Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7279 cluster # 7279       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7279#0 length = 1615 sequences # 7  

consensusID : consensus_7279#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1615
fasta sequence
                              [CCGGACCGATCTGATCATTGACACGTGCAATGCCGGCGCCGGCACGCTGGCCGTCACCGTCGACGGTCCGGCCAAGGTGGCGATGGACTGCACGGAGGTGGAGGAGGGCTACAAGGTGCGGTACACGCCGCTGCTACCGGGTCACTACTACATGACGATCAAGTACAACCAGATGCACATCGTTGGATCACCGTTCAAGATCAACTGTACCGGCGAGAGTCTCGCCGAGGCAGGCGGACAGGAAACGTCCTCGGTCATTGTGGAAACCGTGGCGAAGGTATCGAAGGGTGGCAACCGGACCGGTGTCATTTTGCCAATCTTCAAGTCGGACGCCAGCAAAATTCAGTCCAAGGGCATGGGTCTCAAGAAGGCGTACATGGGCAAGCAGAACCAGTTTACGATCAATGCCGGCGATGCGGGCAACAACATCCTTTTCGTGGGCATTTACGGACCGAAAGGACCGTGCGATGAGGTGTTCATCAAGCACACCGGACGCAACCAGTACACGGTCAACTACCTGGTTCGCGAGCGCGGCGATTACATTCTGCTTGTGAAATGGGGCGATGACCACATCCCCGGCTCACCGTTTAAGGTTGAAGTTTAAAGACCGTACAACCGTACAACCTCACAGACGCGCCATATCCAACACCACCACTACCACCCCCTCTGCCAAGCGACATCTGACATCGGAAGCACTCGCACACGAGGCAACGGTTTCTGTTTCCCCTTTTGCTCCCATTTTTATCCACCACCATGTGCGCGAACAGCATGGTCACTTGACGTTCTCCTTCACCATCCCTCCATCCACCAATCCCGATCGTAGCGGCGCCTCACAGACGCACGCAAGCCATAGGATGGATGCCTCTGTCCCCGTAAGTGTCGCGGAGAATCGCGAGCCCGAAAGCAGTCCTTGCCCCGTGTATGCTTTTAAAGTAGTGTGGTTAAGTTAAAGAAGCCGCTCTTTTGATCCAACATGTTATCG-TTTTATCGCGTTCTTCTATCCCAACACTGTTGTACTGCATCCATTCGGTTAGGAAGGTCGGTATTAAGACATGCATGAGCGCTTCGATCGTAAAATGAAAGCAGATCGT-TGTTTTACGTCCATTTTAATTACAACGCTCCCCCCCCCCCCCCCCTATCGCCTCTTTATCTACACTTACAATTGTTCAACTGATTGTTTTTTATAAGTTTTCCATCGCACGCTAATGCGTACCGTTTTTATGTTACTTGCTATAAGTAAGATCCGTTACTTTCAAACATCAAACATGCAAGTACGGTCGAAACCGCCAATCATCAGGTTAAGTGTTTATGTTTGTATTCATGTTTTATTTTTTTACATATATACTATTCGTATGCGGTAGCGCATTCACTCAATCCTTTCCACTATGCAGCGCTTTGGATTTTAATTTATTACGGTTATTTTTTCGTGTATTTTGTTTTTAGTCCCCATTCGTACCCCATAAAGCCCACACTCCCTGTGGAAACTATGATCACAGTCTAAATAAGGTTTAAGTAAAAG-TTGTCAAATCGAAACATTAAAAAGAGACAAAAAAATAAATAAAGCGATTGTGTAAACGAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCCCCATGTG]

[+] EMBL BM648657             [CCGGACCGATCTGATCATTGACACGTGCAATGCCGGCGCCGGCACGCTGGCCGTCACCGTCGACGGTCCGGCCAAGGTGGCGATGGACTGCACGGAGGTGGAGGAGGGCTACAAGGTGCGGTACACGCCGCTGCTACCGGGTCACTACTACATGACGATCAAGTACAACCAGATGCACATCGTTGGATCACCGTTCAAGATCAACTGTACCGGCGAGAGTCTCGCCGAGGCAGGCGGACAGGAAACGTCCTCGGTCATTGTGGAAACCGTGGCGAAGGTATCGAAGGGTGGCAACCGGACCGGTGTCATTTTGCCAATCTTCAAGTCGGACGCCAGCAAAATTCAGTCCAAGGGCATGGGTCTCAAGAAGGCGTACATGGGCAAGCAGAACCAGTTTACGATCAATGCCGGCGATGCGGGCAACAACATCCTTTTCGTGGGCATTTACGGACCGAAAGGACCGTGCGATGAGGTGTTCATCAAGCACACCGGACGCAACCAGTACACGGTCAACTACCTGGTTCGCGAGCGCGGCGATTACATTCTGCTTGTGAAATGGGGCGATGACCACATCCCCGGCTCACCGTTTAAGGTTGAAGTTTAAAGACCGTACAACCGTACAACCTCACAGACGCGCCATATCCAACACCACCACTACCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM646936             [                                                                                                                                                                                                                                                                                                                                                                                                           TTACGATCAATGCCGGCGATGCGGGCAACAACATCCTTTTCGTGGGCATTTACGGACCGAAAGGACCGTGCGATGAGGTGTTCATCAAGCACACCGGACGCAACCAGTACACGGTCAACTACCTGGTTCGCGAGCGCGGCGATTACATTCTGCTTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM580759             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgCAACCTCACAGACGCGCCATATCCAACACCACCACTACCACCCCCTCTGCCAAGCGACATCTGACATCGGAAGCACTCGCACACGAGGCAACGGTTTCTGCTTCCCCTTTTGCTCCCATTTTTATCCACCACCATGTGCGCGAACAGCATGGTCACTTGACGTTCTCCTTCACCATCCCTCCATCCACCAATCCCGATCGTAGCGGCGCCTCACAGACGCACGCAAGCCATAGGATGGATGCCTCTGTCCCCGTAAGTGTCGCAGAGAATCGCGAGCCCGAAAGCAGTCCTTGCCCCGTGTATGCTTTTAAAGTAGTGTGGTTAAGTTAAAGAAGCCGCTCTTTTGATCCAACATGTTATCG TTTTATCGCGTTCTTCTATCCCAACACTGTTGTACTGCATCCATTCGGTTAGGAAGGTCCGTATTAAGACATGCATGAGCGCTTCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AGA285443            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CACCACCACTACCACCCCCTCTGCCAAGCGACATCTGACATCGGAAGCACTCGCA       CAACGGTTTCTTTTTCCCCTTTTGCTCCCATTTTTATCCATCACCATGTGCGCGAACAGCATGGTCACTTGACGTTCTCCTTCACCATCCCTCCATCCACCAATCCCGATCGTAGCGGCGCCTCACAGACGCACGCAAGCCATAGGATGGATTCCTCTGTCCCCGTAAGTGTCGCGGAGAATCGCGAGCCCGAAAGCAGTCCTTGCCCCGTGTATGCTTTTAAAGTAGTGTGGTTAAGTTAAAGAAGCCGCTCTTTTGATCCAACATGTTATCGTTTTTATCGCGTTCTTCTATCCCAACACTGTTGTACTGCATCCATTCGGTTAGGAAGGTCGGTATTAAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX629064             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTCGCACACGAGGCAACGGTTTCTGTTTCCCCTTTTGCTCCCATTTTTATCCACCACCATGTGCGCGAACAGCATGGTCACTTGACGTTCTCCTTCACCATCCCTCCATCCACCAATCCCGATCGTAGCGGCACCTCACAGACGCACGAAAGCCATAGGATGGATGCCTCTGTCCCCGTAAGTGTCGCGGAGAATCGCGAGCCCGAAAGCAGTCCTTGCCCCGTGTATGCTTTTAAAGTAGTGTGGTTAAGTTAAAGAAGCCGCCCTTTTGATCCAACATGTTATCG TTTTATCGCGTTCTTCTATCCCAACACTGTTATACTGCATCCATTCGGTTAGGAAGGTCGGTATTAAGACATGCATGAGCGCTTCGATCGTAAAATGAAAGCAGATCGT TGTTTTACGTCCATTTTAATTACAACGCTCCCCCCCCCCCCCCCCTATCGCCTCTTTATCTACACTTACAATTGTTCAACTGATTGTTTTTTATAAGTTTCCCATCGCACGCTGATGCGTACCGTTTTTATGTTACTTGCTATAAGTAAGATCCGTTATTTTCAAACATCAAACATGCAAGTACGGTCGAAACCGCCAATCAT                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS08WC1             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ggGATCGTAAATTTTACGTCCATTTTAATTACAACGCT     