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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7330#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1002 fasta sequence
[CCCGAGGTTTAGGGTAAGATAATCCGTCCACAACTGACAATGCATCGATACGTAGCGCTGGTAGCCGTTCTGGTCGTCTCGGTAGCCGCCGAAGCCCCCTATCCCGCATCCGGATGGCGTCCGGAAGGGGCACAGTTCCGCTTGCCAACGGAATACGGTGCACCGTTGCTGTTGCTCCAGCCGCAGCCTCGCCGTGTTGAGGTACAAATTACTCGCGAAAACGTACAGTTTGCAGGGCGTCAGATCGCCCAAGAGCAGGTGCCCGTTACAACCACCACCGTTGAACCAGTGAC-GCAGACGACTCCGGTCACAACAACGACCACCGAGCAGGCGGATCTGGATCCACTCAAGGTACAAGGACTCCCGTCGGACCAACGCAAAGACTTCCAGCAGCGTGCCAATCTCCGTCAG-CAGGTCGTAAATCGTCCGCTTCCCGCCAACATTGCCCAGCGTCCACTGTTCCCGGTGAGTGGACAACTTC-GTGCCCTGCCGGCCGTACGAGGACCTGTATTCCAGCAACAAGTGGCTCAGCAACCGCAGCAAATCCAACCGCAAGCTGTGCCGGCTGAATCCTACGGTCCACCGGAGCAGGAAGAAGAGCAGCAGCAGCCGGAAGAGCTACCCGCCACCACTGAGCAGCCGCAGGTGCCGCAGGACGAAGGCGACGATGACTACGACGAGGATGACGCCGGACGTACGGTGGTGGCCGTTTCCAACGCATTCTCCGGACAGTACTACATTCTGGCACCGGACAACACCCTGCAGCGCGTCATCTACAGTACCATGGTCACGGATGANGATCGTCANGTGAATGGGTTTTCCGCCCAGCTGAAGTACTCACCGGNGGATCCTATCCGCGATCCGGTCTACACGTACGACNAA-AAGGACAGCTGGTTCGCATCTACAAGAAGTGAGAGATGTTTAACGATTCACGGCATTGATGCGTATCTAAAAGCAATGGCTACCTTTTTTGNTAAATATTTTAAAGNTTTTGAGNTTTTG]
[+] EMBL AL693337 [CCCGAGGTTTAGGGTAAGATAATCCGTCCACAACTGAC ATGCATTGATACGTAGCGCTGGTAGCCGTTCTGGTCGTCTCGGTAGCCGCCGAAGCCCCCTATCCCGCATCCGGATGGCGTCCGGAAGGGGCACAGTTCCGCTTGCCAACGGAATACGGTGCACCGTTGCTGTTGCTCCAGCCGCAGCCTCGCCGTGTTGAGGTACAAATTACTCGCGAAAACGTACAGTTTGCAGGGCGTCAGATCGCCCAAGAGCAGGTGCCCGTTACAACCACCACCGTTGAACCAGTGACTGCAGACGACTCCGGTCACAACAACGA CACCGAGCAGGCGGATCTGGATCCACTCAAGGTACAAGGACTCCCGTCGGACCAACGCAAAGACTTCCAGCAGCGTGCCAATCTCCGTCAGCCAGGTCGTAAATCGTCCGCTTCCCGCCAACATTGCCCAGCGTCCACTGTTCCCGGTGAGTGGACAACTTCAGTGCCCTG CGG CGTACGAGGACCTGTATTCCAGCAACAAGTGGCTCAGCAACCGCAGCAAATCCAAACGCAAGCTGTGCCGGCTGAATCCTACGGTCCACCGGAGCAGGAAGAAGAGCAGCAGCAG CGGA ]
[+] EMBL BM648189 [ ccGATAATCCGTCCACAACTGACAATGCATCGATACGTAGCGCTGGTAGCCGTTCTGGTCGTCTCGGTAGCCGCCGAAGCCCCCTATCCCGCATCCGGATGGCGTCCGGAAGGGGCACAGTTCCGCTTGCCAACGGAATACGGTGCACCGTTGCTGTTGCTCCAGCCGCAGCCTCGCCGTGTTGAGGTACAAATTACTCGCGAAAACGTACAGTTTGCAGGGCGTCAGATCGCCCAAGAGCAGGTGCCCGTTACAACCACCACCGTTGAACCAGTGAC GCAGACGACTCCGGTCACAACAACGACCACCGAGCAGGCGGATCTGGATCCACTCAAGGTACAAGGACTCCCGTCGGACCAACGCAAAGACTTCCAGCAGCGTGCCAATCTCCGTCAG CAGGTCGTAAATCGTCCGCTTCCCGCCAACATTGCCCAGCGTCCACTGTTCCCGGTGAGTGGACAACTTC GTGCCCTGCCGGCCGTACGAGGACCTGTATTCCAGCAACAAGTGGCTCAGCAACCGCAGCAAATCCAACCGCAAGCTGTGCCGGCTGAATCCTACGGTCCACCGGAGCAGGAAGAAGAGCAGCAGCAGCCGGAAGAGCTACCCGCCA ]
