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Anopheles gambiae
cluster # 6990 cluster # 6990       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6990#0 length = 1380 sequences # 2  
consensus_6990#1 length = 755 sequences # 1  
consensus_6990#2 length = 591 sequences # 1  
consensus_6990#3 length = 541 sequences # 1  
consensus_6990#4 length = 159 sequences # 1  

consensusID : consensus_6990#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1380
fasta sequence
                              [GGGCATTTTATTTATCATTGACTTCTATATCACTTCGTAAATCTATCTCTCCTTTATACAAATAAATCCTTGCAGCACCGGAAATACGCGGACACACCTACCCCTACACAAACAAAAGCCCTCTCAAAGCTTCTGTTTGCCCGCCGTCGGTAGCACGGTGGCCACGTTCGATAGCAAACTCTCCTCGATCGCCTTGATACTACCGGGCGACGGTGTCGGTGCCCCAATGTCGGCCACAATATTTGGTACAAGGTATTCGCCGCTGCCCTTGTCCTCCCTAAACTGCCAGTGCTTTTTGTTCAGCAGAAACAGTGCCATCAGCAGGGGCAGATGGAGCAGCGAGAAGCGGAACAGCTTGCGCGAGCTTTTACTGTCCGCCTTCTGATGGAAATCGTACGCCAGGTAGGCAAAGTAAGCATTCAGCGGAAGGGATTCCAGCGCGAACCAAACGTTCGTCACATCCAGCGCGGGGGCGAGCAGCGACAGACCGGCAATGAACCCGGTATGCCGCA-GGAAACGCGCGTACAGAGGGCCGGGTGTGAGTTGGCCATCATTTTGTAGCCGGCCTTAAGGTACTCCGGCCGGATGTTCCACGACAGCGCGTTAAAGTGAGGAAACTGCCAGCAGTACAGCAGCCCGGCCAGGATCCATGCGCCGGCGCCCAGGTCGCCGCCGGTGCAGGCAGCCCAGCCCATCAGCGGCGGAATGGCGCCGACGACCGAGCCGACCCACGTATTCAGAATACTGTAGCGTTTCATTGGGGGTGTAGATGCTGGTGTTTGTTATGAGATTGGCGGCGCCCAGTGCGGCCGTCATTTCGTTCACGCCGTAGTACAGCATGCTGCAGCCGATCGTGCTGGCACCGAGCGCAAAGCCGACCGCGTGCAGGCGTGAGAAATGTCCTTTTACGAGCACTCGGTTGCGCGTGCGGGGCATTTGTGCGTCGAACGACGTTTCAATGACCTGGTTGATGGAGTTGGCCGCACCCGAGACGAGCGTCGTGCCGGCCGAGCAGAGCAGAAACGTCCCCAGCTCGAACGAACCCGGTGCCATCGCATATCCGGCCATCGCGGTCATCACCACCAGGGACGTCAATCGGATCTTTGATAACATAAGATAATGGTAAATCAACCGACTGAGCCCGGGAAGCGACGTCACGGAGGCAACCACTTCCTTCGTGCCATCCTCACCGCTCTTGCGCAGCGTTCCGACCGATTTACTAATTTCACTAACTATGGCTTTCGGTCCGGCTTGACGCACGAGGTCCCACCATAGCCGCCCGTTTGCGAGGAATTTATGCATTACACTGGGCGGCACAACACTGGGAGCATTTTACGTTGCGTACATGCAACAGAACTCGAGCAGCTCGATGGACGGGTG]

