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Anopheles gambiae
cluster # 7018 cluster # 7018       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7018#0 length = 1786 sequences # 4  
consensus_7018#1 length = 1401 sequences # 1  
consensus_7018#2 length = 597 sequences # 1  

consensusID : consensus_7018#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1786
fasta sequence
                              [TTGTCTGGTCAAATAATCGTTACTGTCATATTCACTTGCAAATTTCTCAATCAGTCAGATCAATCCAAAGACAAAAGCTAAACATTCACCATGACTATGAGTACAAATAACTGTGAAAGTATGACATCATACTTCACAAATTCCTATATGAACTCAGATATGCACGGCCACTACCCGGGGACGGGGGTGGACGGCCTGGACACGAGTCAACAGATGTACAGTCATCATAACCAAGCCCACGCGAACCAGGCAAACATGCCACCATATCCGAGGTTTCCTCCCTACGATCGAATGGGCTACTATCAACAAACGATGGATCCAGCGGGATACGCGAGGGCAGACAGTCCGTCAAGTCAGGTGGGTGGCGTGATACCTCCTCAATCCAACGGCAATCCGTTACAGCAGACGCAAGTACAACCCCAGCAACAGCAACCTATCGTTTATGCGAGCTGTAAATTACAGGCTGCCGTTGGCAACGGTCCAAATGGGCTTGGTACGTATGGGACCGAGAATGGGTCTCCTCCGCT-GGATCAGATGGGGCATCATATGGGCACAGCACAAATGACAATACCTCAGCACCATATGGGTCACTCGCAAGGACAGGAATGCTATCCTGAACAAGTACATCAAACCCCACAACACATGGCAATGTATACGAACGCGGGCGGAGGTCCACCGGGTGTAACACAGCAGCAGCCAAATATGATGCATCAGCAACCTCCTCCACTCCATCAAGGACAACAAGCTCCGCCAAATAGCCAAAATGCTAGCTCTGGTCTTCAGTCGCCTTTATATCCTTGGATGAGGAGCCAGTTCGAACGAAAACGTGGGCGGCAAACTTACACCCGTTATCAAACCTTGGAACTGGAGAAAGAGTTTCACTTCAATCGCTATTTAACACGACGACGAAGAATTGAAATTGCACATGCTCTATGCTTGACTGAACGCCAAATCAAAATCTGGTTCCAGAATCGACGAATGAAGTGGAAAAAAGAAAACAAAACCAAAGGTGAACCGGGCTCGGGTGATGAGAATGACATGACACCACCGCAGTCTCCAGCATAAAAACGGCACGGTACCGTCGAGAATCGTTCAAAGCAACAGTAATTACTTCTCGCACCAAACACAAATAGGAGTAACTGCCGTCCGCGTGTTAGCAGATTATCGGAATCGAGTTCCTCCATCATTAAATTAACGATCTAGGATCAAAAATTTGAGTCTTCGCAGTGACATGAATACAAAACGGTGTGTGTTTCAAGTGTGTGTTACTATTCTTTTGCCTATCGAATTATTTGAGCTCCAATACAATCATTTTATTTACATACATGGTGGTTATGGTTTCGTATTTGAAATTAATCACATACATTTATAATCTCGTTGTACTAGCTAAAGTAAGCAACACATCAAATATGAATTCATTGGATCATGTAGCGATCAATCAAATGTATTTTGGGCAGAAAAATATTAGGAATGCGCGATGTAATAAAAACAACTTATGTGACCTCAAACTTAATTTTAAAGACAGAACTAAACAATTATAAGAATTGACTTTCATACATAAACACGCAAAATGGCCAGCAGGTCGTTAAATTACTACATAGAAATTAAACATAAACTGTTACTAGTAGGTTGTACACTATCAAAGAAAACAAATTGTGTGTACAAGGATTTCTAATAAACATGGACTACTCTAACATAGTAGTTCCAATGACGATGTGTAGTCGAAACGAGGTCATAGAAAAAATCATCATGGAATTGTATAAAGAAAGGTCAAATCAGAGTATAA]