CCCCCCACCCCTATCGCCTCTTTATCTACACTTACAATTGTTCAACTGATTGTTTTTTATAAGTTTTCCATCGCACGCTAATGCGTACCGTTTTTATGTTACTTGCTATAAGTAAGATCCGTTACTTTCAAACATCAAACATGCAAGTACGGTCGAAACCGCCAATCATCAGGTTAAGTGTTTATGTTTGTATTCATGTTTTATTTTTTTACATATATACTATTCGTATGCGGTAGCGCATTCACTCAATCCTTTCCACTATGCAGCGCTTTGGATTTTAATTTATTACGGTTATTTTTTCGTGTATTTTGTTTTTAGTCCCCATTCGTACCCCATAAAGCCCACACTCCCTGTGGAAACTATGATCACAGTCTAAATAAGGTTTAAGTAAAAGCTTGTCAAATCGAAACATTAAAAAGAGACAAAAAAATAAATAAAGCGATTGTGTAAACGAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCCCCATGTG]
[-] EMBL AGA284147            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TTTTTATAAGTTTTCCATCGCACGCTAATGCGTACCGTTTTTATGTTACTTGCTATAAGTAAGATCCGTTACTTTCAAACATCAAACATGCAAGTACGGTCGAAACCGCCAATCATCAGGTTAAGTGTTTATGTTTGTATTCATGTTTTATTTTTTTACATATATACTATTCGTATGCGGTAGCGCATTCACTCAATCCTTTCCACTATGCAGCGCTTTGGATTTTAATTTATTACGGTTATTTTTTCGTGTATTTTGTTTTTAGTCCCCATTCGTACCCCATAAAGCCCACACTCCCTGTGGAAACTATGATCACAGTCTAAATAAGGTTTAAGTAAAAG TTGTCAAATCGAAACATTAAAAAGAGACAAAAAAATAAATAAAGCGATTGTGTAACCGAAAAAAAA                              ]


>consensus_7279#0 CCGGACCGATCTGATCATTGACACGTGCAATGCCGGCGCCGGCACGCTGGCCGTCACCGT CGACGGTCCGGCCAAGGTGGCGATGGACTGCACGGAGGTGGAGGAGGGCTACAAGGTGCG GTACACGCCGCTGCTACCGGGTCACTACTACATGACGATCAAGTACAACCAGATGCACAT CGTTGGATCACCGTTCAAGATCAACTGTACCGGCGAGAGTCTCGCCGAGGCAGGCGGACA GGAAACGTCCTCGGTCATTGTGGAAACCGTGGCGAAGGTATCGAAGGGTGGCAACCGGAC CGGTGTCATTTTGCCAATCTTCAAGTCGGACGCCAGCAAAATTCAGTCCAAGGGCATGGG TCTCAAGAAGGCGTACATGGGCAAGCAGAACCAGTTTACGATCAATGCCGGCGATGCGGG CAACAACATCCTTTTCGTGGGCATTTACGGACCGAAAGGACCGTGCGATGAGGTGTTCAT CAAGCACACCGGACGCAACCAGTACACGGTCAACTACCTGGTTCGCGAGCGCGGCGATTA CATTCTGCTTGTGAAATGGGGCGATGACCACATCCCCGGCTCACCGTTTAAGGTTGAAGT TTAAAGACCGTACAACCGTACAACCTCACAGACGCGCCATATCCAACACCACCACTACCA CCCCCTCTGCCAAGCGACATCTGACATCGGAAGCACTCGCACACGAGGCAACGGTTTCTG TTTCCCCTTTTGCTCCCATTTTTATCCACCACCATGTGCGCGAACAGCATGGTCACTTGA CGTTCTCCTTCACCATCCCTCCATCCACCAATCCCGATCGTAGCGGCGCCTCACAGACGC ACGCAAGCCATAGGATGGATGCCTCTGTCCCCGTAAGTGTCGCGGAGAATCGCGAGCCCG AAAGCAGTCCTTGCCCCGTGTATGCTTTTAAAGTAGTGTGGTTAAGTTAAAGAAGCCGCT CTTTTGATCCAACATGTTATCGTTTTATCGCGTTCTTCTATCCCAACACTGTTGTACTGC ATCCATTCGGTTAGGAAGGTCGGTATTAAGACATGCATGAGCGCTTCGATCGTAAAATGA AAGCAGATCGTTGTTTTACGTCCATTTTAATTACAACGCTCCCCCCCCCCCCCCCCTATC GCCTCTTTATCTACACTTACAATTGTTCAACTGATTGTTTTTTATAAGTTTTCCATCGCA CGCTAATGCGTACCGTTTTTATGTTACTTGCTATAAGTAAGATCCGTTACTTTCAAACAT CAAACATGCAAGTACGGTCGAAACCGCCAATCATCAGGTTAAGTGTTTATGTTTGTATTC ATGTTTTATTTTTTTACATATATACTATTCGTATGCGGTAGCGCATTCACTCAATCCTTT CCACTATGCAGCGCTTTGGATTTTAATTTATTACGGTTATTTTTTCGTGTATTTTGTTTT TAGTCCCCATTCGTACCCCATAAAGCCCACACTCCCTGTGGAAACTATGATCACAGTCTA AATAAGGTTTAAGTAAAAGTTGTCAAATCGAAACATTAAAAAGAGACAAAAAAATAAATA AAGCGATTGTGTAAACGAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCCCCATGTG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)