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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7123#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1369 fasta sequence
[CCGGGACGACGGTGGAAAGTGTAGTAAACCCGTGCGCGGAACGAATTATGTGACGAGGGAATTCCTTTCCTGAAAGGCGGCCACTTTTGTGAGCAGTTCATCGGTGGGGCGTTTTGTTTGCTTTGGGAGAATCTGCCCGGCCCAAACTCCAAACGCTCCAAAGCAAAGGAACGTAAATATTCACGGCACGTGTACGCTATCGTGTGTGTGTGCTTTACCGAGAACAACAAATTCGTTGTTTTACTTCCCGCGTGGATTTAAACACAATCGATGCTACTGTGAGTGGTTCCCGTCGTGTGTCCTCGTCCGCGTCATTCGAGAGCCAGCCACCATGAGGAACTACGTGCCAGACATCATCATTCTGTTCATCATCATCGTAACGATTACCGTCGTCCGGCTGGTATCGCAAATACTGCACGAAACGCTTGCCGATGGACCGCCGGAACTGGTGCTGCCGCCACCGGCCGAAGGGGCCGCACCGAGGCCCGAACTGTCCCTCAGCCAGCTGATCGATCAAAAGTCGAAAGAGTACTCGTGGCTGCTGCGCCTGCTCGTCAACCTGTTCGGCTACTTCTGCATCTTCATCCCGGGCGTGCTGATCTACAAGTATGCCAAGCGCACCAAGTACATGGAACGTTCGGACCGTTCCCATTTGTCCGCGCTGGTAAAGTTTTGCTACTCCGGCACGGGCACGGACGGTTTGGACCGGCCGCTGGATGGCCCGGCCGGGGCCGGTAAGGGATCGACCGGCAACAAGCGCACCACGGCCCAGGAGTGTGCCCTGCTCTGCTACTGTCTGGTGGGGCTGATGGGTTCCTACCTTACCTGGGGCGTGCTGCAGGAGAAAATAATGACCCAAGAGTACGAGGGGCCGGAGAAGCGCAAATCGCACTTCAAAGACTCCCAGTTTCTGGTGTTCTCGAACCGTGTGCTCGGCTTCCTGATAACGGCAGTGTATCTCGTGGCGAAGCGCCAGTTCCGGCACCGTGCCCCACTGTACAAGTATTCGTTCGCTTCGTTTTCCAACATCATGAGCGCCTGGTTCCAGTACGAGGCACTGAAGTTCGTCAACTTCCCCACCCAGGTGTTGGCGAAATCGTGCAAAATCATCCCGGTGATGATCATGGGCAAGATCATATCGCGCAATAAGTACGAGTTTTACGAGTACCTGACCGCGGTCATGATCTCCGTCGGTATGATCTTCTTCCTGACCGGCTCGACCGACGAGTCGAAAGCGTCCGCCATGACCACGCTGACCGGCGTGCTGCTGCTCACGTTCTACATGATCTTCGACAGCTTCACCTCGAACTGGCAGGGCGAGCTGTTCAAATCCTACTCGATGAGCTCGATACAGATGATGTGCGGGGTG]
[+] EMBL BM591835 [CCGGGACGACGGTGGAAAGTGTAGTAAACCCGTGCGCGGAACGAATTATGTGACGAGGGAATTCCTTTCCTGAAAGGCGGCCACTTTTGTGAGCAGTTCATCGGTGGGGCGTTTTGTTTGCTTTGGGAGAATCTGCCCGGCCCAAACTCCAAACGCTCCAAAGCAAAGGAACGTAAATATTCACGGCACGTGTACGCTATCGTGTGTGTGTGCTTTACCGAGAACAACAAATTCGTTGTTTTACTTCCCGCGTGGATTTAAACACAATCGATGCTACTGTGAGTGGTTCCCGTCGTGTGTCCTCGTCCGCGTCATTCGAGAGCCAGCCACCATGAGGAACTACGTGCCAGACATCATCATTCTGTTCATCATCATCGTAACGATTACCGTCGTCCGGCTGGTATCGCAAATACTGCACGAAACGCTTGCCGATGGACCGCCGGAACTGGTGCTGCCGCCACCGGCCGAAGGGGCCGCACCGAGGCCCGAACTGTCCCTCAGCCAGCTGATCGATCAAAAGTCGAAAGAGTACTCGTGGCTGCTGCGCCTGCTCGTCAACCTGTTCGGCTACTTCTGCATCTTCATCCCGGGCGTGCTGATCTACAAGTATGCCAAGCGCACCAAGTACATGGAACGTTCGGACCGTT ]
