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Anopheles gambiae
cluster # 6959 cluster # 6959       Sequences # 6       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6959#0 length = 958 sequences # 1  
consensus_6959#1 length = 935 sequences # 1  
consensus_6959#2 length = 889 sequences # 3  
consensus_6959#3 length = 709 sequences # 1  

consensusID : consensus_6959#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 958
fasta sequence
                              [GAATCGGCGAGGCNTTACTGGGGCCGGCTTGAGTACGACACGCGCTGGGCGAACCGAACAAAGGGCGCGACCTGTGGTACAGTGTGATGGCCAGCTCCGATAATTCGTCCCGTGTCGGACTGTGGATTGAGTTTATCGAAATGGAAGCAAAACGAGGCCCCGAAGCAGCGCGTAAACTGTACCGCAAATCCATTACCACCGCTGGGCTGGATGATCCCGAAACGCTGGCTGCCGCTTGGTTGCGATTCGGAGCGGTGCCAACGGTTCGCTGGAGCAGCTGATAAGCTGCCAGGAGCTGTGCAATGCTACGATCGAGAAGTACTACAAGACCATTTCCAAAAATGGTCCGTCAAATCGTGCAAACGAAGGGCAAGCGTTCAGAAGCGACCGGAACAACCGACACAAGGATTCGGACGCATCGGTCGCGAAAAGACAGGCCTCTTCCATGGACGGAGCCGGCGGTTCACCACCGGGGGAAGAAAAAAAGTGAAACGAACCAACGATAATCTGTCCGATACGGTGGGAGAACGGCAGGAAGAGTTTAAAACACCGGCGCATTCCAACCCTCCATAGCAGGCTCCAAAAATCATGACCTCAGCAAAACCGGAGCCATCCAAGAGCCGAAACCGTAATCGACATCGATAGCGAAAGCGACGCGAAAGCTGGCGGCGACCAAAGCCGACAGGTGTTCGTCAGCGAATCTTAGCTTTGAGGGTAACGGAAACAGATATCCGCGAGGATTTTCCCCGACTAGACGATCGAATCGAATAGAAACTGGTCCGCCTTCGCAGATTTCCAGGGNCAAAAAAGCCCGTTGGCTTCCGGCTATATTGCCAGCTTGGCCAGCTTTGCAAAAGAAAATCCCNAAACGCTTCAGTTTCTACCGACGTCCACTGAACCGGTCCGCCGGTTTTCATATCGATTTNGCGCGACAAGAAATTCGCCACCATANTTNAAA]

[+] EMBL BX468606             [GAATCGGCGAGGCNTTACTGGGGCCGGCTTGAGTACGACACGCGCTGGGCGAACCGAACAAAGGGCGCGACCTGTGGTACAGTGTGATGGCCAGCTCCGATAATTCGTCCCGTGTCGGACTGTGGATTGAGTTTATCGAAATGGAAGCAAAACGAGGCCCCGAAGCAGCGCGTAAACTGTACCGCAAATCCATTACCACCGCTGGGCTGGATGATCCCGAAACGCTGGCTGCCGCTTGGTTGCGATTCGGAGCGGTGCCAACGGTTCGCTGGAGCAGCTGATAAGCTGCCAGGAGCTGTGCAATGCTACGATCGAGAAGTACTACAAGACCATTTCCAAAAATGGTCCGTCAAATCGTGCAAACGAAGGGCAAGCGTTCAGAAGCGACCGGAACAACCGACACAAGGATTCGGACGCATCGGTCGCGAAAAGACAGGCCTCTTCCATGGACGGAGCCGGCGGTTCACCACCGGGGGAAGAAAAAAAGTGAAACGAACCAACGATAATCTGTCCGATACGGTGGGAGAACGGCAGGAAGAGTTTAAAACACCGGCGCATTCCAACCCTCCATAGCAGGCTCCAAAAATCATGACCTCAGCAAAACCGGAGCCATCCAAGAGCCGAAACCGTAATCGACATCGATAGCGAAAGCGACGCGAAAGCTGGCGGCGACCAAAGCCGACAGGTGTTCGTCAGCGAATCTTAGCTTTGAGGGTAACGGAAACAGATATCCGCGAGGATTTTCCCCGACTAGACGATCGAATCGAATAGAAACTGGTCCGCCTTCGCAGATTTCCAGGGNCAAAAAAGCCCGTTGGCTTCCGGCTATATTGCCAGCTTGGCCAGCTTTGCAAAAGAAAATCCCNAAACGCTTCAGTTTCTACCGACGTCCACTGAACCGGTCCGCCGGTTTTCATATCGATTTNGCGCGACAAGAAATTCGCCACCATANTTNAAA]


