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Anopheles gambiae
cluster # 6944 cluster # 6944       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6944#0 length = 1286 sequences # 2  
consensus_6944#1 length = 686 sequences # 1  
consensus_6944#2 length = 680 sequences # 1  
consensus_6944#3 length = 584 sequences # 1  
consensus_6944#4 length = 571 sequences # 1  

consensusID : consensus_6944#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1286
fasta sequence
                              [GTGCCGAAGTGCAACCGGTTGCCAAACGAGAGCAGCGAACACGGCAACGGCAACAACAACTCGATCTGTCTCACGCTCGCGACCAGCAGTTACGGCGGCGAAGACATTGACCAACAGCAGCAGCAGCGGCCTACAAAGATTGGAGTTGCAGCGAACCACACTGCTGCAGCAACAGTAGCAGCAGCAGCAGTACCACCAACCAGTCGCAAAGGTGTACCCATTCCAGCATCGACGAGGCACGGCCAGCTCAATCCGGACGCTGGCCGATGGGAGCGTGAGCGCAACAACGACCCCGAGCTGCCCACAACGTCCCGTACCGCTGTGCCGCTTAATCCTGGCCGACGCGTCACACGCCTGCAAAGGCGCCAGGTGGAACAGCAAGAGGACCAGAAACAACCGTTCATCCGGGACGATGCCGATGGCCATCTGATCTACCAGATCGGTGATATCCTCCATAACAGATATAAAATACTTGCCACCCTCGGCGAGGGTACGTTTGGACGCGTCGTCAAGGTGAAGGACTTGGAGCGCAACCACGTCATGGCGCTGAAGATCATCAAGAACGTGGAGAAGTATCGTGACGCGGCCGAGCTGGAAATTGGTGCGCTGGAAAAGATCATGCAGCTCGATCCCAACCTGGAGCACTTGTGCGTGAAAATGCTAGACTGGTTCGACTACCACGGCCATACGTGTATCGCTTTCGAGATGCTTGGGCTGAGTGTTTTCGACTTCCTGAAAGACAACAACTACGAGCCATATCCGATCGAGCACGTACGGNACATCTTCCTACCAGCTGTGCTACGCCGTCAAGTTCCTGCACGAGAGCCGCCTCACGCACACGGACCTGAAGCCGGAAAACATACTGTTCGTCGACTCGGAGTACACCACCACGACGGTCCCACGCAAGAACCGCGAGGTGCGCCGCGTCAACTGTACCGATATTCGACTGATCGATTTTGGCAGCGCCACGTTTGACGACGAGCACCACAGCACCATCGTCTCCACCCGGCACTATCGCGCACCGGAAGTGATCCTCGAGCTCGGCTGGTCGCAGCCCTGTGACGTTTGGTCGATCGGCTGCATCATGTTCGAGCTGTACCAGGGCGTAACGCTCTTCCCAACGCACGACAATCGCGAACATCTGGCCATGATGGGAACGGATCCTGGGCACCATCCCTTACCGCATGGCAAGGCAAACACGGTCCAAGTACTTCCGCTATGGCAAGCTGGACTGGGGACGAGAAGTCTTCCACCGGGCGGTACGTGCGGGACAACTGCAAGCCGCT]

[+] EMBL BX621424             [GTGCCGAAGTGCAACCGGTTGCCAAACGAGAGCAGCGAACACGGCAACGGCAACAACAACTCGATCTGTCTCACGCTCGCGACCAGCAGTTACGGCGGCGAAGACATTGACCAACAGCAGCAGCAGCGGCCTACAAAGATTGGAGTTGCAGCGAACCACACTGCTGCAGCAACAGTAGCAGCAGCAGCAGTACCACCAACCAGTCGCAAAGGTGTACCCATTCCAGCATCGACGAGGCACGGCCAGCTCAATCCGGACGCTGGCCGATGGGAGCGTGAGCGCAACAACGACCCCGAGCTGCCCACAACGTCCCGTACCGCTGTGCCGCTTAATCCTGGCCGACGCGTCACACGCCTGCAAAGGCGCCAGGTGGAACAGCAAGAGGACCAGAAACAACCGTTCATCCGGGACGATGCCGATGGCCATCTGATCTACCAGATCGGTGATATCCTCCATAACAGATATAAAATACTTGCCACCCTCGGCGAGGGTACGTTTGGACGCGTCGTCAAGGTGAAGGACTTGGAGCGCAACCACGTCATGGCGCTGAAGATCATCAAGAACGTGGAGAAGTATCGTGACGCGGCCGAGCTGGAAATTGGTGCGCTGGAAAAGATCATGCAGCTCGATCCCAACCTGGAGCACTTGTGCGTGAAAATGCTAGACTGGTTCGACTACCACGGCCATACGTGTATCGCTTTCGAGATGCTTGGGCTGAGTGTTTTCGACTTCCTGAAAGACAACAACTACGAGCCATATCCGATCGAGCACGTACGGNACATCTTCCTACCAGCTGTGCTACGCCGTCAAGTTCCTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM630286             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccGCGTGAAAATGCTAGACTGGTTCGACTACCACGGCCATACGTGTATCGCTTTCGAGATGCTTGGGCTGAGTGTTTTCGACTTCCTGAAAGACAACAACTACGAGCCATATCCGATCGAGCACGTACGGCACATC TCCTACCAGCTGTGCTACGCCGTCAAGTTCCTGCACGAGAGCCGCCTCACGCACACGGACCTGAAGCCGGAAAACATACTGTTCGTCGACTCGGAGTACACCACCACGACGGTCCCACGCAAGAACCGCGAGGTGCGCCGCGTCAACTGTACCGATATTCGACTGATCGATTTTGGCAGCGCCACGTTTGACGACGAGCACCACAGCACCATCGTCTCCACCCGGCACTATCGCGCACCGGAAGTGATCCTCGAGCTCGGCTGGTCGCAGCCCTGTGACGTTTGGTCGATCGGCTGCATCATGTTCGAGCTGTACCAGGGCGTAACGCTCTTCCCAACGCACGACAATCGCGAACATCTGGCCATGATGGGAACGGATCCTGGGCACCATCCCTTACCGCATGGCAAGGCAAACACGGTCCAAGTACTTCCGCTATGGCAAGCTGGACTGGGGACGAGAAGTCTTCCACCGGGCGGTACGTGCGGGACAACTGCAAGCCGCT]


