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Anopheles gambiae
cluster # 7267 cluster # 7267       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7267#0 length = 1286 sequences # 3  
consensus_7267#1 length = 914 sequences # 2  
consensus_7267#2 length = 749 sequences # 1  
consensus_7267#3 length = 742 sequences # 1  

consensusID : consensus_7267#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1286
fasta sequence
                              [CCGCCCACGCGTCCGACGCCAAAAGCTGCTGGACGAGCGCACCGAGGAGCAGAAGATTATGCGCGAAGCGCTCGAAGAGTCGGTGCGCGAACGGGCCCAGGTAGAGGCGAAGTGGAAGCAAAGCTTCGAGCAGCTGCGTGACGTGAACAATGCGCGCGAGGAAGATCTGATGAAGGATTGCGAGTTTACGATCCGCAGCATGCAAAAGACGTGCAAGGAGAAGATGGAAACGGTCGAGAAGGAGCGGAAGCAGGCGCTCGAGCAGGTGAGCCGGCTGGAGGAGTTGGCCCGCAAGCGCACGGACGAGGTGCGCCACCTGAAGTCGTACGAGGCGGAGGTGGAGCAGCTGCGCGGGCTTACGTACGATCAGAAGGAATCGCTGCTCGGGATGACCCGGCAGGTGGAGAGCTTGAAGGCGGAGCTGGAGACGGCGTACAACAAGCTCGAGGAGGAGATGGTGAAGGTGCAGCAGATAAAGAACCGCTGTGAATATCAACTGTGTGAAAAGGAACGGGAAGCCCTGAACCGGATAGAGATCGCCCGAGGGGAGATTGCGATGCAGTGGGAGGATCGGCTGCTGCACGAGATGAACCGGCTGAAGGTGGAGCTGGAACAGACGCACATGGAGGAGCGTACCTCCGCCATCGAGAAGCTGCGCCGCGAGGCACTGGCCGAAACGGAAGCCATGAGCCGGCGGTTCAATGAGCGTGAAATGCAGCTGAAAAATGAGATCGAATCACTCAAAGCGAAGCTGGAACAGCAAAAGAAGCAGATGGCCAATGCACAGACCGACGCTGACCAGAAGCTGCTCCAGTCGCGCATGTACGTGGAGCGTGCCGAGCGGGAGCACGAGCGCAAGCTGGCCAAAGAAATGTCCGAGAAGGATGAAATCATCGAAACCCTCAAGCAACAGTTTGAAAAGGAAAAGTTGGAGTTGGAGCAGCACTTTAGCGAACGGATTCAGCAGGTGCAGGAAGAGTTTGCGCGGGAAATATCCGACACAACCGAGCTGATGAAAACTGCCCACAAAAAGGAGCTAGAAACACAATGGAAGGCTCTCGTTGCAGAGAAGGAAGAAGCATTGCATCTGATGGACAGTCGCAACCGACACCGGCTTGAAGATGCTGAGAACAAAATCAGTTTCGAAGAGATGCGCTTACGCTACGAACGGCGCGAACCACGCATGGAAGATTTGCAGCAGATCGAAGAGCTGAAGACGGTGATCGAATCCGCAGGAGCGTGATTTGCGGCAGCTTACCGAACGATTGCGAGAGTTGCAGCTGCAG]

