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Anopheles gambiae
cluster # 7191 cluster # 7191       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7191#0 length = 1048 sequences # 2  
consensus_7191#1 length = 673 sequences # 4  

consensusID : consensus_7191#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1048
fasta sequence
                              [CCGGTTGATCTTCGTCTGGCTTCAGTTGCTACAGACGCGAATTGCTCGCAATGTAATTGACGTGGCGGGCGTGCGTGCGTGCTTGGTTCAGTGTTCGCATACGAAGAAGTTCCACATTCCAGCACAGGTGGCCACTTTCTCCAAGAAGGTGGTGCTTCCGGCGGTGGTGCCCGGTTAATTTGCAGTGACTGTGTTCGAAATCTCGATCTAATCAGTGTATAAGGAATACAAAAAAGACAGATGAGTTACGCTATACGCAGGCTGCTCCGTGCAGCCATGTGCGTGTTTAGCTGGTTCGTCATGCCCTACTCGCAGTGCGTTAGCGGTCGGATAGAGCGCCGCAAGCTCCCACCAATCGAAGATCCGCTGCTGCTCCTGTCGGCCACCGTGCTTGCCGAGCGCATCCGCAAGCGCGAGATACGCAGCGAGGACGTAGTCCGTGCGTACATCCAACGGTGCCAGCAGGTCAACCCACTGCTAAACGCCATCGTCGAGGATCGTTTCGAAGCCGCACTGGAAGAGGCCCAGGAAGTCGACCGTCAGCTGGCGAAGGGTACGCTCGGACCCGCGGAAGAGTTAGCTCGCACCAAACCCCTGCTCGGACTGCCGGTTTCGATCAAGGAAAGCTTAGCCGTCGAGGGCATGAGCAACACGGCCGGTCGAAAGCTGCGCGAAAAGAAGGTCGCACTCAGTGATGCGCCCGTCGTGCACCAGATTAAGCGGGCCGGTGGCATTGTGCTGCTCGTAAGCAACACGCCCGAACTGTGCCTGTGCTGGGAAACGTACAACCAGTGCACGGGTCTAACGCGCAACCCGTACAACCTGCAGCGTACTGCGGGCGGATCGTCCGGCGGTGAGGCCGCACTGATTGCGGCGGCCGGATCGCTGCTCGGCGTTACGACCGATATAGCCGGCTCTTCGCGCCTACCAGCCATGTTTACTGGTGTGTTTGGCCATAAACCTTCACCGGTACGTGGTGTCACCGTACGGGCACCATCCGTCCTGTGACGATGAGAACTGGGGCAGCTTCTTCACGCCCGGCGCCATG]

[+] EMBL BM610353             [CCGGTTGATCTTCGTCTGGCTTCAGTTGCTACAGACGCGAATTGCTCGCAATGTAATTGACGTGGCGGGCGTGCGTGCGTGCTTGGTTCAGTGTTCGCATACGAAGAAGTTCCACATTCCAGCACAGGTGGCCACTTTCTCCAAGAAGGTGGTGCTTCCGGCGGTGGTGCCCGGTTAATTTGCAGTGACTGTGTTCGAAATCTCGATCTAATCAGTGTATAAGGAATACAAAAAAGACAGATGAGTTACGCTATACGCAGGCTGCTCCGTGCAGCCATGTGCGTGTTTAGCTGGTTCGTCATGCCCTACTCGCAGTGCGTTAGCGGTCGGATAGAGCGCCGCAAGCTCCCACCAATCGAAGATCCGCTGCTGCTCCTGTCGGCCACCGTGCTTGCCGAGCGCATCCGCAAGCGCGAGATACGCAGCGAGGACGTAGTCCGTGCGTACATCCAACGGTGCCAGCAGGTCAACCCACTGCTAAACGCCATCGTCGAGGATCGTTTCGAAGCCGCACTGGAAGAGGCCCAGGAAGTCGACCGTCAGCTGGCGAAGGGTACGCTCGGACCCGCGGAAGAGTTAGCTCGCACCAAACCCCTGCTCGGACTGCCGGTTTCGATCAAGGAAAGCTTAGCCGTCGAGGGCATGAGCAACACGGCCGGTCGAAAG                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM607869             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccGGTCAACCCACTGCTAAACGCCATCGTCGAGGATCGTTTCGAAGCCGCACTGGAAGAGGCCCAGGAAGTCGACCGTCAGCTGGCGAAGGGTACGCTCGGACCCGCGGAAGAGTTAGCTCGCACCAAACCCCTGCTCGGACTGCCGGTTTCGATCAAGGAAAGCTTAGCCGTCGAGGGCATGAGCAACACGGCCGGTCGAAAGCTGCGCGAAAAGAAGGTCGCACTCAGTGATGCGCCCGTCGTGCACCAGATTAAGCGGGCCGGTGGCATTGTGCTGCTCGTAAGCAACACGCCCGAACTGTGCCTGTGCTGGGAAACGTACAACCAGTGCACGGGTCTAACGCGCAACCCGTACAACCTGCAGCGTACTGCGGGCGGATCGTCCGGCGGTGAGGCCGCACTGATTGCGGCGGCCGGATCGCTGCTCGGCGTTACGACCGATATAGCCGGCTCTTCGCGCCTACCAGCCATGTTTACTGGTGTGTTTGGCCATAAACCTTCACCGGTACGTGGTGTCACCGTACGGGCACCATCCGTCCTGTGACGATGAGAACTGGGGCAGCTTCTTCACGCCCGGCGCCATG]