>consensus_6944#0 GTGCCGAAGTGCAACCGGTTGCCAAACGAGAGCAGCGAACACGGCAACGGCAACAACAAC TCGATCTGTCTCACGCTCGCGACCAGCAGTTACGGCGGCGAAGACATTGACCAACAGCAG CAGCAGCGGCCTACAAAGATTGGAGTTGCAGCGAACCACACTGCTGCAGCAACAGTAGCA GCAGCAGCAGTACCACCAACCAGTCGCAAAGGTGTACCCATTCCAGCATCGACGAGGCAC GGCCAGCTCAATCCGGACGCTGGCCGATGGGAGCGTGAGCGCAACAACGACCCCGAGCTG CCCACAACGTCCCGTACCGCTGTGCCGCTTAATCCTGGCCGACGCGTCACACGCCTGCAA AGGCGCCAGGTGGAACAGCAAGAGGACCAGAAACAACCGTTCATCCGGGACGATGCCGAT GGCCATCTGATCTACCAGATCGGTGATATCCTCCATAACAGATATAAAATACTTGCCACC CTCGGCGAGGGTACGTTTGGACGCGTCGTCAAGGTGAAGGACTTGGAGCGCAACCACGTC ATGGCGCTGAAGATCATCAAGAACGTGGAGAAGTATCGTGACGCGGCCGAGCTGGAAATT GGTGCGCTGGAAAAGATCATGCAGCTCGATCCCAACCTGGAGCACTTGTGCGTGAAAATG CTAGACTGGTTCGACTACCACGGCCATACGTGTATCGCTTTCGAGATGCTTGGGCTGAGT GTTTTCGACTTCCTGAAAGACAACAACTACGAGCCATATCCGATCGAGCACGTACGGNAC ATCTTCCTACCAGCTGTGCTACGCCGTCAAGTTCCTGCACGAGAGCCGCCTCACGCACAC GGACCTGAAGCCGGAAAACATACTGTTCGTCGACTCGGAGTACACCACCACGACGGTCCC ACGCAAGAACCGCGAGGTGCGCCGCGTCAACTGTACCGATATTCGACTGATCGATTTTGG CAGCGCCACGTTTGACGACGAGCACCACAGCACCATCGTCTCCACCCGGCACTATCGCGC ACCGGAAGTGATCCTCGAGCTCGGCTGGTCGCAGCCCTGTGACGTTTGGTCGATCGGCTG CATCATGTTCGAGCTGTACCAGGGCGTAACGCTCTTCCCAACGCACGACAATCGCGAACA TCTGGCCATGATGGGAACGGATCCTGGGCACCATCCCTTACCGCATGGCAAGGCAAACAC GGTCCAAGTACTTCCGCTATGGCAAGCTGGACTGGGGACGAGAAGTCTTCCACCGGGCGG TACGTGCGGGACAACTGCAAGCCGCT



consensusID : consensus_6944#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 686
fasta sequence
                              [CCGCGGACGCGTGGGCTCCTACCAGCTGTGCTACGCCGTCAAGTTCCTGCACGAGAGCCGCCTCACGCACACGGACCTGAAGCCGGAAAACATACTGTTCGTCGACTCGGAGTACACCACCACGACGGTCCCACGCAAGAACCGCGAGGTGCGCCGCGTCAACTGTACCGATATTCGACTGATCGATTTTGGCAGCGCCACGTTTGACGACGAGCACCACAGCACCATCGTCTCCACCCGGCACTATCGCGCACCGGAAGTGATCCTCGAACTCGGCTGGTCGCAGCCCTGTGACGTTTGGTCGATCGGCTGCATCATGTTCGAGCTGTACCAGGGCGTAACGCTCTTCCCAACGCACGACAATCGCGAACATCTGGCCATGATGGAACGGATCCTGGGCACCATCCCTTACCGCATGGCAAGGCAAACACGGTCCAAGTACTTCCGCTATGGCAAGCTGGACTGGGACGAGAAGTCTTCCACCGGGCGGTACGTGCGGGACAACTGCAAGCCGCTCCATCGATGCGTCATCACCGACAAGCCAGACCACCTGCAGCTGTTCGATCTGATTCGCAAGATGCTGGAATACGAACCCTCCAAGCGCATCACACTGGACAAGGCTCTGCGGCATCCGTTCTTCGCGAAGCTTCCCGCACACCAGCGCCTGCACGAGAAATGTAATGACA]