[+] EMBL BM595012             [CCGCCCACGCGTCCGACGCCAAAAGCTGCTGGACGAGCGCACCGAGGAGCAGAAGATTATGCGCGAAGCGCTCGAAGAGTCGGTGCGCGAACGGGCCCAGGTAGAGGCGAAGTGGAAGCAAAGCTTCGAGCAGCTGCGTGACGTGAACAATGCGCGCGAGGAAGATCTGATGAAGGATTGCGAGTTTACGATCCGCAGCATGCAAAAGACGTGCAAGGAGAAGATGGAAACGGTCGAGAAGGAGCGGAAGCAGGCGCTCGAGCAGGTGAGCCGGCTGGAGGAGTTGGCCCGCAAGCGCACGGACGAGGTGCGCCACCTGAAGTCGTACGAGGCGGAGGTGGAGCAGCTGCGCGGGCTTACGTACGATCAGAAGGAATCGCTGCTCGGGATGACCCGGCAGGTGGAGAGCTTGAAGGCGGAGCTGGAGACGGCGTACAACAAGCTCGAGGAGGAGATGGTGAAGGTGCAGCAGATAAAGAACCGCTGTGAATATCAACTGTGTGAAAAGGAACGGGAAGCCCTGAACCGGATAGAGATCGCCCGAGGGGAGATTGCGATGCAGTGGGAGGATCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM632747             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgATATCAACTGTGTGAAAAGGAACGGGAAGCCCTGAACCGGATAGAGATCGCCCGAGGGGAGATTGCGATGCAGTGGGAGGATCGGCTGCTGCACGAGATGAACCGGCTGAAGGTGGAGCTGGAACAGACGCACATGGAGGAGCGTACCTCCGCCATCGAGAAGCTGCGCCGCGAGGCACTGGCCGAAACGGAAGCCATGAGCCGGCGGTTCAATGAGCGTGAAATGCAGCTGAAAAATGAGATCGAATCACTCAAAGCGAAGCTGGAACAGCAAAAGAAGCAGATGGCCAATGCACAGACCGACGCTGACCAGAAGCTGCTCCAGTCGCGCATGTACGTGGAGCGTGCCGAGCGGGAGCACGAGCGCAAGCTGGCCAAAGAAATGTCCGAGAAGGATGAAATCATCGAAACCCTCAAGCAACAGTTTGAAAAGGAAAAGTTGGAGTTGGAGCAGCACTTTAGCGAACGGATTCAGCAGGTGCAGGAAGAGTTTGCGCGGGAAATATCCGACACAACCGAGCTGATGAAAACTGCCCACAAAAAGGAGCTAGAAACACAATGGAAGGCTCTCGTTGCAGAGAAGGAAGAAGCATTGCA                                                                                                                                                                                                        ]
[+] EMBL BM645150             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccGGAGGAGCGTACCTCCGCCATCGAGAAGCTGCGCCGCGAGGCACTGGCCGAAACGGAAGCCATGAGCCGGCGGTTCAATGAGCGTGAAATGCAGCTGAAAAATGAGATCGAATCACTCAAAGCGAAGCTGGAACAGCAAAAGAAGCTGATGGCCAATGCACAGACCGACGCTGACCAGAAGCTGCTCCAGTCGCGCATGTACGTGGAGCGTGCCGAGCGGGAGCACGAGCGCAAGCTGGCCAAAGAAATGTCCGAGAAGGATGAAATCATCGAAACCCTCAAGCAACAGTTTGAAAAGGAAAAGTTGGAGTTGGAGCAGCACTTTAGCGAACGGATTCAGCAGGTGCAGGAAGAGTTTGCGCGGGAAATATCCGACACGACCGAGCTGATGAAAACTGCCCACAAAAAGGAGCTAGAAACACAATGGAAGGCTCTCGTTGCAGAGAAGGAAGAAGCACTGCATCTGATGGACAGTCGCAACCGACACCGGCTTGAAGATGCTGAGAACAAAATCAGTTTCGAAGAGATGCGCTTACGCTACGAACGGCGCGAACCACGCATGGAAGATTTGCAGCAGATCGAAGAGCTGAAGACGGTGATCGAATCCGCAGGAGCGTGATTTGCGGCAGCTTACCGAACGATTGCGAGAGTTGCAGCTGCAG]


>consensus_7267#0 CCGCCCACGCGTCCGACGCCAAAAGCTGCTGGACGAGCGCACCGAGGAGCAGAAGATTAT GCGCGAAGCGCTCGAAGAGTCGGTGCGCGAACGGGCCCAGGTAGAGGCGAAGTGGAAGCA AAGCTTCGAGCAGCTGCGTGACGTGAACAATGCGCGCGAGGAAGATCTGATGAAGGATTG CGAGTTTACGATCCGCAGCATGCAAAAGACGTGCAAGGAGAAGATGGAAACGGTCGAGAA GGAGCGGAAGCAGGCGCTCGAGCAGGTGAGCCGGCTGGAGGAGTTGGCCCGCAAGCGCAC GGACGAGGTGCGCCACCTGAAGTCGTACGAGGCGGAGGTGGAGCAGCTGCGCGGGCTTAC GTACGATCAGAAGGAATCGCTGCTCGGGATGACCCGGCAGGTGGAGAGCTTGAAGGCGGA GCTGGAGACGGCGTACAACAAGCTCGAGGAGGAGATGGTGAAGGTGCAGCAGATAAAGAA CCGCTGTGAATATCAACTGTGTGAAAAGGAACGGGAAGCCCTGAACCGGATAGAGATCGC CCGAGGGGAGATTGCGATGCAGTGGGAGGATCGGCTGCTGCACGAGATGAACCGGCTGAA GGTGGAGCTGGAACAGACGCACATGGAGGAGCGTACCTCCGCCATCGAGAAGCTGCGCCG CGAGGCACTGGCCGAAACGGAAGCCATGAGCCGGCGGTTCAATGAGCGTGAAATGCAGCT GAAAAATGAGATCGAATCACTCAAAGCGAAGCTGGAACAGCAAAAGAAGCAGATGGCCAA TGCACAGACCGACGCTGACCAGAAGCTGCTCCAGTCGCGCATGTACGTGGAGCGTGCCGA GCGGGAGCACGAGCGCAAGCTGGCCAAAGAAATGTCCGAGAAGGATGAAATCATCGAAAC CCTCAAGCAACAGTTTGAAAAGGAAAAGTTGGAGTTGGAGCAGCACTTTAGCGAACGGAT TCAGCAGGTGCAGGAAGAGTTTGCGCGGGAAATATCCGACACAACCGAGCTGATGAAAAC TGCCCACAAAAAGGAGCTAGAAACACAATGGAAGGCTCTCGTTGCAGAGAAGGAAGAAGC ATTGCATCTGATGGACAGTCGCAACCGACACCGGCTTGAAGATGCTGAGAACAAAATCAG TTTCGAAGAGATGCGCTTACGCTACGAACGGCGCGAACCACGCATGGAAGATTTGCAGCA GATCGAAGAGCTGAAGACGGTGATCGAATCCGCAGGAGCGTGATTTGCGGCAGCTTACCG AACGATTGCGAGAGTTGCAGCTGCAG