>consensus_7191#0 CCGGTTGATCTTCGTCTGGCTTCAGTTGCTACAGACGCGAATTGCTCGCAATGTAATTGA CGTGGCGGGCGTGCGTGCGTGCTTGGTTCAGTGTTCGCATACGAAGAAGTTCCACATTCC AGCACAGGTGGCCACTTTCTCCAAGAAGGTGGTGCTTCCGGCGGTGGTGCCCGGTTAATT TGCAGTGACTGTGTTCGAAATCTCGATCTAATCAGTGTATAAGGAATACAAAAAAGACAG ATGAGTTACGCTATACGCAGGCTGCTCCGTGCAGCCATGTGCGTGTTTAGCTGGTTCGTC ATGCCCTACTCGCAGTGCGTTAGCGGTCGGATAGAGCGCCGCAAGCTCCCACCAATCGAA GATCCGCTGCTGCTCCTGTCGGCCACCGTGCTTGCCGAGCGCATCCGCAAGCGCGAGATA CGCAGCGAGGACGTAGTCCGTGCGTACATCCAACGGTGCCAGCAGGTCAACCCACTGCTA AACGCCATCGTCGAGGATCGTTTCGAAGCCGCACTGGAAGAGGCCCAGGAAGTCGACCGT CAGCTGGCGAAGGGTACGCTCGGACCCGCGGAAGAGTTAGCTCGCACCAAACCCCTGCTC GGACTGCCGGTTTCGATCAAGGAAAGCTTAGCCGTCGAGGGCATGAGCAACACGGCCGGT CGAAAGCTGCGCGAAAAGAAGGTCGCACTCAGTGATGCGCCCGTCGTGCACCAGATTAAG CGGGCCGGTGGCATTGTGCTGCTCGTAAGCAACACGCCCGAACTGTGCCTGTGCTGGGAA ACGTACAACCAGTGCACGGGTCTAACGCGCAACCCGTACAACCTGCAGCGTACTGCGGGC GGATCGTCCGGCGGTGAGGCCGCACTGATTGCGGCGGCCGGATCGCTGCTCGGCGTTACG ACCGATATAGCCGGCTCTTCGCGCCTACCAGCCATGTTTACTGGTGTGTTTGGCCATAAA CCTTCACCGGTACGTGGTGTCACCGTACGGGCACCATCCGTCCTGTGACGATGAGAACTG GGGCAGCTTCTTCACGCCCGGCGCCATG