>consensus_6959#0 GAATCGGCGAGGCNTTACTGGGGCCGGCTTGAGTACGACACGCGCTGGGCGAACCGAACA AAGGGCGCGACCTGTGGTACAGTGTGATGGCCAGCTCCGATAATTCGTCCCGTGTCGGAC TGTGGATTGAGTTTATCGAAATGGAAGCAAAACGAGGCCCCGAAGCAGCGCGTAAACTGT ACCGCAAATCCATTACCACCGCTGGGCTGGATGATCCCGAAACGCTGGCTGCCGCTTGGT TGCGATTCGGAGCGGTGCCAACGGTTCGCTGGAGCAGCTGATAAGCTGCCAGGAGCTGTG CAATGCTACGATCGAGAAGTACTACAAGACCATTTCCAAAAATGGTCCGTCAAATCGTGC AAACGAAGGGCAAGCGTTCAGAAGCGACCGGAACAACCGACACAAGGATTCGGACGCATC GGTCGCGAAAAGACAGGCCTCTTCCATGGACGGAGCCGGCGGTTCACCACCGGGGGAAGA AAAAAAGTGAAACGAACCAACGATAATCTGTCCGATACGGTGGGAGAACGGCAGGAAGAG TTTAAAACACCGGCGCATTCCAACCCTCCATAGCAGGCTCCAAAAATCATGACCTCAGCA AAACCGGAGCCATCCAAGAGCCGAAACCGTAATCGACATCGATAGCGAAAGCGACGCGAA AGCTGGCGGCGACCAAAGCCGACAGGTGTTCGTCAGCGAATCTTAGCTTTGAGGGTAACG GAAACAGATATCCGCGAGGATTTTCCCCGACTAGACGATCGAATCGAATAGAAACTGGTC CGCCTTCGCAGATTTCCAGGGNCAAAAAAGCCCGTTGGCTTCCGGCTATATTGCCAGCTT GGCCAGCTTTGCAAAAGAAAATCCCNAAACGCTTCAGTTTCTACCGACGTCCACTGAACC GGTCCGCCGGTTTTCATATCGATTTNGCGCGACAAGAAATTCGCCACCATANTTNAAA



consensusID : consensus_6959#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 935
fasta sequence
                              [GCAGGTTAATNGCGAAAGCGACGCGAAACGCTNGCGGTGACAAATTCGACNGGTGTTCGTCAGCAACTTAGCTTTGAGGTAACGGANACNGATATCCGCGAGATTTTCCCCGACCTACGATCGAATCTGATAGAACTGGTCTGCCTCGAGTTCGGGCAAAAGCCGTGGCTATCGGCGTATATTCAGACTGTGGCCAGTGCGAGAAGAAGTCCCGCAAAGCGCTCCANACATTCTGACCCGACGGTCCCACTGGCAACGGTCGGGCGGGTAATTCCATTTCTTGNACANAGTTAGNCCACGCGGANAAAGGAGCAANGTCGTGCACAATCCANGTTCCAACANGGTTTATCATTCCNCGTCGTGNTTCCGGCATATACGTGAAACCCGGNGTAACCCACAACAAGCGTTGGTTTTGCCAATTCCCCAACACAGTGGGGGCTCAANCCGGACGTGTCCAAAATATCATTGGAGTGAGGACCAACGGACANNGGACAAACATTNGAANANACACGGNTNCGAATTNGGTATCTATTTGAAAANACCCNCANGNATTACCGACGGAGGTTTCNAGATACCACAAAGGGGGGACGNAGCTTTAGAANCNGCAGACATCTCTCNCCAGTGGATNGGTGACTCTANACCCCCGTGNCGACCGTTGGGTCGCANACCAAAAANACCTTCANACAAAAGAGGTGGGGTCGCCTANACGAAGCGANNAACACCCACTGTTGTGGCAGAGGTAACCAGGNGAACAAACAACCCNGTGAGACAACANCGGTATTCACCGGGTACCCAACCACAACAACAGCANATGGTTTGGAGTTNACCTCTTGTGAAAACGCACANTGTGTGGCNCTATCACANCCAAGACATGCGTTTTCAACANTAGTCAAATGGGGCATTTCACCCNNGACACTCCCAACNTTGCGGTAGGG]