consensusID : consensus_7267#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 914
fasta sequence
                              [CGACCCACGCGTCCGCCTGAACCGGATAGAGATCGCCCGAGGGGAGATTGCGATGCAGTGGGAGGATCGGCTGCTGCACGAGATGAACCGGCTGAAGGTGGAGCTGGAACAGACGCACATGGAGGAGCGTACCTCCGCCATCGAGAAGCTGCGCCGCGAGGCACTGGCCGAAACGGAAGCCATGAGCCGGCGGTTCAATGAGCGTGAAATGCAGCTGAAAAATGAGATCGAATCACTCAAAGCGAAGCTGGAACAGCAAAAGAAGCTGATGGCCAATGCACAGACCGACGCTGACCAGAAGCTGCTCCAGTCGCGCATGTACGTGGAGCGTGCCGAGCGGGAGCACGAGCGCAAGCTGGCCAAAGAAATGTCCGAGAAGGATGAAATCATCGAAACCCTCAAGCAACAGTTTGAAAAGGAAAAGTTGGAGTTGGAGCAGCACTTTAGCGAACGGATTCAGCAGGTGCAGGAAGAGTTTGCGCGGGAAATATCCGACACGACCGAGCTGATGAAAACTGCCCACAAAAAGGAGCTAGAAACACAATGGAAGGCTCTCGTTGCAGAGAAGGAAGAAGCACTGCATCTGATGGACAGTCGCAACCGACACCGGCTTGAAGATGCTGAGAACAAAATCAGAGAACTCACGACCAGCCATCAGCGGCAGCTGAAGGACCTGCAGGAAGAGCACAGCTTCGTGGTGCACAGTCTGGAGTCGCGGGACACGAAGAACGCGCAAGAAATTCAAACGCTCCATAAAAAGTGCCGCTGCCTAACGAATCTTTTCGAAGAGATGCGCTTACGCTACGAACGGCGCGAACCTCGCATGGAAGATTTGCAGCAGATCGAAGAGCTGAAGACGGTGATCGAATCGCAGGAGCGTGATTTGCGGCAGCTTACCGAACGATTGCGAGAGT]

[+] EMBL BM620978             [CGACCCACGCGTCCGCCTGAACCGGATAGAGATCGCCCGAGGGGAGATTGCGATGCAGTGGGAGGATCGGCTGCTGCACGAGATGAACCGGCTGAAGGTGGAGCTGGAACAGACGCACATGGAGGAGCGTACCTCCGCCATCGAGAAGCTGCGCCGCGAGGCACTGGCCGAAACGGAAGCCATGAGCCGGCGGTTCAATGAGCGTGAAATGCAGCTGAAAAATGAGATCGAATCACTCAAAGCGAAGCTGGAACAGCAAAAGAAGCTGATGGCCAATGCACAGACCGACGCTGACCAGAAGCTGCTCCAGTCGCGCATGTACGTGGAGCGTGCCGAGCGGGAGCACGAGCGCAAGCTGGCCAAAGAAATGTCCGAGAAGGATGAAATCATCGAAACCCTCAAGCAACAGTTTGAAAAGGAAAAGTTGGAGTTGGAGCAGCACTTTAGCGAACGGATTCAGCAGGTGCAGGAAGAGTTTGCGCGGGAAATATCCGACACGACCGAGCTGATGAAAACTGCCCACAAAAAGGAGCTAGAAACACAATGGAAGGCTCTCGTTGCAGAGAAGGAAGAAGCACTGCATCTGATGGACAGTCGCAACCGACACCGGCTTGAAGATGCTGAGAACAAAATCAGAGAACTCACGACCAGCCATCAGC                                                                                                                                                                                                                                                               ]
[+] EMBL BX620366             [                                                                                                                                                                                                                                                                                    TGCACAGACCGACGCTGACCAGAAGCTGCTCCAGTCGCGCATGTACGTGGAGCGTGCCGAGCGGGAGCACGAGCGCAAGCTGGCCAAAGAAATGTCCGAGAAGGATGAAATCATCGAAACCCTCAAGCAACAGTTTGAAAAGGAAAAGTTGGAGTTGGAGCAGCACTTTAGCGAACGGATTCAGCAGGTGCAGGAAGAGTTTGCGCGGGAAATATCCGACACGACCGAGCTGATGAAAACTGCCCACAAAAAGGAGCTAGAAACACAATGGAAGGCTCTCGTTGCAGAGAAGGAAGAAGCACTGCATCTGATGGACAGTCGCAACCGACACCGGCTTGAAGATGCTGAGAACAAAATCAGAGAACTCACGACCAGCCATCAGCGGCAGCTGAAGGACCTGCAGGAAGAGCACAGCTTCGTGGTGCACAGTCTGGAGTCGCGGGACACGAAGAACGCGCAAGAAATTCAAACGCTCCATAAAAAGTGCCGCTGCCTAACGAATCTTTTCGAAGAGATGCGCTTACGCTACGAACGGCGCGAACCTCGCATGGAAGATTTGCAGCAGATCGAAGAGCTGAAGACGGTGATCGAATCGCAGGAGCGTGATTTGCGGCAGCTTACCGAACGATTGCGAGAGT]


