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Anopheles gambiae
cluster # 704 cluster # 704       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_704#0 length = 690 sequences # 1  
consensus_704#1 length = 681 sequences # 1  

consensusID : consensus_704#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 690
fasta sequence
                              [CCGCCCACGCGTCCGGTTGCGCCGAGTGGTCCGCTGGTGCGCCCGCAATCTTTTTGCCAGGGTTTACACTGTGTGTGTGTTTGTGTTTGTTTGTGTGTTCCGTTTAGTGTAGTAGTATGGTTACAGCGCATTTCGTCTACCGATGATTTGCAAAAGATTATCACCTATTGCTGCCAGCTATCGGGCCGTATTTTTGGATGGTGGAGTTGATAAGAACATCGCACGCAACCACTGCATCAACAGCAACAAAAGTGTGCTGCCATTGTTTTACATTCGTCGTGAACTATGTTTTTCTTCTGTGTGTGTTTCACCAGCTGTCAAAGTCGCACGTAAACAAACGGCACAGCGAGACTACTGCCAACTGGTACAACCGGCAAGTGGCAACGAAAAGCCGGCAAATATGAGCGAATTCAACACAATTGCACGTCCTTCGGCGCACGGACAACTGTTGGACAATAAAACCCTGTTTCCCGATCCACCTGCACGTGGCCCACTGACCCGGTACCGGAAGCAAGCTTCCATCGATTGGCGCAAACTCAAGCTTTCCTTTCACGATGAACCGTCCCTCAAGCTGCAGCACCGGGTGTGGGAGTTTGCCAGCAAGCACCCACTGTTCGCGCATCCGACCGGCACGCTAACGATGGACGAGGAACGCCACCTAGCCACCAAGCGCATGTACGTGGTACAGAA]

[+] EMBL BM619395             [CCGCCCACGCGTCCGGTTGCGCCGAGTGGTCCGCTGGTGCGCCCGCAATCTTTTTGCCAGGGTTTACACTGTGTGTGTGTTTGTGTTTGTTTGTGTGTTCCGTTTAGTGTAGTAGTATGGTTACAGCGCATTTCGTCTACCGATGATTTGCAAAAGATTATCACCTATTGCTGCCAGCTATCGGGCCGTATTTTTGGATGGTGGAGTTGATAAGAACATCGCACGCAACCACTGCATCAACAGCAACAAAAGTGTGCTGCCATTGTTTTACATTCGTCGTGAACTATGTTTTTCTTCTGTGTGTGTTTCACCAGCTGTCAAAGTCGCACGTAAACAAACGGCACAGCGAGACTACTGCCAACTGGTACAACCGGCAAGTGGCAACGAAAAGCCGGCAAATATGAGCGAATTCAACACAATTGCACGTCCTTCGGCGCACGGACAACTGTTGGACAATAAAACCCTGTTTCCCGATCCACCTGCACGTGGCCCACTGACCCGGTACCGGAAGCAAGCTTCCATCGATTGGCGCAAACTCAAGCTTTCCTTTCACGATGAACCGTCCCTCAAGCTGCAGCACCGGGTGTGGGAGTTTGCCAGCAAGCACCCACTGTTCGCGCATCCGACCGGCACGCTAACGATGGACGAGGAACGCCACCTAGCCACCAAGCGCATGTACGTGGTACAGAA]


>consensus_704#0 CCGCCCACGCGTCCGGTTGCGCCGAGTGGTCCGCTGGTGCGCCCGCAATCTTTTTGCCAG GGTTTACACTGTGTGTGTGTTTGTGTTTGTTTGTGTGTTCCGTTTAGTGTAGTAGTATGG TTACAGCGCATTTCGTCTACCGATGATTTGCAAAAGATTATCACCTATTGCTGCCAGCTA TCGGGCCGTATTTTTGGATGGTGGAGTTGATAAGAACATCGCACGCAACCACTGCATCAA CAGCAACAAAAGTGTGCTGCCATTGTTTTACATTCGTCGTGAACTATGTTTTTCTTCTGT GTGTGTTTCACCAGCTGTCAAAGTCGCACGTAAACAAACGGCACAGCGAGACTACTGCCA ACTGGTACAACCGGCAAGTGGCAACGAAAAGCCGGCAAATATGAGCGAATTCAACACAAT TGCACGTCCTTCGGCGCACGGACAACTGTTGGACAATAAAACCCTGTTTCCCGATCCACC TGCACGTGGCCCACTGACCCGGTACCGGAAGCAAGCTTCCATCGATTGGCGCAAACTCAA GCTTTCCTTTCACGATGAACCGTCCCTCAAGCTGCAGCACCGGGTGTGGGAGTTTGCCAG CAAGCACCCACTGTTCGCGCATCCGACCGGCACGCTAACGATGGACGAGGAACGCCACCT AGCCACCAAGCGCATGTACGTGGTACAGAA



