These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7041#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1405 fasta sequence [GTGCGTGCGTGCGTGCGGGCCCCGCCGTGGTCTCGAAGGATTGCCGGAACAGGGACCGGAAATGTGTGTGTGTGTGCGGTGTGTGCGCGCCTATGTGTGTGTGTTGTTTAGTGTAGCATATGCCAATTTCATTACTTTTAACGCTCTGTTGTGTTGTTTGTAATGCTCGAGGATGTGCAAAAACAAAAATATAAACTGCTCTCACTGCTATGCTACTAGATACACACACACTTACAAGAATTTCAAATAGAAATTAAATGCAACTACACGAGCTAAATAATACAAAGCACAACACCACCACAG-AAAACACAAGCAGAAACACTACTACACCGCTTTGGTTTGATTTATCATATTATAACAACAACCCCGGTAGCAGGAGGAATGATTTTCCTACTCAACTCTCAACTACTCAACACTTAATAGCATAAACAGCTCTAA-------TAATCATTGCTCGATTGCTTATTCTGCTGCGCCTTCATCCACGCG--CGCGCGCCCTCTGTTGGGTGTGATGGAAAACCGGGGGGAGTCCCCCAACTACATTTGCTACTAAAAGCGTATCATTCCTGCTGGGATCACACCTGCTTGGC-ATTATGTTTTTTT--TTGTAATTTGGTGAATCTTCATGTAAATAGCGGCATTATTAATAATACACACTAGCGGTAGAATTTGAATCTTATTTCAGTCTAGAGCAGTTAGAAGAGCGAGCGGGCATATTTAGCCCATTAGCACTAGAAAGAAGGTTTACTATGTTTGCTACACGAGAGTGTACTCGTGTGATGAGAGCATCATCATCTTACTCACATCTTTTGATATAGAATTGATCATTTGCGAGCGATCTAATCACAATCGAACCCGAACCTCGAACACAGCAGCACGTTATTCTCGAAATGTACACACAAGTATGCGTATATTGTAGCTTGAGTTTTGAGGGTAGCGGAAGGGGTACGTGTACTGATGAAGCAGTAAATTATCAGTATCATTTGCCTAGGTATGGATAACCACTTTGCGGAATTATTTAGTTGTATAAGGGCGAGCGCGCGGTACAGGCATATATCACTGTAAGTTGCTGTAGCGGGCTAAT-CTTAAACGCCGTAGTAATTGAACTCTCATTTTTATCCCTTTTTGACGTGCTGATGAATGCTAACTTTCCTGTAAATCGAACCATCGAGCTGCGAACGTGGTTGGATCTGTTGACGTGTGAAGCGTTTGTGTTTGCATCGGCAAGAAT-GGATAAAAATATTCTAGAATGGTGT-GGAATGAATAGTGGTGGGACGTGTGGTAGGAAGCGAAAGGAAGGAGGTACACGGTAAACTCTTACCCCCAAAGCAAGTAATAAATGTAACGTAACACACACACACACACAATGTAACACCAAATCTGTATTCTGTAATACTAACAAAACCGCAAACC] [+] EMBL CNS08XZB [GTGCGTGCGTGCGTGCGGGCCCCGCCGTGGTCTCGAAGGATTGCCGGAACAGGGACCGGAAATGTGTGTGTGTGTGCGGTGTGTGCGCGCCTATGTGTGTGTGTTGTTTAGTGTAGCATATGCCAATTTCATTACTTTTAACGCTCTGTTGTGTTGTTTGTAATGCTCGAGGATGTGCAAAAACAAAAATATAAACTGCTCTCACTGCTATGCTACTAGATACACACACACTTACAAGAATTTCAAATAGAAATTAAATGCAACTACACGAGCTAAATAATACAAAGCACAACACCACCACAG AAAACACAAGCAGAAACACTACTACACCGCTTTGGTTTGATTTATCATATTATAACAACAACCCCGGTAGCAGGAGGAATGATTTTCCTACTCAACTCCCAACTACTCAACACTTAATAGCATAAACAGCTCTAA TAATCATTGCTCGATTGCTTATTCTGCTGCGCCTTCATCCACGCG CGCGCGCCCTCTGTTGGGTGTGATGGAAAACCGGGGGGAGTCCCCCAACTACATTTGCTACTAAAAGCGTATCATTCCTGCTGGGATCACACCTGCTTGGC ATTATGTTTTTTT TTGTAATTTGGTGAATCTTCATGTAAATAGCGGCATTATTAATAATACACACTAGCGGTAGAATTTGAATCTTATTTCAGTCTAGAGCAGTTAGAAGAGCGAGCGGGCATATTTAGCCCATTAGCACTAGAAAGAAGGTTTACTATGTTTGCTACACGAGAGTGTACTCGTGTGATGAGAGCATCATCATCTTACTCACATCTTTTGATATAGAATTGATCATTTGCGAGCGATCTAATCACAATCGAACCCGAACCTCGAACACAGCAGCACGTTATTCTCGAAATGTACACACAAGTATGCGTATATTGTAGCTTGAGTTTTGAGGGTAGCGGAAGGGGTACGTGTACTGATGAAGCAG ] [+] EMBL CNS09H76 [ GTTGTTTAGTGTAGCATATGCCAATTTCATTACTTTTAACGCTCTGTTGTGTTGTTTGTAATGCTCGAGGATGTGCAAAAACAAAAATATAAACTGCTCTCACTGCTATGCTACTAGATACACACACACTTACAAGAATTTCAAATAGAAATTAAATGCAACTACACGAGCTAAATAATACAAAGCACAACACCACCACAGAAAAACACAAGCAGAAACACTACTACACCGCTTTGGTTTGATTTATCATATTATAACAACAACCCCGGTAGCAGGAGGAATGATTTTCCTACTCAACTCTCAACTACTCAACACTTAATAGCATAAACAGCTCTAA