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Anopheles gambiae
cluster # 7309 cluster # 7309       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7309#0 length = 2323 sequences # 6  
consensus_7309#1 length = 674 sequences # 1  

consensusID : consensus_7309#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2323
fasta sequence
                              [CCGCCCACGCGTCCGGTTCTGCCTCAGCAAACTCTAGCAAAATACACACTTAGTGGTGATAAAAACCTAGCAGCTCTTGCAGTTCTGCTTCTAGTGCTTCGGTTCATTATCTCGCCAACATATCGTGCAAAGTACCTCCGCCACCATGACGGATGCAAACAATATCTTGGCCCTGTTGCAGCGCCCTCTGGAACCGACCTTCCTGCCGAAGGATGACGGTAAGACGGTCATCGACCTGCCGGACGAGTTCCTTACCGACCGGTACCGGGCGATCGGGGCCGATCTGCAGTCCCGCTTCTCGAACGACGCCGAGCAGCGTATCCCGGTGCGATCGGTCCCGATGCCGGATCTGTCCTTTGCCAATGGAATCGATCGTCGTGGTGCGTTTTCGCTATTTGCGCCGAAGCATCGGGATGCCGCCGGCGCCCTGATCAATCTGTTCCTGCAGCAGCCCGACTTTGCGACGCTGATGAGTGTGGCCACGTACTGCCGCGATCGGCTCAACCCGGTGCTGTTCCAGTACAGCTTGGCGGTGGCCGTGCAGCATCGCGAAGACACCAAGGACGTGAACATCCCGTCGATCGTGTCGCTCTTCCCGGATCAGTTCGTCGATCCGGCCGTTTTCCCCAAGCTGCGCGAGGAAAGGTGCCGCGGTGCAGCAGGAGAACCGGATGGTGATTGACATTTCCGCCGAACTATACCGCCTCGGACCGGGAGGATGAGCAGCGGATGGCGTACTTCCGCGAGGATATCGGTGTCAACATGCACCACTGGCACTGGCATCTGGTGTACCCGGGCGATGGACCGGATGAGGTCGTGCGCAAGGATCGGCGCGGCGAGCTGTTCTTCTACATGCACAGCCAGCTGATTGCGCGCTATAATGCGGATCGGTTCTGCGCCAAGCTGAAGAAAGTGCGCAATCTGACCAACTACCGCGAGCCGATCGTCGAGGGCTACTACCCGAAGATGATCCGCAGCTCGAACAACCGGTCGTACCCGGCACGGGCCGCTAACACGACGCTGCAGGACGTCGATCGCGTCGACAACGGAACGACCGTATCCGTGAACGATCTCGAGCGGTGGCGCGATCGTATCCACGAGGCGATTGACCAGGGCTTCGTGCTGGACAAGAGCGGCAACCGCATCATGCTGGACGAGCAGCGCGGTATCGACATCCTCGGCGATGTGGTGGAAGCGTCCAGCCTGACCCCGAACGCTCAGCTGTATGGCAGTCTGCACAACATGGGCCACAACGTGATCGCGTACGTGCACGATCCGGACTACCGCTACCTGGAGGATTATGGCGTGATGGGCGACGTGACGACGGCGATGCGTGATCCGATCTTCTACCGCTGGCACGGCATGATTGACGGCATCTTCCGCCGCCACAAGGAGCTGCTGACGCCGTACACGGCCGAGCAGCTGGGCAACCCGGGTGTCACCGTCAACTCGGTCGGCGTGCAGCTGTCCCGGCCGAACACGCCCGCCAACGTGCTGCTCACGTACTGGCAGCGATCGCAGGTCGATCTGGCGGCTGGGTTGGACTTCGGTCCGAAGGGTAACGTGTTCGCGTCGTTCACCCATCTGCAGCACGCACCGTTCTCGTTCCGCGTGGAGGTGAACAATGAGTCGGGTGCGGTGCGCAAGGGAACGCTGCGTATCTGGCTTGCACCGAAGTCGGACGAGCGCGGCACTGCGCTGACATTCCGCGAGCAGCGTCGGTACTTTATCGAGATGGACACATCGACAGTGACGCTGAACCCGGGCATGAACACGATCGTGCGCCGTTCGGACCAATCAAGCGTTACCATCCCGTACGAGCGCACGTTCCGTGCGATCGGCACCAAGTCCGCCCCGACCGACAAAGATGCGCTGGCTCAGTTCCGCTTCTGCGGTTGCGGCTGGCCCCAGCACATGCTCGTCCCGAAGGGTTCGCCCGAAGGCGTCCAGTTCGATCTGTTTGCGATGGTGACCGATTTCGAGCAGGACTCCGTCGCCCAAGAACTTGACCCTAACGCACCGTGCAGCGATGCCCACTCGTTCTGCGGACTGCGCGACAAGAAGTATCCGGACCGTCGGGCCATGGGCTATCCGTTCGATCGTCGCACCGCGGACACGGTTGCCACGCTGGCTGACTTTGTCACCCCGAACTCGAACATGAAGACGGCCACGGTGCAGGTGAAGTTCAACAACACCGTGATTGCGCGCACCTAAAAAGCTTGACATTTTTATGCCCTACTATTGGAAAGATAACAGATAACAGCGAATAAAACTCAACACTCATAATCTCAACCTTTCTTCAGCATAAAAAAAAAAAAAAAAA]