[+] EMBL BX612419 [ CGAAACGCTCGCCGATGGACCGCCTGAACTGGTGCTGCCGCCACCGGCCGAAGGGGCCGCACCGAGGCCCGAACTGTCCCTCAGCCAGCTGATCGATCAAAAGTCGAAAGAGTACTCGTGGCTGCTGCGCCTGCTCGTCAACCTGTTCGGCTACTTCTGCATCTTCATCCCGGGCGTGCTGATCTACAAGTATGCCAAGCGCACCAAGTACATGGAACGTTCGGACCGTTCCCATTTGTCCGCGCTGGTAAAGTTTTGCTACTCCGGCACGGGCACGGACGGTTTGGACCGGCCGCTGGATGGCCCGGCCGGGGCCGGTAAGGGATCGACCGGCAACAAGCGCACCACGGCCCAGGAGTGTGCCCTGCTCTGCTACTGTCTGGTGGGGCTGATGGGTTCCTACCTTACCTGGGGCGTGCTGCAGGAGAAAATAATGACCCAAGAGTACGAGGGGCCGGAGAAGCGCAAATCGCACTTCAAAGACTCCCAGTTTCTGGTGTTCTCGAACCGTGTGCTCGGCTTCCTGATAACGGCAGTGTATCTCGTGGCGAAGCGCCAGTTCCGGCACCGTGCCCCACTGTACAAGTATTCGTTCGCTTCGTTTTCCAACATCATGAGCGCCTGGTTCCAGTACGAGGCACTGAAGTTCGTCAACTTCCCCACCCAGGTGTTGGCGAAATCGTGCAAAATCATC ]
[+] EMBL BX617707 [ GCGCAAATCGCACTTCAAAGACTCCCAGTTTCTGGTGTTCTTGAACCGTGTGCTCGGCTTCCTGATAACGGCAGTGTATCTCGTGGCGAAGCGCCAGTTCCGGCACCGTGCCCCACTGTACAAGTATTCGTTCGCTTCGTTTTCCAACATCATGAGCGCCTGGTTCCAGTACGAGGCACTGAAGTTCGTCAACTTCCCCACCCAGGTGTTGGCGAAATCGTGCAAAATCATCCCGGTGATGATCATGGGCAAGATCATATCGCGCAATAAGTACGAGTTTTACGAGTACCTGACCGCGGTCATGATCTCCGTCGGTATGATCTTCTTCCTGACCGGCTCGACCGACGAGTCGAAAGCGTCCGCCATGACCACGCTGACCGGCGTGCTGCTGCTCACGTTCTACATGATCTTCGACAGCTTCACCTCGAACTGGCAGGGCGAGCTGTTCAAATCCTACTCGATGAGCTCGATACAGATGATGTGCGGGGTG]
consensusID : consensus_7123#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 982 fasta sequence
[GTGCTACATGAACTCCGACAGCTCCACCTCGAACGGGCAGGGCGAGCTGTTCAAATCCTACTCGATGAGCTCGATACAGAAGAAGTGCGGGGTGAACCTGTTCAGCACACGGTTCACCGGGGCGTCGCTCGCGATGCAGGGCGGCTGCTACAGCTCGCTCGTGTTTGCCGTCGACCATCCGAAGTTTGTGGTCGACTGTGTGGTGCTGTCGATCTCGTCCGCCATCGGGCAGCTGTTCATCTTCTACACGATCGCTACGTTTGGGGCGGTCGTGTTCACGATCATCATGACGCTCCGGCAGGCCGTTGCCATACTGCTGTCCTGCCTGATCTACCAGCACCGGATCTCGTTCCTCGGCGTGGTCGGTGTGCTGATCGTGTTTTTGGCCATCTTTCTCCGGGTGTACTGCAACCAGCGGCTAAAAGCGATCAAGCAACGGCACCAGAGCGCACAGGGCGGTGGTTCGGGCGGCAAACCGCGCATCAACGTCTAGGGGGGCGTGCCCGTTTTACTTAAGCTATAAGTAGCAGCAACAGTAACGGTAGCGGCGTTCATAGTTCATAGATTTGCATTTTACAATTTTAGTCGTTCGAATTTGTAGGCGAAATAGTTGCACCGACGACAGTAGCCAGTTTCGCCTGTGATCGCAGAATCCAATTTTCCGTTTCATCTACCCATAACCCCAGTTAGGATATAACGTTCCAATCCCAGGGCAGTCAGCTGTTCTGGGTGTTTTAGTTTTAGCGAGATAACAGATGTTTTATTTATAACGACATTTGGTGGACGCATCGAGAGCGCAGATGTGTCGCGATTGCGGAAGAGTAACCGAACCGATCAACGATCAACGCTTAAACGCTTGTTCTAACCAAAAAGAAAAAAAAAAGGAGTGACGATCGATCGACGATTGTGAATCGCGATCGTAATATGTATGTTTGTCCTGTGTGTATGTGTACCGTTTGGAAAGGCGATGAAATAAAATTGG]
[+] EMBL BX616415 [GTGCTACATGAACTCCGACAGCTCCACCTCGAACGGGCAGGGCGAGCTGTTCAAATCCTACTCGATGAGCTCGATACAGAAGAAGTGCGGGGTGAACCTGTTCAGCACACGGTTCACCGGGGCGTCGCTCGCGATGCAGGGCGGCTGC ]
[+] EMBL BX619012 [ AGCTCGATACAGATGATGTGCGGGGTGAACCTGTTCAGCACACTGTTCACCGGGGCGTCGCTCGCGATGCAGGGCGGCTTCTACAGCTCGCTCGTGTTTGCCGTCGACCATCCGAAGTTTGTGGTCGACTGTGTGGTGCTGTCGATCTCGTCCGCCATCGGGCAGCTGTTCATCTTCTACACGATCGCTACGTTTGGGGCGGTCGTGTTCACGATCATCATGACGCTCCGGCAGGCCGTTGCCATACTGCTGTCCTGCCTGATCTACCAGCACCGGATCTCGTTCCTCGGCGTGGTCGGTGTGCTGATCGTGTTTTTGGCCATCTTTCTCCGGGTGTACTGCAACCAGCGGCTAAAAGCGATCAAGCAACGGCACCAGAGCGCACAGGGCGGTGGTTCGGGCGGCAAACCGCGCATCAACGTCTAGGGGGGCGTGCCCGTTTTACTTAAGCTATAAGTAGCAGCAACAGTAACGGTAGCGGCGTTCATAGTTCATAGATTTGCATTTTA ]
[+] EMBL BX610248 [ AAAAGCGATCAAGCAACGGCACCAGAGCGCACAGGGCGGTGGTTCGGGCGGCAAACCGCGCATCAACGTCTAGGGGGGCGTGCCCGTTTTACTTAAGCTATAAGTAGCAGCAACAGTAACGGTAGCGGCGTTCATAGTTCATAGATTTGCATTTTACAATTTTAGTCGTTCGAATTTGTAGGCGAAATAGTTGCACCGACGACAGTAGCCAGTTTCGCCTGTGATCGCAGAATCCAATTTTCCGTTTCATCTACCCATAACCCCAGTTAGGATATAACGTTCCAATCCCAGGGCAGTCAGCTGTTCTGGGTGTTTTAGTTTTAGCGAGATAACAGATGTTTTATTTATAACGACATTTGGTGGACGCATCGAGAGCGCAGATGTGTCGCGATTGCGGAAGAGTAACCGAACCGATCAACGATCAACGCTTAAACGCTTGTTCTAACCAAAAAGAAAAAAAAAAGGAGTGACGATCGATCGACGATTGTGAATCGCGATCGTAATATGTATGTTTGTCCTGTGTGTATGTGTACCGTTTGGAAAGGCGATGAAATAAAATTGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7123#0 CCGGGACGACGGTGGAAAGTGTAGTAAACCCGTGCGCGGAACGAATTATGTGACGAGGGA 60
consensus_7123#1 ------------------------------------------------------------
consensus_7123#0 ATTCCTTTCCTGAAAGGCGGCCACTTTTGTGAGCAGTTCATCGGTGGGGCGTTTTGTTTG 120
consensus_7123#1 ------------------------------------------------------------
consensus_7123#0 CTTTGGGAGAATCTGCCCGGCCCAAACTCCAAACGCTCCAAAGCAAAGGAACGTAAATAT 180