TAATCATTGCTCGATTGCTTATTCTGCTGCGCCTTCATCCACGCG CTCGCGCCCTCTGTTGGGTGTGATGGAAAACCGGGGGGAGTCCCCCAACTACATTTGCTACTAAAAGCGTATCATTCCTGCCGGGATCACACCTGCTTGGCAATTATGTTTTTTT TTGTAATTTGGTGAATCTT ] [+] EMBL BX628869 [ AGCAGGAGGAATGATTTTTCTACTCAACTCTCAACTACTCAACACTTAATAGCATAAACAGCTCTAATAATCTCTAATCATTGCCCGATTGCTTTTTCTGCTGCGCCTTCATCCACGCGCCCGCGCGCCCTCTGATGGGTGTGATGG AAAGCGGGGGAAGT CCCCAACTACATTTGCTACTAAAAGCGTATCATTCCTGCTGGGATCACACCTGCTTGGC ATTATGTTTTTTTTGTTGTAATTTGGTGAATCTTCATGTAAATAGCGGCATTATTAATAATACACACTAGCGGTAGAATTTGAATCTTATTTCAGTTTAGAGCAGTTAGAAGAGCGCGCGGGCATATTTGGCCCATTAGCATTAGAAAGAAGGNTTACTATGTTTGCTACACGAGAGTGTACTCGTGTGATGAGTGCATCATCATCTTACTCACATCTTTTGATATAGAATTGATCATTTGCGAGCGATCTAATCACAATCGAACCCCAACCTCGAACACAGCAGCACGTTATTCTCGAAATGTACACACAAGTATGCGTAT ] [+] EMBL BX628870 [ cGCAGGAGGAATGATTTTTCTACTCAACTCTCAACTACTCAACACTTAATAGCATAAACAGCTCTAATAATCTCTAATCATTGCCCGATTGCTTTTTCTGCTGCGCCTTCATCCACGCGCCCNCGCGNCCTCTGATGGGTGTGATGG AAAGCGGGGGAAGT CCCCAACTACATTTGCTACTAAAAGCGTATCATTCCTGCTGGGATCACACCTGCTTGGC ATTATGTTTTTTTTGTTGTAATTTGGTGAATCTTCATGTAAATAGCGGCATTATTAATAATACACACTAGCGGTAGAATTTGAATCTTATTTCAGTTTAGAGCANTTAGAACAGCGCGCGGGNATATTTGGCCCATTAGCATTAGAAAGAAGGTTTACTATGTTTGCTACACGAGAGTGTACTCGTGTGATGAGTGCATCATCATCTTACTCACATCTTTTGATATAGAATTGATCATTTGCGAGCGATCTAATCAC ] [-] EMBL CNS08XZC [ TACTAAAAGCGTATCATTCCTGCTGGGATCACACCTGCTTGGC ATTATGTTTTTTT TTGTAATTTGGTGAATCTTCATGTAAATAGCGGCATTATTAATAATACACACTAGCGGTAGAATTTGAATCTTATTTCAGTCTAGAGCAGTTAGAAGAGCGAGCGGGCATATTTAGCCCATTAGCACTAGAAAGAAGGTTTACTATGTTTGCTACACGAGAGTGTACTCGTGTGATGAGAGCATCATCATCTTACTCACATCTTTTGATATAGAATTGATCATTTGCGAGCGATCTAATCACAATCGAACCCGAACCTCGAACACAGCAGCACGTTATTCTCGAAATGTACACACAAGTATGCGTATATTGTAGCTTGAGTTTTGAGGGTAGCGGAAGGGGTACGTGTACTGATGAAGCAGTAAATTATCAGTATCATTTGCCTAGGTATGGATAACCACTTTGCGGAATTATTTAGTTGTATAAGGGCGAGCGCGCGGTACAGGCATATATCACTGTAAGTTGCTGTAGCGGGCTAAT CTTAAACGCCGTAGTAATTGAACTCTCATTTTTATCCCTTTTTGACGTGCTGATGAATGCTAACTTTCCTGTAAATCGAACCATCGAGCTGCGAACGTGGTTGGATCTGTTGACGTGTGAAGCGTTTGTGTTTGCATCGGCAAGAAT GGATAAAAATATTCTAGAATGGTGT GGAATGAATAGTGGTGGGACGTGTGGTAGGAAGCGAAAGGAAGGAGGTACACGGTAAACTCTTACCCCCAAAGCAAGTAATAAATGTAACGTAACACACACACACACACAATGTAACACCAAATCTGTATTCTGTAATACTAACAAAACCGCAAACC] [-] EMBL CNS09H77 [ TAGGTATGGATAACCACTTTGCGGAATTATTTAGTTGTATAAGGGCGAGCGCGCGGTACAGGCATATATCACTGTAAGTTGCTGTAGCGGGCTAATGCTTAAACGCCGTAGTAATTGAACTCTCATTTTTATCCCTTTTTGACGTGCTGATGAATGCTAACTTTCCTGTAAATCGAACCATCGAGCTGCGAACGTGGTTGGATCTGTTGACGTGTGAAGCGTTTGTGTTTACATCGGCAAGAATGGGATAAAAATATTCTAGAATGGTGTGGGAATGAATAGTGGTGGGACGTGTGGTAGGAAGCGAAAGGAAGGAGGTACACGGTAAACTCTTACCCCCAAAGCAAGTAATAAATGTAACGTGACACACACAa ] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||