAAGAGACCTATACAAGACAATGGAAACGAATATCATTGGTTTATCTTTGTGCACTCGGGAAGCTGTTAAATCAATGAAAGCACGTGATGTTAAGGGCCACATCATAAACGTAAACAGCATATTTGGACATAAAGTACATCAAGCCGTTCCAGGAACGCGACCATTGAATGGAATGTACCCAGCATCAAAGTACGCAGTCACTGCAATTACC]


>consensus_6878#1 CCGCCAAAACGACAATTGTCAACAAAGCATCCATAGCATACTGCGATATTTAGCACACCG AAGTACAACTTTAAAAAATGGCGGCTAATGGTAGCAATGGTAATAATGATAACAACGAAA GTATACCTGCAATACCGCCACCATCGGTTAGATTAGACATTGCCGACCGCATGAAACGCT GGCATGGAAAGGTTGCAGTTGTGACAGGCGCCAGTGGAGCAATTGGTGGTGCTATTGCAA TTGAACTAGTCAAATCAGGAATGATCGTGTGTGCGCTGTCCAGACGACGTGACAAAGTAG AAAAGTTACGCGTTAGCCTCTTTGACGTAGCTGGTTCCTTGAATTACGTTGAGTGTGATA TTACTGTGGAAGACGACATCAAATATGCATTCGGATGGATTGAAAACACATACGGTGGAG TAGATATGCTAGTTAACAACGCAGGCATTATAACGAAATGTTTGCTAACAGAGAAGAATA ATACAAGAGACCTATACAAGACAATGGAAACGAATATCATTGGTTTATCTTTGTGCACTC GGGAAGCTGTTAAATCAATGAAAGCACGTGATGTTAAGGGCCACATCATAAACGTAAACA GCATATTTGGACATAAAGTACATCAAGCCGTTCCAGGAACGCGACCATTGAATGGAATGT ACCCAGCATCAAAGTACGCAGTCACTGCAATTACC



consensusID : consensus_6878#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 684
fasta sequence
                              [CCGCGAAACTCATCAGAGAGATCGTGTTCATTTTCTGTACAACTTTAAAAAATGGCGGCTAATGGTAGCAATGGTAATAATGATAACAACGAAAGTATACCTGCAATACCGCCACCATCGGTTAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGCGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTGTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTAGCTGGTTCCTTGAATTACGTTGAGTGTGATATTACTGTGGAAGACGACATCAAATATGCATTCGGATGGATTGAAAACACATACGGTGGAGTAGATATGCTAGTTAACAACGCAGGCATTATAACGAAATGTTTGCTAACAGAGAAGAATAATACAAGAGACCTATACAAGACAATGGAAACGAATATCATTGGTTTATCTTTGTGCACTCGGGAAGCTGTTAAATCAATGAAAGCACGTGATGTTAAGGGCCACATCATAAACGTAAACAGCATATTTGGACATAAAGTACATCAAGCCGTTCCAGGAACGCGACCATTGAATGGAATGTACCCAGCATCAAAGTACGCAGTCACTGCAATTACCGAGTGTATTAGACAG]

[+] EMBL BM633595             [CCGCGAAACTCATCAGAGAGATCGTGTTCATTTTCTGTACAACTTTAAAAAATGGCGGCTAATGGTAGCAATGGTAATAATGATAACAACGAAAGTATACCTGCAATACCGCCACCATCGGTTAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGCGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTGTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTAGCTGGTTCCTTGAATTACGTTGAGTGTGATATTACTGTGGAAGACGACATCAAATATGCATTCGGATGGATTGAAAACACATACGGTGGAGTAGATATGCTAGTTAACAACGCAGGCATTATAACGAAATGTTTGCTAACAGAGAAGAATAATACAAGAGACCTATACAAGACAATGGAAACGAATATCATTGGTTTATCTTTGTGCACTCGGGAAGCTGTTAAATCAATGAAAGCACGTGATGTTAAGGGCCACATCATAAACGTAAACAGCATATTTGGACATAAAGTACATCAAGCCGTTCCAGGAACGCGACCATTGAATGGAATGTACCCAGCATCAAAGTACGCAGTCACTGCAATTACCGAGTGTATTAGACAG]