[+] EMBL AL696046             [GCAGGTTAATNGCGAAAGCGACGCGAAACGCTNGCGGTGACAAATTCGACNGGTGTTCGTCAGCAACTTAGCTTTGAGGTAACGGANACNGATATCCGCGAGATTTTCCCCGACCTACGATCGAATCTGATAGAACTGGTCTGCCTCGAGTTCGGGCAAAAGCCGTGGCTATCGGCGTATATTCAGACTGTGGCCAGTGCGAGAAGAAGTCCCGCAAAGCGCTCCANACATTCTGACCCGACGGTCCCACTGGCAACGGTCGGGCGGGTAATTCCATTTCTTGNACANAGTTAGNCCACGCGGANAAAGGAGCAANGTCGTGCACAATCCANGTTCCAACANGGTTTATCATTCCNCGTCGTGNTTCCGGCATATACGTGAAACCCGGNGTAACCCACAACAAGCGTTGGTTTTGCCAATTCCCCAACACAGTGGGGGCTCAANCCGGACGTGTCCAAAATATCATTGGAGTGAGGACCAACGGACANNGGACAAACATTNGAANANACACGGNTNCGAATTNGGTATCTATTTGAAAANACCCNCANGNATTACCGACGGAGGTTTCNAGATACCACAAAGGGGGGACGNAGCTTTAGAANCNGCAGACATCTCTCNCCAGTGGATNGGTGACTCTANACCCCCGTGNCGACCGTTGGGTCGCANACCAAAAANACCTTCANACAAAAGAGGTGGGGTCGCCTANACGAAGCGANNAACACCCACTGTTGTGGCAGAGGTAACCAGGNGAACAAACAACCCNGTGAGACAACANCGGTATTCACCGGGTACCCAACCACAACAACAGCANATGGTTTGGAGTTNACCTCTTGTGAAAACGCACANTGTGTGGCNCTATCACANCCAAGACATGCGTTTTCAACANTAGTCAAATGGGGCATTTCACCCNNGACACTCCCAACNTTGCGGTAGGG]


>consensus_6959#1 GCAGGTTAATNGCGAAAGCGACGCGAAACGCTNGCGGTGACAAATTCGACNGGTGTTCGT CAGCAACTTAGCTTTGAGGTAACGGANACNGATATCCGCGAGATTTTCCCCGACCTACGA TCGAATCTGATAGAACTGGTCTGCCTCGAGTTCGGGCAAAAGCCGTGGCTATCGGCGTAT ATTCAGACTGTGGCCAGTGCGAGAAGAAGTCCCGCAAAGCGCTCCANACATTCTGACCCG ACGGTCCCACTGGCAACGGTCGGGCGGGTAATTCCATTTCTTGNACANAGTTAGNCCACG CGGANAAAGGAGCAANGTCGTGCACAATCCANGTTCCAACANGGTTTATCATTCCNCGTC GTGNTTCCGGCATATACGTGAAACCCGGNGTAACCCACAACAAGCGTTGGTTTTGCCAAT TCCCCAACACAGTGGGGGCTCAANCCGGACGTGTCCAAAATATCATTGGAGTGAGGACCA ACGGACANNGGACAAACATTNGAANANACACGGNTNCGAATTNGGTATCTATTTGAAAAN ACCCNCANGNATTACCGACGGAGGTTTCNAGATACCACAAAGGGGGGACGNAGCTTTAGA ANCNGCAGACATCTCTCNCCAGTGGATNGGTGACTCTANACCCCCGTGNCGACCGTTGGG TCGCANACCAAAAANACCTTCANACAAAAGAGGTGGGGTCGCCTANACGAAGCGANNAAC ACCCACTGTTGTGGCAGAGGTAACCAGGNGAACAAACAACCCNGTGAGACAACANCGGTA TTCACCGGGTACCCAACCACAACAACAGCANATGGTTTGGAGTTNACCTCTTGTGAAAAC GCACANTGTGTGGCNCTATCACANCCAAGACATGCGTTTTCAACANTAGTCAAATGGGGC ATTTCACCCNNGACACTCCCAACNTTGCGGTAGGG