[+] EMBL CNS08ZBX             [GGGCATTTTATTTATCATTGACTTCTATATCACTTCGTAAATCTATCTCTCCTTTATACAAATAAATCCTTGCAGCACCGGAAATACGCGGACACACCTACCCCTACACAAACAAAAGCCCTCTCAAAGCTTCTGTTTGCCCGCCGTCGGTAGCACGGTGGCCACGTTCGATAGCAAACTCTCCTCGATCGCCTTGATACTACCGGGCGACGGTGTCGGTGCCCCAATGTCGGCCACAATATTTGGTACAAGGTATTCGCCGCTGCCCTTGTCCTCCCTAAACTGCCAGTGCTTTTTGTTCAGCAGAAACAGTGCCATCAGCAGGGGCAGATGGAGCAGCGAGAAGCGGAACAGCTTGCGCGAGCTTTTACTGTCCGCCTTCTGATGGAAATCGTACGCCAGGTAGGCAAAGTAAGCATTCAGCGGAAGGGATTCCAGCGCGAACCAAACGTTCGTCACATCCAGCGCGGGGGCGAGCAGCGACAGACCGGCAATGAACCCGGTATGCCGCA GGAAACGCGCGTACAGAGGGCCGGGTGTGAGTTGGCCATCATTTTGTAGCCGGCCTTAAGGTACTCCGGCCGGATGTTCCACGACAGCGCGTTAAAGTGAGGAAACTGCCAGCAGTACAGCAGCCCGGCCAGGATCCATGCGCCGGCGCCCAGGTCGCCGCCGGTGCAGGCAGCCCAGCCCATCAGCGGCGGAATGGCGCCGACGACCGAGCCGACCCACGTATTCAGAATACTGTAGCGTTTCATTGGGGGTGTAGATGCTGGTGTTTGTTATGAGATTGGCGGCGCCCAGTGCGGCCGTCATTTCGTTCACGCCGTAGTACAGCATGCTGCAGCCGATCGTGCTGGCACCGAGCGCAAAGCCGACCGCGTGCAGGCGTGAGAAATGTCCTTTTACGAGCACTCGGTTGCGCGTGCGGGGCATTTGTGCGTCGAACGACGTTTCAATGACCTGGTT                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS08XB0             [                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAAACGTTCGTCACATCCAGCGCGGGGGCGAGCAGCGACAGACCGGCAATGAACCCGGTATGCCGCAGGGAAACGCGCGTACAGAGGGCCGGGTGTGAGTTGGCCATCATTTTGTAGCCGGCCTTAAGGTACTCCGGCCGGATGTTCCACGACAGCGCGTTAAAGTGAGGAAACTGCCAGCAGTACAGCAGCCCGGCCAGGATCCATGCGCCGGCGCCCAGGTCGCCGCCGGTGCAGGCAGCCCAGCCCATCAGCGGCGGAATGGCGCCGACGACCGAGCCGACCCACGTATTCAGAATACTGTAGCGTTTCATT GGGGTGTAGATGCTGGTGTAAAGGATGAGATTGGCGGCGCCCAGTGCGGCCGTCATTTCGTTCACGCCGTAGTACAGCATGCTGCAGCCGATCGTGCTGGCACCGAGCGCAAAGCCGACCGCGTGCAGGCGTGAGAGATGTCCTTTTACGAGCACTCGGTTGCGCGTGCGGGGCATTTGTGCGTCGAACGACGTTTCAATGACCTGGTTGATGGAGTTGGCCGCACCCGAGACGAGCGTCGTGCCGGCCGAGCAGAGCAGAAACGTCCCCAGCTCGAACGAACCCGGTGCCATCGCATATCCGGCCATCGCGGTCATCACCACCAGGGACGTCAATCGGATCTTTGATAACATAAGATAATGGTAAATCAACCGACTGAGCCCGGGAAGCGACGTCACGGAGGCAACCACTTCCTTCGTGCCATCCTCACCGCTCTTGCGCAGCGTTCCGACCGATTTACTAATTTCACTAACTATGGCTTTCGGTCCGGCTTGACGCACGAGGTCCCACCATAGCCGCCCGTTTGCGAGGAATTTATGCATTACACTGGGCGGCACAACACTGGGAGCATTTTACGTTGCGTACATGCAACAGAACTCGAGCAGCTCGATGGACGGGTG]