[+] EMBL BM644390             [CCGCCCACGCGTCCGGTTCTGCCTCAGCAAACTCTAGCAAAATACACACTTAGTGGTGATAAAAACCTAGCAGCTCTTGCAGTTCTGCTTCTAGTGCTTCGGTTCATTATCTCGCCAACATATCGTGCAAAGTACCTCCGCCACCATGACGGATGCAAACAATATCTTGGCCCTGTTGCAGCGCCCTCTGGAACCGACCTTCCTGCCGAAGGATGACGGTAAGACGGTCATCGACCTGCCGGACGAGTTCCTTACCGACCGGTACCGGGCGATCGGGGCCGATCTGCAGTCCCGCTTCTCGAACGACGCCGAGCAGCGTATCCCGGTGCGATCGGTCCCGATGCCGGATCTGTCCTTTGCCAATGGAATCGATCGTCGTGGTGCGTTTTCGCTATTTGCGCCGAAGCATCGGGATGCCGCCGGCGCCCTGATCAATCTGTTCCTGCAGCAGCCCGACTTTGCGACGCTGATGAGTGTGGCCACGTACTGCCGCGATCGGCTCAACCCGGTGCTGTTCCAGTACAGCTTGGCGGTGGCCGTGCAGCATCGCGAAGACACCAAGGACGTGAACATCCCGTCGATCGTGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM646564             [            CCGGTTCTGCCTCAGCAAACTCTAGCAAAATACACACTTAGTGGTGATAAAAACCTAGCAGCTCTTGCAGTTCTGCTTCTAGTGCTTCGGTTCATTATCTCGCCAACATATCGTGCAAAGTACCTCCGCCACCATGACGGATGCAAACAATATCTTGGCCCTGTTGCAGCGCCCTCTGGAACCGACCTTCCTGCCGAAGGATGACGGTAAGACGGTCATCGACCTGCCGGACGAGTTCCTTACCGACCGGTACCGGGCGATCGGGGCCGATCTGCAGTCCCGCTTCTCGAACGACGCCGAGCAGCGTATCCCGGTGCGATCGGTCCCGATGCCGGATCTGTCCTTTGCCAATGGAATCGATCGTCGTGGTGCGTTTTCGCTATTTGCGCCGAAGCATCGGGATGCCGCCGGCGCCCTGATCAATCTGTTCCTGCAGCAGCCCGACTTTGCGACGCTGATGAGTGTGGCCACGTACTGCCGCGATCGGCTCAACCCGGTGCTGTTCCAGTACAGCTTGGCGGTGGCCGTGCAGCATCGCGAAGACACCAAGGACGTGAACATCCCGTCGATCGTGTCGCTCTTCCCGGATCAGTTCGTCGATCCGGCCGTTTTCCCCAAGCTGCGCGAGGAAAGGTGCCGCGGTGCAGCAGGAGAACCGGATGGTGATTGACATTTCCGCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AF004915             [                                                                                                                                                     CGGATGCAAACAATATCTTGGCCCTGTTGCAGCGCCCTCTGGAACCGACCTTCCTGCCGAAGGATGACGGTAAGACGGTCATCGACCTGCCGGACGAGTTCCTTACCGACCGGTACCGGGCGATCGGGGCCGATCTGCAGTCCCGCTTCTCGAACGACGCCGAGCAGCGTATCCCGGTGCGATCGGTCCCGATGCCGGATCTGTCCTTTGCCAATGGAATCGATCGTCGTGGTGCGTTTTCGCTATTTGCGCCGAAGCATCGGGATGCCGCCGGCGCCCTGATCAATCTGTTCCTGCAGCAGCCCGACTTTGCGACGCTGATGAGTGTGGCCACGTACTGCCGCGATCGGCTCAACCCGGTGCTGTTCCAGTACAGCTTGGCGGTGGCCGTGCAGCATCGCGAAGACACCAAGGACGTGAACATCCCGTCGATCGTGTCGCTCTTCCCGGATCAGTTCGTCGATCCGGCCGTTTTCCCCAAGCTGCGCGAGG AAGGTGCCGCGGTGCAGCAGGAGAACCGGATGGTGATTGACA TTCCGCCGAACTATACCGCCTCGGACCGGGAGGATGAGCAGCGGATGGCGTACTTCCGCGAGGATATCGGTGTCAACATGCACCACTGGCACTGGCATCTGGTGTACCCGGGCGATGGACCGGATGAGGTCGTGCGCAAGGATCGGCGCGGCGAGCTGTTCTTCTACATGCACAGCCAGCTGATTGCGCGCTATAATGCGGATCGGTTCTGCGCCAAGCTGAAGAAAGTGCGCAATCTGACCAACTACCGCGAGCCGATCGTCGAGGGCTACTACCCGAAGATGATCCGCAGCTCGAACAACCGGTCGTACCCGGCACGGGCCGCTAACACGACGCTGCAGGACGTCGATCGCGTCGACAACGGAACGACCGTATCCGTGAACGATCTCGAGCGGTGGCGCGATCGTATCCACGAGGCGATTGACCAGGGCTTCGTGCTGGACAAGAGCGGCAACCGCATCATGCTGGACGAGCAGCGCGGTATCGACATCCTCGGCGATGTGGTGGAAGCGTCCAGCCTGACCCCGAACGCTCAGCTGTATGGCAGTCTGCACAACATGGGCCACAACGTGATCGCGTACGTGCACGATCCGGACTACCGCTACCTGGAGGATTATGGCGTGATGGGCGACGTGACGACGGCGATGCGTGATCCGATCTTCTACCGCTGGCACGGCATGATTGACGGCATCTTCCGCCGCCACAAGGAGCTGCTGACGCCGTACACGGCCGAGCAGCTGGGCAACCCGGGTGTCACCGTCAACTCGGTCGGCGTGCAGCTGTCCCGGCCGAACACGCCCGCCAACGTGCTGCTCACGTACTGGCAGCGATCGCAGGTCGATCTGGCGGCTGGGTTGGACTTCGGTCCGAAGGGTAACGTGTTCGCGTCGTTCACCCATCTGCAGCACGCACCGTTCTCGTTCCGCGTGGAGGTGAACAATGAGTCGGGTGCGGTGCGCAAGGGAACGCTGCGTATCTGGCTTGCACCGAAGTCGGACGAGCGCGGCACTGCGCTGACATTCCGCGAGCAGCGTCGGTACTTTATCGAGATGGACACATCGACAGTGACGCTGAACCCGGGCATGAACACGATCGTGCGCCGTTCGGACCAATCAAGCGTTACCATCCCGTACGAGCGCACGTTCCGTGCGATCGGCACCAAGTCCGCCCCGACCGACAAAGATGCGCTGGCTCAGTTCCGCTTCTGCGGTTGCGGCTGGCCCCAGCACATGCTCGTCCCGAAGGGGTTGCCCGAAGGCGTCCAGTTCGATCTGTTTGCGATGGTGACCGATTTCGAGCAGGACTCCGTCGCCCAAGAACTTGACCCTAACGCACCGTGCAGCGATGCCCACTCGTTCTGCGGACTGCGCGACAAGAAGTATCCGGACCGTCGGGCCATGGGCTATCCGTTCGATCGTCGCACCGCGGACACGGTTGCCACGCTGGCTGACTTTGTCACCCCGAACTCGAACATGAAGACGGCCACGGTGCAGGTGAAGTTCAACAACACCGTGATTGCGCGCACCTAAAAAGCTTGACATTTTTATGCCCTACTATTGGAAAGATAACAGATAACAGCGAATAAAACTCAACACTCATAATCTCAACCTTTCTTCAGCATAAAAAAAAAAAAAAAAA]
[+] EMBL BX603669             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CACTGGCATCTGGTGTACCCGGGCGATGGACCGGATGAGGTCGTGCGCAAGGATCGGCGCGGCGAGCTGTTCTTCTACATGCACAGCCAGCTGATTGCGCGCTATAATGCGGATCGGTTCTGCGCCAAGCTGAAGAAAGTGCGCAATCTGACCAACTACCGCGAGCCGATCGTCGAGGGCTACTACCCGAAGATGATCCGCAGCTCGAACAACCGGTCGTACCCGGCACGGGCCGCTAACACGACGCTGCAGGACGTCGATCGCGTCGACAATGGAACGACCGTATCCGTGAACGATCTCGAGCGGTGGCGCGATCGTATCCACGAGGCGATTGACCAGGGCTTCGTGCTGGACAAGAGCGGCAACCGCATCATGCTGGACGAGCAGCGCGGTATCGACATCCTCGGCGATGTGGTGGAAGCGTCCAGCCTTACCCCGAACGCTCAGCTGTATGGCAGTCTGCACAACATGGGCCACAACGTGATCGCGTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM644908             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgCACGTACTGGCAGCGATCGCAGGTCGATCTGGCGGCTGGGTTGGACTTCGGTCCGAAGGGTAACGTGTTCGCGTCGTTCACCCATCTGCAGCACGCACCGTTCTCGTTCCGCGTGGAGGTGAACAATGAGTCGGGTGCGGTGCGCAAGGGAACGCTGCGTATCTGGCTTGCACCGAAGTCGGACGAGCGCGGCACTGCGCTGACATTCCGCGAGCAGCGTCGGTACTTTATCGAGATGGACACATCGACAGTGACGCTGAACCCGGGCATGAACACGATCGTGCGCCGTTCGGACCAATCAAGCGTTACCATCCCGTACGAGCGCACGTTCCGTGCGATCGGCACCAAGTCCGCCCCGACCGACAAAGATGCGCTGGCTCAGTTCCGCTTCTGCGGTTGCGGCTGGCCCCAGCACATGCTCGTCCCGAAGGGTTCGCCCGAAGGCGTCCAGTTCGATCTGTTTGCGATGGTGACCGATTTCGAGCAGGACTCCGTCGCCCAAGAACTTGACCCTAACGCACCGTGCAGCGATGCCCACTCGTTCTGCGGACTGCGCGACAAGAAGTATCCGGACCGTCGGGCCATGGGCTATCCGTTCGAT                                                                                                                                                                                                                               ]
[+] EMBL BX616753             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACGCTGCGTATCTGGCTTGCACCGAAGTCGGACGAGCGCGGCACTGCGCTGACATTCCGCGAGCAGCGTCGGTACTTTATCGAGATGGACACATCGACAGTGACGCTGAACCCGGGCATGAACACGATCGTGCGCCGTTCGGACCAATCAAGCGTTACCATCCCGTACGAGCGCACGTTCCGTGCGATCGGCACCAAGTCCGCCCCGACCGACAAAGATGCGCTGGCTCAGTTCCGCTTCTGCGGTTGCGGCTGGCCCCAGCACATGCTCGTCCCGAAGGGTTCGCCCGAAGGCGTCCAGTTCGATCTGTTTGCGATGGTGACCGATTTCGAGCAGGACTCCGTCGCCCAAGAACTTGACCCTAACGCACCGTGCAGCGATGCCCACTCGTTCTGCGGACTGCGCGACAAGAAGTATCCGGACCGTCGGGCCATGGGCTATCCGTTCGATCGTCGCACCGCGGACACGGTTGCCACGCTGGCTGACTTTGTCACCCCGAACTCGAACATGAAGACGGCCACGGTGCAGGTGAAGTTCAACAACACCGTGATTGCGCGCACCTAAAAAGCTTGACATTTTTATGCCCTACTATTGGAAAGATAACAGATAACAGCGAATAAAACTCAACACTCATAATCTCAACCTT                           ]