[+] EMBL BX622250 [ TCCGTCCACAACTGACAATGCATCGATACGTAGCGCTGGTAGCCGTTCTGGTCGTCTCGGTAGCCGCCGAAGCCCCCTATCCCGCATCCGGATGGCGTCCGGAAGGGGCACAGTTCCGCTTGCCAACGGAATACGGTGCACCGTTGCTGTTGCTCCAGCCGCAGCCTCGCCGTGTTGAGGTACAAATTACTCGCGAAAACGTACAGTTTGCAGGGCGTCAGATCGCCCAAGAGCAGGTGCCCGTTACAACCACCACCGTTGAACCAGTGAC GCAGACGACTCCGGTCACAACAACGACCACCGAGCAGGCGGATCTGGATCCACTCAAGGTACAAGGACTCCCGTCGGACCAACGCAAAGACTTCCAGCAGCGTGCCAATCTCCGTCAG CAGGTCGTAAATCGTCCGCTTCCCGCCAACATTGCCCAGCGTCCACTGTTCCCGGTGAGTGGACAACTTC GTGCCCTGCCGGCCGTACGAGGACCTGTATTCCAGCAACAAGTGGCTCAGCAACCGCAGCAAATCCAACCGCAAGCTGTGCCGGCTGAATCCTACGGTCCACCGGAGCAGGAAGAAGAGCAGCAGCAGCCGGAAGAGCTACCCGCCACCACTGAGCAGCCGCAGGTGCCGCAGGACGAAGGCGACGATGACTACGACGAGGATGACGCCGGACGTACGGTGGTGGCCGTTTCCAACGCATTCTCCGGACAGTACTACATTCTGGCACCGGACAACACCCTGCAGCGCGTCATCTACAGTACCATGGTCACGGATGANGATCGTCANGTGAATGGGTTTTCCGCCCAGCTGAAGTACTCACCGGNGGATCCTATCCGCGATCCGGTCTACACGTACGACNAA AAGGACAGC ]
[+] EMBL BX621271 [ TACGTAGCGCTGGTAGCCGTTCTGGTCGTCTCGGTAGCCGCCGAAGCCCCCTATCCCGCATCCGGATGGCGTCCGGAAGGGGCACNGTTCCGCTTGCCAACGGAATACGGTGNACCGTTGCTGTTGCTCCAGCCGCAGCCTCGCCGTGTTGAGGNACAGATTACTCGCGAAAACGTACAGNTTGCAGGGCGTCAGATCGCCCATGAGNAGGTGCCCGTTACAACCACCACCGTTGAACCAGTGAC GCAGACGACTCCGG ]
[+] EMBL BX627381 [ TGAC GCAGACGACTCCGGTCACAACAACGACCACCGAGCAGGCGGATCTGGATCCACTCAAGGTACAAGGACTCCCGTCGGACCAACGCAAAGACTTCCAGCAGCGTGCCAATCTCCGTCAG CAGGTCGTAAATCGTCCGCTTCCCGCCAACATTGCCCAGCGTCCACTGTTCCCGGTGAGTGGACAACTTC GTGCCCTGCCGGCCGTACGAGGACCTGTATTCCAGCAACAAGTGGCTCAGCAACCGCAGCAAATCCAACCGCAAGCTGTGCCGGCTGAATCCTACGGTCCACCGGAGCAGGAAGAAGAGCAGCAGCAGCCGGAAGAGCTACCCGCCACCACTGAGCAGCCGCAGGTGCCGCAGGACGAAGGCGACGATGACTACGACGAGGATGACGCCGGACGTACGGTGGTGGCCGTTTCCAACGCATTCTCCGGACAGTACTACATTCTGGCACCGGACAACACCCTGCAGCGCGTCATCTACAGTACCATGGTCACGGATGAGGATCGTCAGGTGAATGGGTTTTCCGCCCAGCTGAAGTACTCACCGGTGGATCCTATCCGCGATCCGGTCTACACGTACGACGAACAGGGACAGCTGGTTCGCATCTACAAGAAGTGAGAGATGTTTAACGATTCACGGCATTGATGCGTATCTAAAAGCAATGGCTACCTTTTTTGNTAAATATTTTAAAGNTTTTGAGNTTTTG]
consensusID : consensus_7330#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 713 fasta sequence
[CGTTACAACCACCACCGTTGAACCAGTGACGCAGACGACTCCGGTCACAACAACGACCACCGAGCAGGCGGATCTGGATCTACTCAAGGTACAAGGACTCCCGTCGGACCAACGCAAAGACTTCCAGCAGCGTGCCAATCTCCGTCAGCAGGTCGTAAATCGTCCGCTTCCCGCCAACATTGCCCAGCGTCCACTGTTCCCGGTGAGTGGACAACTTCGTGCCCTGCCGGCCGTACGAGGACCTGTATTCCAGCAACAGGTGGCTCAGCAACCGCAAGCTGTGCCGGCTGAAACCTACGGTCCACCGGAGCAGGAAGAAGAGCAGCAGCAGCCGGAAGAGCTACCCGCTACCACTGAGCAGCCTCAGGTGCCGCAAGACGAAGGCGACGATGACTACGACGAGGATGACGCCGGACGTACGGTGGTGGCCGTTTCCAACGCATTCTCCGGGCAGTACTACATTCTGGCACCGGACAACACCCTGCAGCGCGTCATCTACAGTACCATGGTCACGGATGAGGATCGTCAGGTGAATGGGTTTTCCGCCCAGCTGAAGTACTCACCGGTGGATCCTATCCGCGATCCGGTCTACACGTACGACGAACAGGGACAGCTGGTTCGCATCTACNAGAAGTGAGAGATGNTTAACGATTCACGGCATTGATGCGTATCTAAAAGCAATGGCTACCTTTTTTTGTTGAATATTTTAAAGT]