>consensus_6878#2 CCGCGAAACTCATCAGAGAGATCGTGTTCATTTTCTGTACAACTTTAAAAAATGGCGGCT AATGGTAGCAATGGTAATAATGATAACAACGAAAGTATACCTGCAATACCGCCACCATCG GTTAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACA GGCGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATC GTGTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGAC GTAGCTGGTTCCTTGAATTACGTTGAGTGTGATATTACTGTGGAAGACGACATCAAATAT GCATTCGGATGGATTGAAAACACATACGGTGGAGTAGATATGCTAGTTAACAACGCAGGC ATTATAACGAAATGTTTGCTAACAGAGAAGAATAATACAAGAGACCTATACAAGACAATG GAAACGAATATCATTGGTTTATCTTTGTGCACTCGGGAAGCTGTTAAATCAATGAAAGCA CGTGATGTTAAGGGCCACATCATAAACGTAAACAGCATATTTGGACATAAAGTACATCAA GCCGTTCCAGGAACGCGACCATTGAATGGAATGTACCCAGCATCAAAGTACGCAGTCACT GCAATTACCGAGTGTATTAGACAG



consensusID : consensus_6878#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 683
fasta sequence
                              [CCGCTGCTTTCATCGAAACTCATCAGAGAGATCGTGTTCATTTTCTGGTAAAATCTGTTGCTTCACATAAGTGCGAAAAGCTGTGCGTGGTTATCAGCAGTTTTGAATGCATAAATATTTACAAAAAGTGTTTAATAATTTCATTTTATTGTGACATTATAAGATAAAACTAAGTTAAGAGATAAGATAAACTAAGATAAAACAAACTAAGAGTACAACTTTAAAAAATGGCGGCTAATGGTAGCAATGGTAATAATGATAACAACGAAAGTATACCTGCAATACCGCCACCATCGGTTAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGCGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTGTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTAGCTGGTTCCTTGAATTACGTTGAGTGTGATATTACTGTGGAAGACGACATCAAATATGCATTCGGATGGATTGAAAACACATACGGTGGAGTAGATATGCTAGTTAACAACGCAGGCATTATAACGAAATGTTTGCTAACAGAGAAGAATAATACAAGAGACCTATACCAGACAATGGAAACGAATATCATTGGTTTATCTTTG]

[+] EMBL BM620376             [CCGCTGCTTTCATCGAAACTCATCAGAGAGATCGTGTTCATTTTCTGGTAAAATCTGTTGCTTCACATAAGTGCGAAAAGCTGTGCGTGGTTATCAGCAGTTTTGAATGCATAAATATTTACAAAAAGTGTTTAATAATTTCATTTTATTGTGACATTATAAGATAAAACTAAGTTAAGAGATAAGATAAACTAAGATAAAACAAACTAAGAGTACAACTTTAAAAAATGGCGGCTAATGGTAGCAATGGTAATAATGATAACAACGAAAGTATACCTGCAATACCGCCACCATCGGTTAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGCGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTGTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTAGCTGGTTCCTTGAATTACGTTGAGTGTGATATTACTGTGGAAGACGACATCAAATATGCATTCGGATGGATTGAAAACACATACGGTGGAGTAGATATGCTAGTTAACAACGCAGGCATTATAACGAAATGTTTGCTAACAGAGAAGAATAATACAAGAGACCTATACCAGACAATGGAAACGAATATCATTGGTTTATCTTTG]


>consensus_6878#3 CCGCTGCTTTCATCGAAACTCATCAGAGAGATCGTGTTCATTTTCTGGTAAAATCTGTTG CTTCACATAAGTGCGAAAAGCTGTGCGTGGTTATCAGCAGTTTTGAATGCATAAATATTT ACAAAAAGTGTTTAATAATTTCATTTTATTGTGACATTATAAGATAAAACTAAGTTAAGA GATAAGATAAACTAAGATAAAACAAACTAAGAGTACAACTTTAAAAAATGGCGGCTAATG GTAGCAATGGTAATAATGATAACAACGAAAGTATACCTGCAATACCGCCACCATCGGTTA GATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGCG CCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTGT GTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTAG CTGGTTCCTTGAATTACGTTGAGTGTGATATTACTGTGGAAGACGACATCAAATATGCAT TCGGATGGATTGAAAACACATACGGTGGAGTAGATATGCTAGTTAACAACGCAGGCATTA TAACGAAATGTTTGCTAACAGAGAAGAATAATACAAGAGACCTATACCAGACAATGGAAA CGAATATCATTGGTTTATCTTTG



