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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7273#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1593 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTCCGATCAAGGGCTACGATTACGATACAGCAACAAAGTTCTGCCTCGTTTAATTTATTGCATTCTCGCCATGTTCGGTTATTGAACGAGA-AAAAAAAACTTTCTCAACAAACCTTGCTGCCGCTGCTGTGCATCTTTCAAACCAGAAAATTAATAAAATGTACACGCTGTGCAAGCTACTGATTGCGCTGTGCTGTTTCACAACGCTAGCCCACAGTTCCCGGGTGCTCGAGCTAAGCGATCGGTTTCTGGACGTGCGGAACGAGGGCCAATGGTTCGTGATGTTCTATGCGCCCTGGTGCGCTCACTGCAAAAAGCTCGAGCCGGTGTGGGCGCTCGTCGCCCAGGCGCTGTACAACACGAACATCCGGGTCGGCCGGGTCGACTGCACACGCTTCACCGCGGTGGCGCAGCACTTTAAGGTCAACGCTTATCCGACGATTATTTTCGTTAAAGGACCGTACGATTATGTGTACAACGGGGAGCGTTCGAAGGAGGAGCTGATCCATTTCGTGAACCGCATGTCCGGCCCACCGGTGCAGCTGGTAACGCGTGCGGACAGTATCGACATCCTCAAGTCGAACAACCCGATCTTTTTCACGTACGTCGGCAAGCAGTCGGGATTGCTGTGGGACGTGTTTTACAGTGCGGCCGAGTCGTACCAGGCGCACGGTTACTTCTACGCCACCTCGGTCGAAATAGCGAAGCGGCACTTTGACGTGGACACGGTCCCGGCGGCGCTGGTGTACAAGGAGCGCAGCCACTACTACTTTCCCTACTCGGACAACTTCGAGCGGATCGAGCCGGCGCATCTGAACGACACGCTGTTCCGCTGGGTGAACGAGGAGCGGTTCGCCACCTTCCCGAAGGTGACGCGCAGCAACATTCACCATCTGGTGCAGACGCAAAAGTATCTCGTGCTGGCGGTGGTGGAGGAGAACAAGCTCAGCGAGATAGCGGCCCACGAGCAGGAGTTCCGCGACATGGTGGAGATCTTCGTGCACAAGAACAAGCACAAGTACCACGGGCGGTTCCAGTTCGGCTGGGTCGGTACGCCCGAGCTGGCCCGCTCGATCGCGATGGACAGCCTGCCGACGCCCCATCTGCTGGTGCTGAACGCGTCCACCAACGAGCACCACATCCCCGAGGACGATCCGCTCCAGCTGACGCCGGAAGCGATCGAGATCTTCCTCGACAGCATCCACAACCAGACGGCGCCCACGTTCGGTGGCAACTCGCTGCCGGTGCGCATCTACCGTGCCTGGTTCGAGGCCAAAACGTCCCTGTACGAAATGTGGATCGGCAATCCGGTGCTCACGACCGTGCTGTTCGGGCTGCCGCTCGGCTTCCTGTCGCTCATCATGTACTCGATCTGCTGTGCGGACATTCTCGACGCCGAGGAGGAGGACGACGGGGCCGACCAGCGACACGAGAAGAAGGAGTAAGGCGGTCAGGCTCAACGGTCAGGTGGTGTAGGTGCGGCTGGCCCATTAAAATCCATGACAGTTTGAAACGCGGCGAGAGGGAAGGCCCACTTCCACA]
[+] EMBL BM632587 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGTTATCAAGGGCTACGATTACGATACAGCAACAAAGTTCTGCCTCGTTTAATTTATTGCATTCTCGCCATGTTCGGTTATTGAACGAGA AAAAAAAACTTTCTCAACAAACCTTGCTGCCGCTGCTGTGCATCTTTCAAACCAGAAAATTAATAAAATGTACACGCTGTGCAAGCTACTGATTGCGCTGTGCTGTTTCACAACGCTAGCCCACAGTTCCCGGGTGCTCGAGCTAAGCGATCGGTTTCTGGACGTGCGGAACGAGGGCCAATGGTTCGTGATGTTCTATGCGCCCTGGTGCGCTCACTGCAAAAAGCTCGAGCCGGTGTGGGCGCTCGTCGCCCAGGCGCTGTACAACACGAACATCCGGGTCGGCCGGGTCGACTGCACACGCTTCACCGCGGTGGCGCAGCACTTTAAGGTCAACGCTTATCCGACGATTATTTTCGTTAAAGGACCGTACGATTATGTGTACAACGGGGAGCGTTCGAAGGAGGAGCTGATCCATTTCGTGAACCGCATGTCCGGCCCACCGGTGCAGCTGGTAACGCGTGCGGACAGTATCGACATCCTCAAGTCGAACAACCCGAT ]