>consensus_7309#0 CCGCCCACGCGTCCGGTTCTGCCTCAGCAAACTCTAGCAAAATACACACTTAGTGGTGAT AAAAACCTAGCAGCTCTTGCAGTTCTGCTTCTAGTGCTTCGGTTCATTATCTCGCCAACA TATCGTGCAAAGTACCTCCGCCACCATGACGGATGCAAACAATATCTTGGCCCTGTTGCA GCGCCCTCTGGAACCGACCTTCCTGCCGAAGGATGACGGTAAGACGGTCATCGACCTGCC GGACGAGTTCCTTACCGACCGGTACCGGGCGATCGGGGCCGATCTGCAGTCCCGCTTCTC GAACGACGCCGAGCAGCGTATCCCGGTGCGATCGGTCCCGATGCCGGATCTGTCCTTTGC CAATGGAATCGATCGTCGTGGTGCGTTTTCGCTATTTGCGCCGAAGCATCGGGATGCCGC CGGCGCCCTGATCAATCTGTTCCTGCAGCAGCCCGACTTTGCGACGCTGATGAGTGTGGC CACGTACTGCCGCGATCGGCTCAACCCGGTGCTGTTCCAGTACAGCTTGGCGGTGGCCGT GCAGCATCGCGAAGACACCAAGGACGTGAACATCCCGTCGATCGTGTCGCTCTTCCCGGA TCAGTTCGTCGATCCGGCCGTTTTCCCCAAGCTGCGCGAGGAAAGGTGCCGCGGTGCAGC AGGAGAACCGGATGGTGATTGACATTTCCGCCGAACTATACCGCCTCGGACCGGGAGGAT GAGCAGCGGATGGCGTACTTCCGCGAGGATATCGGTGTCAACATGCACCACTGGCACTGG CATCTGGTGTACCCGGGCGATGGACCGGATGAGGTCGTGCGCAAGGATCGGCGCGGCGAG CTGTTCTTCTACATGCACAGCCAGCTGATTGCGCGCTATAATGCGGATCGGTTCTGCGCC AAGCTGAAGAAAGTGCGCAATCTGACCAACTACCGCGAGCCGATCGTCGAGGGCTACTAC CCGAAGATGATCCGCAGCTCGAACAACCGGTCGTACCCGGCACGGGCCGCTAACACGACG CTGCAGGACGTCGATCGCGTCGACAACGGAACGACCGTATCCGTGAACGATCTCGAGCGG TGGCGCGATCGTATCCACGAGGCGATTGACCAGGGCTTCGTGCTGGACAAGAGCGGCAAC CGCATCATGCTGGACGAGCAGCGCGGTATCGACATCCTCGGCGATGTGGTGGAAGCGTCC AGCCTGACCCCGAACGCTCAGCTGTATGGCAGTCTGCACAACATGGGCCACAACGTGATC GCGTACGTGCACGATCCGGACTACCGCTACCTGGAGGATTATGGCGTGATGGGCGACGTG ACGACGGCGATGCGTGATCCGATCTTCTACCGCTGGCACGGCATGATTGACGGCATCTTC CGCCGCCACAAGGAGCTGCTGACGCCGTACACGGCCGAGCAGCTGGGCAACCCGGGTGTC ACCGTCAACTCGGTCGGCGTGCAGCTGTCCCGGCCGAACACGCCCGCCAACGTGCTGCTC ACGTACTGGCAGCGATCGCAGGTCGATCTGGCGGCTGGGTTGGACTTCGGTCCGAAGGGT AACGTGTTCGCGTCGTTCACCCATCTGCAGCACGCACCGTTCTCGTTCCGCGTGGAGGTG AACAATGAGTCGGGTGCGGTGCGCAAGGGAACGCTGCGTATCTGGCTTGCACCGAAGTCG GACGAGCGCGGCACTGCGCTGACATTCCGCGAGCAGCGTCGGTACTTTATCGAGATGGAC ACATCGACAGTGACGCTGAACCCGGGCATGAACACGATCGTGCGCCGTTCGGACCAATCA AGCGTTACCATCCCGTACGAGCGCACGTTCCGTGCGATCGGCACCAAGTCCGCCCCGACC GACAAAGATGCGCTGGCTCAGTTCCGCTTCTGCGGTTGCGGCTGGCCCCAGCACATGCTC GTCCCGAAGGGTTCGCCCGAAGGCGTCCAGTTCGATCTGTTTGCGATGGTGACCGATTTC GAGCAGGACTCCGTCGCCCAAGAACTTGACCCTAACGCACCGTGCAGCGATGCCCACTCG TTCTGCGGACTGCGCGACAAGAAGTATCCGGACCGTCGGGCCATGGGCTATCCGTTCGAT CGTCGCACCGCGGACACGGTTGCCACGCTGGCTGACTTTGTCACCCCGAACTCGAACATG AAGACGGCCACGGTGCAGGTGAAGTTCAACAACACCGTGATTGCGCGCACCTAAAAAGCT TGACATTTTTATGCCCTACTATTGGAAAGATAACAGATAACAGCGAATAAAACTCAACAC TCATAATCTCAACCTTTCTTCAGCATAAAAAAAAAAAAAAAAA