consensus_7123#1 ------------------------------------------------------------
consensus_7123#0 TCACGGCACGTGTACGCTATCGTGTGTGTGTGCTTTACCGAGAACAACAAATTCGTTGTT 240
consensus_7123#1 ------------------------------------------------------------
consensus_7123#0 TTACTTCCCGCGTGGATTTAAACACAATCGATGCTACTGTGAGTGGTTCCCGTCGTGTGT 300
consensus_7123#1 ------------------------------------------------------------
consensus_7123#0 CCTCGTCCGCGTCATTCGAGAGCCAGCCACCATGAGGAACTACGTGCCAGACATCATCAT 360
consensus_7123#1 -GTGCTACATGAACTCCGACAGCT--CCACCTCGA------ACGGGCAGGGCGAG----- 46
* * * * * *** *** ***** ** *** ** * *
consensus_7123#0 TCTGTTCATCATCATCGTAACGATTACCGTCGTCCGGCTGGTATCGCAAATACTGCACGA 420
consensus_7123#1 -CTGTTCAA-ATCCTACT--CGATGAGCTCGATACAGAAG-------AAGTGCGGGGTGA 95
******* *** * * **** * * * * * * ** * * * **
consensus_7123#0 AACGCTT--GCCGATGGACCGCCGGAACTGGTGCTGCCGCCACCGGCCGAAGGGGCCGCA 478
consensus_7123#1 ACCTGTTCAGCACACGGTTCACCGGGGC-GTCGCTCGCGATGCAGGGCG--GCTGCTACA 152
* * ** ** * ** * **** * * *** ** * ** ** * ** **
consensus_7123#0 CCGAGGCCCGAACTGTCCCTCAGCCAGCTGATCGATCAAAAGTCGAAAGAGTACTCGTGG 538
consensus_7123#1 GCTCG-CTCGTGTTTGCCGTCGACCATCCGA--AGTTTGTGGTCGACTGTGTGGTGCTGT 209
* * * ** * ** ** *** * ** * ***** * ** * **
consensus_7123#0 CTGCTGCGCCTGC--TCGTCAACCTGTTCGGCTACTTCTGCATCTTCATCCCGGGCGTGC 596
consensus_7123#1 CGATCTCGTCCGCCATCGGGCAGCTGTTCATCTTCTACACGATCGCTACGTTTGGGGCGG 269
* ** * ** *** * ****** ** ** * *** * ** * *
consensus_7123#0 TGATCTACAAGTATGCCAAG-CGCACCAAGTACATGGAACGTTCGGACCGTTCCCATTTG 655
consensus_7123#1 TCGTGTTCACGATCATCATGACGCTCCGGCAGGCCGTTGCCATACTGCTGTCCTGCCTGA 329
* * * ** * ** * *** ** * * * * ** * *
consensus_7123#0 TCCGCGCTGGTAAAGTTTTGCTACTCCGGCACGGGCACGGACGGTTTGGACCGGCCGCTG 715
consensus_7123#1 TCTACCAGCACCGGATCTCGTT-CCTCGGCGTGGTC---GGTGTGCTGATCGTGTTTTTG 385
** * * * * * * **** ** * * * ** * * **
consensus_7123#0 GATGGCCCGGCCGGGGCCGGTAAGGGATCGACCGGCAACAAGCGCACCACGGCCCAGGAG 775
consensus_7123#1 GCCATCTTTCTCCGGGT--GTACTGCAACCAGCGGCTAAAAGCG-ATCAAGCAACGGCAC 442
* * * *** *** * * * * **** * ***** * ** * * * *