>consensus_7267#1 CGACCCACGCGTCCGCCTGAACCGGATAGAGATCGCCCGAGGGGAGATTGCGATGCAGTG GGAGGATCGGCTGCTGCACGAGATGAACCGGCTGAAGGTGGAGCTGGAACAGACGCACAT GGAGGAGCGTACCTCCGCCATCGAGAAGCTGCGCCGCGAGGCACTGGCCGAAACGGAAGC CATGAGCCGGCGGTTCAATGAGCGTGAAATGCAGCTGAAAAATGAGATCGAATCACTCAA AGCGAAGCTGGAACAGCAAAAGAAGCTGATGGCCAATGCACAGACCGACGCTGACCAGAA GCTGCTCCAGTCGCGCATGTACGTGGAGCGTGCCGAGCGGGAGCACGAGCGCAAGCTGGC CAAAGAAATGTCCGAGAAGGATGAAATCATCGAAACCCTCAAGCAACAGTTTGAAAAGGA AAAGTTGGAGTTGGAGCAGCACTTTAGCGAACGGATTCAGCAGGTGCAGGAAGAGTTTGC GCGGGAAATATCCGACACGACCGAGCTGATGAAAACTGCCCACAAAAAGGAGCTAGAAAC ACAATGGAAGGCTCTCGTTGCAGAGAAGGAAGAAGCACTGCATCTGATGGACAGTCGCAA CCGACACCGGCTTGAAGATGCTGAGAACAAAATCAGAGAACTCACGACCAGCCATCAGCG GCAGCTGAAGGACCTGCAGGAAGAGCACAGCTTCGTGGTGCACAGTCTGGAGTCGCGGGA CACGAAGAACGCGCAAGAAATTCAAACGCTCCATAAAAAGTGCCGCTGCCTAACGAATCT TTTCGAAGAGATGCGCTTACGCTACGAACGGCGCGAACCTCGCATGGAAGATTTGCAGCA GATCGAAGAGCTGAAGACGGTGATCGAATCGCAGGAGCGTGATTTGCGGCAGCTTACCGA ACGATTGCGAGAGT



consensusID : consensus_7267#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 749
fasta sequence
                              [CAGGTTAAAATGGAAAAGTTGGAGTTGGAGCAGCACTTTACTGAACGGATTCAGCAGTGTGCAGTGAAGAGTTTGCGCGGGAAATATCTGACACAACCTGAGCTGATGAAAACTGGCCACAAAAATGGAGCTAGAAACACAATGGAATGTGCTCTCGTTGCAGAGAAGTGAAGAAGCATTTGCATTCTTGATTGACATGGTCGCTAACCGACTACCGGCCTTTGAAGGATTGCTTGAGAACAAACACTCCGNAGGAAACCTCACCGAACCAAGCCATCAAGCGGCAAGCCTTTGACAACAGTGGACCCCCTTGGCCATGGGGAAAACGGAANGGCCAACCCAAGGCNATTTTTCCTGCTTGGGGTTTGCCNAACCNAAGGCNTCCCTTTGGGGNACAGNGTTTCCGCCCGTGCGGCTACCNACCCGGATACACGGAAAACACNGCCCGCGCCCACAAAGCAACAAACTTTCCCAACAACCGGGCCCTTCCCCACTTTACANCACACAGGGTTTGGGCCCCNCGCNCTTTGGCCNCCTTTAAAACCCGGCACCACTTACCTTCCAACCCCCGACAGCNGGCACATGCGAATATAGCCCGGCCCATTCAAACGGGCCTTNAAACGGNAAACANCCGGGGCTGGCCCTGTAATGGGCCCCCAAACGTGCCCAATTATGTGGACNCACGGCGCAATTATTTCTCGCCCGAAGNCACAGGGAAATTATAGCCACCANAGACAACGCCCNTCTCG]

[+] EMBL AL695820             [CAGGTTAAAATGGAAAAGTTGGAGTTGGAGCAGCACTTTACTGAACGGATTCAGCAGTGTGCAGTGAAGAGTTTGCGCGGGAAATATCTGACACAACCTGAGCTGATGAAAACTGGCCACAAAAATGGAGCTAGAAACACAATGGAATGTGCTCTCGTTGCAGAGAAGTGAAGAAGCATTTGCATTCTTGATTGACATGGTCGCTAACCGACTACCGGCCTTTGAAGGATTGCTTGAGAACAAACACTCCGNAGGAAACCTCACCGAACCAAGCCATCAAGCGGCAAGCCTTTGACAACAGTGGACCCCCTTGGCCATGGGGAAAACGGAANGGCCAACCCAAGGCNATTTTTCCTGCTTGGGGTTTGCCNAACCNAAGGCNTCCCTTTGGGGNACAGNGTTTCCGCCCGTGCGGCTACCNACCCGGATACACGGAAAACACNGCCCGCGCCCACAAAGCAACAAACTTTCCCAACAACCGGGCCCTTCCCCACTTTACANCACACAGGGTTTGGGCCCCNCGCNCTTTGGCCNCCTTTAAAACCCGGCACCACTTACCTTCCAACCCCCGACAGCNGGCACATGCGAATATAGCCCGGCCCATTCAAACGGGCCTTNAAACGGNAAACANCCGGGGCTGGCCCTGTAATGGGCCCCCAAACGTGCCCAATTATGTGGACNCACGGCGCAATTATTTCTCGCCCGAAGNCACAGGGAAATTATAGCCACCANAGACAACGCCCNTCTCG]