consensusID : consensus_7309#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 674
fasta sequence
                              [AATCCCCCAGGTTATTGATGTNGTGGAGCGTCAAACTGACCCGAATGCGTCAATGTATTGAGTCTGNACAAAATTGGGCAACAAGTGATCGCGTACGTGTCACGANACCGGAATAACGCTAACTGGAGGATTATAGGCGTGATGGGCGACGTGACGACGGCGATGCTGTGATCCCGATCTTCTAACTGCTGGGCACGGGATGATTGACGGATCTTCCGCTGGCACAAGTGAGCTGTGACGCCGTACACTGGCTGAGCAGCTGGGCAACCTGGGTGTCACCTGTCAACTCGGTCGGCGTGCAGCTGTCCCGGCGAACACTGCCCGCAACTGTGCTGCTCACTGTACTGGCAGCTGATCGCAGGTCTGATCTGGCTGGCTGGGTTTGGACTTCGGTCCGAAGGGTAACGTGTTCGCGTCGTTCAACCATCTTGAGACGCACCGTTACTCGTTCCCAGCGTGGAGGTTAACAACTGAGTCNGGTGCGGTGCGCAAGGGAACCGCTGGTATCCTGGCTTGCACCGAAGTCGGACAGAACTGCGGCACNTGGCGCTGACATTTCCGCGAGCAAGGCGTCCGGTACTTTATCGAAGATTGACACAATNCGACAGTGACNGCTTGAAACCGGGGCCATTTAACACGATACGGTGCGCCGGTCGGACCAATCAAAGCCGTTA]