[+] EMBL AF080565             [TTGTCTGGTCAAATAATCGTTACTGTCATATTCACTTGCAAATTTCTCAATCAGTCAGATCAATCCAAAGACAAAAGCTAAACATTCACCATGACTATGAGTACAAATAACTGTGAAAGTATGACATCATACTTCACAAATTCCTATATGAACTCAGATATGCACGGCCACTACCCGGGGACGGGGGTGGACGGCCTGGACACGAGTCAACAGATGTACAGTCATCATAACCAAGCCCACGCGAACCAGGCAAACATGCCACCATATCCGAGGTTTCCTCCCTACGATCGAATGGGCTACTATCAACAAACGATGGATCCAGCGGGATACGCGAGGGCAGACAGTCCGTCAAGTCAGGTGGGTGGCGTGATACCTCCTCAATCCAACGGCAATCCGTTACAGCAGACGCAAGTACAACCCCAGCAACAGCAACCTATCGTTTATGCGAGCTGTAAATTACAGGCTGCCGTTGGCAACGGTCCAAATGGGCTTGGTACGTATGGGACCGAGAATGGGTCTCCTCCGCT GGATCAGATGGGGCATCATATGGGCACAGCACAAATGACAATACCTCAGCACCATATGGGTCACTCGCAAGGACAGGAATGCTATCCTGAACAAGTACATCAAACCCCACAACACATGGCAATGTATACGAACGCGGGCGGAGGTCCACCGGGTGTAACACAGCAGCAGCCAAATATGATGCATCAGCAACCTCCTCCACTCCATCAAGGACAACAAGCTCCGCCAAATAGCCAAAATGCTAGCTCTGGTCTTCAGTCGCCTTTATATCCTTGGATGAGGAGCCAGTTCGAACGAAAACGTGGGCGGCAAACTTACACCCGTTATCAAACCTTGGAACTGGAGAAAGAGTTTCACTTCAATCGCTATTTAACACGACGACGAAGAATTGAAATTGCACATGCTCTATGCTTGACTGAACGCCAAATCAAAATCTGGTTCCAGAATCGACGAATGAAGTGGAAAAAAGAAAACAAAACCAAAGGTGAACCGGGCTCGGGTGATGAGAATGACATGACACCACCGCAGTCTCCAGCATAAAAACGGCACGGTACCGTCGAGAATCGTTCAAAGCAACAGTAATTACTTCTCGCACCAAACACAAATAGGAGTAACTGCCGTCCGCGTGTTAGCAGATTATCGGAATCGAGTTCCTCCATCATTAAATTAACGATCTAGGATCAAAAATTTGAGTCTTTGCAGTGACATGAATACAAAACGGTGTGTGTTTCAAGTGTGTGTTACTATTCTTTTGCCTATCGAATTATTTGAGCTCCAATACAATCATTTTATTTACATACATGGTGGTTATGGTTTCGTATTTGAAATTAATCACATACATTTATAATCTCGTTGTACTAGCTAAAGTAAGCAACACATCAAATATGAATTCAT                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM645084             [                         TCATATTCACTTGCAAATTTCTCAATCAGTCAGATCAATCCAAAGACAAAAGCTAAACATTCACCATGACTATGAGTACAAATAACTGTGAAAGTATGACATCATACTTCACAAATTCCTATATGAACTCAGATATGCACGGCCACTACCCGGGGACGGGGGTGGACGGCCTGGACACGAGTCAACAGATGTACAGTCATCATAACCAAGCCCACGCGAACCAGGCAAACATGCCACCATATCCGAGGTTTCCTCCCTACGATCGAATGGGCTACTATCAACAAACGATGGATCCAGCGGGATACGCGAGGGCAGACAGTCCGTCAAGTCAGGTGGGTGGCGTGATACCTCCTCAATCCAACGGCAATCCGTTACAGCAGACGCAAGTACAACCCCAGCAACAGCAACCTATCGTTTATGCGAGCTGTAAATTACAGGCTGCCGTTGGCAACGGTCCAAATGGGCTTGGTACGTATGGGACCGAGAATGGGTCTCCTCCGCTGGGATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM640992             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccGCAAACTTACACCCGTTATCAAACCTTGGAACTGGAGAAAGAGTTTCACTTCAATCGCTATTTAACACGACGACGAAGAATTGAAATTGCACATGCTCTATGCTTGACTGAACGCCAAATCAAAATCTGGTTCCAGAATCGACGAATGAAGTGGAAAAAAGAAAACAAAACCAAAGGTGAACCGGGCTCGGGTGATGAGAATGACATGACACCACCGCAGTCTCCAGCATAAAAACGGCACGGTACCGTCGAGAATCGTTCAAAGCAACAGTAATTACTTCTCGCACCAAACACAAATAGGAGTAACTGCCGTCCGCGTGTTAGCAGATTATCGGAATCGAGTTCCTCCATCATTAAATTAACGATCTAGGATCAAAAATTTGAGTCTTCGCAGTGACATGAATACAAAACGGTGTGTGTTTCAAGTGTGTGTTACTATTCTTTTGCCTATCGAATTATTTGAGCTCCAATACAATCATTTTGTTTACATACATGGTGGTTATGGTTTCGTATTTGAAATTAATCACATACATTTATAATCTCGTTGTACTAGCTAAAGTAAGCAACACATCAAATATGAATTCATTGGATCATGTAGCGATCAATCAAATGTATTTTGGGCAGAAAA                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX627096             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTCCATCATTAAATTAACGATCTAGGATCAAAAATTTGAGTCTTCGCAGTGACATGAATACAAAACGGTGTGTGTTTCAAGTGTGTGTTACTATTCTTTTGCCTATCGAATTATTTGAGCTCCAATACAATCATTTTATTTACATACATGGTGGTTATGGTTTCGTATTTGAAATTAATCACATACATTTATAATCTCGTTGTACTAGCTAAAGTAAGCAACACATCAAATATGAATTCATTGGATCATGTAGCGATCAATCAAATGTATTTTGGGCAGAAAAATATTAGGAATGCGCGATGTAATAAAAACAACTTATGTGACCTCAAACTTAATTTTAAAGACAGAACTAAACAATTATAAGAATTGACTTTCATACATAAACACGCAAAATGGCCAGCAGGTCGTTAAATTACTACATAGAAATTAAACATAAACTGTTACTAGTAGGTTGTACACTATCAAAGAAAACAAATTGTGTGTACAAGGATTTCTAATAAACATGGACTACTCTAACATAGTAGTTCCAATGACGATGTGTAGTCGAAACGAGGTCATAGAAAAAATCATCATGGAATTGTATAAAGAAAGGTCAAATCAGAGTATAA]