>consensus_6990#0 GGGCATTTTATTTATCATTGACTTCTATATCACTTCGTAAATCTATCTCTCCTTTATACA AATAAATCCTTGCAGCACCGGAAATACGCGGACACACCTACCCCTACACAAACAAAAGCC CTCTCAAAGCTTCTGTTTGCCCGCCGTCGGTAGCACGGTGGCCACGTTCGATAGCAAACT CTCCTCGATCGCCTTGATACTACCGGGCGACGGTGTCGGTGCCCCAATGTCGGCCACAAT ATTTGGTACAAGGTATTCGCCGCTGCCCTTGTCCTCCCTAAACTGCCAGTGCTTTTTGTT CAGCAGAAACAGTGCCATCAGCAGGGGCAGATGGAGCAGCGAGAAGCGGAACAGCTTGCG CGAGCTTTTACTGTCCGCCTTCTGATGGAAATCGTACGCCAGGTAGGCAAAGTAAGCATT CAGCGGAAGGGATTCCAGCGCGAACCAAACGTTCGTCACATCCAGCGCGGGGGCGAGCAG CGACAGACCGGCAATGAACCCGGTATGCCGCAGGAAACGCGCGTACAGAGGGCCGGGTGT GAGTTGGCCATCATTTTGTAGCCGGCCTTAAGGTACTCCGGCCGGATGTTCCACGACAGC GCGTTAAAGTGAGGAAACTGCCAGCAGTACAGCAGCCCGGCCAGGATCCATGCGCCGGCG CCCAGGTCGCCGCCGGTGCAGGCAGCCCAGCCCATCAGCGGCGGAATGGCGCCGACGACC GAGCCGACCCACGTATTCAGAATACTGTAGCGTTTCATTGGGGGTGTAGATGCTGGTGTT TGTTATGAGATTGGCGGCGCCCAGTGCGGCCGTCATTTCGTTCACGCCGTAGTACAGCAT GCTGCAGCCGATCGTGCTGGCACCGAGCGCAAAGCCGACCGCGTGCAGGCGTGAGAAATG TCCTTTTACGAGCACTCGGTTGCGCGTGCGGGGCATTTGTGCGTCGAACGACGTTTCAAT GACCTGGTTGATGGAGTTGGCCGCACCCGAGACGAGCGTCGTGCCGGCCGAGCAGAGCAG AAACGTCCCCAGCTCGAACGAACCCGGTGCCATCGCATATCCGGCCATCGCGGTCATCAC CACCAGGGACGTCAATCGGATCTTTGATAACATAAGATAATGGTAAATCAACCGACTGAG CCCGGGAAGCGACGTCACGGAGGCAACCACTTCCTTCGTGCCATCCTCACCGCTCTTGCG CAGCGTTCCGACCGATTTACTAATTTCACTAACTATGGCTTTCGGTCCGGCTTGACGCAC GAGGTCCCACCATAGCCGCCCGTTTGCGAGGAATTTATGCATTACACTGGGCGGCACAAC ACTGGGAGCATTTTACGTTGCGTACATGCAACAGAACTCGAGCAGCTCGATGGACGGGTG



consensusID : consensus_6990#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 755
fasta sequence
                              [GTTCCAAATTCACTGGAGAAACGATGGCGAACGTGAACCTAGCGTCGGTGGTGCTCCGCACTGCGCTGCGTGCCAAGATTGGCACCCGCCAGTCCCACGACATGATCACGCAGAAGATCGGCAAGCGGGAGGTGGTCGGACACGGCTGGAACGGTCTGCCGGTGTACGCTGACCGCGTCGACTACCCGATGCCGGCCATCCGCTTCAAGGAAAACACCCGTGATGTCCTGGCTCTGCGCGAGAAGGAGAAGGGTGACTGGAAGAAGATGTCGGTGCAGGAGAAGAAGGCCCTGTACCGGGCCTCGTTCTGCCAGACGTTCGCCGAGATGAAGCACCCGACCGGCGAGTGGAAGGCGTGCCTCGGCGCCGCCCTGATCGCCGCCTCCATGAGCCTGATCGGCATGATGCTGCTGAAGGCGTTCGTGTACGAACCGATCCCGGAAACGTTCGACGAGGAGCACCAGAAGGCCCAGCTGAAGCGTATGCTCGACCTCAACATCAACCCGATCCACGGCGTGTCGTCCAAGTGGGACTACGACAACAACAAGTGGAAGTAAAGCACCGGGGTTTCGCAGGTGTGAAAGTAATTAAATTCCGTGATTATGGTGGTACCCCTCCCTCTCCCCCTTACCCTGGGCGAGTGCTGTGGACGCTTGTTGAGCTAATAAAATATCAGTGAAGCCTCTAGGATACTTCATCTGGTGTACTCGTTAAAAAAAAAAAAACAAAGGCCACATGTGCCCGAGCTGCTGGTT]

[+] EMBL CNS08QTA             [GTTCCAAATTCACTGGAGAAACGATGGCGAACGTGAACCTAGCGTCGGTGGTGCTCCGCACTGCGCTGCGTGCCAAGATTGGCACCCGCCAGTCCCACGACATGATCACGCAGAAGATCGGCAAGCGGGAGGTGGTCGGACACGGCTGGAACGGTCTGCCGGTGTACGCTGACCGCGTCGACTACCCGATGCCGGCCATCCGCTTCAAGGAAAACACCCGTGATGTCCTGGCTCTGCGCGAGAAGGAGAAGGGTGACTGGAAGAAGATGTCGGTGCAGGAGAAGAAGGCCCTGTACCGGGCCTCGTTCTGCCAGACGTTCGCCGAGATGAAGCACCCGACCGGCGAGTGGAAGGCGTGCCTCGGCGCCGCCCTGATCGCCGCCTCCATGAGCCTGATCGGCATGATGCTGCTGAAGGCGTTCGTGTACGAACCGATCCCGGAAACGTTCGACGAGGAGCACCAGAAGGCCCAGCTGAAGCGTATGCTCGACCTCAACATCAACCCGATCCACGGCGTGTCGTCCAAGTGGGACTACGACAACAACAAGTGGAAGTAAAGCACCGGGGTTTCGCAGGTGTGAAAGTAATTAAATTCCGTGATTATGGTGGTACCCCTCCCTCTCCCCCTTACCCTGGGCGAGTGCTGTGGACGCTTGTTGAGCTAATAAAATATCAGTGAAGCCTCTAGGATACTTCATCTGGTGTACTCGTTAAAAAAAAAAAAACAAAGGCCACATGTGCCCGAGCTGCTGGTT]