[+] EMBL AL930924             [AATCCCCCAGGTTATTGATGTNGTGGAGCGTCAAACTGACCCGAATGCGTCAATGTATTGAGTCTGNACAAAATTGGGCAACAAGTGATCGCGTACGTGTCACGANACCGGAATAACGCTAACTGGAGGATTATAGGCGTGATGGGCGACGTGACGACGGCGATGCTGTGATCCCGATCTTCTAACTGCTGGGCACGGGATGATTGACGGATCTTCCGCTGGCACAAGTGAGCTGTGACGCCGTACACTGGCTGAGCAGCTGGGCAACCTGGGTGTCACCTGTCAACTCGGTCGGCGTGCAGCTGTCCCGGCGAACACTGCCCGCAACTGTGCTGCTCACTGTACTGGCAGCTGATCGCAGGTCTGATCTGGCTGGCTGGGTTTGGACTTCGGTCCGAAGGGTAACGTGTTCGCGTCGTTCAACCATCTTGAGACGCACCGTTACTCGTTCCCAGCGTGGAGGTTAACAACTGAGTCNGGTGCGGTGCGCAAGGGAACCGCTGGTATCCTGGCTTGCACCGAAGTCGGACAGAACTGCGGCACNTGGCGCTGACATTTCCGCGAGCAAGGCGTCCGGTACTTTATCGAAGATTGACACAATNCGACAGTGACNGCTTGAAACCGGGGCCATTTAACACGATACGGTGCGCCGGTCGGACCAATCAAAGCCGTTA]