>consensus_7018#0 TTGTCTGGTCAAATAATCGTTACTGTCATATTCACTTGCAAATTTCTCAATCAGTCAGAT CAATCCAAAGACAAAAGCTAAACATTCACCATGACTATGAGTACAAATAACTGTGAAAGT ATGACATCATACTTCACAAATTCCTATATGAACTCAGATATGCACGGCCACTACCCGGGG ACGGGGGTGGACGGCCTGGACACGAGTCAACAGATGTACAGTCATCATAACCAAGCCCAC GCGAACCAGGCAAACATGCCACCATATCCGAGGTTTCCTCCCTACGATCGAATGGGCTAC TATCAACAAACGATGGATCCAGCGGGATACGCGAGGGCAGACAGTCCGTCAAGTCAGGTG GGTGGCGTGATACCTCCTCAATCCAACGGCAATCCGTTACAGCAGACGCAAGTACAACCC CAGCAACAGCAACCTATCGTTTATGCGAGCTGTAAATTACAGGCTGCCGTTGGCAACGGT CCAAATGGGCTTGGTACGTATGGGACCGAGAATGGGTCTCCTCCGCTGGATCAGATGGGG CATCATATGGGCACAGCACAAATGACAATACCTCAGCACCATATGGGTCACTCGCAAGGA CAGGAATGCTATCCTGAACAAGTACATCAAACCCCACAACACATGGCAATGTATACGAAC GCGGGCGGAGGTCCACCGGGTGTAACACAGCAGCAGCCAAATATGATGCATCAGCAACCT CCTCCACTCCATCAAGGACAACAAGCTCCGCCAAATAGCCAAAATGCTAGCTCTGGTCTT CAGTCGCCTTTATATCCTTGGATGAGGAGCCAGTTCGAACGAAAACGTGGGCGGCAAACT TACACCCGTTATCAAACCTTGGAACTGGAGAAAGAGTTTCACTTCAATCGCTATTTAACA CGACGACGAAGAATTGAAATTGCACATGCTCTATGCTTGACTGAACGCCAAATCAAAATC TGGTTCCAGAATCGACGAATGAAGTGGAAAAAAGAAAACAAAACCAAAGGTGAACCGGGC TCGGGTGATGAGAATGACATGACACCACCGCAGTCTCCAGCATAAAAACGGCACGGTACC GTCGAGAATCGTTCAAAGCAACAGTAATTACTTCTCGCACCAAACACAAATAGGAGTAAC TGCCGTCCGCGTGTTAGCAGATTATCGGAATCGAGTTCCTCCATCATTAAATTAACGATC TAGGATCAAAAATTTGAGTCTTCGCAGTGACATGAATACAAAACGGTGTGTGTTTCAAGT GTGTGTTACTATTCTTTTGCCTATCGAATTATTTGAGCTCCAATACAATCATTTTATTTA CATACATGGTGGTTATGGTTTCGTATTTGAAATTAATCACATACATTTATAATCTCGTTG TACTAGCTAAAGTAAGCAACACATCAAATATGAATTCATTGGATCATGTAGCGATCAATC AAATGTATTTTGGGCAGAAAAATATTAGGAATGCGCGATGTAATAAAAACAACTTATGTG ACCTCAAACTTAATTTTAAAGACAGAACTAAACAATTATAAGAATTGACTTTCATACATA AACACGCAAAATGGCCAGCAGGTCGTTAAATTACTACATAGAAATTAAACATAAACTGTT ACTAGTAGGTTGTACACTATCAAAGAAAACAAATTGTGTGTACAAGGATTTCTAATAAAC ATGGACTACTCTAACATAGTAGTTCCAATGACGATGTGTAGTCGAAACGAGGTCATAGAA AAAATCATCATGGAATTGTATAAAGAAAGGTCAAATCAGAGTATAA