consensusID : consensus_6878#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 678
fasta sequence
                              [TCCATAGCATACTGCGATATTTAGCACACCGAAGTACAACTTTAAAAAATGGCGGCTAATGGTAGCAATGGTAATAATGATAACAACGAAAGTATACCTGCAATACCGCCACCATCGGTTAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGCGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTGTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTAGCTGGTTCCTTGAATTACGTTGAGTGTGATATTACTGTGGAAGACGACATCAAATATGCATTCGGATGGATTGAAAACACATACGGTGGAGTAGATATGCTAGTTAACAACGCAGGCATTATAACGAAATGTTTGCTAACAGAGAAGAATAATACAAGAAACGCTCTAAGAGATAGATAACAACAGTCAATGAATCAGTTGTGCAGAATACTATTTCACATCTTTGTATATCAATTTTTTTAAAACGTCTTATTATGAAAAAACCATAACCCATTATGAAAAAACCATTAACTATAAAGATATTTCGAAAAACAAGTTTTTGTGCTAACTAACGCATTTAAAAATCGTTCAAACATTTAAATAACATATTCAAGAAAT]

[+] EMBL BX625320             [TCCATAGCATACTGCGATATTTAGCACACCGAAGTACAACTTTAAAAAATGGCGGCTAATGGTAGCAATGGTAATAATGATAACAACGAAAGTATACCTGCAATACCGCCACCATCGGTTAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGCGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTGTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTAGCTGGTTCCTTGAATTACGTTGAGTGTGATATTACTGTGGAAGACGACATCAAATATGCATTCGGATGGATTGAAAACACATACGGTGGAGTAGATATGCTAGTTAACAACGCAGGCATTATAACGAAATGTTTGCTAACAGAGAAGAATAATACAAGAAACGCTCTAAGAGATAGATAACAACAGTCAATGAATCAGTTGTGCAGAATACTATTTCACATCTTTGTATATCAATTTTTTTAAAACGTCTTATTATGAAAAAACCATAACCCATTATGAAAAAACCATTAACTATAAAG                                                                               ]
[+] EMBL BX625319             [  CATAGCATACTGCGATATTTAGCACACCGAAGTACAACTTTAAAAAATGGCGGCTAATGGTAGCAATGGTAATAATGATAACAACGAAAGTATACCTGCAATACCGCCACCATCGGTTAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGCGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTGTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTAGCTGGTTCCTTGAATTACGTTGAGTGTGATATTACTGTGGAAGACGACATCAAATATGCATTCGGATGGATTGAAAACACATACGGTGGAGTAGATATGCTAGTTAACAACGCAGGCATTATAACGAAATGTTTGCTAACAGAGAAGAATAATACAAGAAACGCTCTAAGAGATAGATAACAACAGTCAATGAATCAGTTGTGCAGAATACTATTTCACATCTTTGTATATCAATTTTTTTAAAACGTCTTATTATGAAAAAACCATAA CCATTATG AAAAACCA TAACTATAAAGATATTTCGAAAAACAAGTTTTTGTGCTAACTAACGCATTTAAAAATCGTTCAAACATTTAAATAACATATTCAAGAAAT]