consensusID : consensus_7191#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 673
fasta sequence
                              [CCGCGCATTTGGCTATTAGACTCGTTTCTGTTTGCCGGCATCGTCGTCAGGTCCTCCACAGGAAGCAAGGCTCC--GGGAACAGCGCGGTTGGGAGCAGACAGTATTAAATGTGCATTTCCATCCCGCACGAAGCGACCGCAGGAAGCATACGCCAGTGTGACAATGCAATTCAAGCCGGAATCATCCCCAATAATGAGTTCGCCGCTGAAAGCGCTGGTCGAGTTTCTGCGGCTCATCTACGCCAAGTGCTACCGTAAGGTGGTCCGAGAATGCAACCA---------ACAGATGAGTTACGCTATACGCAGGCTGCTCCGTGCAGCCATGTGCGTGTTTAGCTGGTTCGTCATGCCCTACTCGCAGTGCGTTAGCGGTCGGATAGAGCGCCGCAAGCTCCCACCAATCGAAGATCCGCTGCTGCTCCTGTCGGCCACCGTGCTTGCCGAGCGCATCCGCAAGCGCGAGATACGCAGCGAGGACGTAGTCCGTGCGTACATCCAACGGTGCCAGCAGGTCAACCCACTGCTAAACGCCATCGTCGAGGATCGTTTCGAAGCCGCACTGGAAGAGGCCCAGGAAGTCGACCGTCAGCTGGCGAAGGGTACGCTCGGACCCCGCGGAAGAGTTAGCTCGCACCAAACCCCTGCTCGGACTGCCGGTTTCGATCAAGGAAAGCTTA]

[+] EMBL BM586620             [CCGCGCATTTGGCTATTAGACTCGTTTCTGTTTGCGCGCATCGTCGTCAGGTCCTCCACAGGAAGCAAGGCTCC  GGGAACAGCGCGGTTGGGAGCAGACAGTATTAAATGTGCATTTCCATCCCGCACGAAGCGACCGCAGGAAGCATACGCCAGTGTGACAATGCAATTCAAGCCGGAATCATCCCCAATAATGAGTTCGCCGCTGAAAGCGCTGGTCGATTTTCTGCGGCTCATCTACGCCAAGTGCTACCGTAAGGTGGTCCGAGAATGCAACCA         ACAGATGAGTTACGCTATACGCAGGCTGCTCCGTGCAGCCATGTGCGTGTTTAGCTGGTTCGTCATGCCCTACTCGCAGTGCGTTAGCGGTCGGATAGAGCGCCGCAAGCTCCCACCAATCGAAGATCCGCTGCTGCTCCTGTCGGCCACCGTGCTTGCCGAGCGCATCCGCAAGCGCGAGATACGCAGCGAGGACGTAGTCCGTGCGTACATCCAACGGTGCCAGCAGGTCAACCCACTGCTAAACGCCATCGTCGAGGATCGTTTCGAAGCCG                                                                                                                        ]
[+] EMBL BM648818             [                                  CCGGCATCGTCGTCAGGTCCTCCACAGGAAGCAAGGCTCCAAGGGAACAGCGCGGTTGGGAGCAGACAGTATTAAATGTGCATTTCCATCCCGCACGAAGCGACCGCAGGAAGCATACGCCAGTGTGACAATGCAATTCAAGCCGGAATCATCCCCAATAATGAGTTCGCCGCTGAAAGCGCTGGTCGAGTTTCTGCGGCTCATCTACGCCAAGTGCTACCGTAAGGTGGTCCGAGAATGCAACCACTTCCACAGACAGATGAGTTACGCTATACGCAGGCTGCTCCGTGCAGCCATGTGCGTGTTTAGCTGGTTCGTCATGCCCTACTCGCAGTGCGTTAGCGGTCGGATAGAGCGCCGCAAGCTCCCACCAATCGAGGATCCGCTGCTGCTCCTGTCGGCCACCGTGCTTGCCGAGCGCATCCGCAAGCGCGAGATACGCAGCGAGGACGTGGTCCGTGCGTACATCCAGCGGTGCCAGCAGGTCAACCCGCTGCTAAACGCCATCGTCGAGGATCGTTTCGAAGCCGCACTGGAAGAGGCCCAGGAAGTCGACCGTCAGCTGGCGAAGGGTACGCTCGGACCCCGCGGAAGAGTTAGCT                                                ]
[+] EMBL BM649198             [                                  CCGGCATCGTCGTCAGGTCCTCCACAGGAAGCAAGGCTCCAAGGGAACAGCGCGGTTGGGAGCAGACAGTATTAAATGTGCATTTCCATCCCGCACGAAGCGACCGCAGGAAGCATACGCCAGTGTGACAATGCAATTCAAGCCGGAATCATCCCCAATAATGAGTTCGCCGCTGAAAGCGCTGGTCGAGTTTCTGCGGCTCATCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM650218             [                                                                 ccgGGCTCC  GGGAACAGCGCGGTTGGGAGCAGACAGTATTAAATGTGCATTTCCATCCCGCACGAAGCGACCGCAGGAAGCATACGCCAGTGTGACAATGCAATTCAAGCCGGAATCATCCCCAATAATGAGTTCGCCGCTGAAAGCGCTGGTCGAGTTTCTGCGGCTCATCTACGCCAAGTGCTACCGTAAGGTGGTCCGAGAATGCAACCA         ACAGATGAGTTACGCTATACGCAGGCTGCTCCGTGCAGCCATGTGCGTGTTTAGCTGGTTCGTCATGCCCTACTCGCAGTGCGTTAGCGGTCGGATAGAGCGCCGCAAGCTCCCACCAATCGAAGATCCGCTGCTGCTCCTGTCGGCCACCGTGCTTGCCGAGCGCATCCGCAAGCGCGAGATACGCAGCGAGGACGTAGTCCGTGCGTACATCCAACGGTGCCAGCAGGTCAACCCACTGCTAAACGCCATCGTCGAGGATCGTTTCGAAGCCGCACTGGAAGAGGCCCAGGAAGTCGACCGTCAGCTGGCGAAGGGTACGCTCGGA CCCGCGGAAGAGTTAGCTCGCACCAAACCCCTGCTCGGACTGCCGGTTTCGATCAAGGAAAGCTTA]