consensusID : consensus_7018#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1401
fasta sequence
                              [TCAGTAATTATAGTTATCATCATACGCTTTTTGGTGGAAAATGTCTTTGTTCGAATGACTGTCATGCTTCTCAATTTGTGATTTTAGTTAAAAACACCTGTTTTAACTGCGTTTGGCAATTCAAATCATTCAACTCCAGCTACAAGTGGTTAAACCGTCATTATCACGGCAAACAGCCACCCTAAATCGTACTGATACATTAACCTGAGGTCAACTGTAAAAACGTTTTAGTGACTCCGTAACTGCACAACCATGGATGCCAACAACTTTGTGATGTCTTCCTATCAGTTCGTAAACTCGATTGCCTCCTGCTATCCGAATAACTCACAGAACACAAATAGTTCACCAAATACGGCTGGCAGTCAAGGTAGCCAAAACGATGGTTATTTCCCACCATCGACATACGCTCCAAATATTTATCCCGGCACTCCACATCAGGCCCATTACAGCCCTCAATCGTACAATCCGCTTGCAGGGGCTGGAGCGACCAGTGTAAACAGTGCTAGTACTGGCGCTGTAGGTGGCGGACATCAGTCTACCGATATGGTGGATTACACTCAGTTACAACCACAAAAATTCCTACTTTCACAGCAACAACAACCGCAATCCGCCCTTACTTCACAAAGTTGTAAATACGCAAGTGAAGGCCCTAGCACAGGTACAAATGTAATTAATAACAACAATAACAATAGCACCACCAGTCCTCAGGATTTAAGTACAGCCAGTGGAGGAAGCAGTGGAGCCAATGATGGAAATAATGGTAGGCCTGAGATTTCGCCAAAACTGTCCCCAGGATCAGTAGTTGAAAGTGTAAGCCGATCTCTGAAATCGGGTAATCCATCAACTGCCGTGAGTTCTAGTAGCACGAACAATAACACCAGCAACATAAGCAATCGAAACCAGGTGAACCTGCCACTCGCAAGTCCGGAAGAGGAGTCTGAAGCCAGCGATGATGATAGTGGCACGGAAGGAGGCAGCTCTCAAGGTGGTGGAGGAAGTAGCAGTAAGAAAGGAGGACCTCCACCCCATATTTATCCATGGATGAAACGAGTGCATATTGGACAAAGCACGGTGAATGCTAATGGAGAAACGAAACGACAACGCACTTCATACACGCGTTATCAAACGCTCGAGCTAGAGAAAGAGTTTCACTTCAACCGATATTTAACTCGCAGACGACGGATCGAGATAGCACACGCACTGTGTTTAACCGAGCGACAGATCAAAATCTGGTTCCAGAATCGACGAATGAAGTGGAAAAAAGAACACAAGATGGCATCGATGAATATTGTGCCGTATCACATGTCTCCATATGGTCATCCTTATCAATTTGATATTCATCCGTCACAGTTTGCGCATTTGAGCGCATAGGACGCGTTGGCACTTTTCCGGTTACTGGTT]

[+] EMBL AF080564             [TCAGTAATTATAGTTATCATCATACGCTTTTTGGTGGAAAATGTCTTTGTTCGAATGACTGTCATGCTTCTCAATTTGTGATTTTAGTTAAAAACACCTGTTTTAACTGCGTTTGGCAATTCAAATCATTCAACTCCAGCTACAAGTGGTTAAACCGTCATTATCACGGCAAACAGCCACCCTAAATCGTACTGATACATTAACCTGAGGTCAACTGTAAAAACGTTTTAGTGACTCCGTAACTGCACAACCATGGATGCCAACAACTTTGTGATGTCTTCCTATCAGTTCGTAAACTCGATTGCCTCCTGCTATCCGAATAACTCACAGAACACAAATAGTTCACCAAATACGGCTGGCAGTCAAGGTAGCCAAAACGATGGTTATTTCCCACCATCGACATACGCTCCAAATATTTATCCCGGCACTCCACATCAGGCCCATTACAGCCCTCAATCGTACAATCCGCTTGCAGGGGCTGGAGCGACCAGTGTAAACAGTGCTAGTACTGGCGCTGTAGGTGGCGGACATCAGTCTACCGATATGGTGGATTACACTCAGTTACAACCACAAAAATTCCTACTTTCACAGCAACAACAACCGCAATCCGCCCTTACTTCACAAAGTTGTAAATACGCAAGTGAAGGCCCTAGCACAGGTACAAATGTAATTAATAACAACAATAACAATAGCACCACCAGTCCTCAGGATTTAAGTACAGCCAGTGGAGGAAGCAGTGGAGCCAATGATGGAAATAATGGTAGGCCTGAGATTTCGCCAAAACTGTCCCCAGGATCAGTAGTTGAAAGTGTAAGCCGATCTCTGAAATCGGGTAATCCATCAACTGCCGTGAGTTCTAGTAGCACGAACAATAACACCAGCAACATAAGCAATCGAAACCAGGTGAACCTGCCACTCGCAAGTCCGGAAGAGGAGTCTGAAGCCAGCGATGATGATAGTGGCACGGAAGGAGGCAGCTCTCAAGGTGGTGGAGGAAGTAGCAGTAAGAAAGGAGGACCTCCACCCCATATTTATCCATGGATGAAACGAGTGCATATTGGACAAAGCACGGTGAATGCTAATGGAGAAACGAAACGACAACGCACTTCATACACGCGTTATCAAACGCTCGAGCTAGAGAAAGAGTTTCACTTCAACCGATATTTAACTCGCAGACGACGGATCGAGATAGCACACGCACTGTGTTTAACCGAGCGACAGATCAAAATCTGGTTCCAGAATCGACGAATGAAGTGGAAAAAAGAACACAAGATGGCATCGATGAATATTGTGCCGTATCACATGTCTCCATATGGTCATCCTTATCAATTTGATATTCATCCGTCACAGTTTGCGCATTTGAGCGCATAGGACGCGTTGGCACTTTTCCGGTTACTGGTT]