consensusID : consensus_6959#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 889
fasta sequence
                              [CCACCCCTCCATAGCAGCTCCAAAAATCATGACCTCAGCAAACAGGAGCCATCCAAACCGCAAACCGTAATCGACATCGATAGCGAAAGCGACGCGAAAGCTGGCGGCGACCAAAGCCGACAGGTGTTCGTCAGCAATCTTAGCTTTGAGGTAACGGAAACAGACATCCGCGAGATTTTCCCCGACCTAGCGATCGAATCGATAGAACTGGTCGCCTCGAGTTCGGGCAAAAGCCGTGGCTTCGGCTATATGCAGCTGGCCAGTGCAGAAGAAGTCCCGAAAGCGCTCAGCTTCGACCGACGTCCACTGAACGGTCGGCCGGTATTCATTTCGAACGTAGCACGCGACAAGACAACTCGTCCACATCAGTTCAAGTACTCGTCGTCGTTCGAACCGAACAAACTGTTCATCAAAGGGCTACCGTTCAATTTGGGGCAAGAGGAACTGCGGCGGTTGTTTGAGCCGTTCGGGTCGATCAAGGACATACGCATCGTGTGCTTCCGGAGTGGCAAATCGAAGGGCCTAGCGTACCTGGAGTACGAAACGGAAACGTCCGCCAAAAATGCTGTCCTGAAGATGGATCAGCACGTGATTGATGGTTTCACGATCACTGTCGCCATCTCGTCACCGCCGCCCAAGAAGAATCCAACCGCAACGGAACCAACCCTATCGGTGGGGGATAGTGGCGGCTCCAGCTCTAGTTTGGGCTCCGGGAAGAAGCTGCTGGGCAAATGGGACGTAAAACAGAAACTATCGCCAATGATTCCAACCGCCGTCTTGAANANAAGCGCAGCGGCAGCCTCGGAGGAGAAGCCGAAATCGAATGACGATTTTCGTAAATTATTGCTTAAGTAACTAGCTCATGTGTAGGATAGTGCTGGCTAGCACA]

[+] EMBL BX626119             [CCACCCCTCCATAGCAGCTCCAAAAATCATGACCTCAGCAAACAGGAGCCATCCAAACCGCAAACCGTAATCGACATCGATAGCGAAAGCGACGCGAAAGCTGGCGGCGACCAAAGCCGACAGGTGTTCGTCAGCAATCTTAGCTTTGAGGTAACGGAAACAGACATCCGCGAGATTTTCCCCGACCTAGCGATCGAATCGATAGAACTGGTCGCCTCGAGTTCGGGCAAAAGCCGTGGCTTCGGCTATATGCAGCTGGCCAGTGCAGAAGAAGTCCCGAAAGCGCTCAGCTTCGACCGACGTCCACTGAACGGTCGGCCGGTATTCATTTCGAACGTAGCACGCGACAAGACAACTCGTCCACATCAGTTCAAGTACTCGTCGTCGTTCGAACCGAACAAACTGTTCATCAAAGGGCTACCGTTCAATTTGGGGCAAGAGGAACTGCGGCGGTTGTTTGAGCCGTTCGGGTCGATCAAGGACATACGCATCGTGTGCTTCCGGAGTGGCAAATCGAAGGGCCTAGCGTACCTGGAGTACGAAACGGAAACGTCCGCCAAAAATGCTGTCCTGAAGATGGATCAGCACGTGATTGATGGTTTCACGATCACTGTCGCCATCTCGTCACCGCCGCCCAAGAAGAATCCAACCGCAACGGAACCAACCTTATCGGTGGGGGATAGTGGCGGCTCCAGCTCTAGCTTGGGCTCCGGGAAGAAGCTGCTGGGCAAATGGGACGTAAAACAGAAATTATCGCCAATGATTCCAACCGCCGTCTTGAANANAAGCGCAG                                                                                                ]
[+] EMBL BX618150             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAATCGAAGGGCCTAGCGTACCTGGAGTACGAAACGGAAACGTCCGCCAAAAATGCTGTCCTGAAGATGGATCAGCACGTGATTGATGGTTTCACGATCACTGTCGCCATCTCGTCACCGCCGCCCAAGAAGAATCCAACCGCAGCGGAACCAACCCTATCGGTGGGGGATAGTGGCGGCTCCAGCTCTAGTTTGGGCTCCGGGAAGAAGCTGCTGGGCAAATGGGACGTAAAACAGAAACTATCGCCAATGATTCCCACCG                                                                                                                     ]
[+] EMBL AGA282859            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAACCCTATCGGTGGGGGATAGTGGCGGCTCCAGCTCTAGTTTGGGCTCCGGGAAGAAGCTGCTGGGCAAATGGGACGTAAAACAGAAACTATCGCCAATGATTCCAACCGCCGTCTTGAAGAGAAGCGCAGCGGCAGCCTCGGAGGAGAAGCCGAAATCGAATGACGATTTTCGTAAATTATTGCTTAAGTAACTAGCTCATGTGTAGGATAGTGCTGGCTAGCACA]