[+] EMBL BM608787 [ CCGATCAAGGGCTACGATTACGATACAGCAACAAAGTTCTGCCTAGTTTAATTTATTGCATTCTCGCCATGTTCGGTTATTGAACGAGAGAAAAAAAACTTTCTCCACATACCTTGCTGCCGCAGCTGTGCACCTTTCAAACCCGAAAATTAATAAAATGTACACGCTGTGCAAGCTACTGATTGCGCTGTGCTGTTTCACAACGTTAGCCCACAGTTCCCGGGTGCTAGAGCTAAGCGATCGGTTTCTGGACCTGCGGAACGAGGGCCAATGGTTCGTGATGTTCTATGCGCCCTGGTGCGCTCACTGCAAAAAGCTCGAGCCGGTGTGGGCGCTCGTCGCCCAGGCGCTGTACAACACGAACATCCGGGTCGGCCGGGTCGACTGCACACGCTTCACCGCGGTGGCGCAGCACTTTAAGGTCAACGCTTATCCGACGATTATTTTCGTTAAAGGACCGTACGATTATGTGTACAACGGGGAGCGTTCGAAGGAGGAGCTGATCCATTTCGTGAACCGCATGTCCGGCCCACCGGTGCAGCTGGTAACGCGTGCGGACAGTATCGACATCCTCAAGTCGAACAACCCGATCTTTTTCACGTACGTCGGCAAGCAGTCGGGATTGCTGTGGGACGTGTTTTACA ]
[+] EMBL BM594581 [ CCGATCAAGGGCTACGATTACGATACAGCAACAAAGTTCTGCCTCGTTTAATTTATTGCATTCTCGCCATGTTCGGTTATTGAACGAGA AAAAAAAACTTTCTCAACAAACCTTGCTGCCGCTGCTGTGCATCTTTCAAACCAGAAAATTAATAAAATGTACACGCTGTGCAAGCTACTGATTGCGCTGTGCTGTTTCACAACGCTAGCCCACAGTTCCCGGGTGCTCGAGCTAAGCGATCGGTTTCTGGACGTGCGGAACGAGGGCCAATGGTTCGTGATGTTCTATGCGCCCTGGTGCGCTCACTGCAAAAAGCTCGAGCCGGTGTGGGCGCTCGTCGCCCAGGCGCTGTACAACACGAACATCCGGGTCGGCCGGGTCGACTGCACACGCTTCACCGCGGTGGCGCAGCACTTTAAGGTCAACGCTTATCCGACGATTATTTTCGTTAAAGGACCGTACGATTATGTGTACAACGGGGAGCGTTCGAAGGAGGAGCTGATCCATTTCGTGAACCGCATGTCCGGCCCACCGGTGCAGCTGGTAACGCGTGCGGACAGTATCGACATCCTCAAGTC ]
[+] EMBL BM609755 [ ccgGCGATCGGTTTCTGGACGTGCGGAACGAGGGCCAATGGTTCGTGATGTTCTATGCGCCCTGGTGCGCTCACTGCAAAAAGCTCGAGCCGGTGTGGGCGCTCGTCGCCCAGGCGCTGTACAACACGAACATCCGGGTCGGCCGGGTCGACTGCACACGCTTCACCGCGGTGGCGCAGCACTTTAAGGTCAACGCTTATCCGACGATTATTTTCGTTAAAGGACCGTACGATTATGTGTACAACGGGGAGCGTTCGAAGGAGGAGCTGATCCATTTCGTGAACCGCATGTCCGGCCCACCGGTGCAGCTGGTAACGCGTGCGGACAGTATCGACATCCTCAAGTCGAACAACCCGATCTTTTTCACGTACGTCGGCAAGCAGTCGGGATTGCTGTGGGACGTGTTTTACAGTGCGGCCGAGTCGTACCAGGCGCACGGTTACTTCTACGCCACCTCGGTCGAAATAGCGAAGCGGCACTTTGACGTGGACACGGTCCCGGCGGCGCTGGTGTACAAGGAGCGCAGCCACTACTACTTTCCCTACTCGGACAACTTCGAGCGGATCGAGCCGGCGCATCTGAACGACACGCTGTTCCGCTGGGTGAACGAGGAGCGGTTCGCCACCTTCCCGAAGGTGACGCGCAGCAACATT ]