>consensus_7018#1 TCAGTAATTATAGTTATCATCATACGCTTTTTGGTGGAAAATGTCTTTGTTCGAATGACT GTCATGCTTCTCAATTTGTGATTTTAGTTAAAAACACCTGTTTTAACTGCGTTTGGCAAT TCAAATCATTCAACTCCAGCTACAAGTGGTTAAACCGTCATTATCACGGCAAACAGCCAC CCTAAATCGTACTGATACATTAACCTGAGGTCAACTGTAAAAACGTTTTAGTGACTCCGT AACTGCACAACCATGGATGCCAACAACTTTGTGATGTCTTCCTATCAGTTCGTAAACTCG ATTGCCTCCTGCTATCCGAATAACTCACAGAACACAAATAGTTCACCAAATACGGCTGGC AGTCAAGGTAGCCAAAACGATGGTTATTTCCCACCATCGACATACGCTCCAAATATTTAT CCCGGCACTCCACATCAGGCCCATTACAGCCCTCAATCGTACAATCCGCTTGCAGGGGCT GGAGCGACCAGTGTAAACAGTGCTAGTACTGGCGCTGTAGGTGGCGGACATCAGTCTACC GATATGGTGGATTACACTCAGTTACAACCACAAAAATTCCTACTTTCACAGCAACAACAA CCGCAATCCGCCCTTACTTCACAAAGTTGTAAATACGCAAGTGAAGGCCCTAGCACAGGT ACAAATGTAATTAATAACAACAATAACAATAGCACCACCAGTCCTCAGGATTTAAGTACA GCCAGTGGAGGAAGCAGTGGAGCCAATGATGGAAATAATGGTAGGCCTGAGATTTCGCCA AAACTGTCCCCAGGATCAGTAGTTGAAAGTGTAAGCCGATCTCTGAAATCGGGTAATCCA TCAACTGCCGTGAGTTCTAGTAGCACGAACAATAACACCAGCAACATAAGCAATCGAAAC CAGGTGAACCTGCCACTCGCAAGTCCGGAAGAGGAGTCTGAAGCCAGCGATGATGATAGT GGCACGGAAGGAGGCAGCTCTCAAGGTGGTGGAGGAAGTAGCAGTAAGAAAGGAGGACCT CCACCCCATATTTATCCATGGATGAAACGAGTGCATATTGGACAAAGCACGGTGAATGCT AATGGAGAAACGAAACGACAACGCACTTCATACACGCGTTATCAAACGCTCGAGCTAGAG AAAGAGTTTCACTTCAACCGATATTTAACTCGCAGACGACGGATCGAGATAGCACACGCA CTGTGTTTAACCGAGCGACAGATCAAAATCTGGTTCCAGAATCGACGAATGAAGTGGAAA AAAGAACACAAGATGGCATCGATGAATATTGTGCCGTATCACATGTCTCCATATGGTCAT CCTTATCAATTTGATATTCATCCGTCACAGTTTGCGCATTTGAGCGCATAGGACGCGTTG GCACTTTTCCGGTTACTGGTT



consensusID : consensus_7018#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 597
fasta sequence
                              [AGAATCGCCCGAGGTAATTACGATCTAGGATCAAAATTGAGTCTTCGCAGTGACATGAATACAAAACGGTGTGTGTTTCAAGTGTGTGTTACTATTCTTTGCCTATCGAATTATTTGAGCTCCAATACAATCATTTTATTTACATATTGTGGTCTACTGGTTTCGTATTTGAAANTTAATCACATACATTTATAATCTCGCCTCNGTACTAGCTAAAGTAAGCAACACATCAAATATGAATTCATTGGATCATGTAGCGATCAATCAAATGTATTTTGGGCAGAAANAATATTAGGAATGCGCGATGTAATAAAAACAACTTATGTGACCTCAAACTTAATTTNTAAACGACAGAACTAAACAATTATAAGAATTGACTTTCATACNTAAACACGCAAAATGGCCAGCAGGTCGTTAAATTACTACATAGAAATTAAACATAAACTGTTACTAGTAGGTTGTACACTATCAAAGAAAACAAATTGTGTGTACAAGGATTTCTANTANAACATGGACTACTCTAACATAGTAGTTCCAATGACGATAGTGTAGTCGAAACGAGGTCATAGACAAAAATCATCATGGAATTGTATAAAG]