>consensus_6959#2 CCACCCCTCCATAGCAGCTCCAAAAATCATGACCTCAGCAAACAGGAGCCATCCAAACCG CAAACCGTAATCGACATCGATAGCGAAAGCGACGCGAAAGCTGGCGGCGACCAAAGCCGA CAGGTGTTCGTCAGCAATCTTAGCTTTGAGGTAACGGAAACAGACATCCGCGAGATTTTC CCCGACCTAGCGATCGAATCGATAGAACTGGTCGCCTCGAGTTCGGGCAAAAGCCGTGGC TTCGGCTATATGCAGCTGGCCAGTGCAGAAGAAGTCCCGAAAGCGCTCAGCTTCGACCGA CGTCCACTGAACGGTCGGCCGGTATTCATTTCGAACGTAGCACGCGACAAGACAACTCGT CCACATCAGTTCAAGTACTCGTCGTCGTTCGAACCGAACAAACTGTTCATCAAAGGGCTA CCGTTCAATTTGGGGCAAGAGGAACTGCGGCGGTTGTTTGAGCCGTTCGGGTCGATCAAG GACATACGCATCGTGTGCTTCCGGAGTGGCAAATCGAAGGGCCTAGCGTACCTGGAGTAC GAAACGGAAACGTCCGCCAAAAATGCTGTCCTGAAGATGGATCAGCACGTGATTGATGGT TTCACGATCACTGTCGCCATCTCGTCACCGCCGCCCAAGAAGAATCCAACCGCAACGGAA CCAACCCTATCGGTGGGGGATAGTGGCGGCTCCAGCTCTAGTTTGGGCTCCGGGAAGAAG CTGCTGGGCAAATGGGACGTAAAACAGAAACTATCGCCAATGATTCCAACCGCCGTCTTG AANANAAGCGCAGCGGCAGCCTCGGAGGAGAAGCCGAAATCGAATGACGATTTTCGTAAA TTATTGCTTAAGTAACTAGCTCATGTGTAGGATAGTGCTGGCTAGCACA



consensusID : consensus_6959#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 709
fasta sequence
                              [TCGCCCGAGGTTACTTTGAGGTACGGAAACAGATATCGCGAGATTTTCCCCGACCTAGCGATCGAATCGATAGAACTGGTCGCCTCGAGTTCGGGCAAAAGCCGTGGCTTCGGCTATATGCAGCTGGCCAGCGCAGAAGAAGTCCCGAAAGCGCTCAGCTTCGACCGACGTCCACTGAACGGTCGGCCGGTATTCATATCGAATGTAGCACGCGACAAGACAACTCGCCCACATCAGTTCAAGTACTCGTCGTCGTTCGAACCGAACAAACTGTTCATCAAAGGGCTACCGTTCAATTTGGGGCAAGAGGAACTGCGGCGGTTGTTTGAGCCGTTCGGGTCGATCAAGGACATACGCACTCGTGTGCTTCCGGAGTGGCAACATCGAAGGGCCTAGCGTACCTGGAGTACGAAACGGAAACGTCCGCAAAAATGCTGTCCTGAAGATGGATCAGCACGTGATTGATGGTTTCACGATCACTGTCGCCATCTCGTCACCGCGCCAAGAAGAATCCAACCGCAACGGAACCAACCCTATCTGTGGGGGATAGTGGCGGCCCCAGCTCTAGCTTGGGCTCCGGGAAGAAGCTGCTGGGCAAATGGGACCGTAAAACAGAACNCTACTCGCCAATGATTCCAACCGCTGTTTTCACAGAGAAGCGCACGCGGCAGCTCGGAGGAGAAGCCGAAATCGCCTGACGATTTCGTAA]

[+] EMBL AL693061             [TCGCCCGAGGTTACTTTGAGGTACGGAAACAGATATCGCGAGATTTTCCCCGACCTAGCGATCGAATCGATAGAACTGGTCGCCTCGAGTTCGGGCAAAAGCCGTGGCTTCGGCTATATGCAGCTGGCCAGCGCAGAAGAAGTCCCGAAAGCGCTCAGCTTCGACCGACGTCCACTGAACGGTCGGCCGGTATTCATATCGAATGTAGCACGCGACAAGACAACTCGCCCACATCAGTTCAAGTACTCGTCGTCGTTCGAACCGAACAAACTGTTCATCAAAGGGCTACCGTTCAATTTGGGGCAAGAGGAACTGCGGCGGTTGTTTGAGCCGTTCGGGTCGATCAAGGACATACGCACTCGTGTGCTTCCGGAGTGGCAACATCGAAGGGCCTAGCGTACCTGGAGTACGAAACGGAAACGTCCGCAAAAATGCTGTCCTGAAGATGGATCAGCACGTGATTGATGGTTTCACGATCACTGTCGCCATCTCGTCACCGCGCCAAGAAGAATCCAACCGCAACGGAACCAACCCTATCTGTGGGGGATAGTGGCGGCCCCAGCTCTAGCTTGGGCTCCGGGAAGAAGCTGCTGGGCAAATGGGACCGTAAAACAGAACNCTACTCGCCAATGATTCCAACCGCTGTTTTCACAGAGAAGCGCACGCGGCAGCTCGGAGGAGAAGCCGAAATCGCCTGACGATTTCGTAA]