>consensus_6990#1 GTTCCAAATTCACTGGAGAAACGATGGCGAACGTGAACCTAGCGTCGGTGGTGCTCCGCA CTGCGCTGCGTGCCAAGATTGGCACCCGCCAGTCCCACGACATGATCACGCAGAAGATCG GCAAGCGGGAGGTGGTCGGACACGGCTGGAACGGTCTGCCGGTGTACGCTGACCGCGTCG ACTACCCGATGCCGGCCATCCGCTTCAAGGAAAACACCCGTGATGTCCTGGCTCTGCGCG AGAAGGAGAAGGGTGACTGGAAGAAGATGTCGGTGCAGGAGAAGAAGGCCCTGTACCGGG CCTCGTTCTGCCAGACGTTCGCCGAGATGAAGCACCCGACCGGCGAGTGGAAGGCGTGCC TCGGCGCCGCCCTGATCGCCGCCTCCATGAGCCTGATCGGCATGATGCTGCTGAAGGCGT TCGTGTACGAACCGATCCCGGAAACGTTCGACGAGGAGCACCAGAAGGCCCAGCTGAAGC GTATGCTCGACCTCAACATCAACCCGATCCACGGCGTGTCGTCCAAGTGGGACTACGACA ACAACAAGTGGAAGTAAAGCACCGGGGTTTCGCAGGTGTGAAAGTAATTAAATTCCGTGA TTATGGTGGTACCCCTCCCTCTCCCCCTTACCCTGGGCGAGTGCTGTGGACGCTTGTTGA GCTAATAAAATATCAGTGAAGCCTCTAGGATACTTCATCTGGTGTACTCGTTAAAAAAAA AAAAACAAAGGCCACATGTGCCCGAGCTGCTGGTT



consensusID : consensus_6990#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 591
fasta sequence
                              [CCGCGGACGCGTGGGCCGCAGCAGCGAATCCGCATTGCCAACGAGAAGGCCAGCAAGAACATCACGATGCGTGGCAACGTGCCCAAATCGTCCAAGAACACCGAGGAAAAGTACCCGGTCGGACCGTGGCTGTTGGCCCTGTTCATCTTTGTCGTGTGCGGCTCGGCGATATTCCAGATCATTCAGTCGATTCGCATAGCATAAGAGGAGGTGGAGAAGGAGAAGGGCTAACGAGATCTGCTGCCAGACGCTAACAACAACTACAACAACAACAACACAACCATCGTCTTGATCACAAAGGGAACCAATCGCCGCCCGCCTCCGTTCGTGTACTGTCCCGGAAAATTTTGTTTTCTTTTTTTTTGTGGTGGAGAAAAGCGCATATTGCTTTTCCCACTGTTGTAGTCTTTTTCTTTTGCATTCGTTTCGATTTTCCGCTCCCTCAAGTGTGCTACACAACCCCCTTCCCTCTCTCCTTAATTGTAGCTAAATCGCGGGACAAATCGGATCGAATGAAGTGTAAATGTAACGTTTTTTGCTTTTAAGTGTACGTGTCTCTACGAGGCATCATTTCCAAGACCGCTTGATATA]

[+] EMBL BM606463             [CCGCGGACGCGTGGGCCGCAGCAGCGAATCCGCATTGCCAACGAGAAGGCCAGCAAGAACATCACGATGCGTGGCAACGTGCCCAAATCGTCCAAGAACACCGAGGAAAAGTACCCGGTCGGACCGTGGCTGTTGGCCCTGTTCATCTTTGTCGTGTGCGGCTCGGCGATATTCCAGATCATTCAGTCGATTCGCATAGCATAAGAGGAGGTGGAGAAGGAGAAGGGCTAACGAGATCTGCTGCCAGACGCTAACAACAACTACAACAACAACAACACAACCATCGTCTTGATCACAAAGGGAACCAATCGCCGCCCGCCTCCGTTCGTGTACTGTCCCGGAAAATTTTGTTTTCTTTTTTTTTGTGGTGGAGAAAAGCGCATATTGCTTTTCCCACTGTTGTAGTCTTTTTCTTTTGCATTCGTTTCGATTTTCCGCTCCCTCAAGTGTGCTACACAACCCCCTTCCCTCTCTCCTTAATTGTAGCTAAATCGCGGGACAAATCGGATCGAATGAAGTGTAAATGTAACGTTTTTTGCTTTTAAGTGTACGTGTCTCTACGAGGCATCATTTCCAAGACCGCTTGATATA]