[+] EMBL AL930025             [AGAATCGCCCGAGGTAATTACGATCTAGGATCAAAATTGAGTCTTCGCAGTGACATGAATACAAAACGGTGTGTGTTTCAAGTGTGTGTTACTATTCTTTGCCTATCGAATTATTTGAGCTCCAATACAATCATTTTATTTACATATTGTGGTCTACTGGTTTCGTATTTGAAANTTAATCACATACATTTATAATCTCGCCTCNGTACTAGCTAAAGTAAGCAACACATCAAATATGAATTCATTGGATCATGTAGCGATCAATCAAATGTATTTTGGGCAGAAANAATATTAGGAATGCGCGATGTAATAAAAACAACTTATGTGACCTCAAACTTAATTTNTAAACGACAGAACTAAACAATTATAAGAATTGACTTTCATACNTAAACACGCAAAATGGCCAGCAGGTCGTTAAATTACTACATAGAAATTAAACATAAACTGTTACTAGTAGGTTGTACACTATCAAAGAAAACAAATTGTGTGTACAAGGATTTCTANTANAACATGGACTACTCTAACATAGTAGTTCCAATGACGATAGTGTAGTCGAAACGAGGTCATAGACAAAAATCATCATGGAATTGTATAAAG]


>consensus_7018#2 AGAATCGCCCGAGGTAATTACGATCTAGGATCAAAATTGAGTCTTCGCAGTGACATGAAT ACAAAACGGTGTGTGTTTCAAGTGTGTGTTACTATTCTTTGCCTATCGAATTATTTGAGC TCCAATACAATCATTTTATTTACATATTGTGGTCTACTGGTTTCGTATTTGAAANTTAAT CACATACATTTATAATCTCGCCTCNGTACTAGCTAAAGTAAGCAACACATCAAATATGAA TTCATTGGATCATGTAGCGATCAATCAAATGTATTTTGGGCAGAAANAATATTAGGAATG CGCGATGTAATAAAAACAACTTATGTGACCTCAAACTTAATTTNTAAACGACAGAACTAA ACAATTATAAGAATTGACTTTCATACNTAAACACGCAAAATGGCCAGCAGGTCGTTAAAT TACTACATAGAAATTAAACATAAACTGTTACTAGTAGGTTGTACACTATCAAAGAAAACA AATTGTGTGTACAAGGATTTCTANTANAACATGGACTACTCTAACATAGTAGTTCCAATG ACGATAGTGTAGTCGAAACGAGGTCATAGACAAAAATCATCATGGAATTGTATAAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7018#0      TTGTCTGGTCAAATAATCGTTACTGTCATATTCACTTGCAAATTTCTCAATCAGTCAGAT 60
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      ------------------------------------------------------------
                                                                                  

consensus_7018#0      CAATCCAAAGACAAAAGCTAAACATTCACCATGACTATGAGTACAAATAACTGTGAAAGT 120
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      ------------------------------------------------------------
                                                                                  

consensus_7018#0      ATGACATCATACTTCACAAATTCCTATATGAACTCAGATATGCACGGCCACTACCCGGGG 180
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      ------------------------------------------------------------
                                                                                  

consensus_7018#0      ACGGGGGTGGACGGCCTGGACACGAGTCAACAGATGTACAGTCATCATAACCAAGCCCAC 240
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      ------------------------------------------------------------
                                                                                  

consensus_7018#0      GCGAACCAGGCAAACATGCCACCATATCCGAGGTTTCCTCCCTACGATCGAATGGGCTAC 300
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      ------------------------------------------------------------
                                                                                  

consensus_7018#0      TATCAACAAACGATGGATCCAGCGGGATACGCGAGGGCAGACAGTCCGTCAAGTCAGGTG 360
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      -------------------------------TCAGTAATTATAGTTATCATCATACGCTT 29
                                                                                  

consensus_7018#0      GGTGGCGTGATACCTCCTCAATCCAACGGCAATC-CGTTACAGCAGACGCAAGTACAACC 419
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      TTTGGTGGAAAATGTCTTTGTTCGAATGACTGTCATGCTTCTCAATTTGTGATTTTAGTT 89
                                                                                  