[+] EMBL BX621750 [CGTTACAACCACCACCGTTGAACCAGTGACGCAGACGACTCCGGTCACAACAACGACCACCGAGCAGGCGGATCTGGATCTACTCAAGGTACAAGGACTCCCGTCGGACCAACGCAAAGACTTCCAGCAGCGTGCCAATCTCCGTCAGCAGGTCGTAAATCGTCCGCTTCCCGCCAACATTGCCCAGCGTCCACTGTTCCCGGTGAGTGGACAACTTCGTGCCCTGCCGGCCGTACGAGGACCTGTATTCCAGCAACAGGTGGCTCAGCAACCGCAAGCTGTGCCGGCTGAAACCTACGGTCCACCGGAGCAGGAAGAAGAGCAGCAGCAGCCGGAAGAGCTACCCGCTACCACTGAGCAGCCTCAGGTGCCGCAAGACGAAGGCGACGATGACTACGACGAGGATGACGCCGGACGTACGGTGGTGGCCGTTTCCAACGCATTCTCCGGGCAGTACTACATTCTGGCACCGGACAACACCCTGCAGCGCGTCATCTACAGTACCATGGTCACGGATGAGGATCGTCAGGTGAATGGGTTTTCCGCCCAGCTGAAGTACTCACCGGTGGATCCTATCCGCGATCCGGTCTACACGTACGACGAACAGGGACAGCTGGTTCGCATCTACNAGAAGTGAGAGATGNTTAACGATTCACGGCATTGATGCGTATCTAAAAGCAATGGCTACCTTTTTTTGTTG ]
[+] EMBL BM651099 [ CCGGTCGGACCAACGCAAAGACTTCCAGCAGCGTGCCAATCTCCGTCAGCAGGTCGTAAATCGTCCGCTTCCCGCCAACATTGCCCAGCGTCCACTGTTCCCGGTGAGTGGACAACTTCGTGCCCTGCCGGCCGTACGAGGACCTGTATTCCAGCAACAGGTGGCTCAGCAACCGCAAGCTGTGCCGGCTGAAACCTACGGTCCACCGGAGCAGGAAGAAGAGCAGCAGCAGCCGGAAGAGCTACCCGCTACCACTGAGCAGCCTCAGGTGCCGCAAGACGAAGGCGACGATGACTACGACGAGGATGACGCCGGACGTACGGTGGTGGCCGTTTCCAACGCATTCTCCGGGCAGTACTACATTCTGGCACCGGACAACACCCTGCAGCGCGTCATCTACAGTACCATGGTCACGGATGAGGATCGTCAGGTGAATGGGTTTTCCGCCCAGCTGAAGTACTCACCGGTGGATCCTATCCGCGATCCGGTCTACACGTACGACGAACAGGGACAGCTGGTTCGCATCTACAAGAAGTGAGAGATGTTTAACGATTCACGGCATTGATGCGTATCTAAAAGCAATGGCTACC TTTTTTGTTGAATATTTTAAAGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7330#0 CCCGAGGTTTAGGGTAAGATAATCCGTCCACAACTGACAATGCATCGATACGTAGCGCTG 60
consensus_7330#1 ------------------------------------------------------------
consensus_7330#0 GTAGCCGTTCTGGTCGTCTCGGTAGCCGCCGAAGCCCCCTATCCCGCATCCGGATGGCGT 120
consensus_7330#1 ------------------------------------------------------------
consensus_7330#0 CCGGAAGGGGCACAGTTCCGCTTGCCAACGGAATACGGTGCACCGTTGCTGTTGCTCCAG 180
consensus_7330#1 ------------------------------------------------------------
consensus_7330#0 CCGCAGCCTCGCCGTGTTGAGGTACAAATTACTCGCGAAAACGTACAGTTTGCAGGGCGT 240
consensus_7330#1 ------------------------------------------------------------
consensus_7330#0 CAGATCGCCCAAGAGCAGGTGCCCGTTACAACCACCACCGTTGAACCAGTGACGCAGACG 300
consensus_7330#1 -----------------------CGTTACAACCACCACCGTTGAACCAGTGACGCAGACG 37
*************************************
consensus_7330#0 ACTCCGGTCACAACAACGACCACCGAGCAGGCGGATCTGGATCCACTCAAGGTACAAGGA 360
consensus_7330#1 ACTCCGGTCACAACAACGACCACCGAGCAGGCGGATCTGGATCTACTCAAGGTACAAGGA 97