>consensus_6878#4 TCCATAGCATACTGCGATATTTAGCACACCGAAGTACAACTTTAAAAAATGGCGGCTAAT GGTAGCAATGGTAATAATGATAACAACGAAAGTATACCTGCAATACCGCCACCATCGGTT AGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGGC GCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGTG TGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGTA GCTGGTTCCTTGAATTACGTTGAGTGTGATATTACTGTGGAAGACGACATCAAATATGCA TTCGGATGGATTGAAAACACATACGGTGGAGTAGATATGCTAGTTAACAACGCAGGCATT ATAACGAAATGTTTGCTAACAGAGAAGAATAATACAAGAAACGCTCTAAGAGATAGATAA CAACAGTCAATGAATCAGTTGTGCAGAATACTATTTCACATCTTTGTATATCAATTTTTT TAAAACGTCTTATTATGAAAAAACCATAACCCATTATGAAAAAACCATTAACTATAAAGA TATTTCGAAAAACAAGTTTTTGTGCTAACTAACGCATTTAAAAATCGTTCAAACATTTAA ATAACATATTCAAGAAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6878#0      ------------------------------------------------------------
consensus_6878#2      ------------------------------------------------------------
consensus_6878#1      ------------------------------------------------------------
consensus_6878#3      CCGCTGCTTTCATCGAAACTCATCAGAGAGATCGTGTTCATTTTCTGGTAAAATCTGTTG 60
consensus_6878#4      ------------------------------------------------------------
                                                                                  

consensus_6878#0      ------------------------------------------------------------
consensus_6878#2      ------------------------------------------------------------
consensus_6878#1      ------------------------------------------------------------
consensus_6878#3      CTTCACATAAGTGCGAAAAGCTGTGCGTGGTTATCAGCAGTTTTGAATGCATAAATATTT 120
consensus_6878#4      ------------------------------------------------------------
                                                                                  

consensus_6878#0      ------------------------------------------------------------
consensus_6878#2      -------------------------------------------------------CCGCG 5
consensus_6878#1      -----------------------------CCGCCAAAACGACAATTGTCAACAAAGCATC 31
consensus_6878#3      ACAAAAAGTGTTTAATAATTTCATTTTATTGTGACATTATAAGATAAAACTAAGTTAAGA 180
consensus_6878#4      ----------------------------------------------------------TC 2
                                                                                  

consensus_6878#0      ------------------------------------------------------------
consensus_6878#2      AAACTCATCAGAGAGATCGTGTTCATTTTC-TGTACAACTTTAAAAAATGGCGGCTAATG 64
consensus_6878#1      CATAGCATACTGCGATATTTAGCACACCGA-AGTACAACTTTAAAAAATGGCGGCTAATG 90
consensus_6878#3      GATAAGATAAACTAAGATAAAACAAACTAAGAGTACAACTTTAAAAAATGGCGGCTAATG 240
consensus_6878#4      CATAGCATACTGCGATATTTAGCACACCGA-AGTACAACTTTAAAAAATGGCGGCTAATG 61
                                                                                  

consensus_6878#0      ------------AGAATNGCC-CGACGGTTAAGTATAC-TGCAATACG--CACCATCGGT 44
consensus_6878#2      GTAGCAATGGTAATAATGATAACAACGA--AAGTATACCTGCAATACCGCCACCATCGGT 122
consensus_6878#1      GTAGCAATGGTAATAATGATAACAACGA--AAGTATACCTGCAATACCGCCACCATCGGT 148
consensus_6878#3      GTAGCAATGGTAATAATGATAACAACGA--AAGTATACCTGCAATACCGCCACCATCGGT 298
consensus_6878#4      GTAGCAATGGTAATAATGATAACAACGA--AAGTATACCTGCAATACCGCCACCATCGGT 119
                                  * ***     * ***   ******** ********   **********

consensus_6878#0      TAGATTATACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGG 104
consensus_6878#2      TAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGG 182
consensus_6878#1      TAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGG 208
consensus_6878#3      TAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGG 358
consensus_6878#4      TAGATTAGACATTGCCGACCGCATGAAACGCTGGCATGGAAAGGTTGCAGTTGTGACAGG 179
                      ******* ****************************************************

consensus_6878#0      CGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGT 164
consensus_6878#2      CGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGT 242
consensus_6878#1      CGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGT 268
consensus_6878#3      CGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGT 418
consensus_6878#4      CGCCAGTGGAGCAATTGGTGGTGCTATTGCAATTGAACTAGTCAAATCAGGAATGATCGT 239
                      ************************************************************