>consensus_7191#1 CCGCGCATTTGGCTATTAGACTCGTTTCTGTTTGCCGGCATCGTCGTCAGGTCCTCCACA GGAAGCAAGGCTCCGGGAACAGCGCGGTTGGGAGCAGACAGTATTAAATGTGCATTTCCA TCCCGCACGAAGCGACCGCAGGAAGCATACGCCAGTGTGACAATGCAATTCAAGCCGGAA TCATCCCCAATAATGAGTTCGCCGCTGAAAGCGCTGGTCGAGTTTCTGCGGCTCATCTAC GCCAAGTGCTACCGTAAGGTGGTCCGAGAATGCAACCAACAGATGAGTTACGCTATACGC AGGCTGCTCCGTGCAGCCATGTGCGTGTTTAGCTGGTTCGTCATGCCCTACTCGCAGTGC GTTAGCGGTCGGATAGAGCGCCGCAAGCTCCCACCAATCGAAGATCCGCTGCTGCTCCTG TCGGCCACCGTGCTTGCCGAGCGCATCCGCAAGCGCGAGATACGCAGCGAGGACGTAGTC CGTGCGTACATCCAACGGTGCCAGCAGGTCAACCCACTGCTAAACGCCATCGTCGAGGAT CGTTTCGAAGCCGCACTGGAAGAGGCCCAGGAAGTCGACCGTCAGCTGGCGAAGGGTACG CTCGGACCCCGCGGAAGAGTTAGCTCGCACCAAACCCCTGCTCGGACTGCCGGTTTCGAT CAAGGAAAGCTTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7191#0      ----------------------------------CCGGTTGATCTTCGTCTGG--CTTCA 24
consensus_7191#1      CCGCGCATTTGGCTATTAGACTCGTTTCTGTTTGCCGGC--ATCGTCGTCAGGTCCTCCA 58
                                                        ****   *** ***** **  ** **

consensus_7191#0      GTTGCTACAGA----CGCGAATTGCTCGCAATGTAATTGAC-GTGGCGGGCGTGCGTGCG 79
consensus_7191#1      CAGGAAGCAAGGCTCCGGGAACAGCGCGGTTGGGAGCAGACAGTATTAAATGTGCATTTC 118
                         *   **      ** ***  ** **    * *   *** **       **** *   

consensus_7191#0      TGCTTGGTTCAGTGTTCGCATACGAAGAA-------GTTCCACATTCCAGCACAGGTGGC 132
consensus_7191#1      CATCCCGCACGAAGCGACCGCAGGAAGCATACGCCAGTGTGACAATGCAATTCAAGCCGG 178
                            *  *   *    *  * **** *       **   *** * **   ** *  * 

consensus_7191#0      CACTTTCTCCAAGAAGGTGGT-GCTTCCGGCGGTGGTGCCCGGTTAATTTGCAGTGACTG 191
consensus_7191#1      AATCATCCCCAATAATGAGTTCGCCGCTGAAAGCGCTGGTCGAGTT-TCTGCGGCTCATC 237
                       *   ** **** ** * * * **  * *   * * **  **  *  * *** *    * 