>consensus_7267#2 CAGGTTAAAATGGAAAAGTTGGAGTTGGAGCAGCACTTTACTGAACGGATTCAGCAGTGT GCAGTGAAGAGTTTGCGCGGGAAATATCTGACACAACCTGAGCTGATGAAAACTGGCCAC AAAAATGGAGCTAGAAACACAATGGAATGTGCTCTCGTTGCAGAGAAGTGAAGAAGCATT TGCATTCTTGATTGACATGGTCGCTAACCGACTACCGGCCTTTGAAGGATTGCTTGAGAA CAAACACTCCGNAGGAAACCTCACCGAACCAAGCCATCAAGCGGCAAGCCTTTGACAACA GTGGACCCCCTTGGCCATGGGGAAAACGGAANGGCCAACCCAAGGCNATTTTTCCTGCTT GGGGTTTGCCNAACCNAAGGCNTCCCTTTGGGGNACAGNGTTTCCGCCCGTGCGGCTACC NACCCGGATACACGGAAAACACNGCCCGCGCCCACAAAGCAACAAACTTTCCCAACAACC GGGCCCTTCCCCACTTTACANCACACAGGGTTTGGGCCCCNCGCNCTTTGGCCNCCTTTA AAACCCGGCACCACTTACCTTCCAACCCCCGACAGCNGGCACATGCGAATATAGCCCGGC CCATTCAAACGGGCCTTNAAACGGNAAACANCCGGGGCTGGCCCTGTAATGGGCCCCCAA ACGTGCCCAATTATGTGGACNCACGGCGCAATTATTTCTCGCCCGAAGNCACAGGGAAAT TATAGCCACCANAGACAACGCCCNTCTCG



consensusID : consensus_7267#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 742
fasta sequence
                              [ACAGTTTGAAAAGGAAAAGTTGGAGTTGGAGCAGCACTTTAGCGAACGGATTCAGCAGGTGCAGGAAGAGTTTGCGCGGGAAATATCCGACACGACCGAGCTGATGAAAACTGCCCACAAAAAGGAGCTAGAAACACAATGGAAGGCTCTTGTTGCAGAGAAGGAAGAAGCACTGCATCTGATGGACAGTCGCAGCCGACACCGGCTTGAAGATGCTGAGAACAAAATCAGTACCGCCGGTGGGCTGGAAGAGCCAATGCGCCAAGCCGCCGCTGCACGCAACCCACTGATACAGCTAATACTGCTGCTTGTGCAACTGGTGAAAGGAGCGTATCCCTTGTTGCCCTCGATGCTACTCTACCAGCAGACACATTCCTTACCGTTGGCATCGGCCGTGCTACTGCTAACCTTTGGGCTGATCGTCTACTGTCAGCTACGTATGGTGGTTCACCATTGAGACGTTGCAGCACTGACCAAATGATTATCAAAAAACACATAATTCTTCTTGTTTTACCCTTCCATGGATAAACATCAAAAAACGCATCGTGAAAGCTCTATTGGCATTTATCTTTTAGCACCAACCCAACCAAATTACCCAATACCCCGGTTTGCCTTTCTCTCTACACTGCCTTTTTGTGAGTGAAATAGCATTTACCTGTTGTTGTTTGTGAGAGTGGGGAAAAGCCATCTCCCATTTTGTTTGCACATTGTTCTTGTGCGCGTGTGTGCGTTGGGCTGTTAA]

[+] EMBL BX616841             [ACAGTTTGAAAAGGAAAAGTTGGAGTTGGAGCAGCACTTTAGCGAACGGATTCAGCAGGTGCAGGAAGAGTTTGCGCGGGAAATATCCGACACGACCGAGCTGATGAAAACTGCCCACAAAAAGGAGCTAGAAACACAATGGAAGGCTCTTGTTGCAGAGAAGGAAGAAGCACTGCATCTGATGGACAGTCGCAGCCGACACCGGCTTGAAGATGCTGAGAACAAAATCAGTACCGCCGGTGGGCTGGAAGAGCCAATGCGCCAAGCCGCCGCTGCACGCAACCCACTGATACAGCTAATACTGCTGCTTGTGCAACTGGTGAAAGGAGCGTATCCCTTGTTGCCCTCGATGCTACTCTACCAGCAGACACATTCCTTACCGTTGGCATCGGCCGTGCTACTGCTAACCTTTGGGCTGATCGTCTACTGTCAGCTACGTATGGTGGTTCACCATTGAGACGTTGCAGCACTGACCAAATGATTATCAAAAAACACATAATTCTTCTTGTTTTACCCTTCCATGGATAAACATCAAAAAACGCATCGTGAAAGCTCTATTGGCATTTATCTTTTAGCACCAACCCAACCAAATTACCCAATACCCCGGTTTGCCTTTCTCTCTACACTGCCTTTTTGTGAGTGAAATAGCATTTACCTGTTGTTGTTTGTGAGAGTGGGGAAAAGCCATCTCCCATTTTGTTTGCACATTGTTCTTGTGCGCGTGTGTGCGTTGGGCTGTTAA]


