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Anopheles gambiae
cluster # 7124 cluster # 7124       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7124#0 length = 1209 sequences # 5  
consensus_7124#1 length = 570 sequences # 1  

consensusID : consensus_7124#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1209
fasta sequence
                              [CCGCCCACGCGTCCGAAAGACCCTTGCCTTCGGTATACCGATGCTAGAAGGTATCATGCGTCTGAAGAAGGGCAAGAAACCGGTGGCAGACGATTCGAGCGAGCACGAAATGACGCCTCCACCGGAAGATATGGAAGTCACGGAGGAGGATGCAAAGGTGTTCGCAGAGGAGGGTCGTAAGCTGGGCAATTCGTCAGCCGCCCCTGAAGACAAACCCTTGTACGGGTTAATCCTTACACCGACTCGTGAATTAGCGGTACAGATTAACGATCATCTGAAGGCGGTCGCTAAGTATACCGACATTAACATTGCGACCGTGTTCGGTGGTTTGGCCACGGTGAAGCAGGAACGCATGCTGCGCAAATGTCCGGAGATAGTGATCGCAACGCCGGGTCGGCTGTGGGAGCTGGTCAAGAGTGAAAATCATCACCTTTCCAAGGTGACAGACATCAGATATCTCGTTATCGATGAAACAGATCGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGACCATGAGATGCCTACTCATATAAAACGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTTCTCGATCGTCATCCCGGTCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAACGGCTCGTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTGGTTTGGACATTCCGAACGTGGACCACGTCATCCACTATCAGGTGCCGAAGACGACGGAAAACTATGTGCACCGTTCGGGGCGTACGGCACGCGCAAGCAAGGAAGGTTTGACGGTGCTGCTGATTGGACCGTCCGANGTGAGGGACTACGTTAAGCTGAACCAAGATTTGGGCCGCACGGAGGATCTGCCACT]

[+] EMBL BM622002             [CCGCCCACGCGTCCGAAAGACCCTTGCCTTCGGTATACCGATGCTAGAAGGTATCATGCGTCTGAAGAAGGGCAAGAAACCGGTGGCAGACGATTCGAGCGAGCACGAAATGACGCCTCCACCGGAAGATATGGAAGTCACGGAGGAGGATGCAAAGGTGTTCGCAGAGGAGGGTCGTAAGCTGGGCAATTCGTCAGCCGCCCCTGAAGACAAACCCTTGTACGGGTTAATCCTTACACCGACTCGTGAATTAGCGGTACAGATTAACGATCATCTGAAGGCGGTCGCTAAGTATACCGACATTAACATTGCGACCGTGTTCGGTGGTTTGGCCACGGTGAAGCAGGAACGCATGCTGCGCAAATGTCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX627494             [                                                                                                                                                                                                                                                                                                                          CCGTGTTCGGTGGTTTGGCCACGGTGAAGCAGGAACGCATGCTGCGCAAATGTCCGGAGATAGTGATCGCAACGCCGGGTCGGCTGTGGGAGCTGGTCAAGAGTGAAAATCATCACCTTTCCAAGGTGACAGACATCAGATATCTCGTTATCGATGAAACAGATCGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGACCATGAGATGCCTACTCATATAAAACGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTTCTCGATCGTCATCCCGGTCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAACGGCTCGTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTGGTTTGGACATTCCGAACGTGGACCACGTCA                                                                                                                                                                   ]
[+] EMBL BX620838             [                                                                                                                                                                                                                                                                                                                                                                                                           GGCTGTGGGAGCTGGTTAAGAGTGAAAATCATCACCTTTCCAAGGTGGCAGACATCAGATATCTCGTTATCGATGAAACAGATCGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGACGGACCATGAGATGCCTACTCATATAAAAAGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTCCTCGATCGTCATCCCGGGCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAGCGGCTCGTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTGGTTTGGACATTNCGAACGTGGACCACGTCA                                                                                                                                                                   ]
[+] EMBL BM611027             [                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgATCACCTTTCCAAGGTGACAGACATCAGATATCTCGTTATCGATGAAACAGATCGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGACCATGAGATGCCTACTCATATAAAACGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTTCTCGATCGTCATCCCGGTCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAACGGCTCGTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCA                                                                                                                                                                                                                                      ]
[+] EMBL BX620066             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGACCATGAGATGCCTACTCATATAAAAAGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTCCTCGATCGTCATCCCGGTCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAGCGGCTCGTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTGGTTTGGACATTCCGAACGTGGACCACGTCATCCACTATCAGGTGCCGAAGACGACGGAAAACTATGTGCACCGTTCGGGGCGTACGGCACGCGCAAGCAAGGAAGGTTTGACGGTGCTGCTGATTGGACCGTCCGANGTGAGGGACTACGTTAAGCTGAACCAAGATTTGGGCCGCACGGAGGATCTGCCACT]