consensus_6878#0      GTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGT 224
consensus_6878#2      GTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGT 302
consensus_6878#1      GTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGT 328
consensus_6878#3      GTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGT 478
consensus_6878#4      GTGTGCGCTGTCCAGACGACGTGACAAAGTAGAAAAGTTACGCGTTAGCCTCTTTGACGT 299
                      ************************************************************

consensus_6878#0      AGCTGGTTCCTTGAATTACGTTGAGTGTGATATATACTGTGGAAGACGACATCAAAATAT 284
consensus_6878#2      AGCTGGTTCCTTGAATTACGTTGAGTGTGATAT-TACTGTGGAAGACGACATCAAA-TAT 360
consensus_6878#1      AGCTGGTTCCTTGAATTACGTTGAGTGTGATAT-TACTGTGGAAGACGACATCAAA-TAT 386
consensus_6878#3      AGCTGGTTCCTTGAATTACGTTGAGTGTGATAT-TACTGTGGAAGACGACATCAAA-TAT 536
consensus_6878#4      AGCTGGTTCCTTGAATTACGTTGAGTGTGATAT-TACTGTGGAAGACGACATCAAA-TAT 357
                      ********************************* ********************** ***

consensus_6878#0      GCATACGGCATGGCATTGAACAAACACAATAACGGTGGAGGTAGATATTGCTAAGTNTAA 344
consensus_6878#2      GCATTCGG-ATGG-ATTGAAAACACATA----CGGTGGAG-TAGATAT-GCTA---GTTA 409
consensus_6878#1      GCATTCGG-ATGG-ATTGAAAACACATA----CGGTGGAG-TAGATAT-GCTA---GTTA 435
consensus_6878#3      GCATTCGG-ATGG-ATTGAAAACACATA----CGGTGGAG-TAGATAT-GCTA---GTTA 585
consensus_6878#4      GCATTCGG-ATGG-ATTGAAAACACATA----CGGTGGAG-TAGATAT-GCTA---GTTA 406
                      **** *** **** ****** * *** *    ******** ******* ****    * *

consensus_6878#0      ACAANGCAGGCATTAATAAACGAAAAATGTCCTGGCTTAAACCAGNGCACGCAATTACAT 404
consensus_6878#2      ACAACGCAGGCATTAT--AACGAAATGTTTGCTAAC--AGAGAAGAATA---------AT 456
consensus_6878#1      ACAACGCAGGCATTAT--AACGAAATGTTTGCTAAC--AGAGAAGAATA---------AT 482
consensus_6878#3      ACAACGCAGGCATTAT--AACGAAATGTTTGCTAAC--AGAGAAGAATA---------AT 632
consensus_6878#4      ACAACGCAGGCATTAT--AACGAAATGTTTGCTAAC--AGAGAAGAATA---------AT 453
                      **** **********   *******  * * **  *  * *  **   *         **

consensus_6878#0      ACACAGAGACCCTTATACNAAGACCCATGGAANACCGAATATCCATTTGGGTCATNTCCT 464
consensus_6878#2      ACA-AGAGACC--TATACAAGA--CAATGGAAA--CGAATATC--ATTGGTTTATCTTTG 507
consensus_6878#1      ACA-AGAGACC--TATACAAGA--CAATGGAAA--CGAATATC--ATTGGTTTATCTTTG 533
consensus_6878#3      ACA-AGAGAC--CTATACCAGA--CAATGGAAA--CGAATATC--ATTGGTTTATCTTTG 683
consensus_6878#4      ACA-AGAAACG-CTCTAAGAGA--TA--GATAA--CAACAGTC--AATGAATCAGTTGTG 503
                      *** *** **   * **  *        *  *   * *   **    **  * *  *   

consensus_6878#0      TCTGTCGCACTCGGGGAAGCTGTAAAAATCAATGCAAAGCACCGTTGNATGTAACAAGGG 524
consensus_6878#2      T-----GCACTCGGG-AAGCTGTTAAA-TCAATG-AAAGCAC-GT--GATGT--TAAGGG 554
consensus_6878#1      T-----GCACTCGGG-AAGCTGTTAAA-TCAATG-AAAGCAC-GT--GATGT--TAAGGG 580
consensus_6878#3      ------------------------------------------------------------
consensus_6878#4      CAGAATACTATTTCACATCTTTGTATATCAATTTTTTTAAAACGTCTTATTATGAAAAAA 563
                                                                                  