consensusID : consensus_704#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 681
fasta sequence
                              [CCGTGCGTAGCGAGGTTGTTGCGCCGAGTGGTCCGCTGGTGCGCCCGCAATCTTTTTGCCAGGGTTTACACTGTGTGTGTTTGTGTTTGTTTGTGTGTTCCGTTTAGTGTAGTAGTATGGTTACAGCGCATTTCGTCTACCGATGATTTGCAAAAGATTATCACCTATTGCTGCCAGCTATCGGGCCGTATTTTTGGATGGTGGGGTTGATAAGAGCATCGCACGCAACCACTGCATCAACAGCAACAAAAGTGTGCTGCCATTGTTTTACATTCGTCGTGAACTATGTTTTTCTTCTGTGTGTGTTTCACCAGCTGTCAAAGTTGCACGTAAACAAACGCCACAGCGAGACTACTGCCAACTGGTACAACCGGCAAGTGGCAACGAAAAGCCGGCAAATATGAGCGAATTCAACACGATTGCACGTCCTTCGGCGCAGGGACAACTGTTGGACAATAAAACCCTCTTTCCCGATCCACCTGCACGTGGCCCACTGACCCGGTACCGGAAGCAAGCTTCCATCGATTGGCGCAAACTCAAGCTTTCCTTTCACGATGAACCGTCCCTCAACCTGCAGCACCGGGTGTGGGAGTTTGCCAGCAAGCACCCACTGTTCGCCCATCCGACCGGCACGCTAACGATGGGACGAGGAACGCCACCTAGCCACCAAGCGCATGTACG]

[+] EMBL BM652168             [CCGTGCGTAGCGAGGTTGTTGCGCCGAGTGGTCCGCTGGTGCGCCCGCAATCTTTTTGCCAGGGTTTACACTGTGTGTGTTTGTGTTTGTTTGTGTGTTCCGTTTAGTGTAGTAGTATGGTTACAGCGCATTTCGTCTACCGATGATTTGCAAAAGATTATCACCTATTGCTGCCAGCTATCGGGCCGTATTTTTGGATGGTGGGGTTGATAAGAGCATCGCACGCAACCACTGCATCAACAGCAACAAAAGTGTGCTGCCATTGTTTTACATTCGTCGTGAACTATGTTTTTCTTCTGTGTGTGTTTCACCAGCTGTCAAAGTTGCACGTAAACAAACGCCACAGCGAGACTACTGCCAACTGGTACAACCGGCAAGTGGCAACGAAAAGCCGGCAAATATGAGCGAATTCAACACGATTGCACGTCCTTCGGCGCAGGGACAACTGTTGGACAATAAAACCCTCTTTCCCGATCCACCTGCACGTGGCCCACTGACCCGGTACCGGAAGCAAGCTTCCATCGATTGGCGCAAACTCAAGCTTTCCTTTCACGATGAACCGTCCCTCAACCTGCAGCACCGGGTGTGGGAGTTTGCCAGCAAGCACCCACTGTTCGCCCATCCGACCGGCACGCTAACGATGGGACGAGGAACGCCACCTAGCCACCAAGCGCATGTACG]


>consensus_704#1 CCGTGCGTAGCGAGGTTGTTGCGCCGAGTGGTCCGCTGGTGCGCCCGCAATCTTTTTGCC AGGGTTTACACTGTGTGTGTTTGTGTTTGTTTGTGTGTTCCGTTTAGTGTAGTAGTATGG TTACAGCGCATTTCGTCTACCGATGATTTGCAAAAGATTATCACCTATTGCTGCCAGCTA TCGGGCCGTATTTTTGGATGGTGGGGTTGATAAGAGCATCGCACGCAACCACTGCATCAA CAGCAACAAAAGTGTGCTGCCATTGTTTTACATTCGTCGTGAACTATGTTTTTCTTCTGT GTGTGTTTCACCAGCTGTCAAAGTTGCACGTAAACAAACGCCACAGCGAGACTACTGCCA ACTGGTACAACCGGCAAGTGGCAACGAAAAGCCGGCAAATATGAGCGAATTCAACACGAT TGCACGTCCTTCGGCGCAGGGACAACTGTTGGACAATAAAACCCTCTTTCCCGATCCACC TGCACGTGGCCCACTGACCCGGTACCGGAAGCAAGCTTCCATCGATTGGCGCAAACTCAA GCTTTCCTTTCACGATGAACCGTCCCTCAACCTGCAGCACCGGGTGTGGGAGTTTGCCAG CAAGCACCCACTGTTCGCCCATCCGACCGGCACGCTAACGATGGGACGAGGAACGCCACC TAGCCACCAAGCGCATGTACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_704#0      CCGCCCAC-GCGTC-CGGTTGCGCCGAGTGGTCCGCTGGTGCGCCCGCAATCTTTTTGCC 58
consensus_704#1      CCGTGCGTAGCGAGGTTGTTGCGCCGAGTGGTCCGCTGGTGCGCCCGCAATCTTTTTGCC 60
                     ***  *   ***     *******************************************