******************************************* ****************
consensus_7330#0 CTCCCGTCGGACCAACGCAAAGACTTCCAGCAGCGTGCCAATCTCCGTCAGCAGGTCGTA 420
consensus_7330#1 CTCCCGTCGGACCAACGCAAAGACTTCCAGCAGCGTGCCAATCTCCGTCAGCAGGTCGTA 157
************************************************************
consensus_7330#0 AATCGTCCGCTTCCCGCCAACATTGCCCAGCGTCCACTGTTCCCGGTGAGTGGACAACTT 480
consensus_7330#1 AATCGTCCGCTTCCCGCCAACATTGCCCAGCGTCCACTGTTCCCGGTGAGTGGACAACTT 217
************************************************************
consensus_7330#0 CGTGCCCTGCCGGCCGTACGAGGACCTGTATTCCAGCAACAAGTGGCTCAGCAACCGCAG 540
consensus_7330#1 CGTGCCCTGCCGGCCGTACGAGGACCTGTATTCCAGCAACAGGTGGCTCAGC-------- 269
***************************************** **********
consensus_7330#0 CAAATCCAACCGCAAGCTGTGCCGGCTGAATCCTACGGTCCACCGGAGCAGGAAGAAGAG 600
consensus_7330#1 -------AACCGCAAGCTGTGCCGGCTGAAACCTACGGTCCACCGGAGCAGGAAGAAGAG 322
*********************** *****************************
consensus_7330#0 CAGCAGCAGCCGGAAGAGCTACCCGCCACCACTGAGCAGCCGCAGGTGCCGCAGGACGAA 660
consensus_7330#1 CAGCAGCAGCCGGAAGAGCTACCCGCTACCACTGAGCAGCCTCAGGTGCCGCAAGACGAA 382
************************** ************** *********** ******
consensus_7330#0 GGCGACGATGACTACGACGAGGATGACGCCGGACGTACGGTGGTGGCCGTTTCCAACGCA 720
consensus_7330#1 GGCGACGATGACTACGACGAGGATGACGCCGGACGTACGGTGGTGGCCGTTTCCAACGCA 442
************************************************************
consensus_7330#0 TTCTCCGGACAGTACTACATTCTGGCACCGGACAACACCCTGCAGCGCGTCATCTACAGT 780
consensus_7330#1 TTCTCCGGGCAGTACTACATTCTGGCACCGGACAACACCCTGCAGCGCGTCATCTACAGT 502
******** ***************************************************
consensus_7330#0 ACCATGGTCACGGATGANGATCGTCANGTGAATGGGTTTTCCGCCCAGCTGAAGTACTCA 840
consensus_7330#1 ACCATGGTCACGGATGAGGATCGTCAGGTGAATGGGTTTTCCGCCCAGCTGAAGTACTCA 562
***************** ******** *********************************
consensus_7330#0 CCGGNGGATCCTATCCGCGATCCGGTCTACACGTACGACNAA-AAGGACAGCTGGTTCGC 899
consensus_7330#1 CCGGTGGATCCTATCCGCGATCCGGTCTACACGTACGACGAACAGGGACAGCTGGTTCGC 622
**** ********************************** ** * ***************
consensus_7330#0 ATCTACAAGAAGTGAGAGATGTTTAACGATTCACGGCATTGATGCGTATCTAAAAGCAAT 959
consensus_7330#1 ATCTACNAGAAGTGAGAGATGNTTAACGATTCACGGCATTGATGCGTATCTAAAAGCAAT 682
****** ************** **************************************
consensus_7330#0 GGCTACCTTTTTT-GNTAAATATTTTAAAGNTTTTGAGNTTTTG 1002
consensus_7330#1 GGCTACCTTTTTTTGTTGAATATTTTAAAGT------------- 713
************* * * ************
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||