>consensus_7309#1 AATCCCCCAGGTTATTGATGTNGTGGAGCGTCAAACTGACCCGAATGCGTCAATGTATTG AGTCTGNACAAAATTGGGCAACAAGTGATCGCGTACGTGTCACGANACCGGAATAACGCT AACTGGAGGATTATAGGCGTGATGGGCGACGTGACGACGGCGATGCTGTGATCCCGATCT TCTAACTGCTGGGCACGGGATGATTGACGGATCTTCCGCTGGCACAAGTGAGCTGTGACG CCGTACACTGGCTGAGCAGCTGGGCAACCTGGGTGTCACCTGTCAACTCGGTCGGCGTGC AGCTGTCCCGGCGAACACTGCCCGCAACTGTGCTGCTCACTGTACTGGCAGCTGATCGCA GGTCTGATCTGGCTGGCTGGGTTTGGACTTCGGTCCGAAGGGTAACGTGTTCGCGTCGTT CAACCATCTTGAGACGCACCGTTACTCGTTCCCAGCGTGGAGGTTAACAACTGAGTCNGG TGCGGTGCGCAAGGGAACCGCTGGTATCCTGGCTTGCACCGAAGTCGGACAGAACTGCGG CACNTGGCGCTGACATTTCCGCGAGCAAGGCGTCCGGTACTTTATCGAAGATTGACACAA TNCGACAGTGACNGCTTGAAACCGGGGCCATTTAACACGATACGGTGCGCCGGTCGGACC AATCAAAGCCGTTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7309#0      CCGCCCACGCGTCCGGTTCTGCCTCAGCAAACTCTAGCAAAATACACACTTAGTGGTGAT 60
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      AAAAACCTAGCAGCTCTTGCAGTTCTGCTTCTAGTGCTTCGGTTCATTATCTCGCCAACA 120
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      TATCGTGCAAAGTACCTCCGCCACCATGACGGATGCAAACAATATCTTGGCCCTGTTGCA 180
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      GCGCCCTCTGGAACCGACCTTCCTGCCGAAGGATGACGGTAAGACGGTCATCGACCTGCC 240
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      GGACGAGTTCCTTACCGACCGGTACCGGGCGATCGGGGCCGATCTGCAGTCCCGCTTCTC 300
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      GAACGACGCCGAGCAGCGTATCCCGGTGCGATCGGTCCCGATGCCGGATCTGTCCTTTGC 360
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      CAATGGAATCGATCGTCGTGGTGCGTTTTCGCTATTTGCGCCGAAGCATCGGGATGCCGC 420
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      CGGCGCCCTGATCAATCTGTTCCTGCAGCAGCCCGACTTTGCGACGCTGATGAGTGTGGC 480
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      CACGTACTGCCGCGATCGGCTCAACCCGGTGCTGTTCCAGTACAGCTTGGCGGTGGCCGT 540
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      GCAGCATCGCGAAGACACCAAGGACGTGAACATCCCGTCGATCGTGTCGCTCTTCCCGGA 600
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      TCAGTTCGTCGATCCGGCCGTTTTCCCCAAGCTGCGCGAGGAAAGGTGCCGCGGTGCAGC 660
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      AGGAGAACCGGATGGTGATTGACATTTCCGCCGAACTATACCGCCTCGGACCGGGAGGAT 720
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      GAGCAGCGGATGGCGTACTTCCGCGAGGATATCGGTGTCAACATGCACCACTGGCACTGG 780
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      CATCTGGTGTACCCGGGCGATGGACCGGATGAGGTCGTGCGCAAGGATCGGCGCGGCGAG 840
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      CTGTTCTTCTACATGCACAGCCAGCTGATTGCGCGCTATAATGCGGATCGGTTCTGCGCC 900
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      AAGCTGAAGAAAGTGCGCAATCTGACCAACTACCGCGAGCCGATCGTCGAGGGCTACTAC 960
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      CCGAAGATGATCCGCAGCTCGAACAACCGGTCGTACCCGGCACGGGCCGCTAACACGACG 1020
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      CTGCAGGACGTCGATCGCGTCGACAACGGAACGACCGTATCCGTGAACGATCTCGAGCGG 1080
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      TGGCGCGATCGTATCCACGAGGCGATTGACCAGGGCTTCGTGCTGGACAAGAGCGGCAAC 1140
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      CGCATCATGCTGGACGAGCAGCGCGGTATCGACATCCTCGGCGATGTGGTGGAAGCGTCC 1200
consensus_7309#1      --------------------------AATCCCCCAGGTTATTGATGTNGTGGA-GCGTC- 32
                                                 ***  *    *    ***** ***** ***** 