consensus_704#0      AGGGTTTACACTGTGTGTGTGTTTGTGTTTGTTTGTGTGTTCCGTTTAGTGTAGTAGTAT 118
consensus_704#1      AGGGTTTACACTGTGTGTGT--TTGTGTTTGTTTGTGTGTTCCGTTTAGTGTAGTAGTAT 118
                     ********************  **************************************

consensus_704#0      GGTTACAGCGCATTTCGTCTACCGATGATTTGCAAAAGATTATCACCTATTGCTGCCAGC 178
consensus_704#1      GGTTACAGCGCATTTCGTCTACCGATGATTTGCAAAAGATTATCACCTATTGCTGCCAGC 178
                     ************************************************************

consensus_704#0      TATCGGGCCGTATTTTTGGATGGTGGAGTTGATAAGAACATCGCACGCAACCACTGCATC 238
consensus_704#1      TATCGGGCCGTATTTTTGGATGGTGGGGTTGATAAGAGCATCGCACGCAACCACTGCATC 238
                     ************************** ********** **********************

consensus_704#0      AACAGCAACAAAAGTGTGCTGCCATTGTTTTACATTCGTCGTGAACTATGTTTTTCTTCT 298
consensus_704#1      AACAGCAACAAAAGTGTGCTGCCATTGTTTTACATTCGTCGTGAACTATGTTTTTCTTCT 298
                     ************************************************************

consensus_704#0      GTGTGTGTTTCACCAGCTGTCAAAGTCGCACGTAAACAAACGGCACAGCGAGACTACTGC 358
consensus_704#1      GTGTGTGTTTCACCAGCTGTCAAAGTTGCACGTAAACAAACGCCACAGCGAGACTACTGC 358
                     ************************** *************** *****************

consensus_704#0      CAACTGGTACAACCGGCAAGTGGCAACGAAAAGCCGGCAAATATGAGCGAATTCAACACA 418
consensus_704#1      CAACTGGTACAACCGGCAAGTGGCAACGAAAAGCCGGCAAATATGAGCGAATTCAACACG 418
                     *********************************************************** 

consensus_704#0      ATTGCACGTCCTTCGGCGCACGGACAACTGTTGGACAATAAAACCCTGTTTCCCGATCCA 478
consensus_704#1      ATTGCACGTCCTTCGGCGCAGGGACAACTGTTGGACAATAAAACCCTCTTTCCCGATCCA 478
                     ******************** ************************** ************

consensus_704#0      CCTGCACGTGGCCCACTGACCCGGTACCGGAAGCAAGCTTCCATCGATTGGCGCAAACTC 538
consensus_704#1      CCTGCACGTGGCCCACTGACCCGGTACCGGAAGCAAGCTTCCATCGATTGGCGCAAACTC 538
                     ************************************************************

consensus_704#0      AAGCTTTCCTTTCACGATGAACCGTCCCTCAAGCTGCAGCACCGGGTGTGGGAGTTTGCC 598
consensus_704#1      AAGCTTTCCTTTCACGATGAACCGTCCCTCAACCTGCAGCACCGGGTGTGGGAGTTTGCC 598
                     ******************************** ***************************

consensus_704#0      AGCAAGCACCCACTGTTCGCGCATCCGACCGGCACGCTAACGATGG-ACGAGGAACGCCA 657
consensus_704#1      AGCAAGCACCCACTGTTCGCCCATCCGACCGGCACGCTAACGATGGGACGAGGAACGCCA 658
                     ******************** ************************* *************

consensus_704#0      CCTAGCCACCAAGCGCATGTACGTGGTACAGAA 690
consensus_704#1      CCTAGCCACCAAGCGCATGTACG---------- 681
                     ***********************          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)