consensus_7123#0 TGTGCCCTGCTCTGCTACTGTCTGGTGGGGCTGATGGGTTCCTACCTTACCTGGGGCGTG 835
consensus_7123#1 CAGAGCGCACAGGGCGGTGGTTCGGGCGGCAAACCGCGCATCAACGTCTAGGGGGGCGTG 502
* * ** ** ** ** * * * ** * ********
consensus_7123#0 CTGCAGGAGAAAATAATGACCCAAGAGTACGAGGGGCCGGAGAAGCGCAAATCGCACTTC 895
consensus_7123#1 C--CCGTTTTACTTAAGCTATAAGTAGCAGCAACAGTAACGGTAGCGGCGTTCATAGTTC 560
* * * * *** * ** * * * * **** ** * ***
consensus_7123#0 AAAGACTCCCAGTTTCTGGTGTTCTCGAACCGTGTGCTCGGCTTCCTGATAACGGCAGTG 955
consensus_7123#1 ATAGATTTGCATTTTACAATTTT----AGTCGT----TCGAATTTGTAGGCGAAATAGT- 611
* *** * ** *** * ** * *** *** ** * ***
consensus_7123#0 TATCTCGTGGCGAAGCGCCAGTTCCGGCACCGTGCCCCACTGTACAAGTATTCGTTCGCT 1015
consensus_7123#1 TGCACCGACGACAGTAGCCAGTTTCGCCTGTG-ATCGCAGAATCCAATTTTCCGTTTCAT 670
* ** * * ******* ** * * * ** * *** * * **** *
consensus_7123#0 TCGTTTTCCAACATCATGAGCGCCTG--GTTCCAGTACGAGGCACTGAAGTTCGTCAACT 1073
consensus_7123#1 CTACCCATAACCCCAGTTAGGATATAACGTTCCAATCCCAGG----GCAGTCAGCTGTTC 726
* * * ** * ****** * * *** * *** *
consensus_7123#0 TCCCCACCCAGGTGTTGGCGAAATCGTGCAAAATCATCCCGGTGATGATCATGGGCAAGA 1133
consensus_7123#1 TGGGTGTTTTAGTTTTAGCGAGATAACA-GATGTTTTATTTATAACGACATTTGGTGGA- 784
* ** ** **** ** * * * * * ** * **
consensus_7123#0 TCATATCGCGCAATAAGTACGAGTTTTACGAGTACCTGACCGCGGTCATGATCTCCGTCG 1193
consensus_7123#1 -CGCATCG---AGAGCGCAGATGTGTCGCGATTGCGGAAGAGTAACCGAACCGATCAACG 840
* **** * * * ** * *** * * * * * * **
consensus_7123#0 GTATGATCTTCTTCCTGACCGGCTCGACCGACGAGTCGAAAGCGTCCGCCATGACCACGC 1253
consensus_7123#1 --ATCAACGCTTAAACGCTTGTTCTAACCAAAAAGAAAAAAAAAA--GGAGTGACGA--T 894
** * * * * * *** * ** *** * **** *
consensus_7123#0 TGACCGGCGTGCTGCTGCTCACGTTCTACATGATCTTCGACAGCTTCACCTCGAACTGGC 1313
consensus_7123#1 CGATCGACG-ATTGTGAATCGCGATC---GTAATAT---GTATGTTTGTCCTG---TGTG 944
** ** ** ** ** ** ** * ** * * ** * * **
consensus_7123#0 AGGGCGAGCTGTTCAAATCCTACTCGATGAGCTCGATACAGATGATGTGCGGGGTG 1369
consensus_7123#1 TATGTGTACCGTTTGGAA---AGGCGATGAAATAAAATTGG--------------- 982
* * * *** * * ****** * * *
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||