consensus_7018#0      CCAGCAACAGCAACCTATCGTTTATGCGAGCTGTAAATTACAGGCTGCCGTTGGCAACGG 479
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      AAAAACACCTGTTTTAACTGCGTTTGGCAATTCAAATCATTCAACTCCAGCTACAAGTGG 149
                                                                                  

consensus_7018#0      TCCAAATGGGCTTGGTACGTATGGGACCGAGAATGGGTCTCCTCCGCTGGATCAGATGGG 539
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      TTAAACCGTCATTATCACGGCAAACAGCCACCCTAAATCGTACTGATACATTAACCTGAG 209
                                                                                  

consensus_7018#0      GCATCATATGGGCACAGCACAAATGACAATACCTCAGCACCATATGGGTCACTCGCAAGG 599
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      GTCAACTGTAAAAAC-GTTTTAGTGACTCCGTAACTGCACAACCATGGATGCCAACAACT 268
                                                                                  

consensus_7018#0      ACAGGAATGCTATCCTGAACAAGTACATCAAACCCCACAACACATGGCAATGTATACGAA 659
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      TT-GTGATGTCTTCCT--ATCAGTTCGT-AAACTCGATTGCCTCCTGCTATCCGAATAAC 324
                                                                                  

consensus_7018#0      CGCGGGCGGAGGTCCACCGGGTGTAACACAGC-AGCAGCCAAATATGATGCATCAGCAAC 718
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      TCACAGAACACAAATAGTTCACCAAATACGGCTGGCAGTCAAGGTAGCCAAAACGATGGT 384
                                                                                  

consensus_7018#0      CTCCTCCACTCCATCAAGGACAACAAGCTCCGCCAAATAGCCAAAATGCTAGCTCTGGTC 778
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      TATTTCC----CACCATCGACA-TACGCT---CCAAATATTTA---TCCCGGCACTCCAC 433
                                                                                  

consensus_7018#0      TTCAGTCGCCTTTATATCCTTGGATGAGGAGCCAGTTCGAACGAAAACGTGGGCGGCAAA 838
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      ATCAGGCCCATTACAGCCCTCAATCGTACAATCCGCTTG--CAGGGGCTGGAGCGACCAG 491
                                                                                  

consensus_7018#0      CTTACACCCGTTATCAAACCTTGGAACTGGAGAAAGAGTTTCACTTCAATC-GCTATTTA 897
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      TGTAAACAGT---GCTAGTACTGGCGCTGTAGGTGGCG---GACATCAGTCTACCGATAT 545
                                                                                  

consensus_7018#0      ACACGACGACGAAGAATTGAAATTGCACATGCTCTATGCTTGACTGAACGCCAAATCAAA 957
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      GGTGGATTACACTCAGTTACAACCACAAAAATTCCTACTTTCACAGCAACAACAACCGCA 605
                                                                                  

consensus_7018#0      ATCTGGTTCCAGAATCGACGAATG-AAGTGGAAAAAAGAAAACAAAACCAAAGGTGAACC 1016
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      ATCCGCCCTTACTTCACAAAGTTGTAAATACGCAAGTGAAGGCCCTAGCACAGGTACAAA 665
                                                                                  

consensus_7018#0      GGGCTCGGGTGATGAGAATGACA-TGACACCACCGCAGTCTCCAGCATAAAAACGGCACG 1075
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      TGTAATTAATAACAACAATAACAATAGCACCAC--CAGTCCTCAGGATTTAAGTACAGCC 723
                                                                                  

consensus_7018#0      GTACCGTCGAGAATCGTTCAAAGCAACAGTAATTACTTCTCGCACCAAACACAAATAGGA 1135
consensus_7018#2      ------------------------------------------------------------
consensus_7018#1      AGTGGAGGAAGCAGTGGAGCCAATGATGGAAATAATGGTAGGCCTGAGATTTCGCCAAAA 783
                                                                                  

consensus_7018#0      GTAACTGCCGTCCGCGTGTTAGCAGATTATCGGAATCGAGTTCCTCCATCATTAAATTAA 1195
consensus_7018#2      -------------------------------------AGAATCGCCCGAGGT--AATTA- 20
consensus_7018#1      CTGTCCCCAG---GATCAGTAGTTGAAAGTGTAAGCCGATCTCTGAAATCGGGTAATCCA 840
                                                               **           ***   

consensus_7018#0      CGATCTAGGATCAAAAATTTGAGTCTTCGCAGTGACATGAATACAAAACGGTGTGTGTTT 1255
consensus_7018#2      CGATCTAGGATCAAAA--TTGAGTCTTCGCAGTGACATGAATACAAAACGGTGTGTGTTT 78
consensus_7018#1      TCAACTGCCGTGAGTTCTAGTAGCACGAACAATAACACCAGCAACATAAGCAATCGAAAC 900
                        * **    * *        **      ** * ***  *  *  * * *   *      