>consensus_7267#3 ACAGTTTGAAAAGGAAAAGTTGGAGTTGGAGCAGCACTTTAGCGAACGGATTCAGCAGGT GCAGGAAGAGTTTGCGCGGGAAATATCCGACACGACCGAGCTGATGAAAACTGCCCACAA AAAGGAGCTAGAAACACAATGGAAGGCTCTTGTTGCAGAGAAGGAAGAAGCACTGCATCT GATGGACAGTCGCAGCCGACACCGGCTTGAAGATGCTGAGAACAAAATCAGTACCGCCGG TGGGCTGGAAGAGCCAATGCGCCAAGCCGCCGCTGCACGCAACCCACTGATACAGCTAAT ACTGCTGCTTGTGCAACTGGTGAAAGGAGCGTATCCCTTGTTGCCCTCGATGCTACTCTA CCAGCAGACACATTCCTTACCGTTGGCATCGGCCGTGCTACTGCTAACCTTTGGGCTGAT CGTCTACTGTCAGCTACGTATGGTGGTTCACCATTGAGACGTTGCAGCACTGACCAAATG ATTATCAAAAAACACATAATTCTTCTTGTTTTACCCTTCCATGGATAAACATCAAAAAAC GCATCGTGAAAGCTCTATTGGCATTTATCTTTTAGCACCAACCCAACCAAATTACCCAAT ACCCCGGTTTGCCTTTCTCTCTACACTGCCTTTTTGTGAGTGAAATAGCATTTACCTGTT GTTGTTTGTGAGAGTGGGGAAAAGCCATCTCCCATTTTGTTTGCACATTGTTCTTGTGCG CGTGTGTGCGTTGGGCTGTTAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7267#2      ------------------------------------------------------------
consensus_7267#3      ------------------------------------------------------------
consensus_7267#0      CCGCCCACGCGTCCGACGCCAAAAGCTGCTGGACGAGCGCACCGAGGAGCAGAAGATTAT 60
consensus_7267#1      ------------------------------------------------------------
                                                                                  

consensus_7267#2      ------------------------------------------------------------
consensus_7267#3      ------------------------------------------------------------
consensus_7267#0      GCGCGAAGCGCTCGAAGAGTCGGTGCGCGAACGGGCCCAGGTAGAGGCGAAGTGGAAGCA 120
consensus_7267#1      ------------------------------------------------------------
                                                                                  

consensus_7267#2      ------------------------------------------------------------
consensus_7267#3      ------------------------------------------------------------
consensus_7267#0      AAGCTTCGAGCAGCTGCGTGACGTGAACAATGCGCGCGAGGAAGATCTGATGAAGGATTG 180
consensus_7267#1      ------------------------------------------------------------
                                                                                  

consensus_7267#2      ------------------------------------------------------------
consensus_7267#3      ------------------------------------------------------------
consensus_7267#0      CGAGTTTACGATCCGCAGCATGCAAAAGACGTGCAAGGAGAAGATGGAAACGGTCGAGAA 240
consensus_7267#1      ------------------------------------------------------------
                                                                                  

consensus_7267#2      ------------------------------------------------------------
consensus_7267#3      ------------------------------------------------------------
consensus_7267#0      GGAGCGGAAGCAGGCGCTCGAGCAGGTGAGCCGGCTGGAGGAGTTGGCCCGCAAGCGCAC 300
consensus_7267#1      ------------------------------------------------------------
                                                                                  

consensus_7267#2      ------------------------------------------------------------
consensus_7267#3      ------------------------------------------------------------
consensus_7267#0      GGACGAGGTGCGCCACCTGAAGTCGTACGAGGCGGAGGTGGAGCAGCTGCGCGGGCTTAC 360
consensus_7267#1      ------------------------------------------------------------
                                                                                  

consensus_7267#2      ------------------------------------------------------------
consensus_7267#3      ------------------------------------------------------------
consensus_7267#0      GTACGATCAGAAGGAATCGCTGCTCGGGATGACCCGGCAGGTGGAGAGCTTGAAGGCGGA 420
consensus_7267#1      ------------------------------------------------------------
                                                                                  

consensus_7267#2      ------------------------------------------------------------
consensus_7267#3      ------------------------------------------------------------
consensus_7267#0      GCTGGAGACGGCGTACAACAAGCTCGAGGAGGAGATGGTGAAGGTGCAGCAGATAAAGAA 480
consensus_7267#1      ------------------------------------------------------------
                                                                                  