[+] EMBL BM614520             [CCGCGGACGCGTGGGCTCCTACCAGCTGTGCTACGCCGTCAAGTTCCTGCACGAGAGCCGCCTCACGCACACGGACCTGAAGCCGGAAAACATACTGTTCGTCGACTCGGAGTACACCACCACGACGGTCCCACGCAAGAACCGCGAGGTGCGCCGCGTCAACTGTACCGATATTCGACTGATCGATTTTGGCAGCGCCACGTTTGACGACGAGCACCACAGCACCATCGTCTCCACCCGGCACTATCGCGCACCGGAAGTGATCCTCGAACTCGGCTGGTCGCAGCCCTGTGACGTTTGGTCGATCGGCTGCATCATGTTCGAGCTGTACCAGGGCGTAACGCTCTTCCCAACGCACGACAATCGCGAACATCTGGCCATGATGGAACGGATCCTGGGCACCATCCCTTACCGCATGGCAAGGCAAACACGGTCCAAGTACTTCCGCTATGGCAAGCTGGACTGGGACGAGAAGTCTTCCACCGGGCGGTACGTGCGGGACAACTGCAAGCCGCTCCATCGATGCGTCATCACCGACAAGCCAGACCACCTGCAGCTGTTCGATCTGATTCGCAAGATGCTGGAATACGAACCCTCCAAGCGCATCACACTGGACAAGGCTCTGCGGCATCCGTTCTTCGCGAAGCTTCCCGCACACCAGCGCCTGCACGAGAAATGTAATGACA]


>consensus_6944#1 CCGCGGACGCGTGGGCTCCTACCAGCTGTGCTACGCCGTCAAGTTCCTGCACGAGAGCCG CCTCACGCACACGGACCTGAAGCCGGAAAACATACTGTTCGTCGACTCGGAGTACACCAC CACGACGGTCCCACGCAAGAACCGCGAGGTGCGCCGCGTCAACTGTACCGATATTCGACT GATCGATTTTGGCAGCGCCACGTTTGACGACGAGCACCACAGCACCATCGTCTCCACCCG GCACTATCGCGCACCGGAAGTGATCCTCGAACTCGGCTGGTCGCAGCCCTGTGACGTTTG GTCGATCGGCTGCATCATGTTCGAGCTGTACCAGGGCGTAACGCTCTTCCCAACGCACGA CAATCGCGAACATCTGGCCATGATGGAACGGATCCTGGGCACCATCCCTTACCGCATGGC AAGGCAAACACGGTCCAAGTACTTCCGCTATGGCAAGCTGGACTGGGACGAGAAGTCTTC CACCGGGCGGTACGTGCGGGACAACTGCAAGCCGCTCCATCGATGCGTCATCACCGACAA GCCAGACCACCTGCAGCTGTTCGATCTGATTCGCAAGATGCTGGAATACGAACCCTCCAA GCGCATCACACTGGACAAGGCTCTGCGGCATCCGTTCTTCGCGAAGCTTCCCGCACACCA GCGCCTGCACGAGAAATGTAATGACA



consensusID : consensus_6944#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 680
fasta sequence
                              [CCGGTCCGGTCACCAGCACGGTCCCGAGCACAATCCGCGGCAGTGGCCCGAACGGCGAGCTCACGCTCAAGGACGTGCCGGTGTCGGGCATTTCGTTCCAGGAGATCTTTAAGCCGGACCACGAGGGCCCACCGACCACGCAGGTCATCATCTACAAGCCGAAATCTGGCCGGGGCCAACCGACGGCGAAAGTGATCGTCACCAAGAAACAACCGTTCATCCGGGACGATGCCGATGGCCATCTGATCTACCAGATCGGTGATATCCTCCATAACAGATATAAAATACTTGCCACCCTCGGCGAGGGTACGTTTGGACGCGTCGTCAAGGTGAAGGACTTGGAGCGCAACCACGTCATGGCGCTGAAGATCATCAAGAACGTGGAGAAGTATCGTGACGCGGCCGAGCTGGAAATTGGTGCGCTGGAAAAGATCATGCAGCTCGATCCCAACCTGGAGCACTTGTGCGTGAAAATGCTAGACTGGTTCGACTACCACGGCCATACGTGTATCGCTTTCGAGATGCTTGGGCTGAGTGTTTTCGACTTCCTGAAAGACAACAACTACGAGCCATATCCGATCGAGCACGTACGGCACATCTCCTACCAGCTGTGCTACGCCGTCAAGTTCCTGCACGAGAGCCGCCTCACGCACACGGCACCTGAAGCCGGAAAACATACT]