>consensus_6990#2 CCGCGGACGCGTGGGCCGCAGCAGCGAATCCGCATTGCCAACGAGAAGGCCAGCAAGAAC ATCACGATGCGTGGCAACGTGCCCAAATCGTCCAAGAACACCGAGGAAAAGTACCCGGTC GGACCGTGGCTGTTGGCCCTGTTCATCTTTGTCGTGTGCGGCTCGGCGATATTCCAGATC ATTCAGTCGATTCGCATAGCATAAGAGGAGGTGGAGAAGGAGAAGGGCTAACGAGATCTG CTGCCAGACGCTAACAACAACTACAACAACAACAACACAACCATCGTCTTGATCACAAAG GGAACCAATCGCCGCCCGCCTCCGTTCGTGTACTGTCCCGGAAAATTTTGTTTTCTTTTT TTTTGTGGTGGAGAAAAGCGCATATTGCTTTTCCCACTGTTGTAGTCTTTTTCTTTTGCA TTCGTTTCGATTTTCCGCTCCCTCAAGTGTGCTACACAACCCCCTTCCCTCTCTCCTTAA TTGTAGCTAAATCGCGGGACAAATCGGATCGAATGAAGTGTAAATGTAACGTTTTTTGCT TTTAAGTGTACGTGTCTCTACGAGGCATCATTTCCAAGACCGCTTGATATA



consensusID : consensus_6990#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 541
fasta sequence
                              [CCGCCCACGCGTCCGGGAGAAACGATGGCGAACGTGAACCTAGCGTCGGTGGTGCTCCGCACTGCGCTGCGTGCAAAGATTGGCACCCGCCAGTCCCACGACATGATCACGCAGAAGATCGGCAAGCGGGAGGTGGTCGGACACGGCTGGAACGGTCTGCCGGTGTACGCTGACCGCGTCGACTACCCGATGCCGGCCATCCGCTTCAAGGAAAACACCCGTGACGTCCTGGCTCTGCGCGAGAAGGAGAAGGGTGACTGGAAGAAGATGTCGGTGCAGGAGAAGAAGGCCCTGTACCGGGCCTCGTTCTGCCAGACGTTCGCCGAGATGAAGCACCCGACCGGCGAGTGGAAGGCGTGCCTCGGCGCCGCCCTGATCGCCGCCTCCATGAGCCTGATCGGCATGATGCTGCTGAAGGCGTTCGTGTACGAACCGATCCCGGAAACGTTCGACGAGGAGCACCAGAAGGCCCAGCTGAAGCGTATGCTCGACCTCAACATCAACCCGATCCACGGCGTGTCGTCCAAGTGGGACTACGACA]

[+] EMBL BM637087             [CCGCCCACGCGTCCGGGAGAAACGATGGCGAACGTGAACCTAGCGTCGGTGGTGCTCCGCACTGCGCTGCGTGCAAAGATTGGCACCCGCCAGTCCCACGACATGATCACGCAGAAGATCGGCAAGCGGGAGGTGGTCGGACACGGCTGGAACGGTCTGCCGGTGTACGCTGACCGCGTCGACTACCCGATGCCGGCCATCCGCTTCAAGGAAAACACCCGTGACGTCCTGGCTCTGCGCGAGAAGGAGAAGGGTGACTGGAAGAAGATGTCGGTGCAGGAGAAGAAGGCCCTGTACCGGGCCTCGTTCTGCCAGACGTTCGCCGAGATGAAGCACCCGACCGGCGAGTGGAAGGCGTGCCTCGGCGCCGCCCTGATCGCCGCCTCCATGAGCCTGATCGGCATGATGCTGCTGAAGGCGTTCGTGTACGAACCGATCCCGGAAACGTTCGACGAGGAGCACCAGAAGGCCCAGCTGAAGCGTATGCTCGACCTCAACATCAACCCGATCCACGGCGTGTCGTCCAAGTGGGACTACGACA]