[+] EMBL BX625441 [ TTTCGTGAACCGCATGTCCGGCCCACCGGTGCAGCTGGTAACGCGTGCGGACAGTATCGACATCCTCAAGTCGAACAATCCAATCTTTTTCACGTACGTCGGCAAGCAGTCGGGATTGCTGTGGGACGTGTTTTACAGTGCGGCCGAGTCGTACCAGGCGCACGGTTACTTCTACGCCACCTCGGTCGAAATAGCGAAGCGGCACTTTGACGTGGACACGGTCCCGGCGGCGCTGGTGTACAAGGAGCGCAGCCACTACTACTTCCCCTACTCGGACAACTTCGAGCGGATCGAGCCGGCGCATCTGAACGACACGCTGTTCCGCTGGGTGAACGAGGAGCGGTTCGCTACCTTCCCGAAGGTGACGCGCAGCAACATTCACCATCTGGTGCAGACGCAAAAGTATCTCGTGCTGGCGGTGGTGGAGGAGAACAAGCTCAGCGAGATAGCGGCCCACGAGCAGGAGTTCCGCGACATGGTGGAGATCTTCGTGCACAAGAACAAGCACAAGTACCACGGGCGGTTCCAGTTCGGCTGGGTCGGTACGCCCGAGCTGGCCCGCTCGATCGCGATGGACAGCCTGCCGACGCCCCATCTGCTGGTGCTGAACGCGTCCACCAACGAGCACCACATCCCCGAGGACGATCCGCTCCAGCTGACGCCGGAAGCGATCGAGATCTTCCTCGACAGCATCCACAACCAGACGGCGCCCACGTTCGGTGGCAACTCGCTGCCGGTGCGCATCTA ]
[+] EMBL BX609828 [ GCGGTTCCAGTTCGGCTGGGTCGGTACGCCCGAGCTGGCCTGCTCGATCGCGATGGACAGCCTGCCGACGCCCCATCTGCTGGTGCTGAACGCGTCCACCAACGAGCACCACATCCCCGAGGACGATCCGCTCCAGCTGACGCCGGAAGCGATCGAGATCTTCCTCGACAGCATCCACAACCAGACGGCGCCCACGTTCGGTGGCAACTCGCTGCCGGTGCGCATCTACCGTGCCTGGTTCGAGGCCAAAACGTCCCTGTACGAAATGTGGATCGGCAATCCGGTGCTCACGACCGTGCTGTTCGGGCTGCCGCTCGGCTTCCTGTCGCTCATCATGTACTCGATCTGCTGTGCGGACATTCTCGACGCCGAGGAGGAGGACGACGGGGCCGACCAGCGACACGAGAAGAAGGAGTAAGGCGGTCAGGCTCAACGGTCAGGTGGTGTAGGTGCGGCTGGCCCATTAAAATCCATGACAGTTTGAAACGCGGCGAGAGGGAAGGCCCACTTCCACA]
consensusID : consensus_7273#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 665 fasta sequence
[CCGCCCACGCGTCCGGGCTACGATTACGATACAGCAACAAAGTTCTGCCTCGTTTAATTTATTGCATTCTCGCCATGTTCGGTTATTGAACGAGAGAAAAAAAAAACTTTCTCAACAAACCTTGCTGCCACTGCTGTGCACCTTTCAAACCCGAAAATTAATAAAATGTACACGCTGTGCAAGCTACTGATTGCGCTGTGCTGTTTCACAACGCTAGCCCACAGTTCCCGGGTGCTCGAGCTAAGCGATCGGTTTCTGGACGTCCGGAACGAGGGCCAATGGTTCGTGATGTTCTATGCGCCCTGGTGCGCTCACTGCAAAAAGCTCGAGCCGGTGTGGGCGCTCGTCGCCCAGGCGCTGTACAACACGAACATCCGGGTCGGCCGGGTCGACTGCACACGCTTCACCGCGGTGGCGCAGCACTTTAAAGTCAACGCTTATCCGACGATTATTTTCGTTAAAGGACCATACGATTATGTGTACAACGGGGAGCGTTCGAAGGAGGAGCTGATCCATTTCGTGAACCGCATGTCCGGCCCACCGGTGCAGCTTGGTAACGCGTGCGGACAGTATCGACATCCTCAAGTCGAACAATCCAATCTTTTTCACGTACGTCGGCAAGCAGTCGGGATTGCTGTGGGACGTGTTTTACAGTGCGGGCGAGT]
[+] EMBL BM590951 [CCGCCCACGCGTCCGGGCTACGATTACGATACAGCAACAAAGTTCTGCCTCGTTTAATTTATTGCATTCTCGCCATGTTCGGTTATTGAACGAGAGAAAAAAAAAACTTTCTCAACAAACCTTGCTGCCACTGCTGTGCACCTTTCAAACCCGAAAATTAATAAAATGTACACGCTGTGCAAGCTACTGATTGCGCTGTGCTGTTTCACAACGCTAGCCCACAGTTCCCGGGTGCTCGAGCTAAGCGATCGGTTTCTGGACGTCCGGAACGAGGGCCAATGGTTCGTGATGTTCTATGCGCCCTGGTGCGCTCACTGCAAAAAGCTCGAGCCGGTGTGGGCGCTCGTCGCCCAGGCGCTGTACAACACGAACATCCGGGTCGGCCGGGTCGACTGCACACGCTTCACCGCGGTGGCGCAGCACTTTAAAGTCAACGCTTATCCGACGATTATTTTCGTTAAAGGACCATACGATTATGTGTACAACGGGGAGCGTTCGAAGGAGGAGCTGATCCATTTCGTGAACCGCATGTCCGGCCCACCGGTGCAGCTTGGTAACGCGTGCGGACAGTATCGACATCCTCAAGTCGAACAATCCAATCTTTTTCACGTACGTCGGCAAGCAGTCGGGATTGCTGTGGGACGTGTTTTACAGTGCGGGCGAGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7273#0 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTCCGATCA 60