consensus_6878#0      CCACCATCCATACACACGTNCAANACCAGCCTAATACGCACCATTACACATGTCCATCNA 584
consensus_6878#2      CCAC-ATC---ATAAACGTA-AACAGCATATTTGGACATA---------AAGTACATCAA 600
consensus_6878#1      CCAC-ATC---ATAAACGTA-AACAGCATATTTGGACATA---------AAGTACATCAA 626
consensus_6878#3      ------------------------------------------------------------
consensus_6878#4      CCATAACCCA-TTATGAAAAAACCATTAACTATAAAGATA-----------TTTCGAAAA 611
                                                                                  

consensus_6878#0      AGCCGCTACCCAGGCAACGCCGACATATGAACTGGAANTGTACCCCCANACATCAANAGN 644
consensus_6878#2      -GCCGTT--CCAGG-AACGCGACCAT-TGAAT--GGAATGTACCC---AGCATCAAA--G 648
consensus_6878#1      -GCCGTT--CCAGG-AACGCGACCAT-TGAAT--GGAATGTACCC---AGCATCAAA--G 674
consensus_6878#3      ------------------------------------------------------------
consensus_6878#4      ACAAGTTTTTGTGCTAACTAACGCATTTAAAAATCGTTCAAACATTTAAATAACATATTC 671
                                                                                  

consensus_6878#0      ANCGCAGTCACCTGCACATCNAACCCCGCACANTTCNTCANTCNANCAACCACACNAAAC 704
consensus_6878#2      TACGCAGTCAC-TGCA-ATTA----CCG---AGTGTATTAGACAG--------------- 684
consensus_6878#1      TACGCAGTCAC-TGCA-ATTA----CC--------------------------------- 695
consensus_6878#3      ------------------------------------------------------------
consensus_6878#4      AAGAAAT----------------------------------------------------- 678
                                                                                  

consensus_6878#0      ACCCAATNGCCAACATAAATCCTCAAACCCCACGGCGAGCCCNTGCTAACCAGCTCCCNC 764
consensus_6878#2      ------------------------------------------------------------
consensus_6878#1      ------------------------------------------------------------
consensus_6878#3      ------------------------------------------------------------
consensus_6878#4      ------------------------------------------------------------
                                                                                  

consensus_6878#0      CGCAGCTAATTACAAGATCAACCCCACGGCCCCCTAAAACNCTCACACNGGGNTNGCAAT 824
consensus_6878#2      ------------------------------------------------------------
consensus_6878#1      ------------------------------------------------------------
consensus_6878#3      ------------------------------------------------------------
consensus_6878#4      ------------------------------------------------------------
                                                                                  

consensus_6878#0      CATNAACAATCNCAAACGCAAAAAACTACCCTCCCAAGCCGGGGANTCACACTGCCNCAC 884
consensus_6878#2      ------------------------------------------------------------
consensus_6878#1      ------------------------------------------------------------
consensus_6878#3      ------------------------------------------------------------
consensus_6878#4      ------------------------------------------------------------
                                                                                  

consensus_6878#0      CTCAGGTCACAANTTACCACTTNCCCCGAAAACACTNANCCAGCCCTTCAANAGANTNGG 944
consensus_6878#2      ------------------------------------------------------------
consensus_6878#1      ------------------------------------------------------------
consensus_6878#3      ------------------------------------------------------------
consensus_6878#4      ------------------------------------------------------------
                                                                                  

consensus_6878#0      TGGCAGACAAGCAAGCACAACAATNTGCACGTCCAACCAACCCNNCCACCCNATGGNCCA 1004
consensus_6878#2      ------------------------------------------------------------
consensus_6878#1      ------------------------------------------------------------
consensus_6878#3      ------------------------------------------------------------
consensus_6878#4      ------------------------------------------------------------
                                                                                  

consensus_6878#0      CCACACCCCACACCCANTACACCTCAAC 1032
consensus_6878#2      ----------------------------
consensus_6878#1      ----------------------------
consensus_6878#3      ----------------------------
consensus_6878#4      ----------------------------
                                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)