>consensus_6990#3 CCGCCCACGCGTCCGGGAGAAACGATGGCGAACGTGAACCTAGCGTCGGTGGTGCTCCGC ACTGCGCTGCGTGCAAAGATTGGCACCCGCCAGTCCCACGACATGATCACGCAGAAGATC GGCAAGCGGGAGGTGGTCGGACACGGCTGGAACGGTCTGCCGGTGTACGCTGACCGCGTC GACTACCCGATGCCGGCCATCCGCTTCAAGGAAAACACCCGTGACGTCCTGGCTCTGCGC GAGAAGGAGAAGGGTGACTGGAAGAAGATGTCGGTGCAGGAGAAGAAGGCCCTGTACCGG GCCTCGTTCTGCCAGACGTTCGCCGAGATGAAGCACCCGACCGGCGAGTGGAAGGCGTGC CTCGGCGCCGCCCTGATCGCCGCCTCCATGAGCCTGATCGGCATGATGCTGCTGAAGGCG TTCGTGTACGAACCGATCCCGGAAACGTTCGACGAGGAGCACCAGAAGGCCCAGCTGAAG CGTATGCTCGACCTCAACATCAACCCGATCCACGGCGTGTCGTCCAAGTGGGACTACGAC A



consensusID : consensus_6990#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 159
fasta sequence
                              [CTCAAACTCGTCCGAAAAGAGAGGCACGCAGAGCGGATTTTTCCTCCACGCATGCCTTCTTGCGGCCCAAAACGAAGATGCGGATTTTCGGATCCGGAAAACCGCGACAAAAGCGCGATTTCGGGTAGGGTTTTTTTTTGCAGTTACGATAAAACCGAG]

[+] EMBL CNS097GT             [CTCAAACTCGTCCGAAAAGAGAGGCACGCAGAGCGGATTTTTCCTCCACGCATGCCTTCTTGCGGCCCAAAACGAAGATGCGGATTTTCGGATCCGGAAAACCGCGACAAAAGCGCGATTTCGGGTAGGGTTTTTTTTTGCAGTTACGATAAAACCGAG]


>consensus_6990#4 CTCAAACTCGTCCGAAAAGAGAGGCACGCAGAGCGGATTTTTCCTCCACGCATGCCTTCT TGCGGCCCAAAACGAAGATGCGGATTTTCGGATCCGGAAAACCGCGACAAAAGCGCGATT TCGGGTAGGGTTTTTTTTTGCAGTTACGATAAAACCGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6990#1      ------------------------------------------------------------
consensus_6990#3      ------------------------------------------------------------
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
consensus_6990#0      GGGCATTTTATTTATCATTGACTTCTATATCACTTCGTAAATCTATCTCTCCTTTATACA 60
                                                                                  

consensus_6990#1      ------------------------------------------------------------
consensus_6990#3      ------------------------------------------------------------
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
consensus_6990#0      AATAAATCCTTGCAGCACCGGAAATACGCGGACACACCTACCCCTACACAAACAAAAGCC 120
                                                                                  

consensus_6990#1      ------------------------------------------------------------
consensus_6990#3      ------------------------------------------------------------
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
consensus_6990#0      CTCTCAAAGCTTCTGTTTGCCCGCCGTCGGTAGCACGGTGGCCACGTTCGATAGCAAACT 180
                                                                                  

consensus_6990#1      ------------------------------------------------------------
consensus_6990#3      ------------------------------------------------------------
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
consensus_6990#0      CTCCTCGATCGCCTTGATACTACCGGGCGACGGTGTCGGTGCCCCAATGTCGGCCACAAT 240
                                                                                  

consensus_6990#1      ------------------------------------------------------------
consensus_6990#3      ------------------------------------------------------------
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
consensus_6990#0      ATTTGGTACAAGGTATTCGCCGCTGCCCTTGTCCTCCCTAAACTGCCAGTGCTTTTTGTT 300
                                                                                  

consensus_6990#1      ------------------------------------------------------------
consensus_6990#3      ------------------------------------------------------------
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
consensus_6990#0      CAGCAGAAACAGTGCCATCAGCAGGGGCAGATGGAGCAGCGAGAAGCGGAACAGCTTGCG 360
                                                                                  

consensus_6990#1      -----GTTCCAAATTCACTGGAGAAACGATGGCGAACGTGAACCTAGCGTCGGTGGTGCT 55
consensus_6990#3      ----CCGCCCACGCGTCCGGGAGAAACGATGGCGAACGTGAACCTAGCGTCGGTGGTGCT 56
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      ----------CCGCGGACGCGTGGGCCGCAGCAGCGAATCCGCATTGCCAACGAGAAGGC 50
consensus_6990#0      CGAGCTTTTACTGTCCGCCTTCTGATGGAAATCGTACGCCAGGTAGGCAAAGTAAGCATT 420
                                                                                  