consensus_7273#1 ------------------------------------CCGCCCACGCGTCC---------- 14
**************
consensus_7273#0 AGGGCTACGATTACGATACAGCAACAAAGTTCTGCCTCGTTTAATTTATTGCATTCTCGC 120
consensus_7273#1 -GGGCTACGATTACGATACAGCAACAAAGTTCTGCCTCGTTTAATTTATTGCATTCTCGC 73
***********************************************************
consensus_7273#0 CATGTTCGGTTATTGAACGAGA---AAAAAAAACTTTCTCAACAAACCTTGCTGCCGCTG 177
consensus_7273#1 CATGTTCGGTTATTGAACGAGAGAAAAAAAAAACTTTCTCAACAAACCTTGCTGCCACTG 133
********************** ******************************* ***
consensus_7273#0 CTGTGCATCTTTCAAACCAGAAAATTAATAAAATGTACACGCTGTGCAAGCTACTGATTG 237
consensus_7273#1 CTGTGCACCTTTCAAACCCGAAAATTAATAAAATGTACACGCTGTGCAAGCTACTGATTG 193
******* ********** *****************************************
consensus_7273#0 CGCTGTGCTGTTTCACAACGCTAGCCCACAGTTCCCGGGTGCTCGAGCTAAGCGATCGGT 297
consensus_7273#1 CGCTGTGCTGTTTCACAACGCTAGCCCACAGTTCCCGGGTGCTCGAGCTAAGCGATCGGT 253
************************************************************
consensus_7273#0 TTCTGGACGTGCGGAACGAGGGCCAATGGTTCGTGATGTTCTATGCGCCCTGGTGCGCTC 357
consensus_7273#1 TTCTGGACGTCCGGAACGAGGGCCAATGGTTCGTGATGTTCTATGCGCCCTGGTGCGCTC 313
********** *************************************************
consensus_7273#0 ACTGCAAAAAGCTCGAGCCGGTGTGGGCGCTCGTCGCCCAGGCGCTGTACAACACGAACA 417
consensus_7273#1 ACTGCAAAAAGCTCGAGCCGGTGTGGGCGCTCGTCGCCCAGGCGCTGTACAACACGAACA 373
************************************************************
consensus_7273#0 TCCGGGTCGGCCGGGTCGACTGCACACGCTTCACCGCGGTGGCGCAGCACTTTAAGGTCA 477
consensus_7273#1 TCCGGGTCGGCCGGGTCGACTGCACACGCTTCACCGCGGTGGCGCAGCACTTTAAAGTCA 433
******************************************************* ****
consensus_7273#0 ACGCTTATCCGACGATTATTTTCGTTAAAGGACCGTACGATTATGTGTACAACGGGGAGC 537
consensus_7273#1 ACGCTTATCCGACGATTATTTTCGTTAAAGGACCATACGATTATGTGTACAACGGGGAGC 493
********************************** *************************
consensus_7273#0 GTTCGAAGGAGGAGCTGATCCATTTCGTGAACCGCATGTCCGGCCCACCGGTGCAGCT-G 596
consensus_7273#1 GTTCGAAGGAGGAGCTGATCCATTTCGTGAACCGCATGTCCGGCCCACCGGTGCAGCTTG 553