consensus_7267#2      -----------------------------------------CAGGTTAAAATGGAAAAGT 19
consensus_7267#3      ----------------------------------------ACAGTTTGAAAAGGAAAAGT 20
consensus_7267#0      CCGCTGTGAATATCAACTGTGTGAAAAGGAACGGGAAGCCCTGAACCGGATAGAGATCGC 540
consensus_7267#1      ------------------------CGACCCACGCGTCCGCCTGAACCGGATAGAGATCGC 36
                                                                       *  *  *  * 

consensus_7267#2      TGGAGTTGGAGCAGCACTTTACTGAACGGATTCAGCAGTGTGCAGTGAAGAGTTTGCGCG 79
consensus_7267#3      TGGAGTTGGAGCAGCACTTTAGCGAACGGATTCAGCAG-GTGCAG-GAAGAGTTTGCGCG 78
consensus_7267#0      CCGAGGGGAGATTGCGATGCAGTGGGAGGATCGGCTGCTGCACGA-GATGAACCGGCTGA 599
consensus_7267#1      CCGAGGGGAGATTGCGATGCAGTGGGAGGATCGGCTGCTGCACGA-GATGAACCGGCTGA 95
                        ***  *     **  *  *  *   ****        *  *   ** **    **   

consensus_7267#2      GGAAATATCTGACACAACCTGAGCTGATGAAAACTGGCCACAAAAATGGAGCTAGAAACA 139
consensus_7267#3      GGAAATATCCGACACGACC-GAGCTGATGAAAACTGCCCACAAAAA-GGAGCTAGAAACA 136
consensus_7267#0      AGGTGGAGCTGGAACAGACGCACATGGAGGAGCGTACCTCCGCCATCGAGA--AGCTGCG 657
consensus_7267#1      AGGTGGAGCTGGAACAGACGCACATGGAGGAGCGTACCTCCGCCATCGAGA--AGCTGCG 153
                       *    * * *  **   *  *  **  * *   *  *  *   *  *     **   * 

consensus_7267#2      CAATGGAATGTGCTCTCGTTGCAGAGAAGTGAAGAAGCATTTGCATTCTTGATTGACATG 199
consensus_7267#3      CAATGGAAGG--CTCTTGTTGCAGAGAAG-GAAGAAGCACT-GCATC--TGATGGACA-- 188
consensus_7267#0      CCGCGAGGCACTGGCCGAAACGGAAGCCATGAGCCGGCGGTTCAATGAGCGTGAAATGCA 717
consensus_7267#1      CCGCGAGGCACTGGCCGAAACGGAAGCCATGAGCCGGCGGTTCAATGAGCGTGAAATGCA 213
                      *   *         *         **    **    **  *   **    *    *    

consensus_7267#2      GTCGCTAACCGACTACCGG--CCTTTGAAGGATTGCTTGAG-AACAAA--CACT-CCGNA 253
consensus_7267#3      GTCGC-AGCCGAC-ACCGG--C--TTGAAGA--TGCT-GAG-AACAAAATCAGTACCGCC 238
consensus_7267#0      GCTGAAAAATGAG-ATCGAATCACTCAAAGCGAAGCTGGAACAGCAAAAGAAG--CAGAT 774
consensus_7267#1      GCTGAAAAATGAG-ATCGAATCACTCAAAGCGAAGCTGGAACAGCAAAAGAAG--CTGAT 270
                      *  *  *   **  * **   *  *  ***    *** **  * ****   *   * *  

consensus_7267#2      GGAAACCTCACCGAACCAAGCCATCAAGCGGCAAGCCTTTGACAACAGTGGACCCCCTTG 313
consensus_7267#3      GGTGGGCTGGAAGAGCCAATGCGCCAAGCCGCCGCTGCACGCAACCCACTGATACAGCTA 298
consensus_7267#0      GGCCAATGCACAGACCGACGCTGACCAGAAGCTGCTCCA-GTCGCGCATGTACGTGGAGC 833
consensus_7267#1      GGCCAATGCACAGACCGACGCTGACCAGAAGCTGCTCCA-GTCGCGCATGTACGTGGAGC 329
                      **          ** * *      * **  **        *          *        

consensus_7267#2      GCCATG---GGGAAAACGGAAN-GGCCAACCCAAGGCNATTTTTCCTGC--TTGGGGTTT 367
consensus_7267#3      ATACTG---CTGCTTGTGCAACTGGTGAAAGGAGCGTATCCCTTGTTGCCCTCGATGCTA 355
consensus_7267#0      GTGCCGAGCGGGAGCACGAGCGCAAGCTGGCCAAAGAAATGTCCGAGAAGGATGAAATCA 893
consensus_7267#1      GTGCCGAGCGGGAGCACGAGCGCAAGCTGGCCAAAGAAATGTCCGAGAAGGATGAAATCA 389
                           *     *     *              *  *                 *      

consensus_7267#2      GCCNAACCN--AAGGCNTCCCTTTGGGGNACAGNGTTTCCGCCCGTGCGGC-TACCNACC 424
consensus_7267#3      CTCTACCAG--CAGACACATTCCTTACCGTTGGCAT---CGGCCGTGCTAC-TGCTAACC 409
consensus_7267#0      TCGAAACCCTCAAGCAACAGTTTGAAAAGGAAAAGTTGGAGTTGGAGCAGCACTTTAGCG 953
consensus_7267#1      TCGAAACCCTCAAGCAACAGTTTGAAAAGGAAAAGTTGGAGTTGGAGCAGCACTTTAGCG 449
                          * *     **                     *    *   * **  *       * 