consensus_6990#1      CCGCACTGCGCTGCGTGCCAAGATTGGCACCCGCCAGTCCCACGACATGATCACGCAGAA 115
consensus_6990#3      CCGCACTGCGCTGCGTGCAAAGATTGGCACCCGCCAGTCCCACGACATGATCACGCAGAA 116
consensus_6990#4      ----------------------------------------CTCAAACTCGTC-CG-AAAA 18
consensus_6990#2      CAGCAAGAACATCACGATGCGTGGCAACGTGCCCAAATCGTCCAAGAACACCGAGGAAAA 110
consensus_6990#0      CAGCGGAAGGGATTCCAGCGCGAACCAAACGTTCGTCACATCCAGCGCGGGGGCGAGCAG 480
                                                                *           *   * 

consensus_6990#1      G-ATCGGCAAGCG--GGAGGTGGTCGGACACGGCTGGAACGG-TCTGCCGGTGTACGCTG 171
consensus_6990#3      G-ATCGGCAAGCG--GGAGGTGGTCGGACACGGCTGGAACGG-TCTGCCGGTGTACGCTG 172
consensus_6990#4      G-AGAGGCACGCA--GAGCGGATTTTTCCTCCACGCATGCCT-TCTTGCGGCCCAAAACG 74
consensus_6990#2      GTACCCGGTCGGA--CCGTGGCTGTTGGCCCTGTTCATCTTTGTCGTGTGCGGCTCGGCG 168
consensus_6990#0      CGACAGACCGGCAATGAACCCGGTATGCCGCAGGAAACGCGCGTACAGAGGGCCGGGTGT 540
                        *       *                 * *            *     *          

consensus_6990#1      ACCGCGTCGACTACCCGATG--CCGGC---CATCCGCTTCAAGGAAAACACCCGTGATGT 226
consensus_6990#3      ACCGCGTCGACTACCCGATG--CCGGC---CATCCGCTTCAAGGAAAACACCCGTGACGT 227
consensus_6990#4      AAGATGCGGATTTTCGGAT---CCGGA---AAACCGCGACAAAAGCGCGATTTCGGGTAG 128
consensus_6990#2      ATATTCCAGATCATTCAGTCGATTCGC---ATAGCATAAGAGGAGGTGGAGAAGGAGAAG 225
consensus_6990#0      GAGTTGGCCATCATTTTGTAG-CCGGCCTTAAGGTACTCCGGCCGGATGTTCCACGACAG 599
                               *        *      *                                  

consensus_6990#1      CCTGGCTC---TGCGCGAGAA--GG-AGAAGGGTGACTGGAAGAAGATGTCGGTGCAGGA 280
consensus_6990#3      CCTGGCTC---TGCGCGAGAA--GG-AGAAGGGTGACTGGAAGAAGATGTCGGTGCAGGA 281
consensus_6990#4      GGTTTTTT---TTTGCAGTTA--CG-ATAAAACCGAG----------------------- 159
consensus_6990#2      GGCTAACGAGATCTGCTGCCAGACG-CTAACAACAACTACAACAACAACAACACAACCAT 284
consensus_6990#0      CGCGTTAAAGTGAGGAAACTGCCAGCAGTACAGCAGCCCGGCCAGGATCCATGCGCCGGC 659
                                    *         *    *                              

consensus_6990#1      GAAGAAGGCCCTGTACCGGGCCTCGTTCTGCCAGACGTTCGCCGAGATGAAGCACCCGAC 340
consensus_6990#3      GAAGAAGGCCCTGTACCGGGCCTCGTTCTGCCAGACGTTCGCCGAGATGAAGCACCCGAC 341
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      CGTCTTGATCACAAAGGGAACCAATCGCCGCCCGCCTCCGTTCG---TGTACTGTCCCGG 341
consensus_6990#0      GCCCAGGTCGCCGCCGGTGCAGGCAGCCCAGCCCATCAGCGGCG----GAATGGCGCCGA 715
                                                                                  

consensus_6990#1      CGGCGAGTGGAAGGCGTGCCTCGGCGCCGCCCTGATCGCCGCCTCCATGAGCCTGATCGG 400
consensus_6990#3      CGGCGAGTGGAAGGCGTGCCTCGGCGCCGCCCTGATCGCCGCCTCCATGAGCCTGATCGG 401
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      AAAATTTTGTTTTCTTTTTTTTTGTGGTGGAGAAAAGCGCATATTGCTTTTCCCACTGTT 401
consensus_6990#0      CGACCGAGCCGACCCACGTATTCAGAATACTGT-AGCGTTTCATTGGGGGTGTAGATGCT 774
                                                                                  