>consensus_6959#3 TCGCCCGAGGTTACTTTGAGGTACGGAAACAGATATCGCGAGATTTTCCCCGACCTAGCG ATCGAATCGATAGAACTGGTCGCCTCGAGTTCGGGCAAAAGCCGTGGCTTCGGCTATATG CAGCTGGCCAGCGCAGAAGAAGTCCCGAAAGCGCTCAGCTTCGACCGACGTCCACTGAAC GGTCGGCCGGTATTCATATCGAATGTAGCACGCGACAAGACAACTCGCCCACATCAGTTC AAGTACTCGTCGTCGTTCGAACCGAACAAACTGTTCATCAAAGGGCTACCGTTCAATTTG GGGCAAGAGGAACTGCGGCGGTTGTTTGAGCCGTTCGGGTCGATCAAGGACATACGCACT CGTGTGCTTCCGGAGTGGCAACATCGAAGGGCCTAGCGTACCTGGAGTACGAAACGGAAA CGTCCGCAAAAATGCTGTCCTGAAGATGGATCAGCACGTGATTGATGGTTTCACGATCAC TGTCGCCATCTCGTCACCGCGCCAAGAAGAATCCAACCGCAACGGAACCAACCCTATCTG TGGGGGATAGTGGCGGCCCCAGCTCTAGCTTGGGCTCCGGGAAGAAGCTGCTGGGCAAAT GGGACCGTAAAACAGAACNCTACTCGCCAATGATTCCAACCGCTGTTTTCACAGAGAAGC GCACGCGGCAGCTCGGAGGAGAAGCCGAAATCGCCTGACGATTTCGTAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6959#2      ------CCACCCCTCCATAGCAGCTCCAAAAATCATGACCTCAGCAAACAGGAGCCATCC 54
consensus_6959#3      ------------------------------------------------------------
consensus_6959#0      GAATCGGCGAGGCNTTACTGGGGCCGGCTTGAGTACGACACGCGCTGG-GCGAACCGAAC 59
consensus_6959#1      ------------------------------------------------------------
                                                                                  

consensus_6959#2      AAACCGCAAACCGTAATCGACATCGATAGCGAAAGCGACGCGAAAGCTGGCGGCGACCAA 114
consensus_6959#3      ------------------------------------------------------------
consensus_6959#0      AAAGGGCGCGACCTGTGGTACAGTGTGATGGCCAGCTCCGATAATTCGTCCCGTGTCGGA 119
consensus_6959#1      -----------------GCAGGTTAATNGCGAAAGCGACGCGAAACGCTNGCGGTGACAA 43
                                                                                  

consensus_6959#2      AGCCGACAGGTGTTCGTCAGCA---------ATCTTAGCTTTGAGGTAACGGAAACAGAC 165
consensus_6959#3      -------------TCGCCCGAG---------GTT---ACTTTGAGGTA-CGGAAACAGAT 34
consensus_6959#0      CTGTGGATTGAGTTTATCGAAATGGAAGCAAAACGAGGCCCCGAAGCAGCGCGTAAACTG 179
consensus_6959#1      ATTCGACNGGTGTTCGTCAGCA----------ACTTAGCTTTGAGGTAACGGANACNGAT 93
                                   *   *                    *   ** * * **   *     

consensus_6959#2      ATCCGCGAG---ATTTTCCCCGACCTAGCGATCGAATCGATAGAACTGGTCGCC--TCGA 220
consensus_6959#3      ATC-GCGAG---ATTTTCCCCGACCTAGCGATCGAATCGATAGAACTGGTCGCC--TCGA 88
consensus_6959#0      TACCGCAAATCCATTACCACCGCTGGGCTGGATGATCCCGAAACGCTGGCTGCCGCTTGG 239
consensus_6959#1      ATCCGCGAG---ATTTTCCCCGACCTACGATCGAATCTGATAGAACTGGTCTGC-CTCGA 149
                        * ** *    ***  * ***            *      *   ****    *  * * 