consensus_7018#0      CAAGTGTGTGTTACTATTCTTTTGCCTATCGAATTATTTGAGCTCCAATACAATCATTTT 1315
consensus_7018#2      CAAGTGTGTGTTACTATTCTTT-GCCTATCGAATTATTTGAGCTCCAATACAATCATTTT 137
consensus_7018#1      CAGGTGAAC-CTGCCACTCGCAAGTCCGGAAGAGGAGTCTGAAGCCA--GCGATGATGAT 957
                      ** ***     * * * **    * *      *  * *      ***   * ** **  *

consensus_7018#0      ATTTACATACATGGTGGTTATGGTT----TCGTATTTGAAATT-----AATCACATACAT 1366
consensus_7018#2      ATTTACATATTGTGGTCTACTGGTT----TCGTATTTGAAANTT----AATCACATACAT 189
consensus_7018#1      AGTGGCACGGAAGGAGGCAGCTCTCAAGGTGGTGGAGGAAGTAGCAGTAAGAAAGGAGGA 1017
                      * *  **      *         *     * **    ***        **  *   *   

consensus_7018#0      TTATAATCTCGT---TGTAC-TAGCTAAAGTAAGCAACACATCAAATATGAATTCATTGG 1422
consensus_7018#2      TTATAATCTCGCCTCNGTAC-TAGCTAAAGTAAGCAACACATCAAATATGAATTCATTGG 248
consensus_7018#1      CCTCCACCCCATATTTATCCATGGATGAAACGAGTG-CATATTGGACA-AAGCACGGTGA 1075
                           * * *       * * * * * **   **   ** **   * *  *   *  ** 

consensus_7018#0      ATC---ATGTAGCGATCAATCAAATGTATTTTGGGCAGAAAAA-TATTAGGAATGCGCGA 1478
consensus_7018#2      ATC---ATGTAGCGATCAATCAAATGTATTTTGGGCAGAAANAATATTAGGAATGCGCGA 305
consensus_7018#1      ATGCTAATGGAGAAACGAAACGACAACGCACTTCATACACGCGTTATCA--AACGCTCGA 1133
                      **    *** **  *  ** * *        *    * *     *** *  ** ** ***

consensus_7018#0      TGTAATAAAAACAACTTATGTGACCTCAAACTTAATTTTAAA--GACAGAACTAAACAAT 1536
consensus_7018#2      TGTAATAAAAACAACTTATGTGACCTCAAACTTAATTTNTAAACGACAGAACTAAACAAT 365
consensus_7018#1      GCTAGAGAAAGAGTTTCACTTCAACCGATATTTAACTCGCAGACGACGGATCGAGATAGC 1193
                        **   ***     * *  * * *  * * **** *   *   *** ** * * * *  

consensus_7018#0      TATAAGAATTGACTTTCATACATAAACACGCAAAA---TGGCCAGCAGGTCGTTAAATTA 1593
consensus_7018#2      TATAAGAATTGACTTTCATACNTAAACACGCAAAA---TGGCCAGCAGGTCGTTAAATTA 422
consensus_7018#1      -ACACGCACTGTGTTTAACCGAGCGACAGATCAAAATCTGGTTCCAGAATCGACGAATGA 1252
                       * * * * **  *** *       ***    ***   ***        ***   *** *

consensus_7018#0      CTACATAGAAATTAAACATAAACTGTTACTAGTAGGTTGTACACTATCAAAGAAAACAAA 1653
consensus_7018#2      CTACATAGAAATTAAACATAAACTGTTACTAGTAGGTTGTACACTATCAAAGAAAACAAA 482
consensus_7018#1      --AGTGGAAAAAAGAACACAAGATGGCATCGATGAATATTGTGCCGT--------ATCAC 1302
                        *     ***   **** **  **  *    *   *  *   *  *        *  * 

consensus_7018#0      TTGTGTGTACAAGGAT-TTCTAATAAA-CATGGACTACTCTAACATAGTAGTTCCAATGA 1711
consensus_7018#2      TTGTGTGTACAAGGAT-TTCTANTANAACATGGACTACTCTAACATAGTAGTTCCAATGA 541
consensus_7018#1      ATGTCTCCATATGGTCATCCTTATCAATTTGATATTCATCCGTCACAGT--TTGCGCATT 1360
                       *** *  * * **   * **  *  *      * *  **   ** ***  ** *     

consensus_7018#0      CGAT-GTGTAGTCGAAACGAGGTCATAGA-AAAAATCATCATGGAATTGTATAAAGAAAG 1769
consensus_7018#2      CGATAGTGTAGTCGAAACGAGGTCATAGACAAAAATCATCATGGAATTGTATAAAG---- 597
consensus_7018#1      TGAGCGCATAG--GACGCGTTGGCACTTTTCCGGTTACTGGTT----------------- 1401
                       **  *  ***  **  **  * **          *  *  *                  

consensus_7018#0      GTCAAATCAGAGTATAA 1786
consensus_7018#2      -----------------
consensus_7018#1      -----------------
                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)