>consensus_7124#0 CCGCCCACGCGTCCGAAAGACCCTTGCCTTCGGTATACCGATGCTAGAAGGTATCATGCG TCTGAAGAAGGGCAAGAAACCGGTGGCAGACGATTCGAGCGAGCACGAAATGACGCCTCC ACCGGAAGATATGGAAGTCACGGAGGAGGATGCAAAGGTGTTCGCAGAGGAGGGTCGTAA GCTGGGCAATTCGTCAGCCGCCCCTGAAGACAAACCCTTGTACGGGTTAATCCTTACACC GACTCGTGAATTAGCGGTACAGATTAACGATCATCTGAAGGCGGTCGCTAAGTATACCGA CATTAACATTGCGACCGTGTTCGGTGGTTTGGCCACGGTGAAGCAGGAACGCATGCTGCG CAAATGTCCGGAGATAGTGATCGCAACGCCGGGTCGGCTGTGGGAGCTGGTCAAGAGTGA AAATCATCACCTTTCCAAGGTGACAGACATCAGATATCTCGTTATCGATGAAACAGATCG AATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCCAA CGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGACCA TGAGATGCCTACTCATATAAAACGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAAC GCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGT CGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCA GATGGAGCACAAAGACTTTTATCTGTACTACTTTCTCGATCGTCATCCCGGTCGAACGCT CGTGTTCTGCAACTCGATCGACTGCGTGAAACGGCTCGTTTCTCTGTTCGACTATCTGAA CTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGA GCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTGGTTT GGACATTCCGAACGTGGACCACGTCATCCACTATCAGGTGCCGAAGACGACGGAAAACTA TGTGCACCGTTCGGGGCGTACGGCACGCGCAAGCAAGGAAGGTTTGACGGTGCTGCTGAT TGGACCGTCCGANGTGAGGGACTACGTTAAGCTGAACCAAGATTTGGGCCGCACGGAGGA TCTGCCACT



consensusID : consensus_7124#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 570
fasta sequence
                              [ATCGGCCAGGCTNTATTATCGATGAAACAGATCGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGACCATGAGATGCCTACTCATATAAAAAGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTCCTCGATCGTCATCCCGGTCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAGCGGCTCCTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTG]

[+] EMBL AL932850             [ATCGGCCAGGCTNTATTATCGATGAAACAGATCGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGACCATGAGATGCCTACTCATATAAAAAGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTCCTCGATCGTCATCCCGGTCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAGCGGCTCCTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTG]


>consensus_7124#1 ATCGGCCAGGCTNTATTATCGATGAAACAGATCGAATGCTGGAAAAGGGACACTTTGAGG AGCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGA ACTATATCTTCTCTGCCACGCTTACGATGGACCATGAGATGCCTACTCATATAAAAAGAC ATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAA TCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTG CTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGT ACTACTTCCTCGATCGTCATCCCGGTCGAACGCTCGTGTTCTGCAACTCGATCGACTGCG TGAAGCGGCTCCTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAA GCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCACGGGCAC TGCTGATTGCGACCGATGTAGCCGCGCGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7124#0      CCGCCCACGCGTCCGAAAGACCCTTGCCTTCGGTATACCGATGCTAGAAGGTATCATGCG 60
consensus_7124#1      ------------------------------------------------------------
                                                                                  