[+] EMBL BM646209             [CCGGTCCGGTCACCAGCACGGTCCCGAGCACAATCCGCGGCAGTGGCCCGAACGGCGAGCTCACGCTCAAGGACGTGCCGGTGTCGGGCATTTCGTTCCAGGAGATCTTTAAGCCGGACCACGAGGGCCCACCGACCACGCAGGTCATCATCTACAAGCCGAAATCTGGCCGGGGCCAACCGACGGCGAAAGTGATCGTCACCAAGAAACAACCGTTCATCCGGGACGATGCCGATGGCCATCTGATCTACCAGATCGGTGATATCCTCCATAACAGATATAAAATACTTGCCACCCTCGGCGAGGGTACGTTTGGACGCGTCGTCAAGGTGAAGGACTTGGAGCGCAACCACGTCATGGCGCTGAAGATCATCAAGAACGTGGAGAAGTATCGTGACGCGGCCGAGCTGGAAATTGGTGCGCTGGAAAAGATCATGCAGCTCGATCCCAACCTGGAGCACTTGTGCGTGAAAATGCTAGACTGGTTCGACTACCACGGCCATACGTGTATCGCTTTCGAGATGCTTGGGCTGAGTGTTTTCGACTTCCTGAAAGACAACAACTACGAGCCATATCCGATCGAGCACGTACGGCACATCTCCTACCAGCTGTGCTACGCCGTCAAGTTCCTGCACGAGAGCCGCCTCACGCACACGGCACCTGAAGCCGGAAAACATACT]


>consensus_6944#2 CCGGTCCGGTCACCAGCACGGTCCCGAGCACAATCCGCGGCAGTGGCCCGAACGGCGAGC TCACGCTCAAGGACGTGCCGGTGTCGGGCATTTCGTTCCAGGAGATCTTTAAGCCGGACC ACGAGGGCCCACCGACCACGCAGGTCATCATCTACAAGCCGAAATCTGGCCGGGGCCAAC CGACGGCGAAAGTGATCGTCACCAAGAAACAACCGTTCATCCGGGACGATGCCGATGGCC ATCTGATCTACCAGATCGGTGATATCCTCCATAACAGATATAAAATACTTGCCACCCTCG GCGAGGGTACGTTTGGACGCGTCGTCAAGGTGAAGGACTTGGAGCGCAACCACGTCATGG CGCTGAAGATCATCAAGAACGTGGAGAAGTATCGTGACGCGGCCGAGCTGGAAATTGGTG CGCTGGAAAAGATCATGCAGCTCGATCCCAACCTGGAGCACTTGTGCGTGAAAATGCTAG ACTGGTTCGACTACCACGGCCATACGTGTATCGCTTTCGAGATGCTTGGGCTGAGTGTTT TCGACTTCCTGAAAGACAACAACTACGAGCCATATCCGATCGAGCACGTACGGCACATCT CCTACCAGCTGTGCTACGCCGTCAAGTTCCTGCACGAGAGCCGCCTCACGCACACGGCAC CTGAAGCCGGAAAACATACT



consensusID : consensus_6944#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 584
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCCCGTGTACGACGATAGTATTGTGTGCATAAACGTGTTATGCAAACACAGCCAGCTGAATATAAGCAAGCCTATTGTACAGTGCAGCCAAAAGTAACACACCAGCACCAGCAGCAGCAGCAGCAGCAGGATGAAGCGGGAAGGATCCTCACTGCCGGCGGCGAACAAGCGCCACAGAACGGTACCAACACTAATGCCCCCGATAAACCAACCGACGGCGAAAGTGATCGTCACCAAGAAACAACCGTTCATCCGGGACGATGCCGATGGCCATCTGATCTACCAAATCGGTGATATCCTCCATAACAGATATAAAATACTTGCCACCCTCGGCGAGGGTACGTTTGGACGCGTCGTCAAGGTGAAGGACTTGGAGCGCAACCACGTCATGGCGCTGAATATCATCAAGAACGTGGAGAAGTATCGTGACGCGGCCGAGCTGGAAATTGGTGCGCTGGAAAAGATCATGCAGCTCGATCCCAACCTGGAGCACTTGTGCGTGAAAATGCTAGACTGGTTCGACTACCACGGGCATACGTGTATCGCTTTCGAGATGCT]