consensus_6959#2      GTTCGGGCAAAAGCCGTGGCTTCGGCTATATG---CAGCTG--GCCAGTGC-AGAAGAAG 274
consensus_6959#3      GTTCGGGCAAAAGCCGTGGCTTCGGCTATATG---CAGCTG--GCCAGCGC-AGAAGAAG 142
consensus_6959#0      TTGCGATTCGGAGCGGTGCCAACGGTTCGCTGGAGCAGCTG--ATAAGCTG-CCAGGAGC 296
consensus_6959#1      GTTCGGGCAAAAGCCGTGGCTATCGGCGTATATTCAGACTGTGGCCAGTGCGAGAAGAAG 209
                       * **      *** *** *    *     *       ***     **      * **  

consensus_6959#2      TCCCG-AAAGC---GCTCA-GCTTCGACCG-ACG--TCCACTG--AACGGTCGGCCGGTA 324
consensus_6959#3      TCCCG-AAAGC---GCTCA-GCTTCGACCG-ACG--TCCACTG--AACGGTCGGCCGGTA 192
consensus_6959#0      TGTGC-AATGCTACGATCG-AGAAGTACTACAAG--ACCATTTCCAAAAATGGTCCGTCA 352
consensus_6959#1      TCCCGCAAAGCGCTCCANACATTCTGACCCGACGGTCCCACTGGCAACGGTCGGGCGG-- 267
                      *     ** **               **   * *   *** *   **   * *  **   

consensus_6959#2      TTCATTTCGAACGTAG--CACGCGACAAGA--CAACTCGTCCACATCAGTTCAAGTACTC 380
consensus_6959#3      TTCATATCGAATGTAG--CACGCGACAAGA--CAACTCGCCCACATCAGTTCAAGTACTC 248
consensus_6959#0      AATCGTGCAAACGAAGGGCAAGCGTTCAGAAGCGACCGGAACA-ACCGACACAAGGATTC 411
consensus_6959#1      GTAATTCCATTTCTTG--NACANAGTTAGN--CCACGCGGANAAA--GGAGCAANGTCGT 321
                             *       *   *       **   * **  *   * *      ***      

consensus_6959#2      GTCGTCGTTCGAACCGAACAAACTG------TTCATCAAAGGG--CTACCGTTCAAT-TT 431
consensus_6959#3      GTCGTCGTTCGAACCGAACAAACTG------TTCATCAAAGGG--CTACCGTTCAAT-TT 299
consensus_6959#0      GGACGCATCGGTCGCGAAAAGACAGGCCTCTTCCATGGACGGAGCCGGCGGTTCACCACC 471
consensus_6959#1      GCACAATCCANGTTCCAACANGGTTTATCATTCCNCGTCGTGNTTCCGGCATATACGTGA 381
                      *             * ** *           * *       *   *     *  *     

consensus_6959#2      GGGGCAAGAGGAACTGCGGCGGTTGTTTGAGCCGTT--CGGGTCGATCAAGGACATACGC 489
consensus_6959#3      GGGGCAAGAGGAACTGCGGCGGTTGTTTGAGCCGTT--CGGGTCGATCAAGGACATACGC 357
consensus_6959#0      GGGGGAAGAAAAAAAGTGAAACGAACCAACGATAAT--CTGTCCGATACGGTGGGAGAAC 529
consensus_6959#1      AACCCGGNGTAACCCACAACAAGCGTTGGTTTTGCCAATTCCCCAACACAGTGGGGGCTC 441
                                 *                               * *    *        *

consensus_6959#2      A--TCGTGTGCTTCCGGAGTGGCAA-ATCGAAGGGCCTAGCGTACCTGGAGTAC-----G 541
consensus_6959#3      A-CTCGTGTGCTTCCGGAGTGGCAACATCGAAGGGCCTAGCGTACCTGGAGTAC-----G 411
consensus_6959#0      G-GCAGGAAGAGTTTAAAACACCGGCGCATTCCAACCCTCCATAGCAGGCTCCA-----A 583
consensus_6959#1      AANCCGGACGTGTCCAAAATATCATTGGAGTGAGGACCAACGGACANNGGACAAACATTN 501
                           *   *  *    *    *             *   *  *    *           