consensus_7309#0      AGCCTGACCCCGAACGCTCAGCTGTATGGCAGTCTGCACAACATGGGCCACAACGTGATC 1260
consensus_7309#1      AAACTGACCC-GAATGCGTCAATGTATTG-AGTCTGNACAAAATTGGGCAACAAGTGATC 90
                      *  ******* *** **     ***** * ****** **** ** ** **  * ******

consensus_7309#0      GCGTACGTG-CACGAT-CCGGACTACCGCTACCTGGAGGATTAT-GGCGTGATGGGCGAC 1317
consensus_7309#1      GCGTACGTGTCACGANACCGGAATAACGCTAACTGGAGGATTATAGGCGTGATGGGCGAC 150
                      ********* *****  ***** ** ***** ************ ***************

consensus_7309#0      GTGACGACGGCGATGC-GTGATCC-GATCTTCTA-CCGCTGG-CACGGCATGATTGACGG 1373
consensus_7309#1      GTGACGACGGCGATGCTGTGATCCCGATCTTCTAACTGCTGGGCACGGGATGATTGACGG 210
                      **************** ******* ********* * ***** ***** ***********

consensus_7309#0      CATCTTCCGCCGCCACAAG-GAGCTGCTGACGCCGTACAC-GGCCGAGCAGCTGGGCAAC 1431
consensus_7309#1      -ATCTTCCGCTGGCACAAGTGAGCTG-TGACGCCGTACACTGGCTGAGCAGCTGGGCAAC 268
                       ********* * ****** ****** ************* *** ***************

consensus_7309#0      CCGGGTGTCACC-GTCAACTCGGTCGGCGTGCAGCTGTCCCGGCCGAACAC-GCCCGCCA 1489
consensus_7309#1      CTGGGTGTCACCTGTCAACTCGGTCGGCGTGCAGCTGTCCCGGC-GAACACTGCCCGCAA 327
                      * ********** ******************************* ****** ****** *

consensus_7309#0      ACGTGCTGCTCAC-GTACTGGCAGC-GATCGCAGGTC-GATCTGGC-GGCTGGGTT-GGA 1544
consensus_7309#1      CTGTGCTGCTCACTGTACTGGCAGCTGATCGCAGGTCTGATCTGGCTGGCTGGGTTTGGA 387
                        *********** *********** *********** ******** ********* ***

consensus_7309#0      CTTCGGTCCGAAGGGTAACGTGTTCGCGTCGTTCACCCATCTGCAGCACGCACCGTT-CT 1603
consensus_7309#1      CTTCGGTCCGAAGGGTAACGTGTTCGCGTCGTTCAACCATCTTGAG-ACGCACCGTTACT 446
                      *********************************** ******  ** ********** **

consensus_7309#0      CGTTCC--GCGTGGAGGTGAACAA-TGAGTCGGGTGCGGTGCGCAAGGGAACGCTGCGTA 1660
consensus_7309#1      CGTTCCCAGCGTGGAGGTTAACAACTGAGTCNGGTGCGGTGCGCAAGGGAACCGCTGGTA 506
                      ******  ********** ***** ****** ********************     ***

consensus_7309#0      TC-TGGCTTGCACCGAAGTCGGACGAG--CGCGGCACT--GCGCTGACATT-CCGCGAGC 1714
consensus_7309#1      TCCTGGCTTGCACCGAAGTCGGACAGAACTGCGGCACNTGGCGCTGACATTTCCGCGAGC 566
                      ** *********************      *******   *********** ********

consensus_7309#0      A--GCGTC-GGTACTTTATCGA-GATGGACACA--TCGACAGTGACG--CTGAACCCGGG 1766
consensus_7309#1      AAGGCGTCCGGTACTTTATCGAAGATTGACACAATNCGACAGTGACNGCTTGAAACCGGG 626
                      *  ***** ************* *** ******   **********    **** *****

consensus_7309#0      --CATG-AACACGATC--GTGCGCCGTTCGGACCAATCAAG--CGTTACCATCCCGTACG 1819
consensus_7309#1      GCCATTTAACACGATACGGTGCGCCGGTCGGACCAATCAAAGCCGTTA------------ 674
                        ***  ********   ******** *************   *****            

consensus_7309#0      AGCGCACGTTCCGTGCGATCGGCACCAAGTCCGCCCCGACCGACAAAGATGCGCTGGCTC 1879
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      AGTTCCGCTTCTGCGGTTGCGGCTGGCCCCAGCACATGCTCGTCCCGAAGGGTTCGCCCG 1939
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      AAGGCGTCCAGTTCGATCTGTTTGCGATGGTGACCGATTTCGAGCAGGACTCCGTCGCCC 1999
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      AAGAACTTGACCCTAACGCACCGTGCAGCGATGCCCACTCGTTCTGCGGACTGCGCGACA 2059
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      AGAAGTATCCGGACCGTCGGGCCATGGGCTATCCGTTCGATCGTCGCACCGCGGACACGG 2119
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      TTGCCACGCTGGCTGACTTTGTCACCCCGAACTCGAACATGAAGACGGCCACGGTGCAGG 2179
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      TGAAGTTCAACAACACCGTGATTGCGCGCACCTAAAAAGCTTGACATTTTTATGCCCTAC 2239
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      TATTGGAAAGATAACAGATAACAGCGAATAAAACTCAACACTCATAATCTCAACCTTTCT 2299
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      TCAGCATAAAAAAAAAAAAAAAAA 2323
consensus_7309#1      ------------------------
                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)