consensus_6990#1      CATGATGCTGCTGAAGGCGTTCGTGTACGAACCGATCCCGGAAACGTTCGACGAGGAGCA 460
consensus_6990#3      CATGATGCTGCTGAAGGCGTTCGTGTACGAACCGATCCCGGAAACGTTCGACGAGGAGCA 461
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      GTAGTCTTTTTCTTTTGCATTCGTTTCGATTTTCCGCTCCCTCAAGTGTGCTACACAACC 461
consensus_6990#0      GGTGTTTGTTATGAGATTGGCGGCGCCCAGTGCGGCCGTCATTTCGTTCACGCCGTAGTA 834
                                                                                  

consensus_6990#1      CCAGAAGGCCCAGCTGAAGCGTATGCTCGACCTCAACATCAACCCGATCCACGGCGTGTC 520
consensus_6990#3      CCAGAAGGCCCAGCTGAAGCGTATGCTCGACCTCAACATCAACCCGATCCACGGCGTGTC 521
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      CCCTTCCCTCTCTCCTTAATTGTAGCTAAATCGCGGGACAAATCGGATCGAATGAAGTGT 521
consensus_6990#0      CAGCATGCTGCAGCCGA---TCGTGCTGGCACCGAGCGCAAAGCCGACCGCGTGCAGGCG 891
                                                                                  

consensus_6990#1      GTCCAAGTGGGACTACGACAACAACAAGTGGAAGTAAAGCACCGGGGTTTCGCAGGTGTG 580
consensus_6990#3      GTCCAAGTGGGACTACGACA---------------------------------------- 541
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      AAATGTAACGTTTTTTGCTTTTAAGTGTACGTGTCTCTACGAGGCATCATTTCCAAGACC 581
consensus_6990#0      TGAGAAATGTCCTTTTACGAGCACTCGGTTGCGCGTGCGGGGCATTTGTGCGTCGAACGA 951
                                                                                  

consensus_6990#1      AAAGTAATTAAATTCCGTGATTATGGTGGTACCCCTCCCTCTCCCCCTTACCCTGGGCGA 640
consensus_6990#3      ------------------------------------------------------------
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      GCTTGATATA-------------------------------------------------- 591
consensus_6990#0      CGTTTCAATGACCTGGTTGATGGAGTTGGCCGCACCCGAGACGAGCGTCGTGCCGGCCGA 1011
                                                                                  

consensus_6990#1      GTGCTGTGGACGCTTGTTGAGCTAATAAAATATCAGTGAAGCCTCTAGGATACTTCATCT 700
consensus_6990#3      ------------------------------------------------------------
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
consensus_6990#0      GCAGAGCAGAAACGTCCCCAGCTCGAACGAACCCGGTGCCATCGCATATCCGGCCATCGC 1071
                                                                                  

consensus_6990#1      GGTGTACTCGTTAAAAAAAAAAAAACAAAGGCCACATGTGCCCGAGCTGCTGGTT----- 755
consensus_6990#3      ------------------------------------------------------------
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
consensus_6990#0      GGTCATCACCACCAGGGACGTCAATCGGATCTTTGATAACATAAGATAATGGTAAATCAA 1131
                                                                                  

consensus_6990#1      ------------------------------------------------------------
consensus_6990#3      ------------------------------------------------------------
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
consensus_6990#0      CCGACTGAGCCCGGGAAGCGACGTCACGGAGGCAACCACTTCCTTCGTGCCATCCTCACC 1191
                                                                                  

consensus_6990#1      ------------------------------------------------------------
consensus_6990#3      ------------------------------------------------------------
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
consensus_6990#0      GCTCTTGCGCAGCGTTCCGACCGATTTACTAATTTCACTAACTATGGCTTTCGGTCCGGC 1251
                                                                                  

consensus_6990#1      ------------------------------------------------------------
consensus_6990#3      ------------------------------------------------------------
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
consensus_6990#0      TTGACGCACGAGGTCCCACCATAGCCGCCCGTTTGCGAGGAATTTATGCATTACACTGGG 1311
                                                                                  

consensus_6990#1      ------------------------------------------------------------
consensus_6990#3      ------------------------------------------------------------
consensus_6990#4      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
consensus_6990#0      CGGCACAACACTGGGAGCATTTTACGTTGCGTACATGCAACAGAACTCGAGCAGCTCGAT 1371
                                                                                  

consensus_6990#1      ---------
consensus_6990#3      ---------
consensus_6990#4      ---------
consensus_6990#2      ---------
consensus_6990#0      GGACGGGTG 1380
                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)