consensus_7191#0      TGTTCGAAATCTCGATCTAATCAGTGTATAAGGAATACAAAAAAGACAGATGAGTTACGC 251
consensus_7191#1      TACGCCAAGTGCTACCGTAA--GGTGGTCCGAGAATGCAACCAA--CAGATGAGTTACGC 293
                      *   * ** *       ***   ***      **** ***  **  **************

consensus_7191#0      TATACGCAGGCTGCTCCGTGCAGCCATGTGCGTGTTTAGCTGGTTCGTCATGCCCTACTC 311
consensus_7191#1      TATACGCAGGCTGCTCCGTGCAGCCATGTGCGTGTTTAGCTGGTTCGTCATGCCCTACTC 353
                      ************************************************************

consensus_7191#0      GCAGTGCGTTAGCGGTCGGATAGAGCGCCGCAAGCTCCCACCAATCGAAGATCCGCTGCT 371
consensus_7191#1      GCAGTGCGTTAGCGGTCGGATAGAGCGCCGCAAGCTCCCACCAATCGAAGATCCGCTGCT 413
                      ************************************************************

consensus_7191#0      GCTCCTGTCGGCCACCGTGCTTGCCGAGCGCATCCGCAAGCGCGAGATACGCAGCGAGGA 431
consensus_7191#1      GCTCCTGTCGGCCACCGTGCTTGCCGAGCGCATCCGCAAGCGCGAGATACGCAGCGAGGA 473
                      ************************************************************

consensus_7191#0      CGTAGTCCGTGCGTACATCCAACGGTGCCAGCAGGTCAACCCACTGCTAAACGCCATCGT 491
consensus_7191#1      CGTAGTCCGTGCGTACATCCAACGGTGCCAGCAGGTCAACCCACTGCTAAACGCCATCGT 533
                      ************************************************************

consensus_7191#0      CGAGGATCGTTTCGAAGCCGCACTGGAAGAGGCCCAGGAAGTCGACCGTCAGCTGGCGAA 551
consensus_7191#1      CGAGGATCGTTTCGAAGCCGCACTGGAAGAGGCCCAGGAAGTCGACCGTCAGCTGGCGAA 593
                      ************************************************************

consensus_7191#0      GGGTACGCTCGGACCC-GCGGAAGAGTTAGCTCGCACCAAACCCCTGCTCGGACTGCCGG 610
consensus_7191#1      GGGTACGCTCGGACCCCGCGGAAGAGTTAGCTCGCACCAAACCCCTGCTCGGACTGCCGG 653
                      **************** *******************************************

consensus_7191#0      TTTCGATCAAGGAAAGCTTAGCCGTCGAGGGCATGAGCAACACGGCCGGTCGAAAGCTGC 670
consensus_7191#1      TTTCGATCAAGGAAAGCTTA---------------------------------------- 673
                      ********************                                        

consensus_7191#0      GCGAAAAGAAGGTCGCACTCAGTGATGCGCCCGTCGTGCACCAGATTAAGCGGGCCGGTG 730
consensus_7191#1      ------------------------------------------------------------
                                                                                  

consensus_7191#0      GCATTGTGCTGCTCGTAAGCAACACGCCCGAACTGTGCCTGTGCTGGGAAACGTACAACC 790
consensus_7191#1      ------------------------------------------------------------
                                                                                  

consensus_7191#0      AGTGCACGGGTCTAACGCGCAACCCGTACAACCTGCAGCGTACTGCGGGCGGATCGTCCG 850
consensus_7191#1      ------------------------------------------------------------
                                                                                  

consensus_7191#0      GCGGTGAGGCCGCACTGATTGCGGCGGCCGGATCGCTGCTCGGCGTTACGACCGATATAG 910
consensus_7191#1      ------------------------------------------------------------
                                                                                  

consensus_7191#0      CCGGCTCTTCGCGCCTACCAGCCATGTTTACTGGTGTGTTTGGCCATAAACCTTCACCGG 970
consensus_7191#1      ------------------------------------------------------------
                                                                                  

consensus_7191#0      TACGTGGTGTCACCGTACGGGCACCATCCGTCCTGTGACGATGAGAACTGGGGCAGCTTC 1030
consensus_7191#1      ------------------------------------------------------------
                                                                                  

consensus_7191#0      TTCACGCCCGGCGCCATG 1048
consensus_7191#1      ------------------
                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)