consensus_6959#2      AAACGGAAACGTCCGCCAAA--AATG-CTGTCCTGAAGATGGATCAGCA--CGTGATTGA 596
consensus_6959#3      AAACGGAAACGTCCGC-AAA--AATG-CTGTCCTGAAGATGGATCAGCA--CGTGATTGA 465
consensus_6959#0      AAATCATGACCTCAGCAAAACCGGAG-CCATCCAAGAGCCGAAACCGTAATCGACATCGA 642
consensus_6959#1      GAANANACACGGNTNCGAATTNGGTATCTATTTGAAAANACCCNCANGNATTACCGACGG 561
                       **     **     * **        *  *     *       *             * 

consensus_6959#2      TGGTTTCACGAT--CACTGTCGCCATCTCGTCACCGCCGCCCAAGAAGAATCCAACCGCA 654
consensus_6959#3      TGGTTTCACGAT--CACTGTCGCCATCTCGTCACCGCG--CCAAGAAGAATCCAACCGCA 521
consensus_6959#0      TAGCGAAAGCGA--CGCGAAAGCTGGCG-GCGACCAAAG-CCGACAGGTGTTCGTCAGCG 698
consensus_6959#1      AGGTTTCNAGATACCACAAAGGGGGGACGNAGCTTTAGAANCNGCAGACATCTCTCNCCA 621
                        *           * *    *                   *   *    *    *  * 

consensus_6959#2      ACGGAAC--CAACCCTAT----CGGTGGGGGATAGTGG--CGGCTCC-AGCTCTAGTTTG 705
consensus_6959#3      ACGGAAC--CAACCCTAT----CTGTGGGGGATAGTGG--CGGCCCC-AGCTCTAGCTTG 572
consensus_6959#0      A--ATCT--TAGCTTTGA----GGGTAACGGAAACAGA--TATCCGCGAGGATTTTCCCC 748
consensus_6959#1      GTGGATNGGTGACTCTANACCCCCGTGNCGACCGTTGGGTCGCANACCAAAAANACCTTC 681
                                  *  *        **   *      *         * *           

consensus_6959#2      GGCTCCGGGA--AGAAGCTGCTGGGC--AAATGGGAC-GTAAAACAGAA-ACTA-TCGCC 758
consensus_6959#3      GGCTCCGGGA--AGAAGCTGCTGGGC--AAATGGGACCGTAAAACAGAACNCTACTCGCC 628
consensus_6959#0      GACTAGACGA--TCGAATCGAATAGA--AACTGGTCCGCCTTCGCAGATTTCCA-GGGNC 803
consensus_6959#1      ANACAAAAGAGGTGGGGTCGCCTANACGAAGCGANNAACACCCACTGTTGTGGCAGAGGT 741
                              **         *        **  *           * *          *  

consensus_6959#2      AATGATTCCAACCGCCGTCTTGA-ANANAAGCGCA-GCGGCAGCCTCGGAGGAGAAG--C 814
consensus_6959#3      AATGATTCCAACCGCTGTTTTCACAGAGAAGCGCACGCGGCAGC-TCGGAGGAGAAG--C 685
consensus_6959#0      AAAAAAGCCCGTTGGCTTCCGGCTATATTGCCAGCTTGGCCAGCTTTGCAAAAGAAAATC 863
consensus_6959#1      AACCAGGNGAACAAACAACCCNGTGAGACAACANCGGTATTCAC--CGGGTACCCAACCA 799
                      **  *                          *           *   *       *    

consensus_6959#2      CGAAATCGAATGACGATTTTCGTAAATTATTGCTTAAGTAACTAGCTCATGTGTAGGATA 874
consensus_6959#3      CGAAATCGCCTGACGATTT-CGTAA----------------------------------- 709
consensus_6959#0      CCNAAACGCTT--CAGTTTCTACCGACGTCCACTGAACCGGTCCGCCGGTTTTCATATCG 921
consensus_6959#1      CAACAACAGCANATGGTTT--GGAGTTNACCTCTTGTGAAAACGCACANTGTGTGGCNCT 857
                      *   * *         ***                                         

consensus_6959#2      GTGCTGGCTAGCACA--------------------------------------------- 889
consensus_6959#3      ------------------------------------------------------------
consensus_6959#0      ATTTNGCGCGACAAGAAATTCGCCACCATANTTNAAA----------------------- 958
consensus_6959#1      ATCACANCCAAGACATGCGTTTTCAACANTAGTCAAATGGGGCATTTCACCCNNGACACT 917
                                                                                  

consensus_6959#2      ------------------
consensus_6959#3      ------------------
consensus_6959#0      ------------------
consensus_6959#1      CCCAACNTTGCGGTAGGG 935
                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)