[+] EMBL BM636839             [CCGCCCACGCGTCCGCCCACGCGTCCGCCCGTGTACGACGATAGTATTGTGTGCATAAACGTGTTATGCAAACACAGCCAGCTGAATATAAGCAAGCCTATTGTACAGTGCAGCCAAAAGTAACACACCAGCACCAGCAGCAGCAGCAGCAGCAGGATGAAGCGGGAAGGATCCTCACTGCCGGCGGCGAACAAGCGCCACAGAACGGTACCAACACTAATGCCCCCGATAAACCAACCGACGGCGAAAGTGATCGTCACCAAGAAACAACCGTTCATCCGGGACGATGCCGATGGCCATCTGATCTACCAAATCGGTGATATCCTCCATAACAGATATAAAATACTTGCCACCCTCGGCGAGGGTACGTTTGGACGCGTCGTCAAGGTGAAGGACTTGGAGCGCAACCACGTCATGGCGCTGAATATCATCAAGAACGTGGAGAAGTATCGTGACGCGGCCGAGCTGGAAATTGGTGCGCTGGAAAAGATCATGCAGCTCGATCCCAACCTGGAGCACTTGTGCGTGAAAATGCTAGACTGGTTCGACTACCACGGGCATACGTGTATCGCTTTCGAGATGCT]


>consensus_6944#3 CCGCCCACGCGTCCGCCCACGCGTCCGCCCGTGTACGACGATAGTATTGTGTGCATAAAC GTGTTATGCAAACACAGCCAGCTGAATATAAGCAAGCCTATTGTACAGTGCAGCCAAAAG TAACACACCAGCACCAGCAGCAGCAGCAGCAGCAGGATGAAGCGGGAAGGATCCTCACTG CCGGCGGCGAACAAGCGCCACAGAACGGTACCAACACTAATGCCCCCGATAAACCAACCG ACGGCGAAAGTGATCGTCACCAAGAAACAACCGTTCATCCGGGACGATGCCGATGGCCAT CTGATCTACCAAATCGGTGATATCCTCCATAACAGATATAAAATACTTGCCACCCTCGGC GAGGGTACGTTTGGACGCGTCGTCAAGGTGAAGGACTTGGAGCGCAACCACGTCATGGCG CTGAATATCATCAAGAACGTGGAGAAGTATCGTGACGCGGCCGAGCTGGAAATTGGTGCG CTGGAAAAGATCATGCAGCTCGATCCCAACCTGGAGCACTTGTGCGTGAAAATGCTAGAC TGGTTCGACTACCACGGGCATACGTGTATCGCTTTCGAGATGCT



consensusID : consensus_6944#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 571
fasta sequence
                              [CCGTTCAACCGGTTCAGTCGTCTCTTAGAGTTTCTTCCTCGGTGTTCGTTGAAATCTTTGACCCAACGTGTGTTGTACGAAGTCAGCTTACGGCGTTGTACAGAGCATTGCCTGGAATTATTCCACAGTGTTGTGCGTCGTCGAGTGATTAGAATTTTGTGAAGAACAATTGTGAGTGATAAAGACTATAAAAGTAAACTTGAAGCAAAAACAAAACCCCGGCTCGCGGAAAAGTCGTTCGATCTCGTGAAGTTGCACGCGGTTGTTTTTCGCGATTGTGAATTGGTGCTGTGTGTGCGCAAACCCCCGTGTACGACGATAGTATTGTGTTATGCAAACACAGCCAGCTGAATATAAGCAAGCCTATTGTACAGTGCAGCCAAAAGTAACACACCAGCACCAGCAGCAGCAGCAGCAGCAGTATGAAGCGGGAAGGATCCTCACTGCCGGCGGCGAACAAGCGCCACAGAACGGTACCAACACTAATGCCCCCAAAAAAAAACCCACCGGTCCGGGTGGCCCCGTAGCACCGGCGGCGCCCACCACCACTGCCACCAGTGACGCCCGTAGC]

[+] EMBL BM644596             [CCGTTCAACCGGTTCAGTCGTCTCTTAGAGTTTCTTCCTCGGTGTTCGTTGAAATCTTTGACCCAACGTGTGTTGTACGAAGTCAGCTTACGGCGTTGTACAGAGCATTGCCTGGAATTATTCCACAGTGTTGTGCGTCGTCGAGTGATTAGAATTTTGTGAAGAACAATTGTGAGTGATAAAGACTATAAAAGTAAACTTGAAGCAAAAACAAAACCCCGGCTCGCGGAAAAGTCGTTCGATCTCGTGAAGTTGCACGCGGTTGTTTTTCGCGATTGTGAATTGGTGCTGTGTGTGCGCAAACCCCCGTGTACGACGATAGTATTGTGTTATGCAAACACAGCCAGCTGAATATAAGCAAGCCTATTGTACAGTGCAGCCAAAAGTAACACACCAGCACCAGCAGCAGCAGCAGCAGCAGTATGAAGCGGGAAGGATCCTCACTGCCGGCGGCGAACAAGCGCCACAGAACGGTACCAACACTAATGCCCCCAAAAAAAAACCCACCGGTCCGGGTGGCCCCGTAGCACCGGCGGCGCCCACCACCACTGCCACCAGTGACGCCCGTAGC]