consensus_7124#0      TCTGAAGAAGGGCAAGAAACCGGTGGCAGACGATTCGAGCGAGCACGAAATGACGCCTCC 120
consensus_7124#1      ------------------------------------------------------------
                                                                                  

consensus_7124#0      ACCGGAAGATATGGAAGTCACGGAGGAGGATGCAAAGGTGTTCGCAGAGGAGGGTCGTAA 180
consensus_7124#1      ------------------------------------------------------------
                                                                                  

consensus_7124#0      GCTGGGCAATTCGTCAGCCGCCCCTGAAGACAAACCCTTGTACGGGTTAATCCTTACACC 240
consensus_7124#1      ------------------------------------------------------------
                                                                                  

consensus_7124#0      GACTCGTGAATTAGCGGTACAGATTAACGATCATCTGAAGGCGGTCGCTAAGTATACCGA 300
consensus_7124#1      ------------------------------------------------------------
                                                                                  

consensus_7124#0      CATTAACATTGCGACCGTGTTCGGTGGTTTGGCCACGGTGAAGCAGGAACGCATGCTGCG 360
consensus_7124#1      ------------------------------------------------------------
                                                                                  

consensus_7124#0      CAAATGTCCGGAGATAGTGATCGCAACGCCGGGTCGGCTGTGGGAGCTGGTCAAGAGTGA 420
consensus_7124#1      ------------------------------------------------------------
                                                                                  

consensus_7124#0      AAATCATCACCTTTCCAAGGTGACAGACATCAGATA--TCTCGTTATCGATGAAACAGAT 478
consensus_7124#1      ----------------------------ATCGGCCAGGCTNTATTATCGATGAAACAGAT 32
                                                  *** *  *       *****************

consensus_7124#0      CGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCC 538
consensus_7124#1      CGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCC 92
                      ************************************************************

consensus_7124#0      AACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGAC 598
consensus_7124#1      AACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGAC 152
                      ************************************************************

consensus_7124#0      CATGAGATGCCTACTCATATAAAACGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTA 658
consensus_7124#1      CATGAGATGCCTACTCATATAAAAAGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTA 212
                      ************************ ***********************************

consensus_7124#0      ACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATC 718
consensus_7124#1      ACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATC 272
                      ************************************************************

consensus_7124#0      GTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGC 778
consensus_7124#1      GTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGC 332
                      ************************************************************

consensus_7124#0      CAGATGGAGCACAAAGACTTTTATCTGTACTACTTTCTCGATCGTCATCCCGGTCGAACG 838
consensus_7124#1      CAGATGGAGCACAAAGACTTTTATCTGTACTACTTCCTCGATCGTCATCCCGGTCGAACG 392
                      *********************************** ************************

consensus_7124#0      CTCGTGTTCTGCAACTCGATCGACTGCGTGAAACGGCTCGTTTCTCTGTTCGACTATCTG 898
consensus_7124#1      CTCGTGTTCTGCAACTCGATCGACTGCGTGAAGCGGCTCCTTTCTCTGTTCGACTATCTG 452
                      ******************************** ****** ********************

consensus_7124#0      AACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTG 958
consensus_7124#1      AACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTG 512
                      ************************************************************

consensus_7124#0      GAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTGGT 1018
consensus_7124#1      GAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTG-- 570
                      **********************************************************  

consensus_7124#0      TTGGACATTCCGAACGTGGACCACGTCATCCACTATCAGGTGCCGAAGACGACGGAAAAC 1078
consensus_7124#1      ------------------------------------------------------------
                                                                                  

consensus_7124#0      TATGTGCACCGTTCGGGGCGTACGGCACGCGCAAGCAAGGAAGGTTTGACGGTGCTGCTG 1138
consensus_7124#1      ------------------------------------------------------------
                                                                                  

consensus_7124#0      ATTGGACCGTCCGANGTGAGGGACTACGTTAAGCTGAACCAAGATTTGGGCCGCACGGAG 1198
consensus_7124#1      ------------------------------------------------------------
                                                                                  

consensus_7124#0      GATCTGCCACT 1209
consensus_7124#1      -----------
                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)