********************************************************** *
consensus_7273#0 GTAACGCGTGCGGACAGTATCGACATCCTCAAGTCGAACAACCCGATCTTTTTCACGTAC 656
consensus_7273#1 GTAACGCGTGCGGACAGTATCGACATCCTCAAGTCGAACAATCCAATCTTTTTCACGTAC 613
***************************************** ** ***************
consensus_7273#0 GTCGGCAAGCAGTCGGGATTGCTGTGGGACGTGTTTTACAGTGCGGCCGAGTCGTACCAG 716
consensus_7273#1 GTCGGCAAGCAGTCGGGATTGCTGTGGGACGTGTTTTACAGTGCGGGCGAGT-------- 665
********************************************** *****
consensus_7273#0 GCGCACGGTTACTTCTACGCCACCTCGGTCGAAATAGCGAAGCGGCACTTTGACGTGGAC 776
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 ACGGTCCCGGCGGCGCTGGTGTACAAGGAGCGCAGCCACTACTACTTTCCCTACTCGGAC 836
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 AACTTCGAGCGGATCGAGCCGGCGCATCTGAACGACACGCTGTTCCGCTGGGTGAACGAG 896
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 GAGCGGTTCGCCACCTTCCCGAAGGTGACGCGCAGCAACATTCACCATCTGGTGCAGACG 956
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 CAAAAGTATCTCGTGCTGGCGGTGGTGGAGGAGAACAAGCTCAGCGAGATAGCGGCCCAC 1016
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 GAGCAGGAGTTCCGCGACATGGTGGAGATCTTCGTGCACAAGAACAAGCACAAGTACCAC 1076
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 GGGCGGTTCCAGTTCGGCTGGGTCGGTACGCCCGAGCTGGCCCGCTCGATCGCGATGGAC 1136
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 AGCCTGCCGACGCCCCATCTGCTGGTGCTGAACGCGTCCACCAACGAGCACCACATCCCC 1196
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 GAGGACGATCCGCTCCAGCTGACGCCGGAAGCGATCGAGATCTTCCTCGACAGCATCCAC 1256
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 AACCAGACGGCGCCCACGTTCGGTGGCAACTCGCTGCCGGTGCGCATCTACCGTGCCTGG 1316
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 TTCGAGGCCAAAACGTCCCTGTACGAAATGTGGATCGGCAATCCGGTGCTCACGACCGTG 1376
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 CTGTTCGGGCTGCCGCTCGGCTTCCTGTCGCTCATCATGTACTCGATCTGCTGTGCGGAC 1436
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 ATTCTCGACGCCGAGGAGGAGGACGACGGGGCCGACCAGCGACACGAGAAGAAGGAGTAA 1496
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 GGCGGTCAGGCTCAACGGTCAGGTGGTGTAGGTGCGGCTGGCCCATTAAAATCCATGACA 1556
consensus_7273#1 ------------------------------------------------------------
consensus_7273#0 GTTTGAAACGCGGCGAGAGGGAAGGCCCACTTCCACA 1593
consensus_7273#1 -------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||