>consensus_6944#4 CCGTTCAACCGGTTCAGTCGTCTCTTAGAGTTTCTTCCTCGGTGTTCGTTGAAATCTTTG ACCCAACGTGTGTTGTACGAAGTCAGCTTACGGCGTTGTACAGAGCATTGCCTGGAATTA TTCCACAGTGTTGTGCGTCGTCGAGTGATTAGAATTTTGTGAAGAACAATTGTGAGTGAT AAAGACTATAAAAGTAAACTTGAAGCAAAAACAAAACCCCGGCTCGCGGAAAAGTCGTTC GATCTCGTGAAGTTGCACGCGGTTGTTTTTCGCGATTGTGAATTGGTGCTGTGTGTGCGC AAACCCCCGTGTACGACGATAGTATTGTGTTATGCAAACACAGCCAGCTGAATATAAGCA AGCCTATTGTACAGTGCAGCCAAAAGTAACACACCAGCACCAGCAGCAGCAGCAGCAGCA GTATGAAGCGGGAAGGATCCTCACTGCCGGCGGCGAACAAGCGCCACAGAACGGTACCAA CACTAATGCCCCCAAAAAAAAACCCACCGGTCCGGGTGGCCCCGTAGCACCGGCGGCGCC CACCACCACTGCCACCAGTGACGCCCGTAGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6944#3      ------------------------------------------------------------
consensus_6944#4      ------------------------------------------------------------
consensus_6944#0      GTGCCGAAGTGCAACCGGTTGCCAAACGAGAGCAGCGAACACGGCAACGGCAACAACAAC 60
consensus_6944#1      ------------------------------------------------------------
consensus_6944#2      ------------------------------------------------------------
                                                                                  

consensus_6944#3      ------------------------------------------------------------
consensus_6944#4      ------------------------------------------------------------
consensus_6944#0      TCGATCTGTCTCACGCTCGCGACCAGCAGTTACGGCGGCGAAGACATTGACCAACAGCAG 120
consensus_6944#1      ------------------------------------------------------------
consensus_6944#2      ------------------------------------------------------------
                                                                                  

consensus_6944#3      ------------------------------------------------------------
consensus_6944#4      ------------------------------------------------------------
consensus_6944#0      CAGCAGCGGCCTACAAAGATTGGAGTTGCAGCGAACCACACTGCTGCAGCAACAGTAGCA 180
consensus_6944#1      ------------------------------------------------------------
consensus_6944#2      ------------------------------------------------------------
                                                                                  

consensus_6944#3      ------------------------------------------------------------
consensus_6944#4      ------------------------------------------------------------
consensus_6944#0      GCAGCAGCAGTACCACCAACCAGTCGCAAAGGTGTACCCATTCCAGCATCGACGAGGCAC 240
consensus_6944#1      ------------------------------------------------------------
consensus_6944#2      ------------------------------------------------------------
                                                                                  

consensus_6944#3      ------------------------------------------------------------
consensus_6944#4      ------------------------------------------------------------
consensus_6944#0      GGCCAGCTCAATCCGGACGCTGGCCGATGGGAGCGTGAGCGCAACAACGACCCCGAGCTG 300
consensus_6944#1      ------------------------------------------------------------
consensus_6944#2      ------------------------------------------------------------
                                                                                  

consensus_6944#3      ------------------------------------------------------------
consensus_6944#4      ------------------------------------------------------------
consensus_6944#0      CCCACAACGTCCCGTACCGCTGTGCCGCTTAATCCTGGCCGACGCGTCACACGCCTGCAA 360
consensus_6944#1      ------------------------------------------------------------
consensus_6944#2      ------------------------------------------------------------
                                                                                  

consensus_6944#3      ------------------------------------------------------------
consensus_6944#4      ------------------------------------------------------------
consensus_6944#0      AGGCGCCAGGTGGAACAGCAAGAGGACCAGAAACAACCGTTCATCCGGGACGATGCCGAT 420
consensus_6944#1      ------------------------------------------------------------
consensus_6944#2      ------------------------------------------------------------
                                                                                  

consensus_6944#3      ------------------------------------------------------------
consensus_6944#4      ------------------------------------------------------------
consensus_6944#0      GGCCATCTGATCTACCAGATCGGTGATATCCTCCATAACAGATATAAAATACTTGCCACC 480
consensus_6944#1      ------------------------------------------------------------
consensus_6944#2      ------------------------------------------------------------
                                                                                  

consensus_6944#3      ------------------------------------------------------------
consensus_6944#4      ------------------------------------------------------------
consensus_6944#0      CTCGGCGAGGGTACGTTTGGACGCGTCGTCAAGGTGAAGGACTTGGAGCGCAACCACGTC 540
consensus_6944#1      ------------------------------------------------------------
consensus_6944#2      ------------------------------------------------------------
                                                                                  

consensus_6944#3      ------------------------------------------------------------
consensus_6944#4      ------------------------------------------------------------
consensus_6944#0      ATGGCGCTGAAGATCATCAAGAACGTGGAGAAGTATCGTGACGCGGCCGAGCTGGAAATT 600
consensus_6944#1      ------------------------------------------------------------
consensus_6944#2      ------------------------------------------------------------
                                                                                  

consensus_6944#3      ------------------------------------------------------------
consensus_6944#4      ------------------------------------------------------------
consensus_6944#0      GGTGCGCTGGAAAAGATCATGCAGCTCGATCCCAACCTGGAGCACTTGTGCGTGAAAATG 660
consensus_6944#1      ------------------------------------------------------------
consensus_6944#2      ------------------------------------------------------------
                                                                                  