consensus_7267#2      CGGATACACGGAAAACACNGCCCGCGCCCACAAAGCAACAAACTTTCCCAACAACCGGGC 484
consensus_7267#3      TTTGGGCTGATCGTCTACTGTCAGC-TACGTATGGTGGTTCACCATTGAGACGTTGCAGC 468
consensus_7267#0      AACGGATTCAGCAGGTGCAGGAAGAGTTTGC---GCGGGAAATATCCGACACAACCGAGC 1010
consensus_7267#1      AACGGATTCAGCAGGTGCAGGAAGAGTTTGC---GCGGGAAATATCCGACACGACCGAGC 506
                                       * *   *          *      *        **      **

consensus_7267#2      CCTTCCCCACTTTACANCACACAGGGTTTGGGCCCCNCGCNCTTTGGCCNCCTTTA---A 541
consensus_7267#3      ACTGACCAAATGATTATCAAAAAACACATAA-TTCTTCTTGTTTTACCCTTCCATGGATA 527
consensus_7267#0      TGATGAAAACTGCCCACAAAAAGGAGCTAGAAACACAATGGAAGGCTCTCGTTGCAGAGA 1070
consensus_7267#1      TGATGAAAACTGCCCACAAAAAGGAGCTAGAAACACAATGGAAGGCTCTCGTTGCAGAGA 566
                              * *    *  * *                          *           *

consensus_7267#2      AACCCGGCACCACTTACCTTCCAACCCCCGACAGCNGGCACATGCGAATAT-AGCCCGG- 599
consensus_7267#3      AACATCAAAAAACGCATCGTGAAAGCTCTATTGGCATTTATCTTTTAGCACCAACCCAA- 586
consensus_7267#0      AGGAAGAAGCATTGCATCTGATGGACAGTCGCAACCGACACCGGCTTGAAGATGCTGAGA 1130
consensus_7267#1      AGGAAGAAGCACTGCATCTGATGGACAGTCGCAACCGACACCGGCTTGAAGATGCTGAGA 626
                      *              * *       *        *    *         *    *     

consensus_7267#2      -CCCATTCAAACGG---------------------------------------------- 612
consensus_7267#3      -CCAAATTACCCAAT--------------------------------------------- 600
consensus_7267#0      ACAAAATCAG-------------------------------------------------- 1140
consensus_7267#1      ACAAAATCAGAGAACTCACGACCAGCCATCAGCGGCAGCTGAAGGACCTGCAGGAAGAGC 686
                       *  * * *                                                   

consensus_7267#2      ------------------GCCTTNAAACGG------------------------------ 624
consensus_7267#3      ------------------ACCCCGGTTTGC------------------------------ 612
consensus_7267#0      ------------------------------------------------------------
consensus_7267#1      ACAGCTTCGTGGTGCACAGTCTGGAGTCGCGGGACACGAAGAACGCGCAAGAAATTCAAA 746
                                                                                  

consensus_7267#2      -------------------------------NAAACANCCGGGGCTGGCCCTGT---AAT 650
consensus_7267#3      -------------------------------CTTTCTCTCTACACTGCCTTTTTGTGAGT 641
consensus_7267#0      ----------------------------------TTTCGAAGAGATGCGCTTACGCTACG 1166
consensus_7267#1      CGCTCCATAAAAAGTGCCGCTGCCTAACGAATCTTTTCGAAGAGATGCGCTTACGCTACG 806
                                                                   **    *     *  

consensus_7267#2      GG-GCCCCCAA--ACGTGCCCAATTATGTGGACNCACGGCGCAATTATTTCTCGCC-C-G 705
consensus_7267#3      GA-AATAGCATTTACCTGTTGTTGTTTGTGAGAGTGGGGAAAAGCCATCTCCCATT-TTG 699
consensus_7267#0      AACGGCGCGAACCACGCATGGAAGATTTGCAGCAGATCGAAGAGCTGAAGACGGTGATCG 1226
consensus_7267#1      AACGGCGCGAACCTCGCATGGAAGATTTGCAGCAGATCGAAGAGCTGAAGACGGTGATCG 866
                               *    *           *           *   *                *

consensus_7267#2      AAGNCACAGGGAAATTATAGCCACCANAGACAACGCCCNTCTCG---------------- 749
consensus_7267#3      TTTGCACATTGTTCTTGTGCGCGT-GTGTGCGTTGGGCTGTTAA---------------- 742
consensus_7267#0      AATCCGCAGGAGCGTGATTTGCGG-CAGCTTACCGAACGATTGCGAGAGTTGCAGCTGCA 1285
consensus_7267#1      AATC-GCAGGAGCGTGATTTGCGG-CAGCTTACCGAACGATTGCGAGAGT---------- 914
                            **      *  *   *            *  *   *                  

consensus_7267#2      -
consensus_7267#3      -
consensus_7267#0      G 1286
consensus_7267#1      -
                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)