consensus_6944#3      ------------------------------------------------------------
consensus_6944#4      ------------------------------------------------------------
consensus_6944#0      CTAGACTGGTTCGACTACCACGGCCATACGTGTATCGCTTTCGAGATGCTTGGGCTGAGT 720
consensus_6944#1      ------------------------------------------------------------
consensus_6944#2      ------------------------------------------------------------
                                                                                  

consensus_6944#3      ---------------------------------------------------CCGCCCACG 9
consensus_6944#4      ------------------------------------------CCGTTCAACCGGTTCAGT 18
consensus_6944#0      GTTTTCGACTTCCTGAAAGACAACAACTACGAGCCATATCCGATCGAGCACGTACGGNAC 780
consensus_6944#1      -------------------------------------------CCGCGGACGCGTGGG-- 15
consensus_6944#2      ----------------------------CCGGTCCGGTCACCAGCACGGTCCCGAGCA-- 30
                                                                                  

consensus_6944#3      CGTCCGCCCACGCGTCCGCCC--GTGTACGACGATAGTATTGTGTGCATAAACGTGTTAT 67
consensus_6944#4      CGTCTCTTAGAGTTTCTTCCTCGGTGTTCGTTGAAATCTTTG-ACCCA-ACGTGTGTTGT 76
consensus_6944#0      ATCTTCCTACCAGCTGTGCTACGC-CGTCAAGTTCCTGCACGAGAGCCGCCTCACGCA-C 838
consensus_6944#1      ---CTCCTACCAGCTGTGCTACGC-CGTCAAGTTCCTGCACGAGAGCCGCCTCACGCA-C 70
consensus_6944#2      ---CAATCCGCGGCAGTGGCCCGAACGGCGAGCTCACGCTCAAGGACGTGCCGGTGT--C 85
                                                  *                 *        *    

consensus_6944#3      GCAAACACAGCCAGCTGAATATAAGCAAGCCTATTGTACAGTGCAGCCAAAAGTAACACA 127
consensus_6944#4      ACGAAGTCAGCTTACGGCGTTGTACAGAGCATTGCCTGGAAT-TATTCCACAGTGTTGTG 135
consensus_6944#0      ACGGACCTGAAGCCGGAAAACATACTGTTCGTCGACTCGGAGTACACC-ACCACGACGGT 897
consensus_6944#1      ACGGACCTGAAGCCGGAAAACATACTGTTCGTCGACTCGGAGTACACC-ACCACGACGGT 129
consensus_6944#2      GGGCATTTCGTTCCAGGAGATCTTTAAGCCGGACCACGAGGGCCCACCGACCACGCAGGT 145
                          *                        *                 * *          

consensus_6944#3      CCAGCACCAGCAGCAGCAGCAGCAGCAGGATGAAGCGGGAAGGATCCTCACTGCCGGCGG 187
consensus_6944#4      CGTCGTCGAGTGATTAGAATTTTGTGAAGAACAATTGTGAGTGATAAAGACTATAAAAGT 195
consensus_6944#0      C-CCACGCAAGAACCGCGAGGTGCGCCGCGTCAACTGT-ACCGATATTCG--ACTGATCG 953
consensus_6944#1      C-CCACGCAAGAACCGCGAGGTGCGCCGCGTCAACTGT-ACCGATATTCG--ACTGATCG 185
consensus_6944#2      CATCATCTACAAGCCGAAATCTGGCCGGGGCCAACCG--ACGGCGA---A--AGTGATCG 198
                      *       *                       **  *  *  *                 

consensus_6944#3      CGAACAAGCGCCACAGAACGGTACCAACAC-TAATGCCCCCGATAAACCAACCGACGGCG 246
consensus_6944#4      AAACTTGAAGCAAAAACAAAACCCCGGCTCGCGGAAAAGTCGTTCGATCTCGTGAAGTTG 255
consensus_6944#0      ATTTTGGCAGCGCCACGTTTGACGACGAGCACCACAGCA-CCATCGTCTCCACCCGG-CA 1011
consensus_6944#1      ATTTTGGCAGCGCCACGTTTGACGACGAGCACCACAGCA-CCATCGTCTCCACCCGG-CA 243
consensus_6944#2      TCACCAAGAAACAACCGTTCATCCGGGACGATGCCGATGGCCATCTGATCTACCAGATCG 258
                                                              *  *                

consensus_6944#3      AAAGTGATCGTCACCAAGAAACAACCGTTCATCCGGGACGATGCCGATGGCCATCTGATC 306
consensus_6944#4      CACGCGGTTGTTTTTCGCGATTGTGAATTGGTGCTGTGTG-TGCGCAAACCCCCGTGTAC 314
consensus_6944#0      CTATCGCGCACCGGAAGTGATCCTCGAGCTCGGCTGGTCGCAGCCCTGTGACGTTTGGTC 1071
consensus_6944#1      CTATCGCGCACCGGAAGTGATCCTCGAACTCGGCTGGTCGCAGCCCTGTGACGTTTGGTC 303
consensus_6944#2      GTGATATCCTCCATAACAGATATAAAATACTTGCCACCCTCGGCGAGGGTACGTTTGGAC 318
                                         *             *        **       *   **  *

consensus_6944#3      T--ACCAAATCGGTGATATCCTCCATAACAGATA-TAAAATACTTGCCACCCTCGGCGAG 363
consensus_6944#4      G--ACGATAGTATTGTGTTATGCAAACACAGCCAGCTGAATATAAGCAAGCCTATTGTAC 372
consensus_6944#0      G-ATCGGCTGCATCATG---TTCGAGCTGTACCA-GGGCGTAACGCTCTTCCCAACGCAC 1126
consensus_6944#1      G-ATCGGCTGCATCATG---TTCGAGCTGTACCA-GGGCGTAACGCTCTTCCCAACGCAC 358
consensus_6944#2      GCGTCGTCAAGGTGAAGGACTTGGAGCGCAACCA-CGTCATGGCGCTGAAGATCATCAAG 377
                          *                   *        *      *                 * 

consensus_6944#3      GGTACGTTTGGACGC---GTCGT-CAAGGTGAAGGACTTGGAGCGCAACCACGTCATGGC 419
consensus_6944#4      AGTGCAGCCAAAAGT---AACACACCAGCACCAGCAGCAGCAGCAGCAGCAGTATGAAGC 429
consensus_6944#0      GACAATCGCGAACATCTGGCCATGATGGGAACGGATCCTGG-GCACCATCCCTTACCGCA 1185
consensus_6944#1      GACAATCGCGAACATCTGGCCATGATGG-AACGGATCCTGG-GCACCATCCCTTACCGCA 416
consensus_6944#2      AACGTGGAGAAGTATCGTGACGCGGCCGAGCTGGAAATTGGTGCGCTGGAAAAGATCAT- 436
                                          *      *     *     *  **                

consensus_6944#3      GCTGAATATCATCAAGAACG-TGGAGAAGTATCGTGACGCGGCCGAGCTGGAAATTG--- 475
consensus_6944#4      GGGAAGGATCCTCACTGCCGGCGGCGAACAAGCGCCACAGAACGGTACCAACACTAA--- 486
consensus_6944#0      TGGCAAGGCAAACACGGTCCA-AGTACTTCCGCTATGGCAAGCTGGACTGGGGACGAGAA 1244
consensus_6944#1      TGGCAAGGCAAACACGGTCCA-AGTACTTCCGCTATGGCAAGCTGGACTGGG-ACGAGAA 474
consensus_6944#2      --GCAGCTCGATCCCAACCTGGAGCACTTGTGCGTGAAAATGCTAGACTGGT-TCGA--- 490
                          *       *     *    *        *         *    *            

consensus_6944#3      --GTGCGCTGGAAAAGATCATGCAGCTCGATCCCAACCTGGAGCACTTGTGCGTGAAAAT 533
consensus_6944#4      --TGCCCCCAAAAAAAAACCCACCGGTCCGGGTGGCCCCGTAGCACCGGCG-------GC 537
consensus_6944#0      GTCTTCCACCGGGCGGTACGTGCGGGACAACTGCAAGCCGCT------------------ 1286
consensus_6944#1      GTCTTCCACCGGGCGGTACGTGCGGGACAACTGCAAGCCGCTCCATCGATGCGTCATCAC 534
consensus_6944#2      --CTACCAC--GGCCATACGTGTAT--CGCTTTCGAGATGCTTGGGCTGAGTGTTTTCGA 544
                           *            *        *           *                    

consensus_6944#3      GCTAGACTGGTTCGACTACCACGGGCATACGTGTATCGCTTTCGAGATGCT--------- 584
consensus_6944#4      GC----CCACCACCACTGCCACCAGTG-ACGCCCGTAGC--------------------- 571
consensus_6944#0      ------------------------------------------------------------
consensus_6944#1      CGACAAGCCAGACCACCTGCAGCTGTTCGATCTGATTCGCAAGATGCTGGAATACGAACC 594
consensus_6944#2      CTTCCTGAAAGACAACAACTACGAGCCATATCCGATCGAGCACGTAC-GGCACATCT-CC 602
                                                                                  

consensus_6944#3      ------------------------------------------------------------
consensus_6944#4      ------------------------------------------------------------
consensus_6944#0      ------------------------------------------------------------
consensus_6944#1      CTCCAAGCGCATCACACTGGACAAGGCTCTGCGGCATCCGTTCTTCGCGAAGCTTCCCGC 654
consensus_6944#2      TACCAGCTGTGCTACGCCGT-CAAGTTCCTGCACGA----------GAGCCGCCTCACGC 651
                                                                                  

consensus_6944#3      ----------------------------------
consensus_6944#4      ----------------------------------
consensus_6944#0      ----------------------------------
consensus_6944#1      ACACCAGCGCCTGCA--CGAGAAATGTAATGACA 686
consensus_6944#2      ACAC-GGCACCTGAAGCCGGAAAACATACT---- 680
                                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)